|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1-3288 |
0e+00 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 4248.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1 MAQRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSDPPRMCSA 80
Cdd:PHA03247 1 MARRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSGPPRMCSI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 81 VELPTFLEYPSGRGLRCVFSRLYGEVAFFGKPAPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDEAYLF 160
Cdd:PHA03247 81 VELPTFLEYPSGRGLRCVFSRVYGEVAFFGEPAPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDTAYLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 161 DPHGLREGSPAFVAKIRAGEVYTYLTYYTQEHPEARWAGAMVFFVPAGPGPPATAALTAAVLQLYGASETYLQDEPFVER 240
Cdd:PHA03247 161 DPHGLREGSPAFVAKVRAGEVYTYLTYYTQDHPEARWAGAMVFFVPSGPGPAAPADLTAAALHLYGASETYLQDEPFVER 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 241 RVVVSHPLRGDDVAPAGAVAVGEEAGRAPAAARKAPPQTPPPKAAAPEPAGAADAGVWGAA---LAGAPLALPAPAPSDS 317
Cdd:PHA03247 241 RVVISHPLRGDIAAPAPPPVVGEGADRAPETARGATGPPPPPEAAAPNGAAAPPDGVWGAAlagAPLALPAPPDPPPPAP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 318 AGGDDAEDDEDGAMEVVSPLPRPNQHYPLGFSKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSG 397
Cdd:PHA03247 321 AGDAEEEDDEDGAMEVVSPLPRPRQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSARHAATPFARGPG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 398 GDEQTRPaagpRPPTPASrpptpgapptpgapptpgapptpgapptpagpttassepptpagpttassepptpagpttas 477
Cdd:PHA03247 401 GDDQTRP----AAPVPAS-------------------------------------------------------------- 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 478 sePPTPaGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPtassepptpnpegapapssneqpPAAASTDE 557
Cdd:PHA03247 415 --VPTP-APTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATE-----------------------PAPDDPDD 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 558 ATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAGIAREVTECSRLTINALRSPFPGSPGLLQHCIVFLF 637
Cdd:PHA03247 469 ATRKALDALRERRPPEPPGADLAELLGRHPDTAGTVVRLAAREAAIAREVAECSRLTINALRSPFPASPGLLQHCVIFLF 548
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 638 ERVLAFLIENGARTHAGAGAEGPASGLLDLTVSLLPRRTAVGDFLASTRMTLADVAAHLPLIQPVLDEGSIVGRLALAKL 717
Cdd:PHA03247 549 ERVLAFLIENGARTHAGAGAEGPAAALLDLTLSLLPRRTAVGDFLASTRMTLADVAAHLPLIQPVLDEGSGVGRLALAKL 628
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 718 VLVARDVIRTTDDFHGELAELERRLRATPPTEVYARLSEWLLERSKAGPDTLFAPATPTHPEPLLQRIQALAGFARREEV 797
Cdd:PHA03247 629 VLVARDVIRETDAFHGELAELERQLRATPPAEVYARLSEWLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARGEEI 708
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 798 RAAAEDREVRGALDALARGVDAVARRSGPLTVAAVSPEEPGEGGGRPHPLSPEAIRVRLEQLRADGQKAVEGATREYFHR 877
Cdd:PHA03247 709 RAAAEDREVRGALDALARGVDAVARRAGPLTVAPAPAAPGGQGAPRPPPLSPEAIRVRLEQVRAQGQRAIEGAVKEYFHR 788
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 878 GAVYSAKALLAGDARDRRYHVASAPVVPVVQLLESLPAFDAHVQEVARRARVPAPPPLATSPPAELLRELVQRGRDLEAP 957
Cdd:PHA03247 789 GAVYSAKALLAGDARDRRFHVASAPVVPVVQLLESLPAFDAHVREVAQRARVPAPPPLATSPQAILLRELLQRGQDLEAP 868
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 958 ADLAAWLASLGDAAGQGLVVRKELDELAQAIYKINERTVRRSSGLAELERFEALDAALRGELESEAAFEPGGGDGAAAGG 1037
Cdd:PHA03247 869 ADLAAWLASLGDAAGQGLVERKELDELARAIHKINERQVRRSSGLAELERFEALDAALRQELESEAAFVPAPGAAPYADA 948
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1038 --LPAETRRLAEDALHQAKAMAAAKLTDELSPEARERLAARVRAIEAMLEEARARAEAAKAALARFFQKLQGVLRPLPDF 1115
Cdd:PHA03247 949 ggLSPETRRLAEDALRQAKAMAAAKLTDELSPEARERLRARARAIEAMLEEARERAEAARAARERFFQKLQGVLRPLPDF 1028
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1116 GGLRVAPAVLATLRADIPGGWTCLPDAAQAAPPEVRAALRADLWGLLGQYRGALEHPTADTAAALSGLHPNFAEVLRDLF 1195
Cdd:PHA03247 1029 GGLRAAPAVLATLRADLPGGWTDLPDAAQAAPPEVRAALRADLWGLLGQYREALEHPTPDTATALSGLHPNFVEVLRDLF 1108
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1196 PAAPETPLLVSFFSDHAPRVAQAVSEAIAAGSAAVATASPESTVEAAVRAQGVLADTVAALSPAVRDPACPLAFLVALAD 1275
Cdd:PHA03247 1109 PAAPETPLLVQFFSDHAPRIARAVSEAINAGSAAVATASPESTVDAAVRAHGVLADAVAALSPAVRDPACPLAFLVALAD 1188
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1276 SAAGYVKATRLALGARRAIARLGALGAAAADLAVAVRRENPQADGDRAALLEAAARAVEAARAGLAACEGEFGGLLHAEG 1355
Cdd:PHA03247 1189 SAAGYVKATRLALDARRAIARLGALGAAAADLAVAVRRENPQAEGDRAALLEAAARAVTAAREGLAACEGEFGGLLHAEG 1268
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1356 SAGDPSPSGRALQELGKVVAATRRRADELEAAAADLAEKLADRDARAGRERWAADVEAALDRVENRAEFDAVELRRLQAL 1435
Cdd:PHA03247 1269 SAGDPSPSGRALQELGKVVGATRRRADELEAAAADLAEKMAARRARASRERWAADVEAALDRVENRAEFDAVELRRLQAL 1348
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1436 AAQNKYNPRDFRKRAEQALAANAKTATLALEAAFAFNPYTPENQHHPALPPLAAARRIDWGPAFGAAAETYAEMFRVDTE 1515
Cdd:PHA03247 1349 AATHGYNPRDFRKRAEQALAANAKTATLALEAAFAFNPYTPENQRHPMLPPLAAIHRIDWGPAFGAAAETYAEMFRVDTE 1428
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1516 PLARLLRITGGLLDLAQAGGGFIDYHEAVSRLAEDLNGVPSLRHYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLD 1595
Cdd:PHA03247 1429 PLARLLRLAGGLLELAQAGGGFIDYHEAVSRLAEDLNGVPSLRRYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLD 1508
|
1610 1620 1630 1640 1650 1660 1670 1680
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1596 LAAAAEQTVRLRGDPAAAAELVRTGVTLACPSEDALAACVGALERVDQAPVKDTAYAEHVAFVARRDLGEAKDALVRAKQ 1675
Cdd:PHA03247 1509 LAAAAEQTSRLRNDPAAAAELVRTGVTLACPSEDALAACVGALERVDQSPVKDTAYAEYVAFVARRDLAEAKDALVRAKQ 1588
|
1690 1700 1710 1720 1730 1740 1750 1760
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1676 QRAEATDRVTAALREALAAHERQARSEAESLANLKTLLRVAAIPAAAAKTLEQARSVAEIVDQIELLLEQTEKAAELDQA 1755
Cdd:PHA03247 1589 QRAEATDRVTAALREALAAHERRAQSEAESLANLKTLLRVAAIPATAAKTLDQARSVAEIVDQIELLLEQTEKAAELDVA 1668
|
1770 1780 1790 1800 1810 1820 1830 1840
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1756 AVDWLEHARRVFEAHPLTAARDGSPDPLARLHARLDALGETRRRTAALRRSLEAAEAEWDEVWARFGRARGGAWKSPEAL 1835
Cdd:PHA03247 1669 AVDWLEHARRVFEAHPLTAARGGGPDPLARLHARLDALGETRRRTEALRRSLEAAEAEWDEVWGRFGRVRGGAWKSPEAL 1748
|
1850 1860 1870 1880 1890 1900 1910 1920
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1836 GAAREQLRALQTATNTVLGLVADAHYPRLPAKYQGAIGAKSAERAGAVEELGVAVERHDGLLARLREDVVARVPWEMNAD 1915
Cdd:PHA03247 1749 RAAREQLRALQTATNTVLGLRADAHYERLPAKYQGALGAKSAERAGAVEELGAAVARHDGLLARLREEVVARVPWEMNAD 1828
|
1930 1940 1950 1960 1970 1980 1990 2000
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1916 ALGRLLAEFDALAEDLTPWAVDEFRGARALVQHRLGLYSAYAKARAQtgAGGTPPPAPAPLLVDVRALEARARSPGERHE 1995
Cdd:PHA03247 1829 ALGRLLAEFDALAGDLAPWAVDEFRGARALVQHRLGLYSAYAKARAQ--TGAGGAAPPAPLLVDLRALEARARSPPERHE 1906
|
2010 2020 2030 2040 2050 2060 2070 2080
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1996 PDPRTVRGRGEAYLRARGDPGPLELREATSDLDLPFATSYLTPDGTPLQYVVCFPAVTDKLGALLMRAEAARARPPLPPE 2075
Cdd:PHA03247 1907 PDPRMVRRRGEAYLRASGDPGPLELREATSELDLPFATSYLAPDGTPLQYALCFPAVTDKLGALLMRPEAARARPPLPTE 1986
|
2090 2100 2110 2120 2130 2140 2150 2160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2076 GLDSTQTLAAMCTVPLITQLQLALSDAQGDGFRLFGRFVRHRQPGWRDSAAAAAELYAALTATTLTREFGCRWDELGWER 2155
Cdd:PHA03247 1987 GLESTQTLAAMCTVPLITRLQLALSDAQGAGFRLFGRFVRHRQPAWRDSMAAAAELYAALVATTLTREFGCRWDELGWAR 2066
|
2170 2180 2190 2200 2210 2220 2230 2240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2156 GAPAPAPLAEPAGTRRPRVTFNMNDVMVALVAGTPEHIYNFWRLDLVLQHEYMHLTLPAAWETGAGAILFVQRLTPHPSP 2235
Cdd:PHA03247 2067 GAAAPAPLAEPAGSRRPRVTFNENDVMVALVAGTPEHIYNFWRLDLVLQHEYMHLTLPAAWETGAGSILFVQRLTPHPDP 2146
|
2250 2260 2270 2280 2290 2300 2310 2320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2236 EVRVLPAVAAGPPPATGLLFGTRLADWRHGKLSSSDPLAPWRAAPELAAGGAAAALGGLGGPRALVAVSVLGRMCLPSAA 2315
Cdd:PHA03247 2147 EVRVLPAVPAGPPPATGLLFGTRLADWRHGKLSESDPLAPWRAAPELAAGGAAAALGGLSGPRALVAVSVLGRMCLPSAA 2226
|
2330 2340 2350 2360 2370 2380 2390 2400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2316 LAALWSCMFPEGYSEYDSLDALLAARLGAGRPPDPQGGREDVPAPPAHALYRPSGQRVLVRGGAPDPAARVTVMDLVLAA 2395
Cdd:PHA03247 2227 LAALWSCMFPDGYSEYDSLDALLAARLGSGRTPDPQGGREDSPAPPAHALYRPSGQRVLVRGGAPDPAARVTVMDLVLAA 2306
|
2410 2420 2430 2440 2450 2460 2470 2480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2396 TLLGAPVVVALRSDPAFSKGSELELCVTLFDSRERGADAALREVVSSDVETWATDLLHADLNAIENACLAAQLPALSALI 2475
Cdd:PHA03247 2307 TLLGAPVVVALRSDPAFSRGSELELCVTLFDSRARGADAALREVVSSDVETWAVDLLHADLNPIENACLAAQLPALSALI 2386
|
2490 2500 2510 2520 2530 2540 2550 2560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2476 AARPLAGSPPCLVLVDISMAPLFVLWEQPDPPGPPDVRFVGSDEIEELPFVSPGADVLAGLAAEGDPFFARTILGAPFSL 2555
Cdd:PHA03247 2387 AARPLARSPPCLVLVDISMAPLFVLWEQPDPPGPPDVRFVGSEEIEELPFVSPGGDVLAGLAADGDPFFARTILGAPFSL 2466
|
2570 2580 2590 2600 2610 2620 2630 2640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2556 SRLLHETFPGAPVHRRPPEARFPFAAGAGPDPGGGAPPDPEAPPPPSHQTPAILPDEPVGETVHPRMLTWIRGLEELASD 2635
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRMLTWIRGLEELASD 2546
|
2650 2660 2670 2680 2690 2700 2710 2720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2636 DAGDPPPPLPPAARPAAPDRSVPPPRPAPRPSEPAVQSRARRPDAPPQSARPRTPRDDPGPPAApsTLPPSPPPPAPHPP 2715
Cdd:PHA03247 2547 DAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRG--PAPPSPLPPDTHAP 2624
|
2730 2740 2750 2760 2770 2780 2790 2800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2716 DPPPPDPSPRPNELGGGETaaapsapdppppqtVPAPERPRDDRAPAPGRVSLPRRASRQGRPA-PSSPLQRPRRRAARP 2794
Cdd:PHA03247 2625 DPPPPSPSPAANEPDPHPP--------------PTVPPPERPRDDPAPGRVSRPRRARRLGRAAqASSPPQRPRRRAARP 2690
|
2810 2820 2830 2840 2850 2860 2870 2880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2795 AVGSLTNLADPHPPGPETPTptsptanphattasatpapppvaatgPTRPTSPATPTPTVAAAGRASappapaapAAPAA 2874
Cdd:PHA03247 2691 TVGSLTSLADPPPPPPTPEP--------------------------APHALVSATPLPPGPAAARQA--------SPALP 2736
|
2890 2900 2910 2920 2930 2940 2950 2960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2875 PAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAAPAPAAVPVVVPAPTATLTATTTT 2954
Cdd:PHA03247 2737 AAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA 2816
|
2970 2980 2990 3000 3010 3020 3030 3040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2955 SPAPAATPASPVPTPTSSLPTPPSKPPAFFQPSLATGGSVAPGGDFRRRAPSRPTAAVPAAPSRPPARRLARPAVSRSTE 3034
Cdd:PHA03247 2817 ALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTE 2896
|
3050 3060 3070 3080 3090 3100 3110 3120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 3035 SFALPPDELARPRTPEAPAPPTETEEAPVAERPAPPEPPQGRPPSPAAPDAGPAAASGPSGGVPAPRLGALVPGRVAVPR 3114
Cdd:PHA03247 2897 SFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPR 2976
|
3130 3140 3150 3160 3170 3180 3190 3200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 3115 RQIPPPA-PPREIPAPSPPPPRSHAPRVSSWASSLALHEEPDAGPVSLKQTLWPPDELDDASDDSSLDSDPERLDLGSLD 3193
Cdd:PHA03247 2977 FRVPQPApSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVSLKQTLWPPDDTEDSDADSLFDSDSERSDLEALD 3056
|
3210 3220 3230 3240 3250 3260 3270 3280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 3194 PETDPETDPFAHPPDPRAPEAGDRASPSSYFGPPPLSANAALSRRYVRSTGRSALAVLIEACWRIRRQLRMTRHALLNRS 3273
Cdd:PHA03247 3057 PLPPEPHDPFAHEPDPATPEAGARESPSSQFGPPPLSANAALSRRYVRSTGRSALAVLIEACRRIRRQLRRTRHALLDRS 3136
|
3290
....*....|....*
gi 30984464 3274 GAVLTGLYHVRMLLG 3288
Cdd:PHA03247 3137 GAVLTGLYHVRMLLG 3151
|
|
| PHA03246 |
PHA03246 |
large tegument protein UL36; Provisional |
6-2539 |
0e+00 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223020 [Multi-domain] Cd Length: 3095 Bit Score: 922.84 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 6 DRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGSDPPRMCSAVELPT 85
Cdd:PHA03246 73 DFTIVAVGIRNQFAPDLSPGSSVSCLRSSLAFLRIVFAYGLDTVLSADAIDRLLLQGKDWTIHTSDDGVYTTCVPHDLPN 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 86 FLEYPSGRGLRCV-FSRLYGEVAFF-GKPAPGLLETQCPAHDFFAGPWA-RRPLSYTLVTIGALGMGLYRDGDEAYLFDP 162
Cdd:PHA03246 153 RILSKDPGGNLCVaFSSSYGESEFYlDENTPTILDTQISARTFIERVWKqKRGDIYCLIVIGVLGIGVYRSEDGIYIFDP 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 163 HGLREGSPAFVAKIRAGEVYTYLTYYTQEHPEARWAGAMVFFVPAGPGPPATAALTAAVLQLYGASETYLQ----DEPfv 238
Cdd:PHA03246 233 HGHGHIGQACIVRVSEGYFYQYLTSYADPSGMPDWSATFVYFVSTASSAPPKEEIISAVSRLYGTADIVLDlgraDEE-- 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 239 ERRVVVSHplrgdDVAPagavavgeeagrapaaarkappqtpppkaaapepagaadagvwgaalagaplalpapapsdsa 318
Cdd:PHA03246 311 DNLKVVSA-----DFDP--------------------------------------------------------------- 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 319 ggddaeddedgamevvSPLPRPNQ-HYPLGFSKRR-RPTWTPPSSLEDLSAgrhhpkraslptrtrrsarHAATPF--SR 394
Cdd:PHA03246 323 ----------------PSRPQPWQtKIVIGTADSYaDSSPKLHSESTDLTP-------------------HEHGEYdpST 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 395 GSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAG--PTTASSEPPTPAG 472
Cdd:PHA03246 368 LVGGASTNINISDPPARTDCRRYSEGSVIHESVDSHIEDVTEATSVVAAWSDAFSDISEDYSHLTrpDLPATAHDVSKNG 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 473 PTTASSEPPTPAG---RPPTPAGRPPTpANPTASSEPPT--PAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSS-- 545
Cdd:PHA03246 448 HDTKSDRRSRGSNsrhKRRRPSWTPPS-SSENVSSDGPTfsQSRKPSRKSKRALDLDYGHLSNEPSDVDGENSDSPAGai 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 546 ---------NEQPPAAASTDEATQKALdaLRDRQP--PEPPCGSLTELL--GRHPDTDGGVSRLAAHEAGIarEVTECS- 611
Cdd:PHA03246 527 snipdnvsfNEFISSQARAEDSIEHLS--LRNRPVfnPHTVTGNLDNTLrdSLWNDEYSGSYPLSDISDMI--DDITESi 602
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 612 ----RLTINaLRSPFPGSPGLLQHCIVFLFERVLAFLIENGARTHAGAGAEGPASgLLDLTVSLlPRRTAVGDFLASTRM 687
Cdd:PHA03246 603 adgmRLVVH-TSHRGDYDGGLLDVCIMDVFTRLFNYIIENGARTTTDRASVVEPE-MAALTKAF-TTPSHFSTFISSTGM 679
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 688 TLADVAAHLPLIQPVLDEGSIVGRLALAKLVLVARDVIRTTDDFHGELAELERRLRATPPTEVYARLSEWLLERSKAGPD 767
Cdd:PHA03246 680 SLSEASESADLIESVLTENSKIGKLALSKLTLVALEVEEATDTLHKSLDAIEREASTADPDRIYERMATVLVDTFYRNSG 759
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 768 TLFAPATPTHPE-PLLQRIQALAGFARREEVRAAAEDREVRGALDALARGVDAVARRSGPLTVAAVSPEEPGEGGGRPHP 846
Cdd:PHA03246 760 KLYSETTSYNSDqTLTDRVVSLCEFIRDRENVATRKAELILAEIEALDAGVRWMNTKFDAFIMGGSGGMSPAKGLSAIAK 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 847 LSPEAIRVRLEQLRADGQKAVEGATREYFHRGAVYSAKALLAGDARDRRYH-VASAPVVPVVQLLESLPAFDAHVQEVAR 925
Cdd:PHA03246 840 TSTDVVTQRLESIGKAAIDIVGNALREYYLKCALYSAKALRADMKETSRFKiVVTEQLEKMTRLLSSLSVIDDVILLIAS 919
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 926 RARVPAPPPLATSPPAELLRELVQRGRDLEAPADLAAWLASLGDAAGQGLVVRKELDELAQAIYKINERTVRRSSGLAEL 1005
Cdd:PHA03246 920 RSDARVPVPVSKALESQLLGDLLEIGSHLDVPENLVTWKGLMVSVQTGGWISRRELDLLLKEVDAVNDNAARRETALTEL 999
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1006 ERFEALDAALRGELESEAAFEPGGGDgaaagglpaETRRLAEDALHQAKAMAAAKLTDELSPEARERLAARVRAIEAMLE 1085
Cdd:PHA03246 1000 ERLHELESRIASYTDLETTVDLQKLD---------EALKLANSIVKLTKGLDGAKLASSLSSDIREKIRQKRSETETLIA 1070
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1086 EARARAEAAKAALARFFQKLQGVLRPLPDFGGLRVAPAVLATLRADIPGGWTCLPDAAQAAPPEVRAALRADLWGLLGQY 1165
Cdd:PHA03246 1071 RLSARYAEVKAAVDGLYSSIRKLLRPLQNFAGLRALDSTVKTITDSIPPGMGSFESFLASAPPDVIGALRSDLWVLFTQY 1150
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1166 RGALEHPTADTAAALSGLHPNFAEVLRDLFPAAPETPLLVSFFSDHAPRVAQAVSEAIAAGSAAVATASPESTVEAAV-- 1243
Cdd:PHA03246 1151 KTILSRPSTGTAAELSGLGGPFALAIRVILGPEGEYPAASVFFGKHADVLSAALAAAASEPMSVEKTSAAVSVLKEAIsd 1230
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1244 --RAQGVLADT-VAALSPAVRDPAcpLAFLVAL---ADSAAGYVKATRLALGARRAIARLGALGAAAADLAVAVRRENPQ 1317
Cdd:PHA03246 1231 inRADATIPQQgIMADLSTERADA--FSFLHALlsdAEGAADVASRGAYLSTLIRTVRDSLEAVIDSITKIKSLDPKTYT 1308
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1318 ADGDRAAlleaaaraveaaragLAACEGEFGgllHAEGSAGDPSPSGRALQ---------------ELGKVVAATRRRAD 1382
Cdd:PHA03246 1309 YNTDASV---------------IVSAKAEVS---AATQQAGDCKDALTALEnepltynphiqrkiaELNKLIESVNQRVG 1370
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1383 ELEAAAADLAEKLADRDARAGRERWAADVEAALDRVENRAEFDAVELRRLQALAAQNKYNPRDFRKRAEQALAANAKTAT 1462
Cdd:PHA03246 1371 ELDIALQTYERNRISAERSRSEDLWTSSITSLLVNAEIKSEFDAMEINSLEETARNAGYDTIRFKSRAEKIVSAHARVVE 1450
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1463 LALEAAFAFNPYTPENQHHPALPPLAAARRIDWGPAFGAAAETYAEMFRVDTEPLARLLRITGGLLDLAQAGGGFIDYHE 1542
Cdd:PHA03246 1451 NAIETVLKFNPYSTTNIIHGLKPPIAALKNITWGDAFFAAAPYYTKLFGVNCDVLISLLKILFAILRHASAHPGNLDYYF 1530
|
1610 1620 1630 1640 1650 1660 1670 1680
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1543 AVSRLAEDLNGVPSLRHYVPFFRRGHAEYLELCDRLDALRADVHRALGGVPLDLAAAAEQTVRLRgDPAAAAELVRTGVT 1622
Cdd:PHA03246 1531 LVGEIESDLRAIPSLAKYVDFYRRGHDSFEGFLARLEQMRVEALHASGRVSIEISDALETLARTH-SPEGARRALEYGVS 1609
|
1690 1700 1710 1720 1730 1740 1750 1760
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1623 LACPSEDALAACVGALERVDQAPVKDTAYAEHVAFVARRDLGEAKDALVRAKQQRAEATDRVTAALREALAAHERQARSE 1702
Cdd:PHA03246 1610 IVIPSANTIMSIADALQKEKITELDGTAYAEYSAHILRRDNDAIKSITQRVTTAIEAAKSRGESILKDLAEASYAADRET 1689
|
1770 1780 1790 1800 1810 1820 1830 1840
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1703 AESLANLKTLLRVAAIPAAAAKTLEQARSVAEIVDQIELLLEQTEKAAELDQAAVDWLEHARRVFEAHPLTAARDGSpDP 1782
Cdd:PHA03246 1690 AEQLANLKNLLRLVAMPAHIAKAIDKAETANDIVTQAALLLTKVEETKELDTQTVEWLKHAESVIDSHDLTVRIDES-GP 1768
|
1850 1860 1870 1880 1890 1900 1910 1920
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1783 LARLHARLDALGETRRRTAALRRSLEAAEAEWDEVWARFGRARGGAWKSPEALGAAREQLRALQTATNTVLGLVADAHYP 1862
Cdd:PHA03246 1769 MTIYAERIDALVRLENRLAELKSELALAEVAWDDTWSTFIHDKDRIDKSSEGFSAARESAARAKVSTNAINALRNNAEYN 1848
|
1930 1940 1950 1960 1970 1980 1990 2000
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1863 RLPAKYQGAIGAKSAERAGAVEELGVAVERHDGLLARLrEDVVARVPWEMNADALGRLLAEFDALAEDLTPWAVDEFRGA 1942
Cdd:PHA03246 1849 RLPAKIIGLIDSKYRDRTVVLDAFLDSMKEIEDTQKQM-EILCSKIPLTFSLNDLRAISSQFDDIAKRLPKWYVKQVGRY 1927
|
2010 2020 2030 2040 2050 2060 2070 2080
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1943 RALVQHRLGLYSAYAKAraqtgaGGTPPPAPAPLLVDVRALEArarspGERHEPDPRTV----RGRGEAYLRARgdpGPL 2018
Cdd:PHA03246 1928 SRLIKLRLALYAAYSNA------STGPIGDPPLLPFDTGRANI-----AANMAPSVGLVdrylKHRVAAWIRPK---VVA 1993
|
2090 2100 2110 2120 2130 2140 2150 2160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2019 ELREATSDLDLPFATSYLTPDGTPLQYVVCFPAVTDKLGALLMRAEAARARPPLPPEGLDSTQTLAAMCTVPLITQLQLA 2098
Cdd:PHA03246 1994 TLQEAFSEIDMPGLTTYLDSTDTPLRYSICYRTVGEKLAACLCEPSAVNIKPRIPTNLISTVEMESAAGMLNDIMILRLG 2073
|
2170 2180 2190 2200 2210 2220 2230 2240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2099 LSDAQGDGFRLFGRFVRHRQPGW--RDSAAAAAELYAALTATTLTREFGCRWDELGWERGAPAPAPLA------EPAGTR 2170
Cdd:PHA03246 2074 FVQACADRFQLFTKYVRTGIHDWspDYCIKAHGTIYCALIAITLTRKTGSNLSDIYFIPGQYGPTIDKkelkkfAANGRR 2153
|
2250 2260 2270 2280 2290 2300 2310 2320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2171 RPRVTFNMNDVMVALVAGTPEHIYNFWRLDLVLQHEYMHLTLPAAWETGAGAILFVQRLTPH------PSPEVRVLPAVA 2244
Cdd:PHA03246 2154 RQVVRLDPADVMVTIMACTPGHVLTFSKLDLINQYDFMDKTLYNVLTDSISTVAFVNCLSTQlskdgkVDPNCRPLSLTG 2233
|
2330 2340 2350 2360 2370 2380 2390 2400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2245 AGPPPATGLLFGTRLADWRHGKLSSSDPLAPWRAApELAAGGAAAALGGLGGPRALVAVSVLGRMCLPSAALAALWSCMF 2324
Cdd:PHA03246 2234 GEWDPSGGSLFAIRYSDWKQGRLSDTDPLKPWEDI-SGDEGAGLAKIRAVVPSSLLTTTTVLARMCIPPTALAVMWSSLL 2312
|
2410 2420 2430 2440 2450 2460 2470 2480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2325 PEGYSEY-DSLDALLAARLGAGRPPDPQGGREDVPA-------PPAHALYRPSGQRV--LVRGGAPDPAARVTVMDLVLA 2394
Cdd:PHA03246 2313 PDGIEQTcKSYDDVVTARGDGASTLDVTTSTIDHTGvkniqtnLDCPNLYEYTGTATtfTVVSTPPSRVLKVNAMDIAAC 2392
|
2490 2500 2510 2520 2530 2540 2550 2560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 2395 ATLLGAPVVVALRSDPAFSKGSELELCVTLFDSRErGADAALRE--VVSSDVETWATDLLHADLNAIENACLAAQLPALS 2472
Cdd:PHA03246 2393 ATLFGARIVIAAECPEAYSSDSGLSLCIRLFDSRS-GSKGCFLEpgAVSSDITSWGAKLLAADSNPIENACLGQQLEHLS 2471
|
2570 2580 2590 2600 2610 2620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 2473 ALIAARPLAGSPPCLVLVDISMAPLFVLWEQPDPPGPPDVRFVGSDE--IEELPFVSPGADVLAGLAAE 2539
Cdd:PHA03246 2472 HLIASKPLSSAPPCLVIVDAGMVPVKVLWAKEELDPIPIIRLTSADDalISELPYIDAGIRGETGADFQ 2540
|
|
| Herpes_UL36 |
pfam03586 |
Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest ... |
1405-1654 |
1.49e-92 |
|
Herpesvirus UL36 tegument protein; The UL36 open reading frame (ORF) encodes the largest herpes simplex virus type 1 (HSV-1) protein, a 270-kDa polypeptide designated VP1/2, which is also a component of the virion tegument. A null mutation in the UL36 gene of herpes simplex virus type 1 results in accumulation of unenveloped DNA-filled capsids in the cytoplasm of infected cells. This family only covers a small central part of this large protein.
Pssm-ID: 427378 [Multi-domain] Cd Length: 251 Bit Score: 301.01 E-value: 1.49e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1405 ERWAADVEAALDRVENRAEFDAVELRRLQALAAQNKYNPRDFRKRAEQALAANAKTATLALEAAFAFNPYTPENQHhpAL 1484
Cdd:pfam03586 3 ERWRSDIRALLERDEDDGEFDLDELDRLRDEAETGGYDAVDLIKRARQVVDARAQLGLRALETVFAFNPYTPQNSQ--AL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1485 PPLAAARRIDWGPAFGAAAETYAEMFRVDTEPLARLLRITGGLLDLAQAG-GGFIDYHEAVSRLAEDLNGVPSLRHYVPF 1563
Cdd:pfam03586 81 PPLALLESITWIDAFPGAADTYTYLFGVSVEKLKALLRIGEEILEAADAAnDGNIDYHAFVLTLSGDLFQVPALTEYVDF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 1564 FRRGHAEYLELCDRLDALRADVHRALGGVPLDLAAAAEQTVRLRGDPAAAAELVRTGVTLACPSEDALAACVGALERVDQ 1643
Cdd:pfam03586 161 YVRSYELFLDIRAALAELRADARGALGRVALEQLAALEEAAEVRRDPEAAKEALERGVRITLPSEDALTAMREGLKLEDK 240
|
250
....*....|.
gi 30984464 1644 APVKDTAYAEH 1654
Cdd:pfam03586 241 KQFEGTAYLEY 251
|
|
| Herpes_teg_N |
pfam04843 |
Herpesvirus tegument protein, N-terminal conserved region; |
15-185 |
8.20e-40 |
|
Herpesvirus tegument protein, N-terminal conserved region;
Pssm-ID: 428153 [Multi-domain] Cd Length: 159 Bit Score: 145.98 E-value: 8.20e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 15 RNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAW--TRASAGSDPPR-MCSAVELPTFLEYPS 91
Cdd:pfam04843 2 RHQFDCKFGPAAGSQCLSNCLSFLVSSYLNGIRPVLSREALDGILEEGARLdaLLRTSGMLPPRqYAQLHELPGYVRTGA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 92 GRGLRCVFSRLYGEVA------FFGKPApglletqcpahdffagpwarrplsYTLVTIGALGMGLYRDGDEAYLFDPHGL 165
Cdd:pfam04843 82 WGCKIRRSSEIYGLLGhelsrnFNGTPQ------------------------YCLITCGSLAGAIVIKGKTYYLFDPHCT 137
|
170 180
....*....|....*....|..
gi 30984464 166 REG--SPAFVAKIRAGEVYTYL 185
Cdd:pfam04843 138 PEGnsTAAVIVTVSAGDVYEYL 159
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
455-608 |
6.35e-13 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 74.95 E-value: 6.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPT--TASSEPPTPAG------PTTASSEP---------------------PTPAGRPPTPAGRPPTP-------- 497
Cdd:pfam05109 461 PASTGPTvsTADVTSPTPAGttsgasPVTPSPSPrdngteskapdmtsptsavttPTPNATSPTPAVTTPTPnatsptlg 540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 498 -ANPTASSEPPTPAGRPPTPAGRPPTP---------ANPTASSEPPTPNpegAPAPSSNEQPPAAASTDEATQKALDALR 567
Cdd:pfam05109 541 kTSPTSAVTTPTPNATSPTPAVTTPTPnatiptlgkTSPTSAVTTPTPN---ATSPTVGETSPQANTTNHTLGGTSSTPV 617
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30984464 568 DRQPPEPPCGSLTEllGRHPDTDGGVSRLAAHEAGIAREVT 608
Cdd:pfam05109 618 VTSPPKNATSAVTT--GQHNITSSSTSSMSLRPSSISETLS 656
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
455-574 |
8.25e-13 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 74.38 E-value: 8.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPA-GPTTASSEPPTPAGRPPTPAGRPPTPAN-PT-ASSEPPTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PHA03269 27 PIPELHTSAATQKPDPApAPHQAASRAPDPAVAPTSAASRKPDLAQaPTpAASEKFDPAPAPHQAASRAPDPAVAPQLAA 106
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 30984464 532 PPTPNPEGAPAPSSNEQP-PAAASTDEATQKALDALRDRQPPEP 574
Cdd:PHA03269 107 APKPDAAEAFTSAAQAHEaPADAGTSAASKKPDPAAHTQHSPPP 150
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
455-563 |
5.13e-11 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 68.22 E-value: 5.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAgPTTASSEPPTPA-GPTTASSEPPTPAGRPPTPAGRPPTPA-NPT-ASSEPPTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PHA03269 42 PAPA-PHQAASRAPDPAvAPTSAASRKPDLAQAPTPAASEKFDPApAPHqAASRAPDPAVAPQLAAAPKPDAAEAFTSAA 120
|
90 100 110
....*....|....*....|....*....|..
gi 30984464 532 PPTPNPEGAPAPSSNEQPPAAASTDEATQKAL 563
Cdd:PHA03269 121 QAHEAPADAGTSAASKKPDPAAHTQHSPPPFA 152
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
451-534 |
7.56e-10 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 64.75 E-value: 7.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPA-GPTTASSEPPTPA-GPTTASSEPPTPAGRPPTPAGRPPTPANP--TASSEPPTPAGRPPTPAGRPPTPANP 526
Cdd:PHA03269 64 ASRKPDLAqAPTPAASEKFDPApAPHQAASRAPDPAVAPQLAAAPKPDAAEAftSAAQAHEAPADAGTSAASKKPDPAAH 143
|
....*...
gi 30984464 527 TASSEPPT 534
Cdd:PHA03269 144 TQHSPPPF 151
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
451-552 |
2.22e-09 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 63.21 E-value: 2.22e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPA-GPTTASSEPPTPA-GPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTP-AGRPPTPAG-RPPTPANP 526
Cdd:PHA03269 50 ASRAPDPAvAPTSAASRKPDLAqAPTPAASEKFDPAPAPHQAASRAPDPAVAPQLAAAPKPdAAEAFTSAAqAHEAPADA 129
|
90 100
....*....|....*....|....*.
gi 30984464 527 TASSEPPTPNPegaPAPSSNEQPPAA 552
Cdd:PHA03269 130 GTSAASKKPDP---AAHTQHSPPPFA 152
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
455-614 |
2.25e-09 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 63.19 E-value: 2.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTAssePPTPAGRPPTPAGRPPTPANPTASSEPPTP-AGRPPTPAGRPPTPANPTASSEPP 533
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAA---APAAAPVAQAAAAPAPAAAPAAAASAPAAPpAAAPPAPVAAPAAAAPAAAPAAAP 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 534 TPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSL--TELlgrHPDTDGGVSRLAAHEA--GIAREVTE 609
Cdd:PRK14951 443 AAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLtpTEE---GDVWHATVQQLAAAEAitALARELAL 519
|
....*
gi 30984464 610 CSRLT 614
Cdd:PRK14951 520 QSELV 524
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
468-553 |
1.13e-08 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 61.44 E-value: 1.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 468 PTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNE 547
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
....*....
gi 30984464 548 QP---PAAA 553
Cdd:PRK12270 118 TPlrgAAAA 126
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
455-575 |
1.24e-08 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 61.24 E-value: 1.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTT--------ASSEPPtPAGPTTAS--SEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPA 524
Cdd:PHA03378 676 PSPTGANTmlpiqwapGTMQPP-PRAPTPMRppAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRA 754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 30984464 525 NPTASSEPPTPNPEGAPAPSSNEQPPAAASTdeATQKALDALRDRQPPEPP 575
Cdd:PHA03378 755 RPPAAAPGRARPPAAAPGAPTPQPPPQAPPA--PQQRPRGAPTPQPPPQAG 803
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
488-594 |
2.04e-08 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 60.13 E-value: 2.04e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 488 PTPAgrPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQP-PAAASTDEATQK----- 561
Cdd:PHA03269 23 NTNI--PIPELHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFdPAPAPHQAASRApdpav 100
|
90 100 110
....*....|....*....|....*....|....*.
gi 30984464 562 --ALDALRDRQPPEPPCGSLTellgRHPDT-DGGVS 594
Cdd:PHA03269 101 apQLAAAPKPDAAEAFTSAAQ----AHEAPaDAGTS 132
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
451-540 |
2.27e-08 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 59.82 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPtpagrPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:PRK14950 372 TAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATP-----PPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTP 446
|
90
....*....|
gi 30984464 531 EPPTPNPEGA 540
Cdd:PRK14950 447 PAPPKEEEKA 456
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
366-573 |
2.44e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 60.00 E-value: 2.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 366 SAGRHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASrpptPGAPPTPGAPPTPGAPPTPGAPPTPA 445
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEAS----AAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 446 GPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEP-PTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPA 524
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPaPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPD 746
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 30984464 525 NPTASSEPP--TPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPE 573
Cdd:PRK07764 747 DPPDPAGAPaqPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDED 797
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
487-575 |
3.22e-08 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 59.44 E-value: 3.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 487 PPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDAL 566
Cdd:PRK14950 363 VPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKP 442
|
....*....
gi 30984464 567 RDRQPPEPP 575
Cdd:PRK14950 443 KYTPPAPPK 451
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
386-602 |
3.41e-08 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 59.50 E-value: 3.41e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 386 RHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTA-- 463
Cdd:PRK12323 359 RMLAFRPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAArq 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 464 --SSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAP 541
Cdd:PRK12323 439 asARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAP 518
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 30984464 542 APSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAG 602
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDG 579
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
349-568 |
3.76e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 59.23 E-value: 3.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 349 SKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGA 428
Cdd:PRK07764 592 PGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPA 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 429 PPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 508
Cdd:PRK07764 672 KAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDP 751
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 509 PAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRD 568
Cdd:PRK07764 752 AGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEE 811
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
454-571 |
3.83e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 59.23 E-value: 3.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPT---PAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRP-PTPANPTAS 529
Cdd:PRK07764 399 PSAAAAAPAAAPAPAAAAPAAAAAPAPAAapqPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPaPAAAPEPTA 478
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 30984464 530 SEPPTPNPEGAPAPSsnEQPPAAASTDEATQkALDALRDRQP 571
Cdd:PRK07764 479 APAPAPPAAPAPAAA--PAAPAAPAAPAGAD-DAATLRERWP 517
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
384-575 |
1.36e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 57.69 E-value: 1.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 384 SARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTA 463
Cdd:PRK07764 594 AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKA 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 464 SSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAP 543
Cdd:PRK07764 674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753
|
170 180 190
....*....|....*....|....*....|..
gi 30984464 544 SSNEQPPAAASTDEATQKALDALRDRQPPEPP 575
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEM 785
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
454-566 |
1.58e-07 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 57.38 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEP-PTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEP-PTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PHA03378 710 PPGRAQRPAAATGRaRPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRaRPPAAAPGAPTPQPPPQAPPAPQQR 789
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 30984464 532 P-----PTPNPEGAPAPSSnEQPPAAASTDEATQKALDAL 566
Cdd:PHA03378 790 PrgaptPQPPPQAGPTSMQ-LMPRAAPGQQGPTKQILRQL 828
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
385-572 |
1.74e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 57.19 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 385 ARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTAS 464
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 465 SEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPT------------ASSEP 532
Cdd:PRK12323 455 AAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAApagwvaesipdpATADP 534
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 30984464 533 PTPNPEGAPAPSSNEQPPAAASTDE-ATQKALDALRDRQPP 572
Cdd:PRK12323 535 DDAFETLAPAPAAAPAPRAAAATEPvVAPRPPRASASGLPD 575
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
480-559 |
2.56e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 56.82 E-value: 2.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 480 PPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEAT 559
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
455-592 |
2.57e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 56.53 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 534
Cdd:PRK07764 615 PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPA 694
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 30984464 535 PNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGG 592
Cdd:PRK07764 695 GAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPA 752
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
452-576 |
2.67e-07 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 55.73 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTASSEPptpAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPP-TPAGRPPTPANPTASS 530
Cdd:PHA03291 173 AAPPLGEGSADGSCDP---ALPLSAPRLGPADVFVPATPRPTPRTTASPETTPTPSTTTSPPStTIPAPSTTIAAPQAGT 249
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 30984464 531 EPPTPNPEGAPAPSSNEQPPAAAS-TDEATQKALDALRDRQPPEPPC 576
Cdd:PHA03291 250 TPEAEGTPAPPTPGGGEAPPANATpAPEASRYELTVTQIIQIAIPAS 296
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
461-553 |
5.06e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.59 E-value: 5.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEP----PTPAGRPPTPAGRPPTPANPTAssEPPTPAGRPPTPAGRPPTPANPTASSEPPTPN 536
Cdd:PRK14950 359 LLVPVPAPQPAKPTAAAPSPvrptPAPSTRPKAAAAANIPPKEPVR--ETATPPPVPPRPVAPPVPHTPESAPKLTRAAI 436
|
90
....*....|....*..
gi 30984464 537 PEGAPAPSSNEQPPAAA 553
Cdd:PRK14950 437 PVDEKPKYTPPAPPKEE 453
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
452-606 |
5.86e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.27 E-value: 5.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPA-NPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30984464 531 EPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTELLGRHPDTDG-GVSRLAAHEAGIARE 606
Cdd:PRK12323 463 RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAeSIPDPATADPDDAFE 539
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
403-568 |
6.20e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 55.63 E-value: 6.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 403 RPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAG---------PTTASSEPPTPAGP 473
Cdd:PRK07003 380 VPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATAdrgddaadgDAPVPAKANARASA 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 474 TTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRP-PTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAA 552
Cdd:PRK07003 460 DSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPsAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAA 539
|
170
....*....|....*....
gi 30984464 553 ASTDE---ATQKALDALRD 568
Cdd:PRK07003 540 AAPAAragGAAAALDVLRN 558
|
|
| FAP |
pfam07174 |
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ... |
454-523 |
7.89e-07 |
|
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.
Pssm-ID: 429334 Cd Length: 301 Bit Score: 53.78 E-value: 7.89e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTP 523
Cdd:pfam07174 42 EPAPPPPSTATAPPAPPPPPPAPAAPAPPPPPAAPNAPNAPPPPADPNAPPPPPADPNAPPPPAVDPNAP 111
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
451-628 |
8.16e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.88 E-value: 8.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPT--PAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTA 528
Cdd:PRK12323 400 AAPPAAPAAAPAAAAAARAVAAAPARRSPAPEalAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAA 479
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 529 ssePPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALrDRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAGIAREVT 608
Cdd:PRK12323 480 ---PARAAPAAAPAPADDDPPPWEELPPEFASPAPAQP-DAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAA 555
|
170 180
....*....|....*....|
gi 30984464 609 ECSRLTinALRSPFPGSPGL 628
Cdd:PRK12323 556 ATEPVV--APRPPRASASGL 573
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
451-529 |
9.67e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 9.67e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTAS 529
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
393-575 |
9.79e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 9.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 393 SRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAG 472
Cdd:PRK07764 591 APGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWP 670
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 473 PTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTP-NPEGAPAPSSNEQPPA 551
Cdd:PRK07764 671 AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPaADDPVPLPPEPDDPPD 750
|
170 180
....*....|....*....|....
gi 30984464 552 AASTDEATQKALDALRDRQPPEPP 575
Cdd:PRK07764 751 PAGAPAQPPPPPAPAPAAAPAAAP 774
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
455-575 |
2.00e-06 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 53.92 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEP----PTPAGPTTasSEPPTPAGRPPTPAGRPPTPANPTASsePPTPAGRPPTPAGR-PPTPANPTAS 529
Cdd:PHA03378 659 ITPYKPTWTQIGHipyqPSPTGANT--MLPIQWAPGTMQPPPRAPTPMRPPAA--PPGRAQRPAAATGRaRPPAAAPGRA 734
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 30984464 530 SEP---PTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPP 575
Cdd:PHA03378 735 RPPaaaPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAP 783
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
470-534 |
2.18e-06 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 53.15 E-value: 2.18e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30984464 470 PAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 534
Cdd:PTZ00144 125 PAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| Streccoc_I_II |
NF033804 |
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ... |
453-552 |
2.76e-06 |
|
antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.
Pssm-ID: 411384 [Multi-domain] Cd Length: 1552 Bit Score: 53.40 E-value: 2.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 453 EPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAgRPPTPANPTASSEP---PTPAG-------RPPTPAGRPPT 522
Cdd:NF033804 876 EPSKPEEPTYETEKPLEPAPVAPTYENEPTPPVKTPDQP-EPSKPEEPTYETEKplePAPVApsyenepTPPVKTPDQPE 954
|
90 100 110
....*....|....*....|....*....|
gi 30984464 523 PANPTASSEPPTPNPEGAPAPSSNEQPPAA 552
Cdd:NF033804 955 PSKPVEPTYDPLPTPPVAPTPKQLPTPPAV 984
|
|
| FAP |
pfam07174 |
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ... |
461-550 |
3.24e-06 |
|
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.
Pssm-ID: 429334 Cd Length: 301 Bit Score: 51.85 E-value: 3.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEPPtPAGRPPTPAGRPPTPANPTA--SSEPPTPAGRPPTPAGRPPTPANPTASSEPPT-PNP 537
Cdd:pfam07174 22 AVAGASAVAVALPAVAHADPE-PAPPPPSTATAPPAPPPPPPapAAPAPPPPPAAPNAPNAPPPPADPNAPPPPPAdPNA 100
|
90
....*....|...
gi 30984464 538 EGAPAPSSNEQPP 550
Cdd:pfam07174 101 PPPPAVDPNAPEP 113
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
454-535 |
4.19e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 4.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPP 533
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117
|
..
gi 30984464 534 TP 535
Cdd:PRK12270 118 TP 119
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
470-575 |
4.80e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 52.68 E-value: 4.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 470 PAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQP 549
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100
....*....|....*....|....*.
gi 30984464 550 PAAASTDEATQKALDALRDRQPPEPP 575
Cdd:PRK07764 466 PAPAPAAAPEPTAAPAPAPPAAPAPA 491
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
455-602 |
5.18e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 52.30 E-value: 5.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGrPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEP-P 533
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAA-PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGdG 668
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 534 TPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAG 602
Cdd:PRK07764 669 WPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADD 737
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
397-598 |
7.46e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.91 E-value: 7.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 397 GGDEQTRPAAGPRPPTPASRPPTPGAPPTPGapptpgapptpgapptpagpTTASSEPPTPAGPTTASSEPPTPAGPTTA 476
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPA--------------------APAAPAAPAPAGAAAAPAEASAAPAPGVA 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 477 SSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTD 556
Cdd:PRK07764 649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 30984464 557 EATQKALDALRDRQPPEPPCGSLTELLGRHPDTDGGVSRLAA 598
Cdd:PRK07764 729 SAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAP 770
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
353-578 |
9.81e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 9.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 353 RPTWTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSR---GSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAP 429
Cdd:PHA03307 193 PPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGAsssDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEA 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 430 PTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGP------------TTASSEPPTPAGRPPTPA-GRPPT 496
Cdd:PHA03307 273 SGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSsssssresssssTSSSSESSRGAAVSPGPSpSRSPS 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 497 PANPTASSEPPTPAGRPPtPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPA-----AASTDEATQKALDALRDRQP 571
Cdd:PHA03307 353 PSRPPPPADPSSPRKRPR-PSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRfpagrPRPSPLDAGAASGAFYARYP 431
|
....*..
gi 30984464 572 PEPPCGS 578
Cdd:PHA03307 432 LLTPSGE 438
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
356-569 |
1.03e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 51.46 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 356 WTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSGgdeqTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAP 435
Cdd:pfam05109 439 FAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAG----TTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVT 514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 436 PTPGAPPTPAGPTtaSSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPT--PANPTASSEPPTPAGRP 513
Cdd:pfam05109 515 TPTPNATSPTPAV--TTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTlgKTSPTSAVTTPTPNATS 592
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 30984464 514 PTpAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDR 569
Cdd:pfam05109 593 PT-VGETSPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTSSMSLR 647
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
451-574 |
1.05e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 51.61 E-value: 1.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRP--PTPAGRPPTPANPTA 528
Cdd:PTZ00449 517 SGLPPKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVGKKPGPAKEHKPSKIPTLSKKPefPKDPKHPKDPEEPKK 596
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 30984464 529 SSEPPTPN-PEGAPAPssneQPPAAASTDEATQKALDALRDRQPPEP 574
Cdd:PTZ00449 597 PKRPRSAQrPTRPKSP----KLPELLDIPKSPKRPESPKSPKRPPPP 639
|
|
| PLN02217 |
PLN02217 |
probable pectinesterase/pectinesterase inhibitor |
451-554 |
1.30e-05 |
|
probable pectinesterase/pectinesterase inhibitor
Pssm-ID: 215130 [Multi-domain] Cd Length: 670 Bit Score: 50.86 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTP-AGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTAS 529
Cdd:PLN02217 563 AGNPGSTNSTPTGSAASSNTTFSSDSPSTVVAPSTSPPAGhLGSPPATPSKIVSPSTSPPASHLGSPSTTPSSPESSIKV 642
|
90 100
....*....|....*....|....*
gi 30984464 530 SEPPTPNPEGAPAPSSNEQPPAAAS 554
Cdd:PLN02217 643 ASTETASPESSIKVASTESSVSMVS 667
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
464-549 |
2.88e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 49.96 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 464 SSEPPTPAGPTTASSEPPTPAgrPPTPAGRPPTPANPTASSEPPTPAGRPPTPAgrppTPANPTASSEPPTPNPEGAPAP 543
Cdd:PRK14948 515 GSASNTAKTPPPPQKSPPPPA--PTPPLPQPTATAPPPTPPPPPPTATQASSNA----PAQIPADSSPPPPIPEEPTPSP 588
|
....*.
gi 30984464 544 SSNEQP 549
Cdd:PRK14948 589 TKDSSP 594
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
337-574 |
3.41e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.85 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 337 LPRPNQHYPLGFSKRRRPTWTPPSSLedlSAGRHHPKRASLPTRTRRSARHAATPfsRGSGGDEQTRPAAGPRPPTPASR 416
Cdd:PRK07003 380 VPAPGARAAAAVGASAVPAVTAVTGA---AGAALAPKAAAAAAATRAEAPPAAPA--PPATADRGDDAADGDAPVPAKAN 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 417 PPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPT--PAGPTTASSEPPTPAGRPPTPAGRP 494
Cdd:PRK07003 455 ARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVpdARAPAAASREDAPAAAAPPAPEARP 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 495 PTPANPTA----------------------SSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPeGAPAPSSNEQPPAA 552
Cdd:PRK07003 535 PTPAAAAPaaraggaaaaldvlrnagmrvsSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQVPTP-RARAATGDAPPNGA 613
|
250 260
....*....|....*....|..
gi 30984464 553 ASTDEATQkaldalrDRQPPEP 574
Cdd:PRK07003 614 ARAEQAAE-------SRGAPPP 628
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
461-570 |
3.60e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 49.39 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEPPT-PAGRPPTPAGRPPTPANPTASSEPPTPAGRP-PTPAGRPPT-PANPTASSE---PPT 534
Cdd:PRK14971 363 TQKGDDASGGRGPKQHIKPVFTqPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSaTQPAGTPPTvSVDPPAAVPvnpPST 442
|
90 100 110
....*....|....*....|....*....|....*.
gi 30984464 535 PNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQ 570
Cdd:PRK14971 443 APQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKA 478
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
458-558 |
3.96e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 49.39 E-value: 3.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 458 AGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTpanptASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNP 537
Cdd:PRK14971 388 AAPQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPT-----VSVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSK 462
|
90 100
....*....|....*....|...
gi 30984464 538 EGAPAPSSNE--QPPAAASTDEA 558
Cdd:PRK14971 463 VSSLGPSTLRpiQEKAEQATGNI 485
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
395-554 |
4.59e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.46 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 395 GSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPT--PAGPTTASSEPPTPAG 472
Cdd:PRK07003 366 GAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPaaPAPPATADRGDDAADG 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 473 PTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAA 552
Cdd:PRK07003 446 DAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAA 525
|
..
gi 30984464 553 AS 554
Cdd:PRK07003 526 AP 527
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
393-578 |
5.79e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 49.01 E-value: 5.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 393 SRGSGGDEQTRPAA--GPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEP-----------PTPAG 459
Cdd:PHA03307 13 AAAEGGEFFPRPPAtpGDAADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGteapanesrstPTWSL 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 460 PTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEG 539
Cdd:PHA03307 93 STLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA 172
|
170 180 190
....*....|....*....|....*....|....*....
gi 30984464 540 APAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGS 578
Cdd:PHA03307 173 ALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSS 211
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
493-573 |
7.15e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 7.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 493 RPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPnPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPP 572
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAA-PAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115
|
.
gi 30984464 573 E 573
Cdd:PRK12270 116 E 116
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
487-565 |
7.46e-05 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.73 E-value: 7.46e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 487 PPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSneqPPAAASTDEATQKALDA 565
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAA---PPAAAAAAAPAAAAVED 115
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
451-574 |
7.73e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.32 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:PRK07994 365 LPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPA 444
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 30984464 531 EPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEP 574
Cdd:PRK07994 445 AASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVE 488
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
452-540 |
8.62e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 46.79 E-value: 8.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTaSSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PRK12495 88 SDAGSQASPDD-DAQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTAQPATPDERRSPRQRPPVSGE 166
|
....*....
gi 30984464 532 PPTPNPEGA 540
Cdd:PRK12495 167 PPTPSTPDA 175
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
404-578 |
1.04e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 404 PAAGPRPPTP-ASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPPT 482
Cdd:PRK07003 368 PGGGVPARVAgAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 483 PAgRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAgrPPTPANPTASSEPPT-PNPEGAPAPSSNEQPPAAASTDEATQK 561
Cdd:PRK07003 448 PV-PAKANARASADSRCDERDAQPPADSGSASAPA--SDAPPDAAFEPAPRAaAPSAATPAAVPDARAPAAASREDAPAA 524
|
170
....*....|....*..
gi 30984464 562 ALDALRDRQPPEPPCGS 578
Cdd:PRK07003 525 AAPPAPEARPPTPAAAA 541
|
|
| PHA03246 |
PHA03246 |
large tegument protein UL36; Provisional |
3189-3287 |
1.06e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223020 [Multi-domain] Cd Length: 3095 Bit Score: 48.43 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 3189 LGSLDPETDpetDPFAHPPDPRAPEAgDRASPSSYfgpppLSANAALSRRYVRSTGRSALAVLIEACWRIRRQLRMTRHA 3268
Cdd:PHA03246 3004 LSSTDSDSD---DSRSTVYNSNSTDT-DMSSTSRV-----IIADTLLTRRDFRKASRGALYALTKACEKIARQITQTRDQ 3074
|
90
....*....|....*....
gi 30984464 3269 LLNRSGAVLTGLYHVRMLL 3287
Cdd:PHA03246 3075 LRSRVITLAIEIFKIKMLL 3093
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
486-564 |
1.09e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 48.35 E-value: 1.09e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 486 RPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALD 564
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
465-546 |
1.41e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.65 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 465 SEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPAnPTASSEPPTPAgrPPTPAGRPPTPANPTASSEPPTPNPEGAPAPS 544
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSA-PKTKQAATTPS--PPPAKASPPIPVPAEPTEPSPTPPANAANAPP 437
|
..
gi 30984464 545 SN 546
Cdd:PRK14948 438 SL 439
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
455-627 |
1.43e-04 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 47.51 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTP-ANPTASSE--PPTPAGRPPTPAGRPP--TPANPTAS 529
Cdd:PRK14086 98 PPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPtARPAYPAYqqRPEPGAWPRAADDYGWqqQRLGFPPR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 530 SEPPTPNPEgAPAPSSNEQPPAAASTDEATQKAlDALRDRQPPEPPCGSLTELLGRHPDTDGgvsrlAAHEAGIAREVTE 609
Cdd:PRK14086 178 APYASPASY-APEQERDREPYDAGRPEYDQRRR-DYDHPRPDWDRPRRDRTDRPEPPPGAGH-----VHRGGPGPPERDD 250
|
170
....*....|....*...
gi 30984464 610 CSRLTInalRSPFPGSPG 627
Cdd:PRK14086 251 APVVPI---RPSAPGPLA 265
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
476-604 |
1.63e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 47.26 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 476 ASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPagrpPTPAGRPPTPANPTASSEPPTPNPegAPAPSSNEQPPAAAST 555
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSA----PKTKQAATTPSPPPAKASPPIPVP--AEPTEPSPTPPANAAN 434
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 30984464 556 DEAT-------QKALDALrdrqppEPPcgSLTELLGRHpdtdGGVSRLAAHEAGIA 604
Cdd:PRK14948 435 APPSlnleelwQQILAKL------ELP--STRMLLSQQ----AELVSLDSNRAVIA 478
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
458-558 |
1.74e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 46.87 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 458 AGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPP--TPANPTASSEPPTPAGRPPTPAGRPPTPAnPTASSEPPTP 535
Cdd:PTZ00436 227 AAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPakAAAPPAKAAAPPAKAAAPPAKAAAPPAKA-AAAPAKAAAA 305
|
90 100
....*....|....*....|...
gi 30984464 536 NPEGAPAPSSNEQPPAAASTDEA 558
Cdd:PTZ00436 306 PAKAAAAPAKAAAPPAKAAAPPA 328
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
453-574 |
1.83e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 47.23 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 453 EPPTPAGPTTASSEPPTPaGPTTASSEPPTP-----AGRPPTPAGRPPTPAnPTASSEPPTPAGR-----PPT-PAGRPP 521
Cdd:PLN03209 381 KPPTSPIPTPPSSSPASS-KSVDAVAKPAEPdvvpsPGSASNVPEVEPAQV-EAKKTRPLSPYARyedlkPPTsPSPTAP 458
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 30984464 522 TPANPTA---SSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEP 574
Cdd:PLN03209 459 TGVSPSVsstSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSP 514
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
474-563 |
1.88e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 46.56 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 474 TTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPAN--PTASSEPPTPNPEGAPAPSSNEQppA 551
Cdd:PRK10856 165 DTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANvdTAATPAPAAPATPDGAAPLPTDQ--A 242
|
90
....*....|..
gi 30984464 552 AASTDEATQKAL 563
Cdd:PRK10856 243 GVSTPAADPNAL 254
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
453-534 |
1.96e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 453 EPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAgrPPTPANPTASSEPPTPAGRPPT------PAGRppTPANP 526
Cdd:PRK12270 56 SAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAA--APAAPPAAAAAAAPAAAAVEDEvtplrgAAAA--VAKNM 131
|
....*...
gi 30984464 527 TASSEPPT 534
Cdd:PRK12270 132 DASLEVPT 139
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
455-567 |
1.97e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 47.25 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTpagRPPTPAGRPPTPANPTASsepPTPAGRPPTPagrPPTPANPTASSEPPT 534
Cdd:PRK14954 382 PSPAGSPDVKKKAPEPDLPQPDRHPGPA---KPEAPGARPAELPSPASA---PTPEQQPPVA---RSAPLPPSPQASAPR 452
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 30984464 535 PNPEGAP---------------------APSSNEQPPAAASTDEATQKALDALR 567
Cdd:PRK14954 453 NVASGKPgvdlgswqgkfmnftrngsrkQPVQASSSDAAQTGVFEGVAELEKLR 506
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
453-574 |
1.98e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 453 EPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE- 531
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADr 438
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 30984464 532 --PPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEP 574
Cdd:PRK07003 439 gdDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASD 483
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
451-579 |
2.03e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 46.84 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGP--TTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTpagrPPTPAGRPPTPANPTA 528
Cdd:PLN03209 451 TSPSPTAPTGvsPSVSSTSSVPAVPDTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPT----SPSPAAPVGKVAPSST 526
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 30984464 529 SSEPPTPNPEGAPAPSSNEQppaaasTDEATQKALDAL---RDRQPPEPPCGSL 579
Cdd:PLN03209 527 NEVVKVGNSAPPTALADEQH------HAQPKPRPLSPYtmyEDLKPPTSPTPSP 574
|
|
| Pro-rich |
pfam15240 |
Proline-rich; This family includes several eukaryotic proline-rich proteins. |
454-526 |
2.07e-04 |
|
Proline-rich; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 434562 [Multi-domain] Cd Length: 167 Bit Score: 44.59 E-value: 2.07e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30984464 454 PPTPAGPTTASSE----PPTPAGPTTASS-EPPTPAGRPPTPAGRPPTPANPtaSSEPPTPAGRPPTPAGRPPTPANP 526
Cdd:pfam15240 87 PPPQGGPQRPPPGkpqgPPPQGGPQQQGPpPPGKPQGPPPQGGGPPPQPGNP--QGPPPPPPGNPQGPPQRPPQPGNP 162
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
454-575 |
2.36e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 427171 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 2.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSE-----PPTPAGPTTASSEPPTPAGRPPTPAGRPPTpANPTASSEPPTPAGRPPTPAGRPPTPaNPTA 528
Cdd:pfam03154 294 PPQPFPLTPQSSQsqvppGPSPAAPGQSQQRIHTPPSQSQLQSQQPPR-EQPLPPAPLSMPHIKPPPTTPIPQLP-NPQS 371
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 30984464 529 SSEPPTPNPEGAPAPSSNEQPPAAAstdeatqKALDALRDRQPP--EPP 575
Cdd:pfam03154 372 HKHPPHLSGPSPFQMNSNLPPPPAL-------KPLSSLSTHHPPsaHPP 413
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
452-575 |
2.53e-04 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 46.84 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTAssEPPTPAGPTTASSEPPTPAGR--PPTPAGRPPTPANPTASSE---PPTpAGRPPTPAGRPPTPANP 526
Cdd:PLN03209 325 SQRVPPKESDAA--DGPKPVPTKPVTPEAPSPPIEeePPQPKAVVPRPLSPYTAYEdlkPPT-SPIPTPPSSSPASSKSV 401
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 30984464 527 TASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALD---ALRDRQPPEPP 575
Cdd:PLN03209 402 DAVAKPAEPDVVPSPGSASNVPEVEPAQVEAKKTRPLSpyaRYEDLKPPTSP 453
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
457-575 |
2.58e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.78 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 457 PAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAgrPPTPANPTASSEPPTPN 536
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQ--LLAARQQLQRAQGATKA 438
|
90 100 110
....*....|....*....|....*....|....*....
gi 30984464 537 PEGAPAPSSNEQPPAAASTDEAtqkALDALRDRQPPEPP 575
Cdd:PRK07994 439 KKSEPAAASRARPVNSALERLA---SVRPAPSALEKAPA 474
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
456-561 |
2.74e-04 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 46.50 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 456 TPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTpaNPTASSEPPTP-AGRPPTPAGRPPTPANPTASSEPPT 534
Cdd:PRK06995 52 APPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAK--RLTAQREQLVArAAAPAAPEAQAPAAPAERAAAENAA 129
|
90 100
....*....|....*....|....*....
gi 30984464 535 PNPEGAP--APSSNEQPPAAASTDEATQK 561
Cdd:PRK06995 130 RRLARAAaaAPRPRVPADAAAAVADAVKA 158
|
|
| PRK13042 |
PRK13042 |
superantigen-like protein SSL4; Reviewed; |
461-538 |
2.89e-04 |
|
superantigen-like protein SSL4; Reviewed;
Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 45.78 E-value: 2.89e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 461 TTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTP-AGRPPTPANPTASSEPPTPNPE 538
Cdd:PRK13042 24 TTQAANATTPSSTKVEAPQSTPPSTKVEAPQSKPNATTPPSTKVEAPQQTPNATTPsSTKVETPQSPTTKQVPTEINPK 102
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
463-550 |
3.03e-04 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 45.60 E-value: 3.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 463 ASSEPPTPAgpTTASSEPPTPAGRPPTPagrpPTPANPTASSEPPTPAGRPPTPAgrpptPANPTASSEPPTPNPEG--- 539
Cdd:PLN02983 140 ALPQPPPPA--PVVMMQPPPPHAMPPAS----PPAAQPAPSAPASSPPPTPASPP-----PAKAPKSSHPPLKSPMAgtf 208
|
90
....*....|...
gi 30984464 540 --APAPSsneQPP 550
Cdd:PLN02983 209 yrSPAPG---EPP 218
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
404-569 |
3.32e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.52 E-value: 3.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 404 PAAGPRPPTPASRPPTpgapptpgapptpgapptpgapptpagpttASSEPPTPAGPTTASSEPPTPAGPTTA-SSEPPT 482
Cdd:PRK07764 392 GAPAAAAPSAAAAAPA------------------------------AAPAPAAAAPAAAAAPAPAAAPQPAPApAPAPAP 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 483 PAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNeqPPAAASTDEATQKA 562
Cdd:PRK07764 442 PSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAG--ADDAATLRERWPEI 519
|
....*..
gi 30984464 563 LDALRDR 569
Cdd:PRK07764 520 LAAVPKR 526
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
502-583 |
3.34e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 502 ASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTE 581
Cdd:PRK12270 39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
|
..
gi 30984464 582 LL 583
Cdd:PRK12270 119 PL 120
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
461-571 |
3.34e-04 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 45.62 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPT-------PAGRPPTPANPTASSE-- 531
Cdd:PHA02682 69 NSACMQRPSGQSPLAPSPACAAPAPACPACAPAAPAPAVTCPAPAPACPPATAPTcpppavcPAPARPAPACPPSTRQcp 148
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 30984464 532 --PPTPNPEGAPAP---------SSNEQPPAAASTDEATQKALDALRDRQP 571
Cdd:PHA02682 149 paPPLPTPKPAPAAkpiflhnqlPPPDYPAASCPTIETAPAASPVLEPRIP 199
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
466-575 |
3.43e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 46.38 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 466 EPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGrpPTPANPTASSEPPTPNPEGAPAPSS 545
Cdd:PRK07003 359 EPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALA--PKAAAAAAATRAEAPPAAPAPPATA 436
|
90 100 110
....*....|....*....|....*....|....*
gi 30984464 546 NE-----QPPAAASTDEATQKALDALRDRQPPEPP 575
Cdd:PRK07003 437 DRgddaaDGDAPVPAKANARASADSRCDERDAQPP 471
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
451-575 |
3.44e-04 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 45.93 E-value: 3.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEP-PTPAGRPPTPagrPPTPANPTASSEPPTPAGRPPTPagrpPTPANPTAS 529
Cdd:pfam13254 221 PSVSGISADSSPTKEEPSEEADTLSTDKEQsPAPTSASEPP---PKTKELPKDSEEPAAPSKSAEAS----TEKKEPDTE 293
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 30984464 530 SEPPTPNPEGAPAPSSneqPPAAASTDE-ATQKALDALRDRQPPEPP 575
Cdd:pfam13254 294 SSPETSSEKSAPSLLS---PVSKASIDKpLSSPDRDPLSPKPKPQSP 337
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
455-546 |
3.56e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 45.79 E-value: 3.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEpPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 534
Cdd:PRK10856 161 SVPLDTSTTTDPATTPAPAAPVDTT-PTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPT 239
|
90
....*....|...
gi 30984464 535 PN-PEGAPAPSSN 546
Cdd:PRK10856 240 DQaGVSTPAADPN 252
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
358-584 |
3.81e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 46.32 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 358 PPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFsrGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPtpgappt 437
Cdd:PHA03307 31 AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRF--EPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPA------- 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 438 pgaPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPA 517
Cdd:PHA03307 102 ---REGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 30984464 518 GRPPTPANPTASSEPPT-PNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGSLTELLG 584
Cdd:PHA03307 179 PEETARAPSSPPAEPPPsTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSG 246
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
475-557 |
4.93e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.72 E-value: 4.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 475 TASSEPPTPAGRPPTPAGRPPTPAnPTASSEPPTPAGRPPTPAGRPPtPANPTASSEPPTPNPEGAPAPSSNEQPPAAAS 554
Cdd:PRK14948 512 SQSGSASNTAKTPPPPQKSPPPPA-PTPPLPQPTATAPPPTPPPPPP-TATQASSNAPAQIPADSSPPPPIPEEPTPSPT 589
|
...
gi 30984464 555 TDE 557
Cdd:PRK14948 590 KDS 592
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
471-554 |
4.96e-04 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 45.02 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 471 AGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAG-RPPTPANPTASSEPPTPNPegAPAPSSNEQP 549
Cdd:PRK10856 169 TTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANvDTAATPAPAAPATPDGAAP--LPTDQAGVST 246
|
....*
gi 30984464 550 PAAAS 554
Cdd:PRK10856 247 PAADP 251
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
338-526 |
5.50e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 45.64 E-value: 5.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 338 PRPNQHYPLGFSKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASRP 417
Cdd:PRK12323 385 PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARP 464
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 418 PTPGAPPTPGapptPGAPPTPGAPPTPAGPTTASSEPP---TPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRP 494
Cdd:PRK12323 465 AAAGPRPVAA----AAAAAPARAAPAAAPAPADDDPPPweeLPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFET 540
|
170 180 190
....*....|....*....|....*....|..
gi 30984464 495 PTPAnPTASSEPPTPAGRPPTPAGRPPTPANP 526
Cdd:PRK12323 541 LAPA-PAAAPAPRAAAATEPVVAPRPPRASAS 571
|
|
| DedD |
COG3147 |
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
455-548 |
5.59e-04 |
|
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225689 [Multi-domain] Cd Length: 226 Bit Score: 44.11 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPP---TPANPTASSEPPTPAGRPPTpagrPPTPANPTASSE 531
Cdd:COG3147 58 PAVVQVVALPTQPPEGVAQEIQDAGDAAAASVDPQPVAQPPvesTPAGVPVAAQTPKPVKPPKQ----PPAGAVPAKPTP 133
|
90
....*....|....*..
gi 30984464 532 PPTPNPEGAPAPSSNEQ 548
Cdd:COG3147 134 KPEPKPVAEPAAAPTGQ 150
|
|
| Pro-rich |
pfam15240 |
Proline-rich; This family includes several eukaryotic proline-rich proteins. |
468-578 |
6.00e-04 |
|
Proline-rich; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 434562 [Multi-domain] Cd Length: 167 Bit Score: 43.05 E-value: 6.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 468 PTPAGPTTASSEPPTPAGRPPT--PAGRPPTPANPTASSEPP-TPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPaPS 544
Cdd:pfam15240 49 PPPGGFPPRPPASGRPPGPPPQggPQQPPPQGGKQPQGPPPQgGPQRPPPGKPQGPPPQGGPQQQGPPPPGKPQGPP-PQ 127
|
90 100 110
....*....|....*....|....*....|....
gi 30984464 545 SNEQPPAAASTdeatqkaldalrdRQPPEPPCGS 578
Cdd:pfam15240 128 GGGPPPQPGNP-------------QGPPPPPPGN 148
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
451-532 |
6.41e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 45.34 E-value: 6.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:PRK14948 513 QSGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDS 592
|
..
gi 30984464 531 EP 532
Cdd:PRK14948 593 SP 594
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
461-562 |
6.87e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 44.54 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAgPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPagrPPTPANPTASSEPPTPN-PEG 539
Cdd:PRK10905 121 STLPTEPATVA-PVRNGNASRQTAKTQTAERPATTRPARKQAVIEPKKPQATAKTE---PKPVAQTPKRTEPAAPVaSTK 196
|
90 100
....*....|....*....|...
gi 30984464 540 APAPSSNEQPPAAASTDEATQKA 562
Cdd:PRK10905 197 APAATSTPAPKETATTAPVQTAS 219
|
|
| MISS |
pfam15822 |
MAPK-interacting and spindle-stabilizing protein-like; MISS is a family of eukaryotic ... |
376-554 |
7.11e-04 |
|
MAPK-interacting and spindle-stabilizing protein-like; MISS is a family of eukaryotic MAPK-interacting and spindle-stabilizing protein-like proteins. MISS is rich in prolines and has four potential MAPK-phosphorylation sites, a MAPK-docking site, a PEST sequence (PEST motif) and a bipartite nuclear localization signal. The endogenous protein accumulates during mouse meiotic maturation and is found as discrete dots on the MII spindle. MISS is the first example of a physiological MAPK-substrate that is stabilized in MII that specifically regulates MII spindle integrity during the CSF arrest.
Pssm-ID: 318115 [Multi-domain] Cd Length: 238 Bit Score: 44.21 E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 376 SLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPP 455
Cdd:pfam15822 44 AVPSGLPPSTAPSTVPFGPAPTGMYPSIPLTGPSPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPIGPYPTPNMPFPELP 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 456 TPAGPTT--ASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGR-PPTPANPTASSEP 532
Cdd:pfam15822 124 RPYGAPTdpAAAAPSGPWGSMSSGPWAPGMGGQYPAPNMPYPSPGPYPAVPPPQSPGAAPPVPWGTvPPGPWGPPAPYPD 203
|
170 180
....*....|....*....|....*
gi 30984464 533 PT---PNPEGAPAPSSNEQPPAAAS 554
Cdd:pfam15822 204 PTgsyPMPGLYPTPNNPFQVPSGPS 228
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
456-565 |
7.18e-04 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 44.94 E-value: 7.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 456 TPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPAN--PTASSEPPTPAGRPPTPAGRPPTPANPTASSEPP 533
Cdd:PTZ00436 232 AAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAapPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAA 311
|
90 100 110
....*....|....*....|....*....|..
gi 30984464 534 TPNPEGAPaPSSNEQPPAAASTDEATQKALDA 565
Cdd:PTZ00436 312 APAKAAAP-PAKAAAPPAKAATPPAKAAAPPA 342
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
465-554 |
9.07e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.91 E-value: 9.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 465 SEPPTPAGPTTASSEPPTPAGRP-----PTPAGRPPT--PANPTASSEPPTPAG-----RPPTPAGRP---------PTP 523
Cdd:pfam05109 427 STTTSPTLNTTGFAAPNTTTGLPssthvPTNLTAPAStgPTVSTADVTSPTPAGttsgaSPVTPSPSPrdngteskaPDM 506
|
90 100 110
....*....|....*....|....*....|.
gi 30984464 524 ANPTASSEPPTPNPEgAPAPSSNEQPPAAAS 554
Cdd:pfam05109 507 TSPTSAVTTPTPNAT-SPTPAVTTPTPNATS 536
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
456-538 |
1.08e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 44.57 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 456 TPAGPTTASSEPPTPAGPTTASSEPPTPagrPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTP 535
Cdd:PRK14948 514 SGSASNTAKTPPPPQKSPPPPAPTPPLP---QPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590
|
...
gi 30984464 536 NPE 538
Cdd:PRK14948 591 DSS 593
|
|
| DUF4045 |
pfam13254 |
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ... |
452-572 |
1.20e-03 |
|
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.
Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 44.39 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAgPTTASSEPPTPAGPTTASSEPPTPAGRPPTPagrpPTPANPTASSEPPTPAGRpptpagRPPTPANPTASSE 531
Cdd:pfam13254 247 DKEQSPA-PTSASEPPPKTKELPKDSEEPAAPSKSAEAS----TEKKEPDTESSPETSSEK------SAPSLLSPVSKAS 315
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 30984464 532 PPTPNPEGAPAPSSNEQPPAAASTDEATQkaldaLRDRQPP 572
Cdd:pfam13254 316 IDKPLSSPDRDPLSPKPKPQSPPKDFRAN-----LRSREVP 351
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
455-535 |
1.21e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 44.29 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRpptpANPTASSEPPT 534
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVAR----ADPRETRVPMS 195
|
.
gi 30984464 535 P 535
Cdd:PTZ00144 196 R 196
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
454-581 |
1.26e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTP----ANPTASSEPPTPAGRPPTPAGRPPTPANPTAS 529
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPpaapAPPATADRGDDAADGDAPVPAKANARASADSR 462
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 30984464 530 SEPPTPNPEGAPAPSS---NEQPPAAASTDE--ATQKALDALRDRQPPEPPCGSLTE 581
Cdd:PRK07003 463 CDERDAQPPADSGSASapaSDAPPDAAFEPAprAAAPSAATPAAVPDARAPAAASRE 519
|
|
| PARM |
pfam17061 |
PARM; Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present ... |
460-562 |
1.28e-03 |
|
PARM; Human PARM-1 is a mucin-like, androgen-regulated transmembrane protein that is present in most tissues, with high levels in the heart, kidney and placenta. It has been shown to be induced and expressed in prostate after castration and may have a role in cell proliferation and immortalisation in prostate cancer.
Pssm-ID: 435714 [Multi-domain] Cd Length: 296 Bit Score: 43.69 E-value: 1.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 460 PTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEP------PTPAGRPP-TP-AGRPPTPANPtaSSE 531
Cdd:pfam17061 53 PVTASAPTSPLPKNISAEPREEEPTSPASNWEGTSTDPSPPGLSPTSggvhltPTPEEHSSgTPeASVPATGSQS--PAE 130
|
90 100 110
....*....|....*....|....*....|....*...
gi 30984464 532 PPT----PNPEGAPAPSSN---EQPPAAASTDEATQKA 562
Cdd:pfam17061 131 SPTltspQAPASSPSSLSTsppEVSSASVSTNHSSAET 168
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
458-565 |
1.38e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 43.79 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 458 AGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPAN--PTASSEPPTPAGRPPTPAGRPPTPAnptasSEPPTp 535
Cdd:PTZ00436 220 AAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAapPAKAAAPPAKAAAPPAKAAAPPAKA-----AAPPA- 293
|
90 100 110
....*....|....*....|....*....|
gi 30984464 536 npEGAPAPSSNEQPPAAASTDEATQKALDA 565
Cdd:PTZ00436 294 --KAAAAPAKAAAAPAKAAAAPAKAAAPPA 321
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
390-595 |
1.42e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 411408 [Multi-domain] Cd Length: 557 Bit Score: 44.37 E-value: 1.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 390 TPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAgpTTASSEPPT 469
Cdd:NF033839 283 TPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPK--PEVKPQPEK 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 470 PAGPTTASSEPPTPAGRP----PTPAGRP-PTPANPTASSEP--PTPAGRP----PTPAGRP-PTPANPTASSEPPTPNP 537
Cdd:NF033839 361 PKPEVKPQPEKPKPEVKPqpetPKPEVKPqPEKPKPEVKPQPekPKPEVKPqpekPKPEVKPqPEKPKPEVKPQPEKPKP 440
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30984464 538 EGAPAPSSN--EQPPAAASTDEATQKALDALRDRQPPEP----PCGSLTELLGRHPDTDGGVSR 595
Cdd:NF033839 441 EVKPQPEKPkpEVKPQPETPKPEVKPQPEKPKPEVKPQPekpkPDNSKPQADDKKPSTPNNLSK 504
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
451-594 |
1.48e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 436069 [Multi-domain] Cd Length: 480 Bit Score: 44.14 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAG---------PTTASSEPP---TPAGRPPTPAGRPPTPANPTASSEPP--TPAGRPPTP 516
Cdd:pfam17823 138 SSAPMAAAPRTNAASNAPTAAAsstaaasgaPTTAASSAPatlTPASGISTAATATGHPAAGTALAAVGnsSPAAGTVTA 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 517 AGRPPTPAN-----------PTASSEPPTPNPEG---APA---PSSNEQPPAAASTDEATQKALDALRDRQP-----PEP 574
Cdd:pfam17823 218 AVGTVTPAAlatlaaaagtvASAAGTINTGDPHArrlSPAkhmPSDTSARNPAAPSGAQAQGLIIQVSTDQPvhntaGEP 297
|
170 180
....*....|....*....|.
gi 30984464 575 -PCGSLTELLGRHPDTDGGVS 594
Cdd:pfam17823 298 tPSPSNTTLEPNTPKSVASTN 318
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
454-567 |
1.56e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 42.68 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTassePPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPagrPPTPagrPPTPANPTASSEPP 533
Cdd:PRK11633 58 AATQALPTQ----PPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKP---KPVE---KPKPKPKPQQKVEA 127
|
90 100 110
....*....|....*....|....*....|....
gi 30984464 534 TPNPEGAPAPSSNEQPpaaASTDEATQKALDALR 567
Cdd:PRK11633 128 PPAPKPEPKPVVEEKA---APTGKAYVVQLGALK 158
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
455-568 |
1.59e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 43.31 E-value: 1.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPA-GPTTASSEPPTPAGPTTASSEPPTpagrPPTPAGRPPTPANPTASsepPTPAGRPPTPAGRPPTPANPTASsepp 533
Cdd:PHA02682 112 PAPAcPPATAPTCPPPAVCPAPARPAPAC----PPSTRQCPPAPPLPTPK---PAPAAKPIFLHNQLPPPDYPAAS---- 180
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 30984464 534 TPNPEGAPAPSSNEQP-------PAAASTDEATQKAL----DALRD 568
Cdd:PHA02682 181 CPTIETAPAASPVLEPripdkiiDADNDDKDLIKKELadiaDSVRD 226
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
457-544 |
1.62e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 457 PAGPTTASSEPPTPAGPTTASSEPPTPAGrpptPAGRPPTPANPTASSEPPTPAGRPPTPAGR-PPTPANPTAS------ 529
Cdd:PHA03255 89 TPVPTTSNASTINVTTKVTAQNITATEAG----TGTSTGVTSNVTTRSSSTTSATTRITNATTlAPTLSSKGTSnatktt 164
|
90
....*....|....*
gi 30984464 530 SEPPTPNPEGAPAPS 544
Cdd:PHA03255 165 AELPTVPDERQPSLS 179
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
454-539 |
1.69e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 42.93 E-value: 1.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPtPAGRPPTPANPTASSEPP 533
Cdd:PRK12495 96 PDDDAQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTAQPATPDERRS-PRQRPPVSGEPPTPSTPD 174
|
....*.
gi 30984464 534 TPNPEG 539
Cdd:PRK12495 175 AHVAGT 180
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
451-508 |
1.70e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 43.90 E-value: 1.70e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAgpttASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 508
Cdd:PTZ00144 136 KAEKTTPEKPKAAAPTPEPPA----ASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189
|
|
| PHA00666 |
PHA00666 |
putative protease |
461-564 |
1.75e-03 |
|
putative protease
Pssm-ID: 222808 [Multi-domain] Cd Length: 233 Bit Score: 42.72 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPanptaSSEPPTPAGRPPTPAGRPPTPaNPTASSEPPTPNPEGA 540
Cdd:PHA00666 10 RRLCNEQPGDGGSQPAASEPAAGAGDNPAPQGDPTQE-----EGDKPQPAAGADKPEGDKKAD-GDKPEEKKPGEKPEGA 83
|
90 100
....*....|....*....|....
gi 30984464 541 PApSSNEQPPAAASTDEATQKALD 564
Cdd:PHA00666 84 PE-KYEFQAAEGVELDTGALGAFE 106
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
451-533 |
1.79e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 43.48 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPA-GPTTASSEPPTPAGRPPTPAGRPPTPAN-PTASSEPPTPAGRPPTPAGRPPTPANPTA 528
Cdd:PRK10856 167 STTTDPATTPAPAAPVDTTPTnSQTPAVATAPAPAVDPQQNAVVAPSQANvDTAATPAPAAPATPDGAAPLPTDQAGVST 246
|
....*
gi 30984464 529 SSEPP 533
Cdd:PRK10856 247 PAADP 251
|
|
| PAT1 |
pfam09770 |
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate ... |
451-550 |
1.89e-03 |
|
Topoisomerase II-associated protein PAT1; Members of this family are necessary for accurate chromosome transmission during cell division.
Pssm-ID: 401645 [Multi-domain] Cd Length: 846 Bit Score: 43.87 E-value: 1.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:pfam09770 207 AKKPAQQPAPAPAQPPAAPPAQQAQQQQQFPPQIQQQQQPQQQPQQPQQHPGQGHPVTILQRPQSPQPDPAQPSIQPQAQ 286
|
90 100
....*....|....*....|
gi 30984464 531 EPPTPNPEGAPAPSSNEQPP 550
Cdd:pfam09770 287 QFHQQPPPVPVQPTQILQNP 306
|
|
| Drf_FH1 |
pfam06346 |
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs) ... |
454-541 |
1.95e-03 |
|
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs). It consists of low complexity repeats of around 12 residues.
Pssm-ID: 428897 [Multi-domain] Cd Length: 154 Bit Score: 41.33 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 454 PPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTP--AGRPPTPANPTASSEPPTPAgrPPTPAGRPPTPANPTASSE 531
Cdd:pfam06346 1 PPPPPLPGDSSLPPGACIPPPPPLPGGGGIPPPPPLPgsAAIPPPPPLPGGTSIPPPPP--LPGGASIPPPPPLPGSTGI 78
|
90
....*....|
gi 30984464 532 PPTPNPEGAP 541
Cdd:pfam06346 79 PPPPPLPGGA 88
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
452-554 |
2.18e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 43.08 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTASSEPPTPAGPTTASSEPPTPaGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PHA03381 69 ADYPYYTGSSSEDERPADPRPSRRPHAQPEAS-GPGPARGARGPAGSRGRGRRAESPSPRDPPNPKGASAPRGRKSACAD 147
|
90 100
....*....|....*....|...
gi 30984464 532 PPTPNPEGAPAPSSNEQPPAAAS 554
Cdd:PHA03381 148 SAALLDAPAPAAPKRQKTPAGLA 170
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
451-577 |
2.44e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 43.54 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPT------TASSEPPTPAGRPPTPAGR------PPTPANPtasSEPPTPAGRPPTPA- 517
Cdd:PRK08691 379 SPSAQTAEKETAAKKPQPRPEAETaqtpvqTASAAAMPSEGKTAGPVSNqenndvPPWEDAP---DEAQTAAGTAQTSAk 455
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 30984464 518 -----GRPPTPANPTASSEPPTPNPEGAP-APSSNEQPPAAASTDEATQKALDALRDRQPPEPPCG 577
Cdd:PRK08691 456 siqtaSEAETPPENQVSKNKAADNETDAPlSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYG 521
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
474-546 |
2.63e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 2.63e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30984464 474 TTASSEPPTPAGRPPTPAgrPPTPANPTASSEPPTPAGRPPtpaGRPPTPANPTASSEPPTPN-PEGAPAPSSN 546
Cdd:TIGR00601 81 TGKVAPPAATPTSAPTPT--PSPPASPASGMSAAPASAVEE---KSPSEESATATAPESPSTSvPSSGSDAAST 149
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
351-558 |
2.64e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.62 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 351 RRRPTWTPPSSLEDLSAGRHHPKRASLPTRTRRSARHAATPFSRGSGGDEQTRPAAGPRPPTPASRPPTPGAPPTPGAPP 430
Cdd:PHA03307 64 RFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 431 TPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPP--TPAGRPPTPAGRPPTPANPTASSEPPT 508
Cdd:PHA03307 144 PGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPpsTPPAAASPRPPRRSSPISASASSPAPA 223
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30984464 509 PA-------------------------GRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEA 558
Cdd:PHA03307 224 PGrsaaddagasssdssssessgcgwgPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSP 298
|
|
| PRK12438 |
PRK12438 |
hypothetical protein; Provisional |
497-570 |
2.70e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 171499 [Multi-domain] Cd Length: 991 Bit Score: 43.70 E-value: 2.70e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30984464 497 PANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNpegAPAPSSNEQPPAAAStdeATQKALDALRDRQ 570
Cdd:PRK12438 897 PGTGRVATAPGGDAASAPPPGAGPPAPPQAVPPPRTTQPP---AAPPRGPDVPPAAVA---ELRETLADLRSAQ 964
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
460-627 |
2.72e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 43.54 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 460 PTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRP-PTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEppTPNPE 538
Cdd:PRK08691 360 PLAAASCDANAVIENTELQSPSAQTAEKETAAKKPqPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENND--VPPWE 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 539 GAPAPSSNEQPPAAASTdEATQKAldalrdRQPPEPPCGSLTELLGRHPDTDGGVSRLAAHEAGIAREVTECSRLTINAL 618
Cdd:PRK08691 438 DAPDEAQTAAGTAQTSA-KSIQTA------SEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVETETFAH 510
|
....*....
gi 30984464 619 RSPFPGSPG 627
Cdd:PRK08691 511 EAPAEPFYG 519
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
455-549 |
2.87e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 43.13 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE-PP 533
Cdd:PRK14959 398 PTPGTQGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSGIPPRPAPRMPEASPVPGAPDSVASASDaPP 477
|
90
....*....|....*.
gi 30984464 534 TPNPEGAPAPSSNEQP 549
Cdd:PRK14959 478 TLGDPSDTAEHTPSGP 493
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
455-574 |
2.92e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.50 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGR------------------------------------------------ 486
Cdd:PHA03377 468 LTPVEHTTVILHQPPQSPPTVAIKPAPPPSRRrrgacvvydddiievidvetteeeesvtqpakphrkvqdgfqrsgrrq 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 487 ----PPT--PAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNE-QPPAAASTDEAT 559
Cdd:PHA03377 548 kratPPKvsPSDRGPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPHEkQPPSSAPRDMAP 627
|
170
....*....|....*
gi 30984464 560 QKALDALRDRQPPEP 574
Cdd:PHA03377 628 SVVRMFLRERLLEQS 642
|
|
| PHA03264 |
PHA03264 |
envelope glycoprotein D; Provisional |
480-554 |
2.94e-03 |
|
envelope glycoprotein D; Provisional
Pssm-ID: 223029 [Multi-domain] Cd Length: 416 Bit Score: 43.07 E-value: 2.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 480 PPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE-----------PPTPNPEGAPA-PSSNE 547
Cdd:PHA03264 267 PPAPSGGSPAPPGDDRPEAKPEPGPVEDGAPGRETGGEGEGPEPAGRDGAAGgepkpgpprpaPDADRPEGWPSlEAITF 346
|
....*..
gi 30984464 548 QPPAAAS 554
Cdd:PHA03264 347 PPPTPAT 353
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
451-509 |
3.18e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.96 E-value: 3.18e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 30984464 451 SSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRP---PTPANPTASSEPPTP 509
Cdd:TIGR00601 83 KVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESataTAPESPSTSVPSSGS 144
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
453-521 |
3.62e-03 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.13 E-value: 3.62e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30984464 453 EPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTA--SSEPP--TP-AG---RPPTPaGRPP 521
Cdd:PLN02983 143 QPPPPAPVVMMQPPPPHAMPPASPPAAQPAPSAPASSPPPTPASPPPAKApkSSHPPlkSPmAGtfyRSPAP-GEPP 218
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
493-575 |
3.79e-03 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 42.16 E-value: 3.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 493 RPPTPANPTAssepPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPP 572
Cdd:PHA02682 74 QRPSGQSPLA----PSPACAAPAPACPACAPAAPAPAVTCPAPAPACPPATAPTCPPPAVCPAPARPAPACPPSTRQCPP 149
|
...
gi 30984464 573 EPP 575
Cdd:PHA02682 150 APP 152
|
|
| rad23 |
TIGR00601 |
UV excision repair protein Rad23; All proteins in this family for which functions are known ... |
461-530 |
3.84e-03 |
|
UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 3.84e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 461 TTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:TIGR00601 80 GTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGSDAAST 149
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
460-569 |
3.88e-03 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 42.48 E-value: 3.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 460 PTTASSEPPTPAGPTTA---SSEPPTPAGRPPTPAGRPPTPANPTASSEPPT-PAGRPPTPAGRPPTpANPTASSEPPTP 535
Cdd:PRK12373 205 RYNASKALAEDIGDTVKridGTEVPLLAPWQGDAAPVPPSEAARPKSADAETnAALKTPATAPKAAA-KNAKAPEAQPVS 283
|
90 100 110
....*....|....*....|....*....|....*
gi 30984464 536 NPEGA-PAPSSNEQPPAAASTDEATQKALDALRDR 569
Cdd:PRK12373 284 GTAAAePAPKEAAKAAAAAAKPALEDKPRPLGIAR 318
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
457-537 |
4.12e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 42.64 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 457 PAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPagrpPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPN 536
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSA----PKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAP 436
|
.
gi 30984464 537 P 537
Cdd:PRK14948 437 P 437
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
400-603 |
4.46e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 411408 [Multi-domain] Cd Length: 557 Bit Score: 42.45 E-value: 4.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 400 EQTRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPagptTASSE 479
Cdd:NF033839 359 EKPKPEVKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKP----EVKPQ 434
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 480 PPTPAgrpPTPAGRPPTPaNPTASSEPPTPAgrpPTPAGRPPTPaNPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEAT 559
Cdd:NF033839 435 PEKPK---PEVKPQPEKP-KPEVKPQPETPK---PEVKPQPEKP-KPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDK 506
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 30984464 560 QKALDALRDRQPPEPPCGSLtellgrhPDTdGGVSRLAAHEAGI 603
Cdd:NF033839 507 QPSNQASTNEKATNKPKKSL-------PST-GSISNLALEIAGL 542
|
|
| PLN03209 |
PLN03209 |
translocon at the inner envelope of chloroplast subunit 62; Provisional |
409-560 |
4.81e-03 |
|
translocon at the inner envelope of chloroplast subunit 62; Provisional
Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 42.61 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 409 RPPTPASrpptpGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSE--PPTPAGPTTASSEPPTPagr 486
Cdd:PLN03209 327 RVPPKES-----DAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDlkPPTSPIPTPPSSSPASS--- 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 487 PPTPAGRPPTPANPTASSEP------------PTPAGRPPTPAGR-----PPTPANPTASSEPPTPNPEGAPAPSSNEQP 549
Cdd:PLN03209 399 KSVDAVAKPAEPDVVPSPGSasnvpevepaqvEAKKTRPLSPYARyedlkPPTSPSPTAPTGVSPSVSSTSSVPAVPDTA 478
|
170
....*....|.
gi 30984464 550 PAAASTDEATQ 560
Cdd:PLN03209 479 PATAATDAAAP 489
|
|
| TALPID3 |
pfam15324 |
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for ... |
455-557 |
5.08e-03 |
|
Hedgehog signalling target; TALPID3 is a family of eukaryotic proteins that are targets for Hedgehog signalling. Mutations in this gene noticed first in chickens lead to multiple abnormalities of development.
Pssm-ID: 434634 [Multi-domain] Cd Length: 1288 Bit Score: 42.57 E-value: 5.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAgPTTASSEPPTPAGPTTASSEPPTPAGRP-PTPAGRPPTPANPTASSEPPTPAGRP-PTPAGRPPTPANPTASSEP 532
Cdd:pfam15324 985 PTPV-PTPQPTPPCSPPSPLKEPSPVKTPDSSPcVSEHDFFPVKEIPPEKGADTGPAVSLvITPTVTPIATPPPAATPTP 1063
|
90 100
....*....|....*....|....*
gi 30984464 533 PTPNPEGAPAPSSNEQPPAAASTDE 557
Cdd:pfam15324 1064 PLSENSIDKLKSPSPELPKPWEDSD 1088
|
|
| Drf_FH1 |
pfam06346 |
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs) ... |
450-543 |
5.26e-03 |
|
Formin Homology Region 1; This region is found in some of the Diaphanous related formins (Drfs). It consists of low complexity repeats of around 12 residues.
Pssm-ID: 428897 [Multi-domain] Cd Length: 154 Bit Score: 40.18 E-value: 5.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 450 ASSEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPptpaGRPPTPANPTAS 529
Cdd:pfam06346 51 GTSIPPPPPLPGGASIPPPPPLPGSTGIPPPPPLPGGAGIPPPPPPLPGGAGIPPPPPPLPGGP----GIPPPPPFPGGP 126
|
90
....*....|....
gi 30984464 530 SEPPTPNPEGAPAP 543
Cdd:pfam06346 127 GIPPPPPGMGMPPP 140
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
452-530 |
5.40e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 42.26 E-value: 5.40e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 452 SEPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASS 530
Cdd:PRK14948 361 PSAFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSL 439
|
|
| PRK10672 |
PRK10672 |
endolytic peptidoglycan transglycosylase RlpA; |
456-559 |
5.45e-03 |
|
endolytic peptidoglycan transglycosylase RlpA;
Pssm-ID: 236733 [Multi-domain] Cd Length: 361 Bit Score: 41.97 E-value: 5.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 456 TPAGPTTASSEPPTPAGPTTASSEPPTPagrPPTPAGRPPTpaNPTASSEPPTPAGRPPTPAGRPPTPANP--TASSEPP 533
Cdd:PRK10672 186 TVAKQSYALPARPDLSGGMGTPSVQPAP---APQGDVLPVS--NSTLKSEDPTGAPVTSSGFLGAPTTLAPgvLEGSEPT 260
|
90 100
....*....|....*....|....*.
gi 30984464 534 TPNPEGAPAPSSNEQPPAAASTDEAT 559
Cdd:PRK10672 261 PTAPSSAPATAPAAAAPQAAATSSSA 286
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
491-568 |
5.52e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 42.42 E-value: 5.52e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 30984464 491 AGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTA-SSEPPTPNPEGAPAPSsneqPPAAASTDEATQKALDALRD 568
Cdd:PRK14965 378 ERGAPAPPSAAWGAPTPAAPAAPPPAAAPPVPPAAPARpAAARPAPAPAPPAAAA----PPARSADPAAAASAGDRWRA 452
|
|
| PHA03418 |
PHA03418 |
hypothetical E4 protein; Provisional |
495-582 |
5.72e-03 |
|
hypothetical E4 protein; Provisional
Pssm-ID: 177646 [Multi-domain] Cd Length: 230 Bit Score: 41.26 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 495 PTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEP 574
Cdd:PHA03418 37 PAPHHPNPQEDPDKNPSPPPDPPLTPRPPAQPNGHNKPPVTKQPGGEGTEEDHQAPLAADADDDPRPGKRSKADEHGPAP 116
|
....*...
gi 30984464 575 PCGSLTEL 582
Cdd:PHA03418 117 GRAALAPF 124
|
|
| PTZ00144 |
PTZ00144 |
dihydrolipoamide succinyltransferase; Provisional |
488-570 |
5.82e-03 |
|
dihydrolipoamide succinyltransferase; Provisional
Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.98 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 488 PTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPNPEGAPAPSSneqPPAAASTDEATQKALDALR 567
Cdd:PTZ00144 120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKP---PPTPVARADPRETRVPMSR 196
|
...
gi 30984464 568 DRQ 570
Cdd:PTZ00144 197 MRQ 199
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
455-519 |
5.95e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 42.04 E-value: 5.95e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAgRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGR 519
Cdd:PRK14965 382 PAPPSAAWGAPTPAAPAAPPPAAAPPVPPA-APARPAAARPAPAPAPPAAAAPPARSADPAAAAS 445
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
488-561 |
6.30e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 42.26 E-value: 6.30e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30984464 488 PTPAGRPPTPANPTASSEPPTPAGRPPTPAgRPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQK 561
Cdd:PRK14948 518 SNTAKTPPPPQKSPPPPAPTPPLPQPTATA-PPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTK 590
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
485-574 |
6.80e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 6.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 485 GRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAgrpptPANPTASSEPPTPNPEGAPAPSsnEQPPAAASTDEATQKALD 564
Cdd:PRK07764 384 RLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAA-----PAAAAAPAPAAAPQPAPAPAPA--PAPPSPAGNAPAGGAPSP 456
|
90
....*....|
gi 30984464 565 ALRDRQPPEP 574
Cdd:PRK07764 457 PPAAAPSAQP 466
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
477-571 |
7.18e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 42.04 E-value: 7.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 477 SSEPPTPAGRPPTPagRPPTPANPTASSEPPTPAGRPptPAGRPPTPAnptassePPTPNPEGAPAPSSNEQppAAASTD 556
Cdd:PRK14965 381 APAPPSAAWGAPTP--AAPAAPPPAAAPPVPPAAPAR--PAAARPAPA-------PAPPAAAAPPARSADPA--AAASAG 447
|
90
....*....|....*
gi 30984464 557 EATQKALDALRDRQP 571
Cdd:PRK14965 448 DRWRAFVAFVKGKKP 462
|
|
| PHA03369 |
PHA03369 |
capsid maturational protease; Provisional |
452-550 |
7.47e-03 |
|
capsid maturational protease; Provisional
Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 41.91 E-value: 7.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAGPTTASSEPPTPAGPTtassePPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSE 531
Cdd:PHA03369 357 SRVLAAAAKVAVIAAPQTHTGPA-----DRQRPQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNPQSPGTSYGPE 431
|
90
....*....|....*....
gi 30984464 532 PPTPNPegaPAPSSNEQPP 550
Cdd:PHA03369 432 PVGPVP---PQPTNPYVMP 447
|
|
| PRK08691 |
PRK08691 |
DNA polymerase III subunits gamma and tau; Validated |
455-605 |
8.25e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 42.00 E-value: 8.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 455 PTPAGPTTASSEPPTPAGPTTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPTPANPTASSEPPT 534
Cdd:PRK08691 451 QTSAKSIQTASEAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVETETFAHEAPAEPFYGYGFPDNDCPPE 530
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 30984464 535 PNPEGAPAPSSNEQPPAAA---STDEATQKALDalRDRQPPEPPCGSLTE---LLGRHPDTDGGVSRLAAHEAGIAR 605
Cdd:PRK08691 531 DGAEIPPPDWEHAAPADTAgggADEEAEAGGIG--GNNTPSAPPPEFSTEnwaAIVRHFARKLGAAQMPAQHSAWTE 605
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
402-574 |
8.80e-03 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 411408 [Multi-domain] Cd Length: 557 Bit Score: 41.68 E-value: 8.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 402 TRPAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPP 481
Cdd:NF033839 273 TKFKKGLTQDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKP 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 482 TPAGRPPTPA-GRPPTPANPTASSEP----PTPAGRP----PTPAGRP-PTPANPTASSEPPTPNPEGAPAPSS--NEQP 549
Cdd:NF033839 353 EVKPQPEKPKpEVKPQPEKPKPEVKPqpetPKPEVKPqpekPKPEVKPqPEKPKPEVKPQPEKPKPEVKPQPEKpkPEVK 432
|
170 180
....*....|....*....|....*
gi 30984464 550 PAAASTDEATQKALDALRDRQPPEP 574
Cdd:NF033839 433 PQPEKPKPEVKPQPEKPKPEVKPQP 457
|
|
| KAR9 |
pfam08580 |
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal ... |
452-572 |
9.16e-03 |
|
Yeast cortical protein KAR9; The KAR9 protein in Saccharomyces cerevisiae is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules. KAR9 localizes at the shmoo tip in mating cells and at the tip of the growing bud in anaphase.
Pssm-ID: 430088 [Multi-domain] Cd Length: 684 Bit Score: 41.74 E-value: 9.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 452 SEPPTPAG-PTTASSEPPTPAGPTTASS------------EPPTPAGRPPTP-AGRPPTPANPTAS------SEPPTPAG 511
Cdd:pfam08580 514 SETPTPALrPPSRPQPPPPGNRPRWNAStntndldvghnfKPLTLTTPSPTPsRSSRSSSTLPPVSplsrdkSRSPAPTC 593
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 30984464 512 RPPTPAGRPPTPANPTAS----------SEPPTPN---PEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPP 572
Cdd:pfam08580 594 RSVSRASRRRASRKPTRIgspnsrtsllDEPPYPKltlSKGLPRTPRNRQSYAGTSPSRSVSVSSGLGPQTRPG 667
|
|
| PRK13855 |
PRK13855 |
type IV secretion system protein VirB10; Provisional |
466-577 |
9.27e-03 |
|
type IV secretion system protein VirB10; Provisional
Pssm-ID: 172376 Cd Length: 376 Bit Score: 41.43 E-value: 9.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 466 EPPTPAGPTTASSEPPTPAgrpptPAGRPPTPAnptassepptpagrPPTPAGRPPTPANPTASSEPPTPNPEGAP--AP 543
Cdd:PRK13855 58 EPAPPSTMIATNTKPFHPA-----PIDVPPDPP--------------AAQEAVQPTAPPSAQSEPERNEPRPEETPifAY 118
|
90 100 110
....*....|....*....|....*....|....
gi 30984464 544 SSNEQPPAAASTDEATQKALDAlrDRQPPEPPCG 577
Cdd:PRK13855 119 SSGDQGGSKRAGHGDTDRRQDD--NREDNSLPAG 150
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
404-539 |
9.36e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 41.62 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 404 PAAGPRPPTPASRPPTPGAPPTPGAPPTPGAPPTPGAPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGPTTASSEPPTP 483
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 30984464 484 AGRPPTPAGRPPTPANPTASSEPPTPAGRPPTPAGRPPtpanptasSEPPTPNPEG 539
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA--------AARLTPTEEG 494
|
|
| PRK10819 |
PRK10819 |
transport protein TonB; Provisional |
453-575 |
9.72e-03 |
|
transport protein TonB; Provisional
Pssm-ID: 236768 [Multi-domain] Cd Length: 246 Bit Score: 40.44 E-value: 9.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30984464 453 EPPTPAGPTTASSEPPTPAGPTTASSEPPTPAGRP---PTPAGRPPTPA-----NPTASSEP-PTPAGRPPTPAGRPPTP 523
Cdd:PRK10819 40 ELPAPAQPISVTMVAPADLEPPQAVQPPPEPVVEPepePEPIPEPPKEApvvipKPEPKPKPkPKPKPKPVKKVEEQPKR 119
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 30984464 524 ANPTASSEPPTPNPEGAPA-PSSNEQPPAAASTDEATQKALDALRDRQPPEPP 575
Cdd:PRK10819 120 EVKPVEPRPASPFENTAPArPTSSTATAAASKPVTSVSSGPRALSRNQPQYPA 172
|
|
|