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Conserved domains on  [gi|353227494|emb|CCA78002|]
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hypothetical protein PIIN_00714 [Serendipita indica DSM 11827]

Protein Classification

FYRN and FYRC domain-containing protein( domain architecture ID 10532223)

FYRN and FYRC domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 317-366 2.26e-15

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


:

Pssm-ID: 461787  Cd Length: 51  Bit Score: 70.23  E-value: 2.26e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 353227494  317 GMFTLLSLGQIQTKQDL-ATTKALYPIGYKCERRWFSTKNPKILVRYTCSI 366
Cdd:pfam05964   1 GSLTVLSLGEIVPDRPAfHTERYIYPVGYKSTRLYWSTKDPRKRCRYTCEI 51
FYRC super family cl02651
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 375-449 7.96e-13

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


The actual alignment was detected with superfamily member pfam05965:

Pssm-ID: 470645  Cd Length: 83  Bit Score: 63.78  E-value: 7.96e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353227494  375 PVFVVTPEDAPEE--RGHSATSAWWNIYTeglRVRNQPEQAVM--------NGDEMFGLHDNVIKALLQELPGAEELVGY 444
Cdd:pfam05965   2 PLFRVTVEEDPDEsfEGSSPTKCWSMVLE---RVQELRREAGLklklpesiSGEDMFGLTHPAVVRLIESLPGAEKCTNY 78


                  ....*
gi 353227494  445 VWRTF 449
Cdd:pfam05965  79 KFRYG 83
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 317-366 2.26e-15

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 70.23  E-value: 2.26e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 353227494  317 GMFTLLSLGQIQTKQDL-ATTKALYPIGYKCERRWFSTKNPKILVRYTCSI 366
Cdd:pfam05964   1 GSLTVLSLGEIVPDRPAfHTERYIYPVGYKSTRLYWSTKDPRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 375-449 7.96e-13

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 63.78  E-value: 7.96e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353227494  375 PVFVVTPEDAPEE--RGHSATSAWWNIYTeglRVRNQPEQAVM--------NGDEMFGLHDNVIKALLQELPGAEELVGY 444
Cdd:pfam05965   2 PLFRVTVEEDPDEsfEGSSPTKCWSMVLE---RVQELRREAGLklklpesiSGEDMFGLTHPAVVRLIESLPGAEKCTNY 78


                  ....*
gi 353227494  445 VWRTF 449
Cdd:pfam05965  79 KFRYG 83
FYRC smart00542
FY-rich domain, C-terminal region; is sometimes closely juxtaposed with the N-terminal region ...
 376-444 6.22e-07

FY-rich domain, C-terminal region; is sometimes closely juxtaposed with the N-terminal region (FYRN), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 197781  Cd Length: 86  Bit Score: 47.29  E-value: 6.22e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 353227494   376 VFVVTPEDAPEE--RGHSATSAWWNIYtegLRVRNQPEQAV--------MNGDEMFGLHDNVIKALLQELPGAEELVGY 444
Cdd:smart00542   1 LFRVEIESDPGEvfKGESPEKCWEMVL---ERVQEARIAADllqllpegVSGEEMFGLSSPAVVKLIEALPGVHQCTNY 76
FYRN smart00541
FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region ...
 335-368 7.86e-06

FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region (FYRC), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 128814  Cd Length: 44  Bit Score: 43.04  E-value: 7.86e-06
                           10        20        30
                   ....*....|....*....|....*....|....
gi 353227494   335 TTKALYPIGYKCERRWFSTKNPKILVRYTCSIEA 368
Cdd:smart00541  11 SESAIFPVGYKSTRKYWSVKDPNRRCLYSCVIDE 44
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 317-366 2.26e-15

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 70.23  E-value: 2.26e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 353227494  317 GMFTLLSLGQIQTKQDL-ATTKALYPIGYKCERRWFSTKNPKILVRYTCSI 366
Cdd:pfam05964   1 GSLTVLSLGEIVPDRPAfHTERYIYPVGYKSTRLYWSTKDPRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 375-449 7.96e-13

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 63.78  E-value: 7.96e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 353227494  375 PVFVVTPEDAPEE--RGHSATSAWWNIYTeglRVRNQPEQAVM--------NGDEMFGLHDNVIKALLQELPGAEELVGY 444
Cdd:pfam05965   2 PLFRVTVEEDPDEsfEGSSPTKCWSMVLE---RVQELRREAGLklklpesiSGEDMFGLTHPAVVRLIESLPGAEKCTNY 78


                  ....*
gi 353227494  445 VWRTF 449
Cdd:pfam05965  79 KFRYG 83
FYRC smart00542
FY-rich domain, C-terminal region; is sometimes closely juxtaposed with the N-terminal region ...
 376-444 6.22e-07

FY-rich domain, C-terminal region; is sometimes closely juxtaposed with the N-terminal region (FYRN), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 197781  Cd Length: 86  Bit Score: 47.29  E-value: 6.22e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 353227494   376 VFVVTPEDAPEE--RGHSATSAWWNIYtegLRVRNQPEQAV--------MNGDEMFGLHDNVIKALLQELPGAEELVGY 444
Cdd:smart00542   1 LFRVEIESDPGEvfKGESPEKCWEMVL---ERVQEARIAADllqllpegVSGEEMFGLSSPAVVKLIEALPGVHQCTNY 76
FYRN smart00541
FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region ...
 335-368 7.86e-06

FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region (FYRC), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 128814  Cd Length: 44  Bit Score: 43.04  E-value: 7.86e-06
                           10        20        30
                   ....*....|....*....|....*....|....
gi 353227494   335 TTKALYPIGYKCERRWFSTKNPKILVRYTCSIEA 368
Cdd:smart00541  11 SESAIFPVGYKSTRKYWSVKDPNRRCLYSCVIDE 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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