|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
6-467 |
0e+00 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 727.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 6 KHVVIIGGGITGLAAAFYMEKeikeKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEH 85
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHK----KGPDADITLLEASDRLGGKIQTVRKDGFPIELGPESFLARKPSAPALVKELGLED 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 86 LLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEVV 165
Cdd:PRK11883 77 ELVANTTGQSYIYVNGKLHPIPPGTVMGIPTSIAPFLFAGLVSPIGKLRAAADLRPPRWKPGQDQSVGAFFRRRFGDEVV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 166 ENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGsgqqlTAKKQGQFQTLSTGLQTLVEEIEKQL 245
Cdd:PRK11883 157 ENLIEPLLSGIYAGDIDTLSLRATFPQLAQAEDKYGSLLRGMRKALPKE-----KKKTKGVFGTLKGGLQSLIEALEEKL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 246 KLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSvQM 325
Cdd:PRK11883 232 PAGTIHKGTPVTKIDKSGDGYEIVLSNGGEIEADAVIVAVPHPVLPSLFVAPPAFALFKTIPSTSVATVALAFPESA-TN 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 326 EHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTC 405
Cdd:PRK11883 311 LPDGTGFLVARNSDYTITACTWTSKKWPHTTPEGKVLLRLYVGRPGDEAVVDATDEELVAFVLADLSKVMGITGDPEFTI 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 406 VTRWHESMPQYHVGHKQRIKELREALAsAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTY 467
Cdd:PRK11883 391 VQRWKEAMPQYGVGHIERVAELRAGLP-HYPGLYVAGASFEGVGLPDCIAQAKRAAARLLAE 451
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
4-470 |
0e+00 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 717.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 4 GKKHVVIIGGGITGLAAAFYMEKEIKEknLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGL 83
Cdd:TIGR00562 1 GKKHVVIIGGGISGLCAAYYLEKEIPE--LPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLERKKSAPDLVKDLGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 84 EHLLVNNATGQSYVLVNRtlhpmpkGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDdQSLGEFFRRRVGDE 163
Cdd:TIGR00562 79 EHVLVSDATGQRYVLVNR-------GKLMPVPTKIAPFVKTGLFSLGGKLRAGMDFIRPASPGKD-ESVEEFVRRRFGDE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 164 VVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTR--PQGSGQQLTAKKQGQ-FQTLSTGLQTLVEE 240
Cdd:TIGR00562 151 VVENLIEPLLSGIYAGDPSKLSLKSTFPKFYQTEQKHGSLILGMKKTRnlPQGSGLQLTAKKQGQdFQTLATGLETLPEE 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 241 IEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL--PAISHLKNMHSTSVANVALGF 318
Cdd:TIGR00562 231 IEKRLKLTKVYKGTKVTKLSHRGSNYTLELDNGVTVETDSVVVTAPHKAAAGLLSELsnSASSHLDKIHSPPVANVNLGF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 319 PEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN 398
Cdd:TIGR00562 311 PEGSVDGELEGFGFLISRSSKFAILGCIFTSKLFPNRAPPGKTLLTAYIGGATDESIVDLSENEIINIVLRDLKKVLNIN 390
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 399 GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYLFS 470
Cdd:TIGR00562 391 NEPEMLCVTRWHRAIPQYHVGHDQRLKEARELLESAYPGVFLTGNSFEGVGIPDCIDQGKAAASDVLTFLFS 462
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
5-468 |
0e+00 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 532.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 5 KKHVVIIGGGITGLAAAFYMEKeikeknLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAK------AGHEVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFLTRDPEVLELLRELGLG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 85 HLLVNNATGQSYVLVNRTLHPMPKGAvmgiptkiAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEV 164
Cdd:COG1232 75 DELVWPNTRKSYIYYGGKLHPLPQGP--------LALLRSPLLSLAGKLRALLELLAPRRPPGEDESLAEFVRRRFGREV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 165 VENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGsgqqltaKKQGQFQTLSTGLQTLVEEIEKQ 244
Cdd:COG1232 147 YERLVEPLLEGVYAGDPDELSADWAFPRLKRLELEHGSLIKGALALRKGA-------KAGEVFGYLRGGLGTLVEALAEA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 245 LKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP--AISHLKNMHSTSVANVALGFPEGS 322
Cdd:COG1232 220 LEAGEIRLGTRVTAIEREGGGWRVTTSDGETIEADAVVSATPAPALARLLAPLPpeVAAALAGIPYASVAVVALGFDRPD 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 323 VQmEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPE 402
Cdd:COG1232 300 LP-PPDGFGWLVPRDEGVPILAVTFSSNKWPHRAPDGKVLLRLEVGGAGDPELWQLSDEELVALALADLRKLLGIDAEPV 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 417115 403 MTCVTRWHESMPQYHVGHKQRIKELREALAsAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYL 468
Cdd:COG1232 379 DTRVVRWPKAYPQYTVGHLERVAAIREALA-ALPGLYLAGRAYDGVGLPDCIRSGREAAERILAEL 443
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
15-465 |
2.57e-67 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 222.37 E-value: 2.57e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 15 ITGLAAAfymeKEIKEKNLplELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQ 94
Cdd:pfam01593 1 LAGLAAA----RELLRAGH--DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQPPLLALLKELGLEDRLVLPDPAP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 95 SYVLVNRTLHPMPkGAVMGIPTKIAPFVSTG-LFSLSGKARAAMDFILPA-------SKTKDDQSLGEFFRRRVGD-EVV 165
Cdd:pfam01593 75 FYTVLFAGGRRYP-GDFRRVPAGWEGLLEFGrLLSIPEKLRLGLAALASDaldefdlDDFSLAESLLFLGRRGPGDvEVW 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 166 ENLIE-------PLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGmkktrpqgsgqqltakkqgqfqtlSTGLQTLV 238
Cdd:pfam01593 154 DRLIDpelfaalPFASGAFAGDPSELSAGLALPLLWALLGEGGSLLLP------------------------RGGLGALP 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 239 EEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AISHLKNMHSTSVANV 314
Cdd:pfam01593 210 DALAAQLLGGDVRLNTRVRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLKRILFTPPlppeKARAIRNLGYGPVNKV 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 315 ALGFPEgsVQMEHEGTGFVISRNSDFAITACTWTNkkWPHAAPEGK-TLLRAYVGKAG-DESIVDLSDNDIINIVLEDLK 392
Cdd:pfam01593 290 HLEFDR--KFWPDLGLLGLLSELLTGLGTAFSWLT--FPNRAPPGKgLLLLVYVGPGDrARELEGLSDEELLQAVLRDLR 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 393 KVMNING-EPEMTCVTRWHE--------SMPQYHVGHKQRIKELRealaSAYPGVYMTGAS----FEGvGIPDCIDQGKA 459
Cdd:pfam01593 366 KLFGEEApEPLRVLVSDWHTdpwprgsySLPQYGPGHDDYRPLAR----TPDPGLFFAGEHtstgYPG-TVEGAIESGRR 440
|
....*.
gi 417115 460 AVSDAL 465
Cdd:pfam01593 441 AARAVL 446
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
6-467 |
0e+00 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 727.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 6 KHVVIIGGGITGLAAAFYMEKeikeKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEH 85
Cdd:PRK11883 1 KKVAIIGGGITGLSAAYRLHK----KGPDADITLLEASDRLGGKIQTVRKDGFPIELGPESFLARKPSAPALVKELGLED 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 86 LLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEVV 165
Cdd:PRK11883 77 ELVANTTGQSYIYVNGKLHPIPPGTVMGIPTSIAPFLFAGLVSPIGKLRAAADLRPPRWKPGQDQSVGAFFRRRFGDEVV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 166 ENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGsgqqlTAKKQGQFQTLSTGLQTLVEEIEKQL 245
Cdd:PRK11883 157 ENLIEPLLSGIYAGDIDTLSLRATFPQLAQAEDKYGSLLRGMRKALPKE-----KKKTKGVFGTLKGGLQSLIEALEEKL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 246 KLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSvQM 325
Cdd:PRK11883 232 PAGTIHKGTPVTKIDKSGDGYEIVLSNGGEIEADAVIVAVPHPVLPSLFVAPPAFALFKTIPSTSVATVALAFPESA-TN 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 326 EHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTC 405
Cdd:PRK11883 311 LPDGTGFLVARNSDYTITACTWTSKKWPHTTPEGKVLLRLYVGRPGDEAVVDATDEELVAFVLADLSKVMGITGDPEFTI 390
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 406 VTRWHESMPQYHVGHKQRIKELREALAsAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTY 467
Cdd:PRK11883 391 VQRWKEAMPQYGVGHIERVAELRAGLP-HYPGLYVAGASFEGVGLPDCIAQAKRAAARLLAE 451
|
|
| proto_IX_ox |
TIGR00562 |
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a ... |
4-470 |
0e+00 |
|
protoporphyrinogen oxidase; This enzyme oxidizes protoporphyrinogen IX to protoporphyrin IX, a precursor of heme and chlorophyll. Bacillus subtilis HemY also has coproporphyrinogen III to coproporphyrin III oxidase activity in a heterologous expression system, although the role for this activity in vivo is unclear. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Pssm-ID: 213540 [Multi-domain] Cd Length: 462 Bit Score: 717.39 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 4 GKKHVVIIGGGITGLAAAFYMEKEIKEknLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGL 83
Cdd:TIGR00562 1 GKKHVVIIGGGISGLCAAYYLEKEIPE--LPVELTLVEASDRVGGKIQTVKEDGYLIERGPDSFLERKKSAPDLVKDLGL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 84 EHLLVNNATGQSYVLVNRtlhpmpkGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDdQSLGEFFRRRVGDE 163
Cdd:TIGR00562 79 EHVLVSDATGQRYVLVNR-------GKLMPVPTKIAPFVKTGLFSLGGKLRAGMDFIRPASPGKD-ESVEEFVRRRFGDE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 164 VVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTR--PQGSGQQLTAKKQGQ-FQTLSTGLQTLVEE 240
Cdd:TIGR00562 151 VVENLIEPLLSGIYAGDPSKLSLKSTFPKFYQTEQKHGSLILGMKKTRnlPQGSGLQLTAKKQGQdFQTLATGLETLPEE 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 241 IEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL--PAISHLKNMHSTSVANVALGF 318
Cdd:TIGR00562 231 IEKRLKLTKVYKGTKVTKLSHRGSNYTLELDNGVTVETDSVVVTAPHKAAAGLLSELsnSASSHLDKIHSPPVANVNLGF 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 319 PEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN 398
Cdd:TIGR00562 311 PEGSVDGELEGFGFLISRSSKFAILGCIFTSKLFPNRAPPGKTLLTAYIGGATDESIVDLSENEIINIVLRDLKKVLNIN 390
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 399 GEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYLFS 470
Cdd:TIGR00562 391 NEPEMLCVTRWHRAIPQYHVGHDQRLKEARELLESAYPGVFLTGNSFEGVGIPDCIDQGKAAASDVLTFLFS 462
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
5-468 |
0e+00 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 532.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 5 KKHVVIIGGGITGLAAAFYMEKeikeknLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAK------AGHEVTVLEASDRVGGLIRTVEVDGFRIDRGPHSFLTRDPEVLELLRELGLG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 85 HLLVNNATGQSYVLVNRTLHPMPKGAvmgiptkiAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEV 164
Cdd:COG1232 75 DELVWPNTRKSYIYYGGKLHPLPQGP--------LALLRSPLLSLAGKLRALLELLAPRRPPGEDESLAEFVRRRFGREV 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 165 VENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGsgqqltaKKQGQFQTLSTGLQTLVEEIEKQ 244
Cdd:COG1232 147 YERLVEPLLEGVYAGDPDELSADWAFPRLKRLELEHGSLIKGALALRKGA-------KAGEVFGYLRGGLGTLVEALAEA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 245 LKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP--AISHLKNMHSTSVANVALGFPEGS 322
Cdd:COG1232 220 LEAGEIRLGTRVTAIEREGGGWRVTTSDGETIEADAVVSATPAPALARLLAPLPpeVAAALAGIPYASVAVVALGFDRPD 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 323 VQmEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPE 402
Cdd:COG1232 300 LP-PPDGFGWLVPRDEGVPILAVTFSSNKWPHRAPDGKVLLRLEVGGAGDPELWQLSDEELVALALADLRKLLGIDAEPV 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 417115 403 MTCVTRWHESMPQYHVGHKQRIKELREALAsAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYL 468
Cdd:COG1232 379 DTRVVRWPKAYPQYTVGHLERVAAIREALA-ALPGLYLAGRAYDGVGLPDCIRSGREAAERILAEL 443
|
|
| PRK12416 |
PRK12416 |
protoporphyrinogen oxidase; Provisional |
6-458 |
1.35e-125 |
|
protoporphyrinogen oxidase; Provisional
Pssm-ID: 183516 Cd Length: 463 Bit Score: 373.01 E-value: 1.35e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEH 85
Cdd:PRK12416 2 KTVVVIGGGITGLSTMFYLEKLKKDYNIDLNLILVEKEEYLGGKIHSVEEKDFIMESGADSIVARNEHVMPLVKDLNLEE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 86 LLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEVV 165
Cdd:PRK12416 82 EMVYNETGISYIYSDNTLHPIPSDTIFGIPMSVESLFSSTLVSTKGKIVALKDFITKNKEFTKDTSLALFLESFLGKELV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 166 ENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMK--KTRPQGSGQQltakkqgQFQTLSTGLQTLVEEIEK 243
Cdd:PRK12416 162 ERQIAPVLSGVYSGKLNELTMASTLPYLLDYKNKYGSIIKGFEenKKQFQSAGNK-------KFVSFKGGLSTIIDRLEE 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 244 QLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSV 323
Cdd:PRK12416 235 VLTETVVKKGAVTTAVSKQGDRYEISFANHESIQADYVVLAAPHDIAETLLQSNELNEQFHTFKNSSLISIYLGFDILDE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 324 QMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGD--ESIVDLSDNDIINIVLEDLKKVMNINGEP 401
Cdd:PRK12416 315 QLPADGTGFIVTENSDLHCDACTWTSRKWKHTSGKQKLLVRMFYKSTNPvyETIKNYSEEELVRVALYDIEKSLGIKGEP 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 417115 402 EMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGK 458
Cdd:PRK12416 395 EVVEVTNWKDLMPKYHLEHNQAVQSLQEKMMNLYPNIYLAGASYYGVGIGACIGNGK 451
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
6-468 |
2.19e-77 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 249.93 E-value: 2.19e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 6 KHVVIIGGGITGLAAAFYMEKeikekNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVkDLGL-E 84
Cdd:PLN02576 13 KDVAVVGAGVSGLAAAYALAS-----KHGVNVLVTEARDRVGGNITSVSEDGFIWEEGPNSFQPSDPELTSAV-DSGLrD 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 85 HLLVNNATGQSYVLVNRTLHPmpkgavmgIPTKIAPFVSTGLFSLSGKARAAMDFIL--PASKTKDDQSLGEFFRRRVGD 162
Cdd:PLN02576 87 DLVFPDPQAPRYVVWNGKLRP--------LPSNPIDLPTFDLLSAPGKIRAGLGAFGwkRPPPPGREESVGEFVRRHLGD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 163 EVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGM----------KKTRPQGSGqqLTAKKQGQFQTLST 232
Cdd:PLN02576 159 EVFERLIDPFVSGVYAGDPSSLSMKAAFPKLWNLEKRGGSIIGGAikaiqeakknPKPEPRDPR--LPKPKGQTVGSFRG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 233 GLQTLVEEIEKQLKLTKVYKGTKVTKLSHS-GSCYSLELD--NG-VTLDADSVIVTAPHKAAAGMLSEL--PAISHLKNM 306
Cdd:PLN02576 237 GLQTLPDALAKRLGKDKVKLNWKVLSLSKNdDGGYSLTYDtpEGkVNVTAKAVVMTAPLYVVSEMLRPKspAAADALPEF 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 307 HSTSVANVALGFPEGSVQMEH------EGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSD 380
Cdd:PLN02576 317 YYPPVAAVTTSYPKEAVKRERlidgplEGFGQLHPRKQGVKTLGTIYSSSLFPDRAPEGRVLLLNYIGGSRNTGIASASE 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 381 NDIINIVLEDLKKVMNINGEPEMTCVTR--WHESMPQYHVGHKQRIKELREALASA-YPGVYMTGASFEGVGIPDCIDQG 457
Cdd:PLN02576 397 EELVEAVDRDLRKLLLKPGAPPPKVVGVrvWPKAIPQYLLGHLDVLEAAEKMEKDLgLPGLFLGGNYRGGVALGKCVESG 476
|
490
....*....|.
gi 417115 458 KAAVSDALTYL 468
Cdd:PLN02576 477 YEAADLVISYL 487
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
15-465 |
2.57e-67 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 222.37 E-value: 2.57e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 15 ITGLAAAfymeKEIKEKNLplELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQ 94
Cdd:pfam01593 1 LAGLAAA----RELLRAGH--DVTVLEARDRVGGRIRTVRDDGFLIELGAMWFHGAQPPLLALLKELGLEDRLVLPDPAP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 95 SYVLVNRTLHPMPkGAVMGIPTKIAPFVSTG-LFSLSGKARAAMDFILPA-------SKTKDDQSLGEFFRRRVGD-EVV 165
Cdd:pfam01593 75 FYTVLFAGGRRYP-GDFRRVPAGWEGLLEFGrLLSIPEKLRLGLAALASDaldefdlDDFSLAESLLFLGRRGPGDvEVW 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 166 ENLIE-------PLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGmkktrpqgsgqqltakkqgqfqtlSTGLQTLV 238
Cdd:pfam01593 154 DRLIDpelfaalPFASGAFAGDPSELSAGLALPLLWALLGEGGSLLLP------------------------RGGLGALP 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 239 EEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELP----AISHLKNMHSTSVANV 314
Cdd:pfam01593 210 DALAAQLLGGDVRLNTRVRSIDREGDGVTVTLTDGEVIEADAVIVTVPLGVLKRILFTPPlppeKARAIRNLGYGPVNKV 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 315 ALGFPEgsVQMEHEGTGFVISRNSDFAITACTWTNkkWPHAAPEGK-TLLRAYVGKAG-DESIVDLSDNDIINIVLEDLK 392
Cdd:pfam01593 290 HLEFDR--KFWPDLGLLGLLSELLTGLGTAFSWLT--FPNRAPPGKgLLLLVYVGPGDrARELEGLSDEELLQAVLRDLR 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 393 KVMNING-EPEMTCVTRWHE--------SMPQYHVGHKQRIKELRealaSAYPGVYMTGAS----FEGvGIPDCIDQGKA 459
Cdd:pfam01593 366 KLFGEEApEPLRVLVSDWHTdpwprgsySLPQYGPGHDDYRPLAR----TPDPGLFFAGEHtstgYPG-TVEGAIESGRR 440
|
....*.
gi 417115 460 AVSDAL 465
Cdd:pfam01593 441 AARAVL 446
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
5-443 |
1.56e-29 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 120.03 E-value: 1.56e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 5 KKHVVIIGGGITGLAAAFymekEIKEKNlpLELTLVEASPRVGGKIQTVKKD--GYIIERGP-------DSFLErkksap 75
Cdd:COG1231 7 GKDVVIVGAGLAGLAAAR----ELRKAG--LDVTVLEARDRVGGRVWTLRFGddGLYAELGAmrippshTNLLA------ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 76 qLVKDLGLEHLLVNNATGQSYVLVNRTLHPmpkgavMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEF 155
Cdd:COG1231 75 -LARELGLPLEPFPNENGNALLYLGGKRVR------AGEIAADLRGVAELLAKLLRALAAALDPWAHPAAELDRESLAEW 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 156 FRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQkhrslilGMKKTRPQGsgqqltakkqgqfqtlstGLQ 235
Cdd:COG1231 148 LRRNGASPSARRLLGLLGAGEYGADPDELSLLDLLRYAASAGG-------GAQQFRIVG------------------GMD 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 236 TLVEEIEKQLKlTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGM--LSELP-----AISHLKNMHS 308
Cdd:COG1231 203 QLPRALAAELG-DRIRLGAPVTRIRQDGDGVTVTTDDGGTVRADAVIVTVPPSVLRRIefDPPLPaakraAIQRLPYGAA 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 309 TsvaNVALGFPE------GSVQmeheGTGFvisrnSDFAITACTWTnkkwPHAAPEGKTLLRAYVGkaGDES--IVDLSD 380
Cdd:COG1231 282 I---KVFLQFDRpfweedGLYG----GISL-----TDLPIRQTWYP----SNGPDGGAGVLLGYVG--GDDAraLAALSP 343
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 381 NDIINIVLEDLKKVM-NINGEPEMTCVTRWHE------SMPQYHVGHKQRI-KELR----------EALASAYPGvYMTG 442
Cdd:COG1231 344 EERVAAALEQLARIFgVYAAEPVDYVSTDWGRdpwsrgAYAAAPPGQLTAAgPALAepdgrihfagEHTSDEWPG-WVEG 422
|
.
gi 417115 443 A 443
Cdd:COG1231 423 A 423
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
7-446 |
2.33e-26 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 110.75 E-value: 2.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 7 HVVIIGGGITGLAAAFYMEKEIKeknlplELTLVEASPRVGGKIQTVKKDGYIIER------GPDSFLerkksaPQLVKD 80
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGH------EVTVFEADDQLGGLAASFEFGGLPIERfyhhifKSDEAL------LELLDE 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 81 LGLEHLLVNNATGQSYVlVNRTLHPmpkgavMGIPTKIAPFvsTGLfSLSGKARAAMdFILPASKTKDDQSL-----GEF 155
Cdd:PRK07233 69 LGLEDKLRWRETKTGYY-VDGKLYP------LGTPLELLRF--PHL-SLIDKFRLGL-LTLLARRIKDWRALdkvpaEEW 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 156 FRRRVGDEVVENLIEPLLSGIYAGDIDKLS---LMSTFpqfyqteqKHRSlilgmkKTRPQGSGQQLTAKKQGqFQTLst 232
Cdd:PRK07233 138 LRRWSGEGVYEVFWEPLLESKFGDYADDVSaawLWSRI--------KRRG------NRRYSLFGEKLGYLEGG-FATL-- 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 233 gLQTLVEEIEKqlKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISH--LKNMHSTS 310
Cdd:PRK07233 201 -IDALAEAIEA--RGGEIRLGTPVTSVVIDGGGVTGVEVDGEEEDFDAVISTAPPPILARLVPDLPADVLarLRRIDYQG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 311 VANVAL-----------------GFPEGSVqMEHegTGFVisrnsdfaitactwtnkkwPHAAPEGKTLLraYVGK--AG 371
Cdd:PRK07233 278 VVCMVLklrrpltdyywlnindpGAPFGGV-IEH--TNLV-------------------PPERYGGEHLV--YLPKylPG 333
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 417115 372 DESIVDLSDNDIINIVLEDLKKvMNINGEPEMTCVTRWHESM---PQYHVGHKQRIKELREALasayPGVYMTGASFE 446
Cdd:PRK07233 334 DHPLWQMSDEELLDRFLSYLRK-MFPDFDRDDVRAVRISRAPyaqPIYEPGYLDKIPPYDTPI----EGLYLAGMSQI 406
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
6-439 |
7.04e-19 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 88.76 E-value: 7.04e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 6 KHVVIIGGGITGLAAAfymekeikeknlpLEL-------TLVEASPRVGGKIQTVK--KDGYIIERGPD----------S 66
Cdd:COG3349 4 PRVVVVGGGLAGLAAA-------------VELaeagfrvTLLEARPRLGGRARSFPdpDTGLPIDNGQHvllgcyrntlD 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 67 FLERKKSAPQLVkdlGLEHLLVNNATGQSYVLVNRTLhPMPKGAVMGIPTkiAPFVSTG-LFSLsgkARAAMDFILPASK 145
Cdd:COG3349 71 LLRRIGAADNLV---GPEPLQFPLPGGRRWTLRAPRL-PAPLHLLRALLR--APGLSLAdRLAL---LRLLTACRERRWR 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 146 TKDDQSLGEFFRR-RVGDEVVENLIEPLLSGIYAGDIDKLSLmSTFPQFYqteqkhRSLILGmkktRPQGSgqqltakkq 224
Cdd:COG3349 142 ELDDISVADWLRRhGQSPRLIRRLWEPLLLAALNTPPEQASA-RLALTVL------RETLLA----GPAAS--------- 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 225 gQFQTLSTGL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSGS-CYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAI 300
Cdd:COG3349 202 -DLLVPRGPLsELFVDPALAYLEArgGEVRLGTRVRALEFDGGrVTGLVLADGETVPADAVVLAVPPEVAARLLPELARL 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 301 SHLKNMH---STSVANVALGFPEgSVQMEHEG-TGFVisrnsdfaiTACT-WTNKKwPHAAPEGKTLLRAYVGKAGDEsi 375
Cdd:COG3349 281 PELGLLApleYSPIVNVHLWLDR-PVTLGPPPfAGLV---------GSTSqWVFDR-GAGDGGQGGVLSVVISAADRL-- 347
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 417115 376 VDLSDNDIINIVLEDLKKVMNINGEPEMtcvtRWHesmpqyhvghkQRIKElREALASAYPGVY 439
Cdd:COG3349 348 LDLSREELAAEVWAELAALLPAAREALP----VWS-----------RVVRE-KRATFAATPGSD 395
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
5-296 |
1.04e-10 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 63.72 E-value: 1.04e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 5 KKHVVIIGGGITGLAAAFYMEKEikeknlPLELTLVEASPRVGGKIQTVKKDGYIIERGPdSFLERKKSAPQLVKDLGLE 84
Cdd:COG1233 3 MYDVVVIGAGIGGLAAAALLARA------GYRVTVLEKNDTPGGRARTFERPGFRFDVGP-SVLTMPGVLERLFRELGLE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 85 HLLvnnatgqSYVLVNRTL-HPMPKGAVMGIPTKIAPFVSTgLFSLSG---------------KARAAMDFIL--PASKT 146
Cdd:COG1233 76 DYL-------ELVPLDPAYrVPFPDGRALDLPRDLERTAAE-LERLFPgdaeayrrflaelrrLYDALLEDLLyrPLLSL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 147 KD--------------DQSLGEFFRRRVGDEVVENLIEPLlsGIYAG-DIDK----LSLMStfpqfyqteqkHRSLILGM 207
Cdd:COG1233 148 RDllrplalarllrllLRSLRDLLRRYFKDPRLRALLAGQ--ALYLGlSPDRtpalYALIA-----------YLEYAGGV 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 208 KktRPQGSGQQLTakkqgqfqtlstglQTLVEEIEKQlkltKVYKGTKVTK-LSHSGSCYSLELDNGVTLDADSVIVTA- 285
Cdd:COG1233 215 W--YPKGGMGALA--------------DALARLAEELg--gEIRTGAEVERiLVEGGRATGVRLADGEEIRADAVVSNAd 276
|
330
....*....|.
gi 417115 286 PHKAAAGMLSE 296
Cdd:COG1233 277 PAHTYLRLLGE 287
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
5-442 |
8.41e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 57.59 E-value: 8.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 5 KKHVVIIGGGITGLAAAFymekEIKEKNLPleLTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDL--G 82
Cdd:PRK07208 4 KKSVVIIGAGPAGLTAAY----ELLKRGYP--VTVLEADPVVGGISRTVTYKGNRFDIGGHRFFSKSPEVMDLWNEIlpD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 83 LEHLLVNNatgQSYVLVNRTLHPMPKGAV-----MGIPTKIApfvstGLFSLsGKARAAmdfilpasKTKDDQSLGEFFR 157
Cdd:PRK07208 78 DDFLLRPR---LSRIYYRGKFFDYPLKAFdalknLGLWRTAK-----CGASY-LKARLR--------PRKEEDSFEDWVI 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 158 RRVGDEV--------VENL--IEP-LLSGIYAGD-IDKLSLMSTFpqfyqteqkhRSLILGMKKTRPQGSGQQLTAKKQG 225
Cdd:PRK07208 141 NRFGRRLystffkgyTEKVwgVPCdEISADWAAQrIKGLSLGKAI----------RNALRRSLGLKRRNKEVETSLIEEF 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 226 QFQTLSTGL--QTLVEEIEKQlkLTKVYKGTKVTKLSHSGSC------YSLELDNGVTLDADSVIVTAPHKAAAGMLSEL 297
Cdd:PRK07208 211 RYPKLGPGQlwETAAEKLEAL--GGKVVLNAKVVGLHHDGDGriavvvVNDTDGTEETVTADQVISSMPLRELVAALDPP 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 298 PAishlknMHSTSVAN---------VALGFPEGSV-----QMEHEGTgFVISRNSDFaitactwtnKKW-PHAAPEGKTl 362
Cdd:PRK07208 289 PP------PEVRAAAAglryrdfitVGLLVKELNLfpdnwIYIHDPD-VKVGRLQNF---------NNWsPYLVPDGRD- 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 363 lrAYVG-----KAGDEsIVDLSDNDIINIVLEDLKKVMNIN-GEPEMTCVTRWHESMPQYHvGHKQRIKELREALASAYP 436
Cdd:PRK07208 352 --TWLGleyfcFEGDD-LWNMSDEDLIALAIQELARLGLIRpADVEDGFVVRVPKAYPVYD-GTYERNVEIIRDLLDHFP 427
|
....*.
gi 417115 437 GVYMTG 442
Cdd:PRK07208 428 NLHLVG 433
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
10-68 |
1.36e-08 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 51.38 E-value: 1.36e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 417115 10 IIGGGITGLAAAFYMEKEikeknlPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFL 68
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKR------GFRVLVLEKRDRLGGNAYSYRVPGYVFDYGAHIFH 53
|
|
| PLN02568 |
PLN02568 |
polyamine oxidase |
1-63 |
1.75e-06 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 50.21 E-value: 1.75e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 417115 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLpLELTLVEASPRVGGKIQTVKKDGYIIERG 63
Cdd:PLN02568 1 MVAKKPRIVIIGAGMAGLTAANKLYTSSAANDM-FELTVVEGGDRIGGRINTSEFGGERIEMG 62
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
1-47 |
5.06e-06 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 48.80 E-value: 5.06e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 417115 1 MSDGKKHVVIIGGGITGLAAAFYMekeIKEKNLPLELTLVEASPRVG 47
Cdd:COG4529 1 MTGARKRIAIIGGGASGTALAIHL---LRRAPEPLRITLFEPRPELG 44
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
5-45 |
1.45e-04 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 43.97 E-value: 1.45e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 417115 5 KKHVVIIGGGITGLAAAFYMEKEIKEKnlpLELTLVEASPR 45
Cdd:COG1252 1 MKRIVIVGGGFAGLEAARRLRKKLGGD---AEVTLIDPNPY 38
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
8-63 |
1.49e-04 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 43.91 E-value: 1.49e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 417115 8 VVIIGGGITGLAAAFYMEkeikekNLPLELTLVEASPRVGGKIQTVKKDGYIIERG 63
Cdd:PLN02268 3 VIVIGGGIAGIAAARALH------DASFKVTLLESRDRIGGRVHTDYSFGFPVDMG 52
|
|
| MCRA |
pfam06100 |
MCRA family; The MCRA (myosin-cross-reactive antigen) family of proteins were thought to have ... |
6-63 |
1.77e-04 |
|
MCRA family; The MCRA (myosin-cross-reactive antigen) family of proteins were thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis. More recent work shows that these proteins act as hydratase enzymes that convert linoleic acid and oleic acid to their respective 10-hydroxy derivatives. It has been suggested that MCRA proteins catalyze the first step in conjugated linoleic acid production. Proteins in this family act in an FAD dependent manner. The structure of a fatty acid double-bond hydratase from Lactobacillus acidophilus has been recently solved showing four structural domains.
Pssm-ID: 428767 Cd Length: 492 Bit Score: 44.00 E-value: 1.77e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 417115 6 KHVVIIGGGITGLAAAFYMekeIKEKNLPLE-LTLVEASPRVGGKIQTVK--KDGYIIERG 63
Cdd:pfam06100 1 KKAYIVGSGIASLAAAVFL---IRDAQMPGEnIHILEELDVAGGSLDGAGdpEKGYVIRGG 58
|
|
| Ppro0129 |
COG2907 |
Predicted flavin-containing amine oxidase [General function prediction only]; |
4-53 |
2.65e-04 |
|
Predicted flavin-containing amine oxidase [General function prediction only];
Pssm-ID: 442151 [Multi-domain] Cd Length: 423 Bit Score: 43.18 E-value: 2.65e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 417115 4 GKKHVVIIGGGITGLAAAFYMEKEikeknlpLELTLVEASPRVGGKIQTV 53
Cdd:COG2907 2 ARMRIAVIGSGISGLTAAWLLSRR-------HDVTLFEANDRLGGHTHTV 44
|
|
| COG4716 |
COG4716 |
Myosin-crossreactive antigen (function unknown) [Function unknown]; |
5-63 |
4.42e-04 |
|
Myosin-crossreactive antigen (function unknown) [Function unknown];
Pssm-ID: 443751 Cd Length: 578 Bit Score: 42.51 E-value: 4.42e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 5 KKHVVIIGGGITGLAAAFYMekeIKEKNLPLE-LTLVEASPRVGGKIQTVK--KDGYIIeRG 63
Cdd:COG4716 22 DKSAYLVGSGLASLAAAAFL---IRDGQMPGEnIHILEELDLPGGSLDGAGdpEKGYVI-RG 79
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
7-48 |
9.25e-04 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 41.23 E-value: 9.25e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 417115 7 HVVIIGGGITGLAAAFYMEKEikeknlPLELTLVEASPRVGG 48
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARR------GLSVTLLERGDDPGS 36
|
|
| PRK13977 |
PRK13977 |
myosin-cross-reactive antigen; Provisional |
5-63 |
1.41e-03 |
|
myosin-cross-reactive antigen; Provisional
Pssm-ID: 237575 Cd Length: 576 Bit Score: 40.96 E-value: 1.41e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 417115 5 KKHVVIIGGGITGLAAAFYMekeIKEKNLPLE-LTLVEASPRVGGKI--QTVKKDGYIIeRG 63
Cdd:PRK13977 22 NKKAYIIGSGLASLAAAVFL---IRDGQMPGEnITILEELDVPGGSLdgAGNPEKGYVA-RG 79
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
8-63 |
1.52e-03 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 40.85 E-value: 1.52e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 417115 8 VVIIGGGITGLAAAfymeKEIKEKNLPlELTLVEASPRVGGKIQTVKKDGYIIERG 63
Cdd:PLN02676 29 VIIVGAGMSGISAA----KTLSEAGIE-DILILEATDRIGGRMRKANFAGVSVELG 79
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
8-48 |
3.01e-03 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 39.85 E-value: 3.01e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 417115 8 VVIIGGGITGLAAAFYMekeiKEKNLPleLTLVEASPRVGG 48
Cdd:COG2072 9 VVVIGAGQAGLAAAYHL----RRAGID--FVVLEKADDVGG 43
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
3-103 |
4.81e-03 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 38.96 E-value: 4.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 3 DGKKHVVIIGGGITG----LAAAFYMEKEIKEKNLP---LELTLVEASPRVGG-------------------------KI 50
Cdd:COG1252 147 RRLLTIVVVGGGPTGvelaGELAELLRKLLRYPGIDpdkVRITLVEAGPRILPglgeklseaaekelekrgvevhtgtRV 226
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 417115 51 QTVKKDGYIIERGpdSFLERKK-------SAPQLVKDLGLEHllvnNATGQsyVLVNRTL 103
Cdd:COG1252 227 TEVDADGVTLEDG--EEIPADTviwaagvKAPPLLADLGLPT----DRRGR--VLVDPTL 278
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
5-23 |
7.30e-03 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 38.35 E-value: 7.30e-03
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
4-48 |
8.43e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 38.32 E-value: 8.43e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 417115 4 GKKHVVIIGGGITGLAAAfymekeIKEKNLPLELTLVEASP--RVGG 48
Cdd:PRK06847 3 AVKKVLIVGGGIGGLSAA------IALRRAGIAVDLVEIDPewRVYG 43
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
1-49 |
9.77e-03 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 38.30 E-value: 9.77e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 417115 1 MSDGKKHVVIIGGGITGLAAAfymekeikeknlpLEL-------TLVEASPRVGGK 49
Cdd:COG1148 136 KVPVNKRALVIGGGIAGMTAA-------------LELaeqgyevYLVEKEPELGGR 178
|
|
| |
