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Conserved domains on  [gi|426506484|emb|CCK14525|]
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FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB [Cronobacter universalis NCTC 9529]

Protein Classification

LbetaH domain-containing protein( domain architecture ID 10082836)

LbetaH (Left-handed parallel beta-Helix) domain-containing protein similar to Escherichia coli uncharacterized acetyltransferase YdcK

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LbetaH cd00208
Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each ...
 66-145 1.97e-11

Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.


:

Pssm-ID: 100038 [Multi-domain]  Cd Length: 78  Bit Score: 57.64  E-value: 1.97e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 426506484  66 AFIEHRAQVFENAILEGNdendVWVCDCAKIHGHARLVAGTEEN--ASPTVRYSSDVSGHAVIEGECLLGHHVRVGEHAV 143
Cdd:cd00208    1 VFIGEGVKIHPKAVIRGP----VVIGDNVNIGPGAVIGAATGPNekNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAV 76


                 ..
gi 426506484 144 IT 145
Cdd:cd00208   77 VT 78
 
Name Accession Description Interval E-value
LbetaH cd00208
Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each ...
 66-145 1.97e-11

Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.


Pssm-ID: 100038 [Multi-domain]  Cd Length: 78  Bit Score: 57.64  E-value: 1.97e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 426506484  66 AFIEHRAQVFENAILEGNdendVWVCDCAKIHGHARLVAGTEEN--ASPTVRYSSDVSGHAVIEGECLLGHHVRVGEHAV 143
Cdd:cd00208    1 VFIGEGVKIHPKAVIRGP----VVIGDNVNIGPGAVIGAATGPNekNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAV 76


                 ..
gi 426506484 144 IT 145
Cdd:cd00208   77 VT 78
 
Name Accession Description Interval E-value
LbetaH cd00208
Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each ...
 66-145 1.97e-11

Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.


Pssm-ID: 100038 [Multi-domain]  Cd Length: 78  Bit Score: 57.64  E-value: 1.97e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 426506484  66 AFIEHRAQVFENAILEGNdendVWVCDCAKIHGHARLVAGTEEN--ASPTVRYSSDVSGHAVIEGECLLGHHVRVGEHAV 143
Cdd:cd00208    1 VFIGEGVKIHPKAVIRGP----VVIGDNVNIGPGAVIGAATGPNekNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAV 76


                 ..
gi 426506484 144 IT 145
Cdd:cd00208   77 VT 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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