|
Name |
Accession |
Description |
Interval |
E-value |
| rimK_fam |
TIGR00768 |
alpha-L-glutamate ligase, RimK family; This family, related to bacterial glutathione ... |
5-299 |
2.11e-90 |
|
alpha-L-glutamate ligase, RimK family; This family, related to bacterial glutathione synthetases, contains at least three different alpha-L-glutamate ligases. One is RimK, as in E. coli, which adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6, but not to Lys-Glu mutants. Most species with a member of this subfamily lack an S6 homolog ending in Glu-Glu, however. Members in Methanococcus jannaschii act instead as a tetrahydromethanopterin:alpha-l-glutamate ligase (MJ0620) and a gamma-F420-2:alpha-l-glutamate ligase (MJ1001).
Pssm-ID: 273261 [Multi-domain] Cd Length: 276 Bit Score: 273.07 E-value: 2.11e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 5 VWLLTDRlIRedypqvQILRALRQRCSEQDVGFRAVFLDQIAVTvvgghLGLQLSQKPlttFPDVVVVRVstpsVQSDSE 84
Cdd:TIGR00768 2 IAILYDR-IR------LDEKMLKEAAEELGIDYKVVTPPAINLT-----FNEGPRALA---ELDVVIVRI----VSMFRG 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 85 ITILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEaepLGYPVVVKSTRGHRGKAV 164
Cdd:TIGR00768 63 LAVLRYLESLGVPVINSSDAILNAGDKFLSHQLLAKAGIPLPRTGLAGSPEEALKLIEE---IGFPVVLKPVFGSWGRGV 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 165 FLARDKHHLSDICHLVRHDVP----YLFQKYVKESHGKDIRVVVVGGQVIGSMLRCsTDGRMQSNCFLGGVGVKCPLTEQ 240
Cdd:TIGR00768 140 SLARDRQAAESLLEHFEQLNGpqnlFLVQEYIKKPGGRDIRVFVVGDEVVAAIYRI-TSGHWRSNLARGGKAEPCSLTEE 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 40254319 241 GKQLAIQVSNILGMDFCGIDLLiMDDGSFTVCEANANVGFLAFDQACNLDVGAIIADYA 299
Cdd:TIGR00768 219 IEELAIKAAKALGLDVAGVDLL-ESEDGLLVNEVNANPEFKNSVKTTGVNIAGKLLDYI 276
|
|
| LysX |
COG0189 |
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport ... |
5-304 |
3.08e-55 |
|
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport and metabolism, Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis, Secondary metabolites biosynthesis, transport and catabolism]; Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 439959 [Multi-domain] Cd Length: 289 Bit Score: 183.22 E-value: 3.08e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 5 VWLLTDRliREDYPQVQILRALRQRcseqdvGFRAVFLDQIAVTVVGGHLGLQLSQKPLTTFpDVVVVRVSTPSVQsdse 84
Cdd:COG0189 4 IAILTDP--PDKDSTKALIEAAQRR------GHEVEVIDPDDLTLDLGRAPELYRGEDLSEF-DAVLPRIDPPFYG---- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 85 ITILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEaepLGYPVVVKSTRGHRGKAV 164
Cdd:COG0189 71 LALLRQLEAAGVPVVNDPEAIRRARDKLFTLQLLARAGIPVPPTLVTRDPDDLRAFLEE---LGGPVVLKPLDGSGGRGV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 165 FLARDKHHLSDICHLVR--HDVPYLFQKYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGK 242
Cdd:COG0189 148 FLVEDEDALESILEALTelGSEPVLVQEFIPEEDGRDIRVLVVGGEPVAAIRRIPAEGEFRTNLARGGRAEPVELTDEER 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 40254319 243 QLAIQVSNILGMDFCGIDlLIMDDGSFTVCEANANVGFLAFDQACNLDVGAIIADYAMSLLP 304
Cdd:COG0189 228 ELALRAAPALGLDFAGVD-LIEDDDGPLVLEVNVTPGFRGLERATGVDIAEAIADYLEARAA 288
|
|
| RimK |
pfam08443 |
RimK-like ATP-grasp domain; This ATP-grasp domain is found in the ribosomal S6 modification ... |
110-298 |
5.53e-33 |
|
RimK-like ATP-grasp domain; This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK.
Pssm-ID: 369879 [Multi-domain] Cd Length: 188 Bit Score: 121.84 E-value: 5.53e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 110 NKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEAEpLGYPVVVKSTRGHRGKAVFLARDKHHLSDICHLVRHDVpyLFQ 189
Cdd:pfam08443 3 DKAKSHQLLAKHGIGPPNTRLAWYPEDAEQFIEQIK-RQFPVIVKSIYGSQGIGVFLAEDEQKLRQTLSATNEQI--LVQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 190 KYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGKQLAIQVSNILGMDFCGIDLLIMDDGsF 269
Cdd:pfam08443 80 EFIAEANNEDIRCLVVGDQVVGALHRQSNEGDFRSNLHRGGVGEKYQLSQEETELAIKAAQAMQLDVAGVDLLRQKRG-L 158
|
170 180
....*....|....*....|....*....
gi 40254319 270 TVCEANANVGFLAFDQACNLDVGAIIADY 298
Cdd:pfam08443 159 LVCEVNSSPGLEGIEKTLGINIAIKIIAS 187
|
|
| PRK10446 |
PRK10446 |
30S ribosomal protein S6--L-glutamate ligase; |
87-291 |
3.46e-20 |
|
30S ribosomal protein S6--L-glutamate ligase;
Pssm-ID: 182468 [Multi-domain] Cd Length: 300 Bit Score: 89.96 E-value: 3.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 87 ILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEAEplGYPVVVKSTRGHRGKAVFL 166
Cdd:PRK10446 76 ALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVG--GAPLVVKLVEGTQGIGVVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 167 ARDKHHLSDICHLVRH-DVPYLFQKYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGKQLA 245
Cdd:PRK10446 154 AETRQAAESVIDAFRGlNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIA 233
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 40254319 246 IQVSNILGMDFCGIDLLIMDDGSFtVCEANANVGFLAFDQACNLDV 291
Cdd:PRK10446 234 IKAARTMALDVAGVDILRANRGPL-VMEVNASPGLEGIEKTTGIDI 278
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| rimK_fam |
TIGR00768 |
alpha-L-glutamate ligase, RimK family; This family, related to bacterial glutathione ... |
5-299 |
2.11e-90 |
|
alpha-L-glutamate ligase, RimK family; This family, related to bacterial glutathione synthetases, contains at least three different alpha-L-glutamate ligases. One is RimK, as in E. coli, which adds additional Glu residues to the native Glu-Glu C-terminus of ribosomal protein S6, but not to Lys-Glu mutants. Most species with a member of this subfamily lack an S6 homolog ending in Glu-Glu, however. Members in Methanococcus jannaschii act instead as a tetrahydromethanopterin:alpha-l-glutamate ligase (MJ0620) and a gamma-F420-2:alpha-l-glutamate ligase (MJ1001).
Pssm-ID: 273261 [Multi-domain] Cd Length: 276 Bit Score: 273.07 E-value: 2.11e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 5 VWLLTDRlIRedypqvQILRALRQRCSEQDVGFRAVFLDQIAVTvvgghLGLQLSQKPlttFPDVVVVRVstpsVQSDSE 84
Cdd:TIGR00768 2 IAILYDR-IR------LDEKMLKEAAEELGIDYKVVTPPAINLT-----FNEGPRALA---ELDVVIVRI----VSMFRG 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 85 ITILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEaepLGYPVVVKSTRGHRGKAV 164
Cdd:TIGR00768 63 LAVLRYLESLGVPVINSSDAILNAGDKFLSHQLLAKAGIPLPRTGLAGSPEEALKLIEE---IGFPVVLKPVFGSWGRGV 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 165 FLARDKHHLSDICHLVRHDVP----YLFQKYVKESHGKDIRVVVVGGQVIGSMLRCsTDGRMQSNCFLGGVGVKCPLTEQ 240
Cdd:TIGR00768 140 SLARDRQAAESLLEHFEQLNGpqnlFLVQEYIKKPGGRDIRVFVVGDEVVAAIYRI-TSGHWRSNLARGGKAEPCSLTEE 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 40254319 241 GKQLAIQVSNILGMDFCGIDLLiMDDGSFTVCEANANVGFLAFDQACNLDVGAIIADYA 299
Cdd:TIGR00768 219 IEELAIKAAKALGLDVAGVDLL-ESEDGLLVNEVNANPEFKNSVKTTGVNIAGKLLDYI 276
|
|
| LysX |
COG0189 |
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport ... |
5-304 |
3.08e-55 |
|
Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily [Amino acid transport and metabolism, Coenzyme transport and metabolism, Translation, ribosomal structure and biogenesis, Secondary metabolites biosynthesis, transport and catabolism]; Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 439959 [Multi-domain] Cd Length: 289 Bit Score: 183.22 E-value: 3.08e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 5 VWLLTDRliREDYPQVQILRALRQRcseqdvGFRAVFLDQIAVTVVGGHLGLQLSQKPLTTFpDVVVVRVSTPSVQsdse 84
Cdd:COG0189 4 IAILTDP--PDKDSTKALIEAAQRR------GHEVEVIDPDDLTLDLGRAPELYRGEDLSEF-DAVLPRIDPPFYG---- 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 85 ITILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEaepLGYPVVVKSTRGHRGKAV 164
Cdd:COG0189 71 LALLRQLEAAGVPVVNDPEAIRRARDKLFTLQLLARAGIPVPPTLVTRDPDDLRAFLEE---LGGPVVLKPLDGSGGRGV 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 165 FLARDKHHLSDICHLVR--HDVPYLFQKYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGK 242
Cdd:COG0189 148 FLVEDEDALESILEALTelGSEPVLVQEFIPEEDGRDIRVLVVGGEPVAAIRRIPAEGEFRTNLARGGRAEPVELTDEER 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 40254319 243 QLAIQVSNILGMDFCGIDlLIMDDGSFTVCEANANVGFLAFDQACNLDVGAIIADYAMSLLP 304
Cdd:COG0189 228 ELALRAAPALGLDFAGVD-LIEDDDGPLVLEVNVTPGFRGLERATGVDIAEAIADYLEARAA 288
|
|
| RimK |
pfam08443 |
RimK-like ATP-grasp domain; This ATP-grasp domain is found in the ribosomal S6 modification ... |
110-298 |
5.53e-33 |
|
RimK-like ATP-grasp domain; This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK.
Pssm-ID: 369879 [Multi-domain] Cd Length: 188 Bit Score: 121.84 E-value: 5.53e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 110 NKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEAEpLGYPVVVKSTRGHRGKAVFLARDKHHLSDICHLVRHDVpyLFQ 189
Cdd:pfam08443 3 DKAKSHQLLAKHGIGPPNTRLAWYPEDAEQFIEQIK-RQFPVIVKSIYGSQGIGVFLAEDEQKLRQTLSATNEQI--LVQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 190 KYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGKQLAIQVSNILGMDFCGIDLLIMDDGsF 269
Cdd:pfam08443 80 EFIAEANNEDIRCLVVGDQVVGALHRQSNEGDFRSNLHRGGVGEKYQLSQEETELAIKAAQAMQLDVAGVDLLRQKRG-L 158
|
170 180
....*....|....*....|....*....
gi 40254319 270 TVCEANANVGFLAFDQACNLDVGAIIADY 298
Cdd:pfam08443 159 LVCEVNSSPGLEGIEKTLGINIAIKIIAS 187
|
|
| PRK10446 |
PRK10446 |
30S ribosomal protein S6--L-glutamate ligase; |
87-291 |
3.46e-20 |
|
30S ribosomal protein S6--L-glutamate ligase;
Pssm-ID: 182468 [Multi-domain] Cd Length: 300 Bit Score: 89.96 E-value: 3.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 87 ILRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEAEplGYPVVVKSTRGHRGKAVFL 166
Cdd:PRK10446 76 ALRQFEMLGSYPLNESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVG--GAPLVVKLVEGTQGIGVVL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 167 ARDKHHLSDICHLVRH-DVPYLFQKYVKESHGKDIRVVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGKQLA 245
Cdd:PRK10446 154 AETRQAAESVIDAFRGlNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGGAASVASITPQEREIA 233
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 40254319 246 IQVSNILGMDFCGIDLLIMDDGSFtVCEANANVGFLAFDQACNLDV 291
Cdd:PRK10446 234 IKAARTMALDVAGVDILRANRGPL-VMEVNASPGLEGIEKTTGIDI 278
|
|
| PRK12767 |
PRK12767 |
carbamoyl phosphate synthase-like protein; Provisional |
81-194 |
8.96e-14 |
|
carbamoyl phosphate synthase-like protein; Provisional
Pssm-ID: 237195 [Multi-domain] Cd Length: 326 Bit Score: 71.45 E-value: 8.96e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 81 SDSEITIL-RH---LEKLGCR-LVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFSKMIDEAEpLGYPVVVKS 155
Cdd:PRK12767 77 IDPELPLLaQNrdrFEEIGVKvLVSSKEVIEICNDKWLTYEFLKENGIPTPKSYLPESLEDFKAALAKGE-LQFPLFVKP 155
|
90 100 110
....*....|....*....|....*....|....*....
gi 40254319 156 TRGHRGKAVFLARDKhhlSDICHLVRHDVPYLFQKYVKE 194
Cdd:PRK12767 156 RDGSASIGVFKVNDK---EELEFLLEYVPNLIIQEFIEG 191
|
|
| AccC |
COG0439 |
Biotin carboxylase [Lipid transport and metabolism]; Biotin carboxylase is part of the Pathway ... |
92-279 |
4.08e-10 |
|
Biotin carboxylase [Lipid transport and metabolism]; Biotin carboxylase is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 440208 [Multi-domain] Cd Length: 263 Bit Score: 59.89 E-value: 4.08e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 92 EKLGCRlVNRPQSILNCINKFWTFQELAGHGVPMPDTFSYGGHEDFskmIDEAEPLGYPVVVKSTRGHRGKAVFLARDK- 170
Cdd:COG0439 37 EELGLP-GPSPEAIRAMRDKVLMREALAAAGVPVPGFALVDSPEEA---LAFAEEIGYPVVVKPADGAGSRGVRVVRDEe 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 171 ---HHLSDIC---HLVRHDVPYLFQKYVKE---------SHGKDIrvvvvggqvigsmlRCSTDGRMQSNCFLGGVG--- 232
Cdd:COG0439 113 eleAALAEARaeaKAGSPNGEVLVEEFLEGreysveglvRDGEVV--------------VCSITRKHQKPPYFVELGhea 178
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 40254319 233 ---VKCPLTEQGKQLAIQVSNILGMDFCG--IDLLIMDDGSFTVCEANANVG 279
Cdd:COG0439 179 pspLPEELRAEIGELVARALRALGYRRGAfhTEFLLTPDGEPYLIEINARLG 230
|
|
| COG3919 |
COG3919 |
Predicted ATP-dependent carboligase, ATP-grasp superfamily [General function prediction only]; |
110-192 |
6.70e-06 |
|
Predicted ATP-dependent carboligase, ATP-grasp superfamily [General function prediction only];
Pssm-ID: 443124 [Multi-domain] Cd Length: 382 Bit Score: 47.62 E-value: 6.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 110 NKfWTFQELAG-HGVPMPDTFSYGGHEDFSKMideAEPLGYPVVVKSTRGHR--------GKAVFLARDKHHLSDICH-L 179
Cdd:COG3919 117 DK-ERFYELAEeLGVPVPKTVVLDSADDLDAL---AEDLGFPVVVKPADSVGydelsfpgKKKVFYVDDREELLALLRrI 192
|
90
....*....|...
gi 40254319 180 VRHDVPYLFQKYV 192
Cdd:COG3919 193 AAAGYELIVQEYI 205
|
|
| ATP-grasp_3 |
pfam02655 |
ATP-grasp domain; No functional information or experimental verification of function is known ... |
108-267 |
3.88e-05 |
|
ATP-grasp domain; No functional information or experimental verification of function is known in this family. This family appears to be an ATP-grasp domain (Pers. obs. A Bateman).
Pssm-ID: 396979 [Multi-domain] Cd Length: 160 Bit Score: 43.53 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 108 CINKFWTFQELAGHGVPMPDTFSygghedfskmIDEAEPLGYPVVVKSTRGHRGKAVFLARDKHHLSDICHlvrhdvPYL 187
Cdd:pfam02655 1 ASDKLKTYKALKNAGVPTPETLQ----------AEELLREEKKYVVKPRDGCGGEGVRKVENGREDEAFIE------NVL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 188 FQKYVKESH--------GKDIRvvvvggqvIGSMLRCSTDGRMQSNCFLGGVgVKCPLTEQGK--QLAIQV----SNILG 253
Cdd:pfam02655 65 VQEFIEGEPlsvsllsdGEKAL--------PLSVNRQYIDNGGSGFVYAGNV-TPSRTELKEEiiELAEEVveclPGLRG 135
|
170
....*....|....
gi 40254319 254 MDfcGIDLLIMDDG 267
Cdd:pfam02655 136 YV--GVDLVLKDNE 147
|
|
| PRK12458 |
PRK12458 |
glutathione synthetase; Provisional |
62-260 |
1.01e-04 |
|
glutathione synthetase; Provisional
Pssm-ID: 183536 [Multi-domain] Cd Length: 338 Bit Score: 43.86 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 62 PLTTFpDVVVVRvSTPSVQSDS-------EITILRHLEKLGCRLVNRPQSILNCINKFWtFQElaghgvpMPDTFSYGGH 134
Cdd:PRK12458 76 PLAGF-DVIFLR-ANPPLDPLArnwadsvGIAFGRLAARDGVLVVNDPDGLRIANNKLY-FQS-------FPEEVRPTTH 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 135 edFSKMIDE-----AEPLGYPVVVKSTRGHRGKAVFLARdKHHLSDICHLVRH--DVPYLF-QKYVKESHGKDIR----- 201
Cdd:PRK12458 146 --ISRNKEYireflEESPGDKMILKPLQGSGGQGVFLIE-KSAQSNLNQILEFysGDGYVIaQEYLPGAEEGDVRillln 222
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 40254319 202 -VVVVGGQVIGSMLRCSTDGRMQSNCFLGGVGVKCPLTEQGKQLAIQVSNIL---GMDFCGID 260
Cdd:PRK12458 223 gEPLERDGHYAAMRRVPAGGDVRSNVHAGGSVVKHTLTKEELELCEAIRPKLvrdGLFFVGLD 285
|
|
| PRK05246 |
PRK05246 |
glutathione synthetase; Provisional |
62-298 |
4.45e-04 |
|
glutathione synthetase; Provisional
Pssm-ID: 235371 [Multi-domain] Cd Length: 316 Bit Score: 41.62 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 62 PLTTFpDVVVVRVSTPSvqsDSE-IT---ILRHLEKLGCRLVNRPQSILNCINKFWT--FQELaghgvpMPDT------- 128
Cdd:PRK05246 76 PLADF-DVILMRKDPPF---DMEyIYatyLLERAERPGTLVVNKPQSLRDANEKLFTlwFPEL------MPPTlvtrdka 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 129 ----FsYGGHEDfskmideaeplgypVVVKSTRGHRGKAVF-LARDKHHLSDICHLVRHD--VPYLFQKYVKE-SHGkDI 200
Cdd:PRK05246 146 eiraF-RAEHGD--------------IILKPLDGMGGAGIFrVKADDPNLGSILETLTEHgrEPVMAQRYLPEiKEG-DK 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 201 RVVvvggqvigsML----------RCSTDGRMQSNCFLGGVGVKCPLTEQGKQLAIQVSNIL---GMDFCGIDLLimdDG 267
Cdd:PRK05246 210 RIL---------LVdgepvgyalaRIPAGGETRGNLAAGGRGEATPLTERDREICAAIGPELkerGLIFVGIDVI---GD 277
|
250 260 270
....*....|....*....|....*....|....*
gi 40254319 268 SFTvcEanANV----GFLAFDQACNLDVGAIIADY 298
Cdd:PRK05246 278 YLT--E--INVtsptGIREIERLTGVDIAGMLWDA 308
|
|
| PLN02948 |
PLN02948 |
phosphoribosylaminoimidazole carboxylase |
88-175 |
6.20e-04 |
|
phosphoribosylaminoimidazole carboxylase
Pssm-ID: 178534 [Multi-domain] Cd Length: 577 Bit Score: 41.58 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 40254319 88 LRHLEKLGCRLVNRPQSILNCINKFWTFQELAGHGVPMPDtfsYGGHEDFSKMIDEAEPLGYPVVVKSTRGH---RGKAV 164
Cdd:PLN02948 99 LEALEKQGVDVQPKSSTIRIIQDKYAQKVHFSKHGIPLPE---FMEIDDLESAEKAGDLFGYPLMLKSRRLAydgRGNAV 175
|
90
....*....|.
gi 40254319 165 flARDKHHLSD 175
Cdd:PLN02948 176 --AKTEEDLSS 184
|
|
| ATP-grasp |
pfam02222 |
ATP-grasp domain; This family does not contain all known ATP-grasp domain members. This family ... |
121-175 |
2.71e-03 |
|
ATP-grasp domain; This family does not contain all known ATP-grasp domain members. This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.
Pssm-ID: 396689 [Multi-domain] Cd Length: 169 Bit Score: 38.39 E-value: 2.71e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 40254319 121 HGVPMPDtfsYGGHEDFSKMIDEAEPLGYPVVVKSTR-GHRGKAVFLARDKHHLSD 175
Cdd:pfam02222 3 LGLPTPR---FMAAESLEELIEAGQELGYPCVVKARRgGYDGKGQYVVRSEADLPQ 55
|
|
| DdlA |
COG1181 |
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, ... |
108-170 |
3.30e-03 |
|
D-alanine-D-alanine ligase or related ATP-grasp enzyme [Cell wall/membrane/envelope biogenesis, General function prediction only]; D-alanine-D-alanine ligase or related ATP-grasp enzyme is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440794 [Multi-domain] Cd Length: 303 Bit Score: 38.93 E-value: 3.30e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 40254319 108 CINKFWTFQELAGHGVPMPD--TFSYGGHEDFSKMIDEaepLGYPVVVKSTRGHRGKAVFLARDK 170
Cdd:COG1181 93 AMDKALTKRVLAAAGLPTPPyvVLRRGELADLEAIEEE---LGLPLFVKPAREGSSVGVSKVKNA 154
|
|
| PRK14016 |
PRK14016 |
cyanophycin synthetase; Provisional |
110-166 |
7.17e-03 |
|
cyanophycin synthetase; Provisional
Pssm-ID: 237586 [Multi-domain] Cd Length: 727 Bit Score: 38.60 E-value: 7.17e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 40254319 110 NKFWTFQELAGHGVPMPDtfsygGH--EDFSKMIDEAEPLGYPVVVKSTRGHRGKAVFL 166
Cdd:PRK14016 214 DKELTKRLLAAAGVPVPE-----GRvvTSAEDAWEAAEEIGYPVVVKPLDGNHGRGVTV 267
|
|
|