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Conserved domains on  [gi|429966021|gb|ELA48018|]
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hypothetical protein VCUG_00441 [Vavraia culicis subsp. floridensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FYRN super family cl02650
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 67-120 6.62e-08

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


The actual alignment was detected with superfamily member pfam05964:

Pssm-ID: 470644  Cd Length: 51  Bit Score: 47.50  E-value: 6.62e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 429966021   67 MSVLNVGELPrPSQKQYITPTTIYPINFVSKRKYKkyngCPSKSKDKIFYLCKI 120
Cdd:pfam05964   3 LTVLSLGEIV-PDRPAFHTERYIYPVGYKSTRLYW----STKDPRKRCRYTCEI 51
FYRC super family cl02651
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 159-186 2.11e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


The actual alignment was detected with superfamily member pfam05965:

Pssm-ID: 470645  Cd Length: 83  Bit Score: 36.05  E-value: 2.11e-03
                          10        20
                  ....*....|....*....|....*....
gi 429966021  159 EEFFGLTHPQLQRIIEE-KGTEELKEYVP 186
Cdd:pfam05965  52 EDMFGLTHPAVVRLIESlPGAEKCTNYKF 80
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 67-120 6.62e-08

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 47.50  E-value: 6.62e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 429966021   67 MSVLNVGELPrPSQKQYITPTTIYPINFVSKRKYKkyngCPSKSKDKIFYLCKI 120
Cdd:pfam05964   3 LTVLSLGEIV-PDRPAFHTERYIYPVGYKSTRLYW----STKDPRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 159-186 2.11e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 36.05  E-value: 2.11e-03
                          10        20
                  ....*....|....*....|....*....
gi 429966021  159 EEFFGLTHPQLQRIIEE-KGTEELKEYVP 186
Cdd:pfam05965  52 EDMFGLTHPAVVRLIESlPGAEKCTNYKF 80
 
Name Accession Description Interval E-value
FYRN pfam05964
F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 67-120 6.62e-08

F/Y-rich N-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00541.


Pssm-ID: 461787  Cd Length: 51  Bit Score: 47.50  E-value: 6.62e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 429966021   67 MSVLNVGELPrPSQKQYITPTTIYPINFVSKRKYKkyngCPSKSKDKIFYLCKI 120
Cdd:pfam05964   3 LTVLSLGEIV-PDRPAFHTERYIYPVGYKSTRLYW----STKDPRKRCRYTCEI 51
FYRC pfam05965
F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It ...
 159-186 2.11e-03

F/Y rich C-terminus; This region is normally found in the trithorax/ALL1 family proteins. It is similar to SMART:SM00542.


Pssm-ID: 461788  Cd Length: 83  Bit Score: 36.05  E-value: 2.11e-03
                          10        20
                  ....*....|....*....|....*....
gi 429966021  159 EEFFGLTHPQLQRIIEE-KGTEELKEYVP 186
Cdd:pfam05965  52 EDMFGLTHPAVVRLIESlPGAEKCTNYKF 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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