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Conserved domains on  [gi|311251487|ref|XP_003124635|]
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tumor necrosis factor receptor superfamily member 17 isoform X1 [Sus scrofa]

Protein Classification

TNFRSF17 domain-containing protein( domain architecture ID 10194108)

TNFRSF17 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
1-159 2.15e-98

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


:

Pssm-ID: 276919  Cd Length: 165  Bit Score: 281.22  E-value: 2.15e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487   1 MAQQCYQNEYFDRLLIACKPCRLRCSNTPPVTCQHYC-----NTMKGTNVILWTCLGLSLIVSLTVFILMFLLRKRSSGP 75
Cdd:cd13414    1 MAQQCFQNEYFDSLLHACKPCHLRCSNTPPLPCQSYCnasvtNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSEP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487  76 LRDELRNPGSVPQKGAGAdLGNGSEGRMGAETLLSRGL-EYTVEECTCEDCVQSEPKVDSDHFFPLPAMEEGATILVTTK 154
Cdd:cd13414   81 SKDELKNTGITLQNKANA-LADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                 ....*
gi 311251487 155 TNGYC 159
Cdd:cd13414  160 TNDYC 164
 
Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
1-159 2.15e-98

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


Pssm-ID: 276919  Cd Length: 165  Bit Score: 281.22  E-value: 2.15e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487   1 MAQQCYQNEYFDRLLIACKPCRLRCSNTPPVTCQHYC-----NTMKGTNVILWTCLGLSLIVSLTVFILMFLLRKRSSGP 75
Cdd:cd13414    1 MAQQCFQNEYFDSLLHACKPCHLRCSNTPPLPCQSYCnasvtNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSEP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487  76 LRDELRNPGSVPQKGAGAdLGNGSEGRMGAETLLSRGL-EYTVEECTCEDCVQSEPKVDSDHFFPLPAMEEGATILVTTK 154
Cdd:cd13414   81 SKDELKNTGITLQNKANA-LADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                 ....*
gi 311251487 155 TNGYC 159
Cdd:cd13414  160 TNDYC 164
BCMA-Tall_bind pfam09257
BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour ...
5-38 1.82e-14

BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour necrosis factor receptor superfamily member 17, BCMA, are required for binding to tumour necrosis factor ligand TALL-1.


Pssm-ID: 462727  Cd Length: 37  Bit Score: 64.04  E-value: 1.82e-14
                          10        20        30
                  ....*....|....*....|....*....|....
gi 311251487    5 CYQNEYFDRLLIACKPCRLRCSNTPPVTCQHYCN 38
Cdd:pfam09257   1 CSQNEYFDSLLHACKPCHLRCSNTPPLTCQRYCD 34
 
Name Accession Description Interval E-value
TNFRSF17 cd13414
Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell ...
1-159 2.15e-98

Tumor necrosis factor receptor superfamily member 17 (TNFRSF17), also known as B cell maturation antigen (BCMA), as well as TNFRSF13A; TNFRSF17 (also known as TNFRSF13A, B cell maturation antigen or BCMA, CD269) is predominantly expressed on terminally differentiated B cells, including multiple myeloma cells, and is important for B cell development and autoimmune response. Upon binding to its ligands, B cell activator of the TNF family (BAFF, also known as TNSF13B, TALL-1, BLyS, zTNF4), and a proliferation inducing ligand (APRIL), BCMA activates NF-kappaB and MAPK8/JNK; it has a higher affinity for APRIL than for BAFF. This receptor may transduce signals for cell survival and proliferation by binding to TRAF1, TRAF2, and TRAF3. BCMA expression has also been linked to a number of cancers, autoimmune disorders, and infectious diseases. It has been shown that although BCMA does not play a role in normal B cell homeostasis, it is critical for the long-term survival of bone marrow plasma cells. BCMA is expressed in a number of hematologic malignancies, including both Hodgkin's and non-Hodgkin's lymphomas, as well as primary tumor cells and cell lines of multiple myeloma, playing a critical role in protecting myeloma cells from apoptosis. BCMA has been identified as a promising chimeric antigen receptor (CAR) target for multiple myeloma; CARs are synthetic transmembrane proteins used to redirect autologous T cells with a new specificity for antigens on the surface of cancer cells. BCMA may also be implicated in the context of both viral and fungal infections; peripheral blood B cells isolated from HIV+ viremic patients have increased expression levels of BCMA, and significant decreased levels are found during fungal infection with C. neoformans. BCMA has been linked to mucosal immunity; its signaling in B cells and non-B cells is important for driving protective IgA responses. Also, abnormal expression or signaling of BCMA in the gut may be relevant to diseases, such as irritable bowel disease and ulcerative colitis.


Pssm-ID: 276919  Cd Length: 165  Bit Score: 281.22  E-value: 2.15e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487   1 MAQQCYQNEYFDRLLIACKPCRLRCSNTPPVTCQHYC-----NTMKGTNVILWTCLGLSLIVSLTVFILMFLLRKRSSGP 75
Cdd:cd13414    1 MAQQCFQNEYFDSLLHACKPCHLRCSNTPPLPCQSYCnasvtNSVKGTNVILWICLGLSLILSLTVFLLMFLLRKMSSEP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 311251487  76 LRDELRNPGSVPQKGAGAdLGNGSEGRMGAETLLSRGL-EYTVEECTCEDCVQSEPKVDSDHFFPLPAMEEGATILVTTK 154
Cdd:cd13414   81 SKDELKNTGITLQNKANA-LADLSESRIGEEILLPRSLlEYTVEECTCEDCVKSKPKADSDHFFPLPAMEEGATILVTTK 159

                 ....*
gi 311251487 155 TNGYC 159
Cdd:cd13414  160 TNDYC 164
BCMA-Tall_bind pfam09257
BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour ...
5-38 1.82e-14

BCMA, TALL-1 binding; Members of this family, which are predominantly found in the tumour necrosis factor receptor superfamily member 17, BCMA, are required for binding to tumour necrosis factor ligand TALL-1.


Pssm-ID: 462727  Cd Length: 37  Bit Score: 64.04  E-value: 1.82e-14
                          10        20        30
                  ....*....|....*....|....*....|....
gi 311251487    5 CYQNEYFDRLLIACKPCRLRCSNTPPVTCQHYCN 38
Cdd:pfam09257   1 CSQNEYFDSLLHACKPCHLRCSNTPPLTCQRYCD 34
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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