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Conserved domains on  [gi|401835064|gb|AFQ23278|]
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ATP synthase F0 subunit 6, partial (mitochondrion) [Drosophila melanogaster]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-196 4.38e-99

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 285.91  E-value: 4.38e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   1 TFLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSgHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTL 80
Cdd:MTH00157  24 TFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  81 SLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMS 160
Cdd:MTH00157 103 SLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLS 182

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 401835064 161 YMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00157 183 SMILSILILIQILLLILESAVAIIQSYVFSVLSTLY 218
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-196 4.38e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 285.91  E-value: 4.38e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   1 TFLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSgHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTL 80
Cdd:MTH00157  24 TFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  81 SLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMS 160
Cdd:MTH00157 103 SLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLS 182

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 401835064 161 YMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00157 183 SMILSILILIQILLLILESAVAIIQSYVFSVLSTLY 218
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-196 6.80e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 161.22  E-value: 6.80e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064    5 LLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIFiSLFSLILFNNFMGLFPYIFTSTSHLTLTLSLAL 84
Cdd:TIGR01131  30 LISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLFILISNLLGLIPYSFTPTSHLSFTLGLAL 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   85 PLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPS-MSYML 163
Cdd:TIGR01131 109 PLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSlMSSAI 188

                         170       180       190
                  ....*....|....*....|....*....|...
gi 401835064  164 VTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:TIGR01131 189 FALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 49-196 3.05e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.77  E-value: 3.05e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  49 IFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNI 128
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 401835064 129 IRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP-synt_A pfam00119
ATP synthase A chain;
14-196 6.27e-29

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 106.81  E-value: 6.27e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   14 LMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLF---PYIFTSTSHLTLTLSLALPLWLCF 90
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   91 MLYGWINH-TQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGH---LLLTLLGNTGPSMSYMLVTF 166
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|
gi 401835064  167 LLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 52-196 1.07e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.52  E-value: 1.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  52 SLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINH-TQHMFAHLVPQGTPAiLMPFMVCIETISNIIR 130
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 401835064 131 PGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLmaQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-196 4.38e-99

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 285.91  E-value: 4.38e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   1 TFLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSgHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTL 80
Cdd:MTH00157  24 TFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSFILFNNFLGLFPYIFTSTSHLSLTL 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  81 SLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMS 160
Cdd:MTH00157 103 SLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLS 182

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 401835064 161 YMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00157 183 SMILSILILIQILLLILESAVAIIQSYVFSVLSTLY 218
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-196 6.80e-50

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 161.22  E-value: 6.80e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064    5 LLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIFiSLFSLILFNNFMGLFPYIFTSTSHLTLTLSLAL 84
Cdd:TIGR01131  30 LISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFLFILISNLLGLIPYSFTPTSHLSFTLGLAL 108

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   85 PLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPS-MSYML 163
Cdd:TIGR01131 109 PLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLLFSlMSSAI 188

                         170       180       190
                  ....*....|....*....|....*....|...
gi 401835064  164 VTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:TIGR01131 189 FALLLLILVALIILEIFVAFIQAYVFTLLTCLY 221
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 3-196 1.97e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 157.50  E-value: 1.97e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   3 LGLLMIPSIYWLMPSRYNIMWNsILLTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSL 82
Cdd:MTH00176  29 LFLLLMPSSVWFCPSKLQVFML-MFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSL 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  83 ALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPS---M 159
Cdd:MTH00176 108 ALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGllpV 187

                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 401835064 160 SYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00176 188 SPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLY 224
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 49-196 3.05e-43

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 141.77  E-value: 3.05e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  49 IFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNI 128
Cdd:cd00310    7 LLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISEL 86

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 401835064 129 IRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:cd00310   87 IRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 2-196 2.85e-36

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 126.13  E-value: 2.85e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   2 FLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGpSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLS 81
Cdd:MTH00173  28 LMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFS 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  82 LALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPS--- 158
Cdd:MTH00173 107 LALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYLSSslf 186

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 401835064 159 -MSYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00173 187 sSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLY 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 5-196 2.23e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 123.78  E-value: 2.23e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   5 LLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTfIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLAL 84
Cdd:MTH00120  29 LLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWAL-ILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAI 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  85 PLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLG-------NTGP 157
Cdd:MTH00120 108 PLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQLIStatlnllPTMP 187

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 401835064 158 SMSYMLVTFLLMaqiaLLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00120 188 TLSLLTLIILLL----LTILELAVAMIQAYVFVLLLSLY 222
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 5-196 1.04e-34

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 122.39  E-value: 1.04e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   5 LLMIPSIYWLmPSRYNIMWNSILLTLhkeFKTLLGPSGHNGSTFI--FISLFSLILFNNFMGLFPYIFTSTSHLTLTLSL 82
Cdd:MTH00035  33 LFFINPTNWL-PSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglLTTVFILILSINVLGLFPYAFTSTSHISLTYSL 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  83 ALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNT--GPSMS 160
Cdd:MTH00035 109 GIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLSTAiwELSNS 188

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 401835064 161 YMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00035 189 PLISIITLIIFFLLFILEIGVACIQAYVFTALVHFY 224
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-196 3.32e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 118.13  E-value: 3.32e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   1 TFLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGStFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTL 80
Cdd:MTH00179  25 LLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLNL 103

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  81 SLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNT---GP 157
Cdd:MTH00179 104 GLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAvfvLM 183

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 401835064 158 SMSYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00179 184 NFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLY 222
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 38-196 2.26e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 116.13  E-value: 2.26e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  38 LGPSGHNGSTfIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMP 117
Cdd:MTH00132  62 LNVGGHKWAL-LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIP 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064 118 FMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMAQIALL---VLESAVAMIQSYVFAVLST 194
Cdd:MTH00132 141 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLS 220


                 ..
gi 401835064 195 LY 196
Cdd:MTH00132 221 LY 222
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 5-196 2.62e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 115.83  E-value: 2.62e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   5 LLMIPSIYWLmPSRYNIMWNSILLTLHKEFKTLLGPSGHNGStFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLAL 84
Cdd:MTH00073  30 LFPTPTNKWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAV 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  85 PLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLV 164
Cdd:MTH00073 108 PLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMP 187

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 401835064 165 TFLLMAQIALL---VLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00073 188 TVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLY 222
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 53-196 6.29e-32

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 115.05  E-value: 6.29e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  53 LFSLILF---NNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNII 129
Cdd:MTH00101  72 LMSLILFigsTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFI 151

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 401835064 130 RPGTLAVRLTANMIAGHLLLTLLGN-----TGPSMSYMLVTFLLMaqIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00101 152 QPMALAVRLTANITAGHLLIHLIGGatlalMSISTTTALITFIIL--ILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-196 1.79e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 114.06  E-value: 1.79e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   1 TFLGLLMIPSIYWLMPSRYNIMWNSILLTLHKEFKTLLGpSGHNGSTFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTL 80
Cdd:MTH00005  29 NFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISALFTMIILMNLSGLLPYVFSTSSHLIFTL 107

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  81 SLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSM- 159
Cdd:MTH00005 108 TLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGIYAASAl 187

                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 401835064 160 --SYMLVTFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00005 188 fsSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
ATP-synt_A pfam00119
ATP synthase A chain;
14-196 6.27e-29

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 106.81  E-value: 6.27e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   14 LMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIFISLFSLILFNNFMGLF---PYIFTSTSHLTLTLSLALPLWLCF 90
Cdd:pfam00119  25 LVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFTVTADINVTLALALIVFLLV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064   91 MLYGWINH-TQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGH---LLLTLLGNTGPSMSYMLVTF 166
Cdd:pfam00119 105 HYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHlllLLLAGLIFALLSAGFLLGVI 184

                         170       180       190
                  ....*....|....*....|....*....|
gi 401835064  167 LLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:pfam00119 185 PPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 14-196 2.23e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 100.50  E-value: 2.23e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  14 LMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIfISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLY 93
Cdd:MTH00172  40 LIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLA 118

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  94 GWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSM---SYMLVTFLLMA 170
Cdd:MTH00172 119 GFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMlcaSGFLSLFPLLI 198

                        170       180
                 ....*....|....*....|....*.
gi 401835064 171 QIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00172 199 MVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 13-196 6.06e-24

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 94.69  E-value: 6.06e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  13 WLMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIFiSLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFML 92
Cdd:MTH00175  50 KLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTL 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  93 YGWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYM----LVTFLL 168
Cdd:MTH00175 129 LGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgliiLSLFPM 208

                        170       180
                 ....*....|....*....|....*...
gi 401835064 169 MAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00175 209 LIMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 52-196 1.07e-22

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 90.52  E-value: 1.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  52 SLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINH-TQHMFAHLVPQGTPAiLMPFMVCIETISNIIR 130
Cdd:COG0356   63 TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELAR 141

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 401835064 131 PGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLmaQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:COG0356  142 PLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 49-196 5.18e-19

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 80.99  E-value: 5.18e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  49 IFISLFSLILFNNFMGLFP-YIFTSTSHLTLTLSLALPLWLCFMLYG-WINHTQHMFAHLVPQgtpaiLMPFMVCIETIS 126
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064 127 NIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMAqIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 14-196 2.61e-18

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 79.98  E-value: 2.61e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  14 LMPSRYNIMWNSILLTLHKEFKTLLGPSGHNGSTFIfISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLY 93
Cdd:MTH00174  59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  94 GWINHTQHMFAHLVPQGTPAILMPFMVCIETISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMAQIA 173
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217

                        170       180
                 ....*....|....*....|....*..
gi 401835064 174 LL----VLESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00174 218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 51-196 1.02e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 59.76  E-value: 1.02e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  51 ISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWL-----CFMLYGWINHTQHMFAhlvpqGTPAILMPFMVCIETI 125
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFitqyaAIKAHGIKGYLAHLTG-----GTHWSLWIIMIPIEFI 249

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064 126 SNIIRPGTLAVRLTANMIAGHLLLtllgntgpsMSYMLVTFLLMAQIALLV-----------LESAVAMIQSYVFAVLST 194
Cdd:PRK13419 250 GLFTKPFALTVRLFANMTAGHIVI---------LSLIFISFILKSYIVAVAvsvpfaifiylLELFVAFLQAYIFTMLSA 320


                 ..
gi 401835064 195 LY 196
Cdd:PRK13419 321 LF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 42-196 9.41e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 56.82  E-value: 9.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  42 GHNGSTFIFiSLFSLILFNNFMGLFPYI-----------------------------------FTSTSHLTLTLSLALPL 86
Cdd:PRK13417 154 GHSYYHYIF-TLFFFILFCNLMGLVPSVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLT 232

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  87 WLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETI-SNIIRPGTLAVRLTANMIAGHLLLT-LLGNTGPSMSYMLV 164
Cdd:PRK13417 233 MFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILaLMGFIFQFQSWGIV 312

                        170       180       190
                 ....*....|....*....|....*....|..
gi 401835064 165 TFLLMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:PRK13417 313 PVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 46-196 4.23e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 51.13  E-value: 4.23e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  46 STFIFISLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFMLYGWINhtQHMFAHLVPQGTPAILMPF-MVCIET 124
Cdd:MTH00087  51 SSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEI 128

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 401835064 125 ISNIIRPGTLAVRLTANMIAGHLLLTLLGNTGPSMSYMLVTFLLMaqiallvlESAVAMIQSYVFAVLSTLY 196
Cdd:MTH00087 129 VSELSRPLALTLRLTVNLMVGHLISSLLNFLGEKYVWLSILAIMM--------ECFVAFIQSYIFSRLIYLY 192
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 14-196 4.71e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 48.20  E-value: 4.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  14 LMPSRYNIMWNSILLTLHKEFKTLLgpSGHNGSTFIFI-SLFSLILFNNFMGLFPYIFTSTSHLTLTLSLALPLWLCFML 92
Cdd:PRK13420  43 LDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHW 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  93 YG-----WINHTQHmfaHLVPQgtpAILMPFMVcietISNIIRPGTLAVRLTANMIAGHLLLTLlgntgpsmsyMLVTFL 167
Cdd:PRK13420 121 FGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGNIMSLELAALL----------VLLVAG 180

                        170       180
                 ....*....|....*....|....*....
gi 401835064 168 LMAQIALLVLESAVAMIQSYVFAVLSTLY 196
Cdd:PRK13420 181 FLVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 52-145 2.86e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.87  E-value: 2.86e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 401835064  52 SLFSLILFNNFMGL----FPYIFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILMPFMVCIETISN 127
Cdd:MTH00050  24 YYYSVVLFIVLFLFllyrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISY 103

                         90
                 ....*....|....*...
gi 401835064 128 IIRPGTLAVRLTANMIAG 145
Cdd:MTH00050 104 IIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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