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Conserved domains on  [gi|402467782|gb|EJW03031|]
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hypothetical protein EDEG_02581 [Edhazardia aedis USNM 41457]

Protein Classification

FYRN and FYRC domain-containing protein( domain architecture ID 10532223)

FYRN and FYRC domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 80-134 1.57e-09

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


:

Pssm-ID: 461787  Cd Length: 51  Bit Score: 51.74  E-value: 1.57e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 402467782   80 MSILNLGILPEKEvDKFHSEDVIFPLGYTAKRKYK-VHDktvkkyPGDKMFYFCCV 134
Cdd:pfam05964   3 LTVLSLGEIVPDR-PAFHTERYIYPVGYKSTRLYWsTKD------PRKRCRYTCEI 51
FYRC super family cl02651
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 141-199 1.61e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


The actual alignment was detected with superfamily member pfam05965:

Pssm-ID: 470645  Cd Length: 83  Bit Score: 36.05  E-value: 1.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 402467782  141 EIKSQDNRVWSG---KNVWVDFCKSFQEK----------VEMQNVAEFFGLTHPTLQKMIEGMGDISHFKKY 199
Cdd:pfam05965   7 TVEEDPDESFEGsspTKCWSMVLERVQELrreaglklklPESISGEDMFGLTHPAVVRLIESLPGAEKCTNY 78
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 80-134 1.57e-09

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 51.74  E-value: 1.57e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 402467782   80 MSILNLGILPEKEvDKFHSEDVIFPLGYTAKRKYK-VHDktvkkyPGDKMFYFCCV 134
Cdd:pfam05964   3 LTVLSLGEIVPDR-PAFHTERYIYPVGYKSTRLYWsTKD------PRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 141-199 1.61e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 36.05  E-value: 1.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 402467782  141 EIKSQDNRVWSG---KNVWVDFCKSFQEK----------VEMQNVAEFFGLTHPTLQKMIEGMGDISHFKKY 199
Cdd:pfam05965   7 TVEEDPDESFEGsspTKCWSMVLERVQELrreaglklklPESISGEDMFGLTHPAVVRLIESLPGAEKCTNY 78
FYRN smart00541
FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region ...
 96-136 3.24e-03

FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region (FYRC), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 128814  Cd Length: 44  Bit Score: 34.18  E-value: 3.24e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 402467782    96 FHSEDVIFPLGYTAKRKYkvhdkTVKKYPGDKMFYFCCVKE 136
Cdd:smart00541   9 FHSESAIFPVGYKSTRKY-----WSVKDPNRRCLYSCVIDE 44
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 80-134 1.57e-09

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 51.74  E-value: 1.57e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 402467782   80 MSILNLGILPEKEvDKFHSEDVIFPLGYTAKRKYK-VHDktvkkyPGDKMFYFCCV 134
Cdd:pfam05964   3 LTVLSLGEIVPDR-PAFHTERYIYPVGYKSTRLYWsTKD------PRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 141-199 1.61e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 36.05  E-value: 1.61e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 402467782  141 EIKSQDNRVWSG---KNVWVDFCKSFQEK----------VEMQNVAEFFGLTHPTLQKMIEGMGDISHFKKY 199
Cdd:pfam05965   7 TVEEDPDESFEGsspTKCWSMVLERVQELrreaglklklPESISGEDMFGLTHPAVVRLIESLPGAEKCTNY 78
FYRN smart00541
FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region ...
 96-136 3.24e-03

FY-rich domain, N-terminal region; is sometimes closely juxtaposed with the C-terminal region (FYRC), but sometimes is far distant. Unknown function, but occurs frequently in chromatin-associated proteins.


Pssm-ID: 128814  Cd Length: 44  Bit Score: 34.18  E-value: 3.24e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|.
gi 402467782    96 FHSEDVIFPLGYTAKRKYkvhdkTVKKYPGDKMFYFCCVKE 136
Cdd:smart00541   9 FHSESAIFPVGYKSTRKY-----WSVKDPNRRCLYSCVIDE 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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