NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|429325235|ref|NP_001258836|]
View 

spermatogenesis-associated protein 33 isoform a [Homo sapiens]

Protein Classification

spermatogenesis-associated protein 33( domain architecture ID 10634102)

spermatogenesis-associated protein 33 (SPATA33) is a DUF4609 domain-containing protein that is predominantly expressed in the testis and associated with spermatogenesis

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
71-137 1.17e-38

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


:

Pssm-ID: 464689  Cd Length: 68  Bit Score: 124.97  E-value: 1.17e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 429325235   71 EKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGPYRRHRNPSTADAYNSH 137
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQ 67
 
Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
71-137 1.17e-38

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


Pssm-ID: 464689  Cd Length: 68  Bit Score: 124.97  E-value: 1.17e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 429325235   71 EKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGPYRRHRNPSTADAYNSH 137
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQ 67
 
Name Accession Description Interval E-value
DUF4609 pfam15382
Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins ...
71-137 1.17e-38

Domain of unknown function (DUF4609); This family of proteins is found in eukaryotes. Proteins in this family are typically between 70 and 139 amino acids in length.


Pssm-ID: 464689  Cd Length: 68  Bit Score: 124.97  E-value: 1.17e-38
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 429325235   71 EKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGPYRRHRNPSTADAYNSH 137
Cdd:pfam15382   1 EKPDVKQKSSKKKVVIPQIIITRASNETLISYSSTGSEEQRTIREQADWGPYSRHRNPSTVDAYNLQ 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH