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Conserved domains on  [gi|379976139|gb|AFD21072|]
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wzy [Escherichia coli]

Protein Classification

EpsG family protein( domain architecture ID 10632861)

EpsG family protein similar to Bacillus subtilis transmembrane protein EpsG, which is involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 28-307 4.93e-09

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


:

Pssm-ID: 434295  Cd Length: 325  Bit Score: 56.95  E-value: 4.93e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139   28 FRLLFIVFFSLSFFSYYTN--GEDWSVYYLRFIEDEGLFTSFEFGFVIILKLLLIVSD---DNFGLAILLYYFLCFVLLS 102
Cdd:pfam14897   1 LILFLIVFLFLFLLAGFRYgvGTDWFSYVEIYELILYLSYLFLFGFEPGYVLLNSLVKsfgNNYQFFLFILALITLILLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  103 LILKKYKVNEPLFLGCL-LLLFGYNLFLEQLRQLLACIIVFYAmLLYNQNKNLIESCILVITASTFHVSAVIILPTIFLI 181
Cdd:pfam14897  81 YFIRKYSKNPFLLALLLfLLLLYFLLSMNQIRQGIAISIILLA-LAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFIL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  182 SFRNVTTFIIITVSSITSIVVFMIALYSAISSLAAMSFVFAKIDYYLHQNPVVLNFGwLNILDALFILFYMRYRNAIDRQ 261
Cdd:pfam14897 160 NKKLKKKVILLIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVG-LLFLLFILFLLLLKYIREEKKK 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 379976139  262 ININILTRIIFVGSVIHLFSGTITFLARVCFYFYFVGVYIYCYSLN 307
Cdd:pfam14897 239 SDKFFLNILLFGLILFLLLLFLSVIFDRLALYFSIFIIIFLPPILK 284
 
Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 28-307 4.93e-09

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


Pssm-ID: 434295  Cd Length: 325  Bit Score: 56.95  E-value: 4.93e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139   28 FRLLFIVFFSLSFFSYYTN--GEDWSVYYLRFIEDEGLFTSFEFGFVIILKLLLIVSD---DNFGLAILLYYFLCFVLLS 102
Cdd:pfam14897   1 LILFLIVFLFLFLLAGFRYgvGTDWFSYVEIYELILYLSYLFLFGFEPGYVLLNSLVKsfgNNYQFFLFILALITLILLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  103 LILKKYKVNEPLFLGCL-LLLFGYNLFLEQLRQLLACIIVFYAmLLYNQNKNLIESCILVITASTFHVSAVIILPTIFLI 181
Cdd:pfam14897  81 YFIRKYSKNPFLLALLLfLLLLYFLLSMNQIRQGIAISIILLA-LAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFIL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  182 SFRNVTTFIIITVSSITSIVVFMIALYSAISSLAAMSFVFAKIDYYLHQNPVVLNFGwLNILDALFILFYMRYRNAIDRQ 261
Cdd:pfam14897 160 NKKLKKKVILLIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVG-LLFLLFILFLLLLKYIREEKKK 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 379976139  262 ININILTRIIFVGSVIHLFSGTITFLARVCFYFYFVGVYIYCYSLN 307
Cdd:pfam14897 239 SDKFFLNILLFGLILFLLLLFLSVIFDRLALYFSIFIIIFLPPILK 284
 
Name Accession Description Interval E-value
EpsG pfam14897
EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These ...
 28-307 4.93e-09

EpsG family; This family of proteins are related to the EpsG protein from B. subtilis. These proteins are likely glycosyl transferases belonging to the membrane protein GT-C clan.


Pssm-ID: 434295  Cd Length: 325  Bit Score: 56.95  E-value: 4.93e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139   28 FRLLFIVFFSLSFFSYYTN--GEDWSVYYLRFIEDEGLFTSFEFGFVIILKLLLIVSD---DNFGLAILLYYFLCFVLLS 102
Cdd:pfam14897   1 LILFLIVFLFLFLLAGFRYgvGTDWFSYVEIYELILYLSYLFLFGFEPGYVLLNSLVKsfgNNYQFFLFILALITLILLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  103 LILKKYKVNEPLFLGCL-LLLFGYNLFLEQLRQLLACIIVFYAmLLYNQNKNLIESCILVITASTFHVSAVIILPTIFLI 181
Cdd:pfam14897  81 YFIRKYSKNPFLLALLLfLLLLYFLLSMNQIRQGIAISIILLA-LAYLIKKKWKKFLLLVILASLFHSSAIIFLPLYFIL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379976139  182 SFRNVTTFIIITVSSITSIVVFMIALYSAISSLAAMSFVFAKIDYYLHQNPVVLNFGwLNILDALFILFYMRYRNAIDRQ 261
Cdd:pfam14897 160 NKKLKKKVILLIFSFILLLFLFFDNILSLLSPLLISERYASYLESDYYGGGTGIIVG-LLFLLFILFLLLLKYIREEKKK 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 379976139  262 ININILTRIIFVGSVIHLFSGTITFLARVCFYFYFVGVYIYCYSLN 307
Cdd:pfam14897 239 SDKFFLNILLFGLILFLLLLFLSVIFDRLALYFSIFIIIFLPPILK 284
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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