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Conserved domains on  [gi|3891676]
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Chain B, CIRCULARLY PERMUTED BB2-CRYSTALLIN

Protein Classification

Crystall and XTALbg domain-containing protein( domain architecture ID 10440421)

Crystall and XTALbg domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
3-85 5.23e-41

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


:

Pssm-ID: 425430  Cd Length: 82  Bit Score: 132.62  E-value: 5.23e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      3 KIILYENPNFTGKKMEIVDDdVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDNSDFGAPHPQVQSV 82
Cdd:pfam00030   1 KIVLFEKENFQGRSMELTDD-CPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 3891676     83 RRI 85
Cdd:pfam00030  80 RPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
93-175 1.95e-32

Beta/gamma crystallins; Beta/gamma crystallins


:

Pssm-ID: 214583  Cd Length: 82  Bit Score: 111.06  E-value: 1.95e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      93 KIIIFEQENFQGHSHELSGPCPNLKETG-MEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWTSSrrTDSLSS 171
Cdd:smart00247   1 KITLYEDENFQGRSYELSDDCPSLQDYGsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGF--NDQISS 78

                   ....
gi 3891676     172 LRPI 175
Cdd:smart00247  79 IRRI 82
 
Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
3-85 5.23e-41

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 425430  Cd Length: 82  Bit Score: 132.62  E-value: 5.23e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      3 KIILYENPNFTGKKMEIVDDdVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDNSDFGAPHPQVQSV 82
Cdd:pfam00030   1 KIVLFEKENFQGRSMELTDD-CPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 3891676     83 RRI 85
Cdd:pfam00030  80 RPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
3-85 2.55e-38

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 126.08  E-value: 2.55e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676       3 KIILYENPNFTGKKMEIvDDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDNSDFGAPHPQVQSV 82
Cdd:smart00247   1 KITLYEDENFQGRSYEL-SDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSI 79

                   ...
gi 3891676      83 RRI 85
Cdd:smart00247  80 RRI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
93-175 1.95e-32

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 111.06  E-value: 1.95e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      93 KIIIFEQENFQGHSHELSGPCPNLKETG-MEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWTSSrrTDSLSS 171
Cdd:smart00247   1 KITLYEDENFQGRSYELSDDCPSLQDYGsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGF--NDQISS 78

                   ....
gi 3891676     172 LRPI 175
Cdd:smart00247  79 IRRI 82
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
93-175 2.39e-32

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 425430  Cd Length: 82  Bit Score: 110.66  E-value: 2.39e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676     93 KIIIFEQENFQGHSHELSGPCPNLKETG-MEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWtsSRRTDSLSS 171
Cdd:pfam00030   1 KIVLFEKENFQGRSMELTDDCPSLQERGfNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDW--GAPNDRIGS 78

                  ....
gi 3891676    172 LRPI 175
Cdd:pfam00030  79 LRPI 82
 
Name Accession Description Interval E-value
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
3-85 5.23e-41

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 425430  Cd Length: 82  Bit Score: 132.62  E-value: 5.23e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      3 KIILYENPNFTGKKMEIVDDdVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDNSDFGAPHPQVQSV 82
Cdd:pfam00030   1 KIVLFEKENFQGRSMELTDD-CPSLQERGFNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDWGAPNDRIGSL 79

                  ...
gi 3891676     83 RRI 85
Cdd:pfam00030  80 RPI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
3-85 2.55e-38

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 126.08  E-value: 2.55e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676       3 KIILYENPNFTGKKMEIvDDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDNSDFGAPHPQVQSV 82
Cdd:smart00247   1 KITLYEDENFQGRSYEL-SDDCPSLQDYGSRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGFNDQISSI 79

                   ...
gi 3891676      83 RRI 85
Cdd:smart00247  80 RRI 82
XTALbg smart00247
Beta/gamma crystallins; Beta/gamma crystallins
93-175 1.95e-32

Beta/gamma crystallins; Beta/gamma crystallins


Pssm-ID: 214583  Cd Length: 82  Bit Score: 111.06  E-value: 1.95e-32
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676      93 KIIIFEQENFQGHSHELSGPCPNLKETG-MEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWTSSrrTDSLSS 171
Cdd:smart00247   1 KITLYEDENFQGRSYELSDDCPSLQDYGsRDNVSSVRVESGCWVLYEQPNYRGRQYVLEPGEYPDYQEWGGF--NDQISS 78

                   ....
gi 3891676     172 LRPI 175
Cdd:smart00247  79 IRRI 82
Crystall pfam00030
Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity ...
93-175 2.39e-32

Beta/Gamma crystallin; The alignment comprises two Greek key motifs since the similarity between them is very low.


Pssm-ID: 425430  Cd Length: 82  Bit Score: 110.66  E-value: 2.39e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3891676     93 KIIIFEQENFQGHSHELSGPCPNLKETG-MEKAGSVLVQAGPWVGYEQANCKGEQFVFEKGEYPRWDSWtsSRRTDSLSS 171
Cdd:pfam00030   1 KIVLFEKENFQGRSMELTDDCPSLQERGfNSRVNSIRVLSGAWVLYEHPNFRGRQYVLEPGEYPDWSDW--GAPNDRIGS 78

                  ....
gi 3891676    172 LRPI 175
Cdd:pfam00030  79 LRPI 82
Inhibitor_I36 pfam03995
Peptidase inhibitor family I36; This domain is currently only found in a small set of S. ...
6-56 2.54e-03

Peptidase inhibitor family I36; This domain is currently only found in a small set of S. coelicolor secreted proteins. There are four conserved cysteines that probably form two disulphide bonds. Proteins 2SCK31.15C and SCO3675 also have probable beta-propellers at their C-termini. This family includes Streptomyces nigrescens SmpI, a known peptidase inhibitor of known structure. This protein has a crystallin like fold pfam00030 and is distantly related by sequence. It is not known whether other members of this family are peptidase inhibitors.


Pssm-ID: 427638  Cd Length: 69  Bit Score: 35.05  E-value: 2.54e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 3891676      6 LYENPNFTGKKMEIVDDDvpSFHAHGYQEKVSSVRVQSGTWV-GYQYPGYRG 56
Cdd:pfam03995  15 LWSGANGTGRMAELSGSD--ALVGAGMNDKARSVWNRTGSWVtVYTDANYGG 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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