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Conserved domains on  [gi|37537251|gb|AAH39317|]
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Coiled-coil domain containing 65 [Homo sapiens]

Protein Classification

NYD-SP28 domain-containing protein( domain architecture ID 10632156)

NYD-SP28 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NYD-SP28 pfam14772
Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in ...
 27-124 9.25e-25

Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization.


:

Pssm-ID: 464307 [Multi-domain]  Cd Length: 102  Bit Score: 98.05  E-value: 9.25e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37537251    27 AEEEMAKKKERLLSQFLKDKLAKEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDL 106
Cdd:pfam14772   5 AEEEQRRRKEEELRRFRKEKLEEEAKSSQEKFEKINQRWRSILRKNKPQELREELEEQKQACERIIDRKDKLIKELQQEL 84

                          90
                  ....*....|....*...
gi 37537251   107 SEAEEQYAHALRSHLHNV 124
Cdd:pfam14772  85 KEADEQYVKALRKQAEDI 102
 
Name Accession Description Interval E-value
NYD-SP28 pfam14772
Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in ...
 27-124 9.25e-25

Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization.


Pssm-ID: 464307 [Multi-domain]  Cd Length: 102  Bit Score: 98.05  E-value: 9.25e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37537251    27 AEEEMAKKKERLLSQFLKDKLAKEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDL 106
Cdd:pfam14772   5 AEEEQRRRKEEELRRFRKEKLEEEAKSSQEKFEKINQRWRSILRKNKPQELREELEEQKQACERIIDRKDKLIKELQQEL 84

                          90
                  ....*....|....*...
gi 37537251   107 SEAEEQYAHALRSHLHNV 124
Cdd:pfam14772  85 KEADEQYVKALRKQAEDI 102
 
Name Accession Description Interval E-value
NYD-SP28 pfam14772
Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in ...
 27-124 9.25e-25

Sperm tail; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization.


Pssm-ID: 464307 [Multi-domain]  Cd Length: 102  Bit Score: 98.05  E-value: 9.25e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 37537251    27 AEEEMAKKKERLLSQFLKDKLAKEEHNSALNLNKINTQWRTVLREVKTRELHKDIEILSQTFERVVDCKDNVIKSLAKDL 106
Cdd:pfam14772   5 AEEEQRRRKEEELRRFRKEKLEEEAKSSQEKFEKINQRWRSILRKNKPQELREELEEQKQACERIIDRKDKLIKELQQEL 84

                          90
                  ....*....|....*...
gi 37537251   107 SEAEEQYAHALRSHLHNV 124
Cdd:pfam14772  85 KEADEQYVKALRKQAEDI 102
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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