|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-705 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1359.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 1 ESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE 80
Cdd:PRK10044 52 ESAWGPAATIAAKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 81 GQSQNNYLNGLKLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGF 160
Cdd:PRK10044 132 GQSQNNYLDGLKLQGNFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 161 DFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPN 240
Cdd:PRK10044 212 DFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPN 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 241 GKRLPTDFNEGAKNNTYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKG 320
Cdd:PRK10044 292 GKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKG 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 321 HYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDINAWFGYDDSVPLLNLYNPshhhhhhgsVNTD 400
Cdd:PRK10044 356 HYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGP---------VNTD 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 401 FDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNG 480
Cdd:PRK10044 427 FDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNG 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 481 VTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARG 560
Cdd:PRK10044 503 ITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARG 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 561 VEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKH*ASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS 640
Cdd:PRK10044 583 VELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS 662
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4389208 641 FKVGSYTVVDALVRYDLARVG*AGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 705
Cdd:PRK10044 663 FKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
11-705 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 602.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 11 AARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNG 90
Cdd:COG4773 48 TAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 91 LKLQGnfYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDG 170
Cdd:COG4773 123 LPLGG--FGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 171 VYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNE 250
Cdd:COG4773 201 TLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 251 GAKNNTYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVD 330
Cdd:COG4773 275 GEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLT----------------RYASAR 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 331 DEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDINAWfgyddSVPLLNLYNPSHHHHhhgsvntdfdfnakDPAN 410
Cdd:COG4773 339 DGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSA-----TAGTINIYNPVYGNL--------------PEPD 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 411 SGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSE 489
Cdd:COG4773 400 FDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSE 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 490 SFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARGVEIEAKAAL 569
Cdd:COG4773 480 SFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGEL 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 570 SASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKH*ASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTV 648
Cdd:COG4773 560 TPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTL 639
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 4389208 649 VDALVRYDLARvg*aGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 705
Cdd:COG4773 640 VDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
27-705 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 549.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 27 KVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 106
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 107 *LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQ 186
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 187 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEK*V 264
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 265 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 344
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 345 SKFATGDIDHTLLTGV-DF*R*RNDINAWFGYDDSVPLLNLYNPShhhhhhgsvNTDFDFNAKDPANSGPYRILNkqkqt 423
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSA---------RTDIGDSPKDRALSSTTKALN----- 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 424 GVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGK 499
Cdd:TIGR01783 365 GVALQRILLADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGN 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 500 DGNIFAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSY 579
Cdd:TIGR01783 445 SGDILEPEKGKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGY 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 580 TYTDAEYTTDT--TYKGNTPAQVPKH*ASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDL 657
Cdd:TIGR01783 524 TYTDAEFTEDTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDL 602
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 4389208 658 ARVg*AGSNVALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 705
Cdd:TIGR01783 603 TKK--KNLTLALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
31-705 |
3.53e-115 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 360.23 E-value: 3.53e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 31 SISVVTAEE*ALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 106
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 107 *LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDSLDDDGVYSYRLTGLARSA 183
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 184 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 257
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 258 SRNEK*VGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 337
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 338 SVDTQLQSKFATGDIDHTLLTGVDF*R*RNDinawfgyddsvpllnlynpshhhhhhgsvntdfdfnakdpansgpyril 417
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------------- 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 418 nkQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS 495
Cdd:cd01347 332 --EKQTALYAQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPS 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 496 QVGKDGNI------------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNL*ADPEGS-----FFSVEGGEIRA 558
Cdd:cd01347 410 LGELYGGGshggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNTglglvTVYVNGGKARI 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 559 RGVEIEAKAALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKH*ASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDP 637
Cdd:cd01347 489 RGVELEASYDLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADT 565
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4389208 638 A---NSFKVGSYTVVDALVRYDLarvg*AGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 705
Cdd:cd01347 566 AngnNTVKVPGYTLVDLSASYQF----TKNLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
202-704 |
5.86e-45 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 167.64 E-value: 5.86e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 202 TWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEK*VGYSFDHEFNDTFTVRQN 281
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 282 LRFAENKTSQNSVYGYGVCSDPANayskqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 361
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGA-------------------GDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 362 F*R*RNDinaWFGYDDsvPLLNLYNPshhhhhhgsvntdfdfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTL 440
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDP--------------------ANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTL 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 441 GGRYDWADQESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGN-IFA 505
Cdd:pfam00593 194 GLRYDHYSTDGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNpDLK 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 506 PSKGKQYEVGVKYvpEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSY 579
Cdd:pfam00593 274 PETSDNYELGLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGY 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 580 TYTDAEYTTDTTYKGNTPAQVPKH*ASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYD 656
Cdd:pfam00593 352 TYTDADDDADADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYR 428
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 4389208 657 LARvg*aGSNVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 704
Cdd:pfam00593 429 LNK----NLTLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
1-705 |
0e+00 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 1359.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 1 ESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE 80
Cdd:PRK10044 52 ESAWGPAATIAAKRSATGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAS 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 81 GQSQNNYLNGLKLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGF 160
Cdd:PRK10044 132 GQSQNNYLDGLKLQGNFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLKEVQFKMGTDNLFQTGF 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 161 DFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPN 240
Cdd:PRK10044 212 DFSDALDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPSFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPN 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 241 GKRLPTDFNEGAKNNTYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSdpanayskqcaalapaDKG 320
Cdd:PRK10044 292 GKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQRSVYGYGVCS----------------DKG 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 321 HYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDINAWFGYDDSVPLLNLYNPshhhhhhgsVNTD 400
Cdd:PRK10044 356 HYLNRGYVVDDEKLQNFSVDTQLQSKFATGDVDHTLLTGVDFMRMRNDINAWFGYADSVPLLNLYGP---------VNTD 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 401 FDFNakdpANSGPYRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNG 480
Cdd:PRK10044 427 FDFN----ANSGPYQILNKQKQTGLYVQDQAEWDKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVNYLFDNG 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 481 VTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARG 560
Cdd:PRK10044 503 ITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTNNLTADPENSFFSVQGGEIRARG 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 561 VEIEAKAALSASVNVVGSYTYTDAEYTTDTTYKGNTPAQVPKH*ASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS 640
Cdd:PRK10044 583 VELEAKAALSANVNVTGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANS 662
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 4389208 641 FKVGSYTVVDALVRYDLARVG*AGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 705
Cdd:PRK10044 663 FKVGSYTVVDALVKYDLARFGMAGSSVALNVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 727
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
11-705 |
0e+00 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 602.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 11 AARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFaaegQSQNNYLNG 90
Cdd:COG4773 48 TAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYD-GGGRDSFSIRGF----SIDNYLRDG 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 91 LKLQGnfYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDG 170
Cdd:COG4773 123 LPLGG--FGGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEDG 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 171 VYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVeplpngKRLPTDFNE 250
Cdd:COG4773 201 TLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGFLPLDGTL------LDLPRSTNL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 251 GAKNNTYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPANAYSkqcaalapadkghylaRKYVVD 330
Cdd:COG4773 275 GEPWDYYDTETTTLFAELEHRFNDDWSLRANARYSDSDRDGRSAYAYGAPDAATGTLT----------------RYASAR 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 331 DEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDINAWfgyddSVPLLNLYNPSHHHHhhgsvntdfdfnakDPAN 410
Cdd:COG4773 339 DGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSA-----TAGTINIYNPVYGNL--------------PEPD 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 411 SGPYRILNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSE 489
Cdd:COG4773 400 FDASDTDTTTRQTGLYAQDQISLtDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSE 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 490 SFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARGVEIEAKAAL 569
Cdd:COG4773 480 SFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNPNFYVQVGEVRSRGVELELSGEL 559
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 570 SASVNVVGSYTYTDAEYTTDTT-YKGNTPAQVPKH*ASLWADYTFFDGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTV 648
Cdd:COG4773 560 TPGLNLIAGYTYTDAKITKDADaLEGKRLTNVPRHTASLWTTYRFPSGALKGLGLGGGVRYVGERYGDAANTFTLPSYTL 639
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 4389208 649 VDALVRYDLARvg*aGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 705
Cdd:COG4773 640 VDAGARYDLGK----NWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
20-705 |
0e+00 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 549.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 20 KTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTrGASNTYDHLIIRGFAAegqSQNNYLNGLKLQGNFYn 99
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGA-GEGGNGDSFSIRGFSA---SGDIYVDGLRDPGQYR- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 100 davIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDgvYSYRLTGL 179
Cdd:COG4774 76 ---RDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDD--LAYRLNGM 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 180 ARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwLPKEGTVEPLPngkrLPTDFNEGAKNNTYSR 259
Cdd:COG4774 151 YRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYG-VPAVANGRPVD----VDRSTFYGQPDDYSDS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 260 NEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcsdpanayskqcaalapADKGHYLARKYVVDDEKLQNFSV 339
Cdd:COG4774 226 ETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTG------------------GNATGTVTRSAYRRDQDNDTLSN 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 340 DTQLQSKFATGDIDHTLLTGVDF*R*RNDiNAWFGYDDSVPLLNLYNPSHHHHHHGSVNTDFDFNakdpansgpyrilNK 419
Cdd:COG4774 288 QTDLTGKFDTGGVKHTLLAGVEYSREDSD-NARYSGGGTAPTVNLYNPVYGAPVTGPTLGGADND-------------SR 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 420 QKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQV 497
Cdd:COG4774 354 TDTTGLYLQDTISLtDRWSLLAGLRYDRFDTDYTDRTTGaTTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGGGA 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 498 GK---DGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARGVEIEAKAALSASVN 574
Cdd:COG4774 434 PSlsnAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTDPANPGVYVQTGEQRSRGVELEATGELTPGWS 513
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 575 VVGSYTYTDAEYT--TDTTYKGNTPAQVPKH*ASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDAL 652
Cdd:COG4774 514 VLAGYTYLDAEITksANAANVGNRLPNVPRHSASLWTTYDL---PLPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAG 590
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 4389208 653 VRYDLARvg*aGSNVALHVNNLFDREYVASCFNTYGCFWGAERQVVATATFRF 705
Cdd:COG4774 591 ASYRLNK----NLTLRLNVNNLTDKRYYASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
27-705 |
0e+00 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 549.32 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 27 KVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAEGQSQNNYLNGLKLQGNfYNDAVIDPY 106
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFGNITIRGFGLEVDIDNVYLDGVPLLSR-GNLAIVDPA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 107 *LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRLTGLARSANAQ 186
Cdd:TIGR01783 80 MVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQDGDSF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 187 QKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPlpngKRLPTDFNEG--AKNNTYSRNEK*V 264
Cdd:TIGR01783 160 YDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLPASGGTSG----RDLSSDRYLGtsSNRNYDDREYLSY 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 265 GYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDpanayskqcaalapadkGHYLARKYVVDDEKLQNFSVDTQLQ 344
Cdd:TIGR01783 236 GLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSD-----------------GGLFGRSLTVVNVKQDRVQIDAGLD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 345 SKFATGDIDHTLLTGV-DF*R*RNDINAWFGYDDSVPLLNLYNPShhhhhhgsvNTDFDFNAKDPANSGPYRILNkqkqt 423
Cdd:TIGR01783 299 GEFETGPIEHDLLLGVsYGQRTTNRFNNTGYPSDNIYSLTATSSA---------RTDIGDSPKDRALSSTTKALN----- 364
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 424 GVYVQDQAQWDKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSSQ----VGK 499
Cdd:TIGR01783 365 GVALQRILLADKWTLTLGGRYDSVDVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYypkgAGN 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 500 DGNIFAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNL*ADPEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSY 579
Cdd:TIGR01783 445 SGDILEPEKGKNYELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGY 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 580 TYTDAEYTTDT--TYKGNTPAQVPKH*ASLWADYTFFDGPLsGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDL 657
Cdd:TIGR01783 524 TYTDAEFTEDTngDTQGNTVPFVPKHTASLWASYAPPVGDN-GLTLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDL 602
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 4389208 658 ARVg*AGSNVALHVNNLFDREYVASCF---NTYGCFWGAERQVVATATFRF 705
Cdd:TIGR01783 603 TKK--KNLTLALNVNNLFDRDYYTSGYrwgPSAYIYPGAPRTVGLSVSYDF 651
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
1-704 |
4.61e-147 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 445.78 E-value: 4.61e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 1 ESAWGPAATIAARQSATGTKTDTPIQKVPQSISVV-TAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAA 79
Cdd:PRK14050 52 ATATGPVDGYVAKATATGSKTDTPITEIPQSVSVVgRQEMDDRGVTNKVDEALRYTPGVLSQPFGTDGDTDWFYIRGFDA 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 80 egQSQNNYLNGLKLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTG 159
Cdd:PRK14050 132 --TQTGVFLDGLNLFSYGFGGFQIDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLDEPLYYTEIGINSYGNAFTG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 160 FDFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPET-GYYGWLPKEGTVEPL 238
Cdd:PRK14050 210 FDVGDKLSDDGTVRYRVTGKVAGGDNYSDYSEDLRGFIMPQITYAPDDATSLTVYGYLSGLDQVhVGNGFLPYVGTVVDA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 239 PNGKrLPTDFNEGAKN-NTYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGVcSDPANAYSKqcaalaPA 317
Cdd:PRK14050 290 PFGK-IDRDAFYGEPDiDNGSYAQQMLGYEFSHEFDNGWTFSQNARYGHLHKHEKGPYTYGY-VGGATGLPD------PT 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 318 DKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RND-INAWFGyddSVPlLNLYNPShhhhhhgs 396
Cdd:PRK14050 362 GPDYMLNRIGFEHRSKVDSFSIDNRLEGEFDTGALTHNLLFGLDYKYYRLDqVQACCG---ATP-ISATNPV-------- 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 397 vntdfdFNAKDPANSgPY--RILNKQkQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVaGTTDKRDDKQFTWRGGV 473
Cdd:PRK14050 430 ------YGTTQGANF-VYldQILTQQ-QIGIYAQDQIRFgDGWLVTLNGRYDYVDTDSDARI-GTSYESNDGALSGRAGL 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 474 NYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPeGSFFSVEG 553
Cdd:PRK14050 501 AYEFDNGLTPYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEPSFIDGLITASVFQITKKNVTVTDP-LTFASTQL 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 554 GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDT--TYKGNTPAQVPKH*ASLWADYTFFDGPLSGLTLGTGGRYTG 631
Cdd:PRK14050 580 GEVRSRGFELEGKVNLDDNWKALASFTYTDLEITEDAnpSLIGNSPYLVPETQASLWLDYAVTDGAFEGVSLGAGVRYQG 659
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 4389208 632 SSYGDPANSFKVGSYTVVDALVRYDLARVG*agsnVALHVNNLFDREYVASCFNTYGCFWGAERqvvaTATFR 704
Cdd:PRK14050 660 ESWADEANTLKVPAATLFDAAIRYEKNDWG-----ASLNVANLFDKEYVAGCQGLLVCGYGESR----TITLK 723
|
|
| PRK14049 |
PRK14049 |
ferrioxamine B receptor precursor protein; Provisional |
12-705 |
1.68e-140 |
|
ferrioxamine B receptor precursor protein; Provisional
Pssm-ID: 172541 [Multi-domain] Cd Length: 726 Bit Score: 428.94 E-value: 1.68e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 12 ARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqsqnnYLNGL 91
Cdd:PRK14049 63 ATSSATGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGARVGAFGFDPRFDAFFVRGFDV-------TYTGV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 92 kLQGNFYNDAVID------PY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDS 165
Cdd:PRK14049 136 -FRDNLRQPGASSsifktePYGLEGVSILRGPSSALYGASGAGGLFNLITKRPTEEPLREVQVQYGTNNRYQGQFDFSGP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 166 LDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQ--NEPETGYYGWLPKEGTVEPLPNGKr 243
Cdd:PRK14049 215 VNETDPVYYRLTGLLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVLGEYSrtKTGGTAAYYNDPLTGEVTDIFAGN- 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 244 lpTDFNEgaknntYSRNEK*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYGYGvcSDPANayskqcAALAPADKGHYl 323
Cdd:PRK14049 294 --PAFND------SVQKQGRIGYEFEHRLNDTFVFRQNARVSTLNIDADWAFAYA--PNAAD------PTLLDSSAGTY- 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 324 arkyvvdDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDINAWFGYDdsvPLLNLYNPSHHHHHHGsvnTDFDF 403
Cdd:PRK14049 357 -------DERLTAFVIDNQLEAKFDTGAFEHTLLAGVDYTKLRFRALNGRGVS---PPLDTKNPTQGRPVAA---IDFST 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 404 nakdpansgpyRILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQES----LNRVAGTTDKRDDKQFTWRGGVNYLFDN 479
Cdd:PRK14049 424 -----------RTVQDQWQLGTYLQDQIRYDAWTLTAGGRYDWVSTDTdttdLATDSLTTVSQKDKEFSGRIGLTYETDF 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 480 GVTPYFSYSESFEPSSQVGKD-GNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL----*ADPEG-SFFSVEG 553
Cdd:PRK14049 493 GLAPYISYSTAFSPNAGFNRAtNQPFKPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLyyevVFLAAGpTNIQVQR 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 554 GEIRARGVEIEAKAALSASVNVVGSYTYTDA---EYTTDTTykGNTPAQVPKH*ASLWADYTFF-DGPLSGLTLGTGGRY 629
Cdd:PRK14049 573 GKLRSRGFELEANTSLDNGLSLIASYTYTDVkiiQGPEGTI--GNEVSSVPNHMASAWAHYTLPeGGPLYGLGLGAGARF 650
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 4389208 630 TGSSYGDPANSFKVGSYTVVDALVRYDLARVG*AGSNVALHVN--NLFDREYvASCFNTYgCFWGAERQVVATATFRF 705
Cdd:PRK14049 651 VGSSYGNDQNTFKNSSRVLFDASVGYDFAAIDKKYEGLMLQVNatNLFDRRK-AVCTAGF-CYRDQGRTVIGSLRYNW 726
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
31-705 |
3.53e-115 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 360.23 E-value: 3.53e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 31 SISVVTAEE*ALHQPKSVKEALSYTPGVSVgTRGASNTYDHLIIRGFAAEGQSQnnYLNGLKLQGNFYNDAV----IDPY 106
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSV-TRGGGGGGSTISIRGFGPDRTLV--LVDGLPLASSNYGRGVdlntIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 107 *LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTD---SLFQTGFDFSDSLDDDGVYSYRLTGLARSA 183
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 184 NAQQ------KGSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY 257
Cdd:cd01347 158 DGTIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDR 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 258 SRNEK*VGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkGHYLARKYVVDDEKLQNF 337
Cdd:cd01347 238 YRKRASLGLEHDL-NDTGWTLRANLSYSYTDNDGDPLILNGGNNAA----------------GGDLGRSGYSSERDTTQL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 338 SVDTQLQSKFATGDIDHTLLTGVDF*R*RNDinawfgyddsvpllnlynpshhhhhhgsvntdfdfnakdpansgpyril 417
Cdd:cd01347 301 GFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------------------- 331
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 418 nkQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAG-TTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPSS 495
Cdd:cd01347 332 --EKQTALYAQDTIELtDDLTLTLGLRYDHYDQDSKDTIAGgTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPS 409
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 496 QVGKDGNI------------FAPSKGKQYEVGVKYVPEDRpIVVTGAVYNLTKTNNL*ADPEGS-----FFSVEGGEIRA 558
Cdd:cd01347 410 LGELYGGGshggtaavgnpnLKPEKSKQYELGLKYDPGDG-LTLSAALFRIDIKNEIVSTPTNTglglvTVYVNGGKARI 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 559 RGVEIEAKAALSASVNVVGSYTYTDAEYT-TDTTYKGNTPAQVPKH*ASLWADYTFfdgPLSGLTLGTGGRYTGSSYGDP 637
Cdd:cd01347 489 RGVELEASYDLTDGLGLTGSYTYTDTEVKrTDGATTGNRLPGIPKHTANLGLDYEL---PDEGLTAGGGVRYRGKQYADT 565
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 4389208 638 A---NSFKVGSYTVVDALVRYDLarvg*AGSNVALHVNNLFDREYVASC---FNTYGCFWGAERQVVATATFRF 705
Cdd:cd01347 566 AngnNTVKVPGYTLVDLSASYQF----TKNLTLRLGVNNLFDKDYYTSLsvrGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
17-688 |
5.18e-90 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 294.43 E-value: 5.18e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQGN 96
Cdd:COG1629 7 TATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAG--QISIRGFGGGGNRVLVLVDGVPLNDP 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 97 FYND---AVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGfdfSDSLDDDGVYS 173
Cdd:COG1629 85 SGGDgglSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRAS---LSLSGGNGKLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 174 YRLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTF-LSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGA 252
Cdd:COG1629 162 YRLSASYRDSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLsASYSDSDQDSPGYLTLAALRPRGAMDDGTNPYSNDTDDN 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 253 KNNTYSrnek*VGYSFDHeFNDTFTVRQNLRFAENKTSQNSVYGYGVCSDPanayskqcaalapadkghylarKYVVDDE 332
Cdd:COG1629 242 TRDRYS-----LSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGG----------------------TLEQTDF 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 333 KLQNFSVDTQLQSKFATGDiDHTLLTGVDF*R*RNDINAwfgyddsvpllnlYNPSHHHHHHGSVNTDFDFNakdpansg 412
Cdd:COG1629 294 DNRTYGLELRLTYDLGFGG-KHTLLVGLDYQRQDLDGSG-------------YPLDLGSGSLPTLTSGADDD-------- 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 413 pyrilNKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRVAGTTD---KRDDKQFTWRGGVNYLFDNGVTPYFSYS 488
Cdd:COG1629 352 -----GTTTSLALYAQDTYKLtDKLTLTAGLRYDYVSYDVDDTVTGTDSasgSRSYSAFSPSLGLTYQLSPNLSLYASYS 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 489 ESFEPSS-----QVGKDGNIFA-----PSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTN-----NL*ADPEGSFFSVEG 553
Cdd:COG1629 427 RGFRAPTfgelyANGTDPYSVGnpdlkPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNeilsvPLPNDSGFSTYYTNA 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 554 GEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTT----YKGNTPAQVPKH*ASLWADYTFFDgplsGLTLGTGGRY 629
Cdd:COG1629 507 GKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDgsadLDGNRLPGVPPLTANLGLTYEFPG----GWSLGLGVRY 582
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 630 TGSSYGDPANSFKV-GSYTVVDALVRYDLARVG*agsNVALHVNNLFDREYVASCFNTYG 688
Cdd:COG1629 583 VGDRYLDDANTQGApGGYTLVDLGAGYRFGDNL----TLSLGVDNLFDKKYATSLSVRAS 638
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
17-705 |
6.16e-58 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 208.24 E-value: 6.16e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTD-TPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVgtRGASNTYDHL-I-IRGFAAEGQSQNN-YLNGLK 92
Cdd:COG4772 29 TGSRAAeARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVNV--QEEDGFGLRPnIgIRGLGPRRSRGITlLEDGIP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 93 L------QGNFYNDAVIDpy*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSL 166
Cdd:COG4772 107 IapapygDPAAYYFPDLE--RMERIEVLRGAAALRYGPQTVGGAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGTV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 167 DDDGVYsyrLTGLARSANAQQKGSEEQRYAIAPAFTWRPDDKTNFTF-LSYFQNEPETgyYGWLPkegtveplpngkrlP 245
Cdd:COG4772 185 GNFGYL---VEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLkFQYYDEDANT--PGGLT--------------D 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 246 TDFNEG-----AKNNTYSRNEK*VGYSFDHEFNDTFTVrqNLRFAENKTSQNSVYGYGVcSDPANayskqcaalaPADKG 320
Cdd:COG4772 246 AQFDADprqsyRPADQFDTRRTQLSLRYEHQLSDNTTL--TTTAYYNDFSRNWYIRQNT-ADPNT----------PGLGL 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 321 HYLARKYvvddeklQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDinaWFGYDDSVPLlnlynpshhhhhhGSVNTD 400
Cdd:COG4772 313 RGNPRGY-------RSYGIEPRLTHRFELGGVPHTLEVGLRYHREEED---RKQYVNTYGQ-------------GRSGAG 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 401 FDFNAKDPANSgpyrilnkqkqTGVYVQDQAQW-DKVLVTLGGRYDWADQESLNRV-----AGTTDKRDDKQFTWRGGVN 474
Cdd:COG4772 370 LRRDRRFSADA-----------LAAYAQNRFELtGRLTLTPGLRYEHIRRDRTDRYstrtgGDDSGSNSYSEFLPGLGLL 438
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 475 YLFDNGVTPYFSYSESFEP------SSQVGKDGNIfAPSKGKQYEVGVKYVPEDRpiVVTGAVYNLTKTNNL-----*AD 543
Cdd:COG4772 439 YQLTDNLQLYANVSRGFEPptfgdlAYGNGGNPDL-KPEKSWNYELGTRGRIGNG--LSAEVALFYIDYDNElgscsAAG 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 544 PEGSFFsVEGGEIRARGVEIEAKAALSA----SVNVVGSYTYTDAEYTT--DTTYKGNTPAQVPKH*ASLWADYTFfdgp 617
Cdd:COG4772 516 GDRSTF-TNAGETRHQGLELALDYDLLKggglGLPLFAAYTYTDAEFTSdfGPVFAGNRLPYVPRHQLTAGLGYEH---- 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 618 lSGLTLGTGGRYTGSSYGDPANSFKVG------SYTVVDALVRYDLARvg*aGSNVALHVNNLFDREYVAS--CFNTYGC 689
Cdd:COG4772 591 -GGWTANLNGRYVSEQFTDAANTVADGsfgkipSYTVLDLSASYDFGK----NLSLFAGVNNLFDKRYIASraPNYAAGI 665
|
730
....*....|....*.
gi 4389208 690 FWGAERQVVATATFRF 705
Cdd:COG4772 666 RPGPPRTVYAGLRLKF 681
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
17-657 |
2.16e-51 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 188.53 E-value: 2.16e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE-------GQSQNNYln 89
Cdd:COG4771 33 TATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSGISIRGLGGDrvlvlidGVPVNNP-- 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 90 glkLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGT--DSLFQTGFDFSDSLD 167
Cdd:COG4771 111 ---ALGGGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSngNGTYSGSLSLGGPGD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 168 DDGV---YSYRLTGLARSANAQQK--GSEEQRYAIAPAFTWRPDDKTNFTFLSYFQNEpetgyygwlpkEGTVEPLPNGK 242
Cdd:COG4771 188 KLSFllsGSYRDRDGYLDYRNGGFvgNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQ-----------DRDGGPPTLGD 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 243 RLPTDFNEGAKNNTYSRNEK*VGYsfDHEFNDTFtvrqNLRFAENKTSQNSVYGYGVCSDPANayskqcaalapadkghy 322
Cdd:COG4771 257 TEISSDNAGDRDTTTDRGNYSLRY--NGDLGDNL----DLSLYYSRTDRDSTNGSLGGSTGSF----------------- 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 323 larkyvvDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVDF*R*RNDINAWFGYDDSvpllnlynpshhhhhhgsvntdfd 402
Cdd:COG4771 314 -------SDSDDTTYGLELDLTYPL---GGNHTLTLGAEYRYDDLDSSSFLGGADA------------------------ 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 403 fnakdpansgpyrilnKQKQTGVYVQDQAQW-DKVLVTLGGRYDWADqeslnrvagTTDKRDDKQFTWRGGVNYLFDNGV 481
Cdd:COG4771 360 ----------------SRDTYGLFAQDEWKLtDKLTLTAGLRYDYYS---------TFGASNYTAFSPRLGLRYDLSDNL 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 482 TPYFSYSESF--------EPSSQVGKDGNIFA-----PSKGKQYEVGVKYVPEDRPIVVTGAVY-----NLTKTNNL*AD 543
Cdd:COG4771 415 TLRASYGRGFrapslaelYGSGTGTPGRYVLGnpdlkPETSDNYELGLEYRLGNGGLSLSLTGFytdikDLIVLVPVGPG 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 544 PEGSFFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDTTykGNTPAQVPKH*ASLWADYTFFDGPLSGLTL 623
Cdd:COG4771 495 PGDVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDT--GEPLPNVPPHKANLGLDYRLPKWWLLLLLT 572
|
650 660 670
....*....|....*....|....*....|....
gi 4389208 624 GTGGRYTgSSYGDPANSFKVGSYTVVDALVRYDL 657
Cdd:COG4771 573 RYYGGRY-VTPPSGRLEGYTPGYTLLDLRASYKL 605
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
5-705 |
3.05e-45 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 173.07 E-value: 3.05e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 5 GPAATIAARQSATGtKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVS---VGTRGASNTYDHLIIRGFAAeg 81
Cdd:PRK09840 49 STPSLYAPDQSADP-KFSQPLADTTQTITVISEQVIKDQGATNLTEALRNVPGVGtffAGENGNTTTGDAIYMRGFDT-- 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 82 qSQNNYLNGLKLQGNFYNDAvidpY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSlFQTGFD 161
Cdd:PRK09840 126 -SNSIYVDGIRDIGSISRDT----FNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAW-FRRGTL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 162 FSDSLDDDGVySYRLTGLARSAN-AQQKGSEEQRYAIAPAFTWRPDDKTNfTFLSYF---QNE------PETGYYGWLPK 231
Cdd:PRK09840 200 DVNQVIGDTT-AVRLNVMGEKTHdAGRDKVKNERYGVAPSVAFGLGTANR-LYLNYLhvtQNNtpdggiPTIGLPGYSAP 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 232 EGTVEPLPNGKRL--------PTDFNEGAKNNTYSRnek*vgysFDHEFNDTFTVRQNLRFAenKTSQNsvygYGVCSDP 303
Cdd:PRK09840 278 SAGRAALNHAGKVdthnfygtDSDYDDSTTDTATMR--------FEHDINDNTTLRNTTRWS--RVKQD----YLLTAIM 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 304 ANAYSKQcaALAPADKGHY-LARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDInawFGYDDS-VPL 381
Cdd:PRK09840 344 GGASNIT--TPTPSDVNTWtWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTN---YGVNPVtLPA 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 382 LNLYNPSHHHHHHGsvntdFDFNAkdpANSgpyrilNKQKQT-GVYVQDQAQW-DKVLVTLGGRYDWADQE--------- 450
Cdd:PRK09840 419 VNLYHPDSSIHPGG-----LTRNG---ANA------NGQTDTfAIYAFDTLQLtRDWELNGGIRLDNYHTEydsatacgg 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 451 --------SLNRVAGTTDKRDDKQ-----FTWRGGVNYLFDNGVTPYFSYSESFEP---------SSQVGKDGN--IFAP 506
Cdd:PRK09840 485 sgrgaitcPAGVAKGSPVTTVDTAksgnlVNWKAGALYKLTENGNVYINYAVSQQPpggsnfalaQSGSGNSANrtDFKP 564
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 507 SKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGSFFsvEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEY 586
Cdd:PRK09840 565 QKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYS--QYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATV 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 587 TT--DTTYKG-NTPAQVPKH*ASLWADYTFfdgpLSGLTLGTGGRYTGS-------SYGDPANsfkVGSYTVVDALVRYD 656
Cdd:PRK09840 643 KNgkDVAQDGsSSLPYTPEHAFTLWSQYQA----TDDLSVGGGARYIGSmhrgsdgAVGTPAF---TEGYWVADAKLGYR 715
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|..
gi 4389208 657 LARvg*agsNVALHVN--NLFDREYVASCFNT-YGCFWGAERQVVATATFRF 705
Cdd:PRK09840 716 VNR------NLDLQLNvyNLFDTDYVASINKSgYRYHPGEPRTFLLTANMHF 761
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
202-704 |
5.86e-45 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 167.64 E-value: 5.86e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 202 TWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTYSRNEK*VGYSFDHEFNDTFTVRQN 281
Cdd:pfam00593 1 GWQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 282 LRFAENKTSQNSVYGYGVCSDPANayskqcaalapadkghylaRKYVVDDEKLQNFSVDTQLQSKFatgDIDHTLLTGVD 361
Cdd:pfam00593 81 LRLGLRYSSLDGDYTSNSSGLSGA-------------------GDYLSDDRLYGLYGLDGDLELSL---DLSHDLLLGVE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 362 F*R*RNDinaWFGYDDsvPLLNLYNPshhhhhhgsvntdfdfnakdPANSGPYRILNKQKQTGVYVQDQAQW-DKVLVTL 440
Cdd:pfam00593 139 LRTAGLD---YRRLDD--DAYDPYDP--------------------ANPSSSSYSDTTTDSYGLYLQDNIKLtDRLTLTL 193
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 441 GGRYDWADQESLNRVAGTTD-KRDDKQFTWRGGVNYLFDNGVTPYFSYSESF-------------EPSSQVGKDGN-IFA 505
Cdd:pfam00593 194 GLRYDHYSTDGDDGNGGGDNfSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFrapslgelygsgsGGGGGAVAGGNpDLK 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 506 PSKGKQYEVGVKYvpEDRPIVVTGAVYNLTKTNNL*ADPEGSFFSVEG------GEIRARGVEIEAKAALSASVNVVGSY 579
Cdd:pfam00593 274 PETSDNYELGLKY--DDGRLSLSLALFYIDIKNLITSDPDGPGLGGTVytytnvGKARIRGVELELSGRLWGLGLSGGGY 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 580 TYTDAEYTTDTTYKGNTPAQVPKH*ASLWADYTFfdgPLSGLTLGTGGRYTGSS---YGDPANSFKVGSYTVVDALVRYD 656
Cdd:pfam00593 352 TYTDADDDADADDTGNPLPNVPRHTANLGLTYDF---PLGGWGARLGARYVGSGerrYGDAANTFKTPGYTLVDLSAGYR 428
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 4389208 657 LARvg*aGSNVALHVNNLFD---REYVASCFNTYGCFWGAERQVVATATFR 704
Cdd:pfam00593 429 LNK----NLTLRLGVNNLFDkyyKRYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
17-705 |
7.80e-26 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 113.26 E-value: 7.80e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDhLIIRGFA-------AEGQSQNnYLN 89
Cdd:TIGR01785 7 TATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQS-INIRGLQdnrvlvvVDGARQN-YQR 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 90 GLKLQGNFYndavIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPtTEPLKE-------VQFKAGTDSLFQTGFDF 162
Cdd:TIGR01785 85 GGAHNGSLF----VDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDA-ADLLRPgqlfgglAKLSYGSNNNSFGGSVA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 163 SDSLDDDGV-----YSYRLTGLARSANAQQKGSEE-QRYAIAPAFTWRPDDKTNFTFlSYFQNEpetgyyGWLpkegtve 236
Cdd:TIGR01785 160 VAGRLDDNLdalvaATYRDGGNYRNGNKEEATNSAyVQKNLLAKLGWQLDDAQRLEF-SYFTTE------GSL------- 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 237 PLPNGKRLPTDFNEGAKNNTYSRNEK*vgysfdhefNDTFTVRQNLRFAENK--TSQNSVYGYGVCSDPANayskqcaal 314
Cdd:TIGR01785 226 DEAQNSGPGTEYVLGSSSTLLASSTR----------DRSATLTYNWTPEDNPwlDATASLYYNRTENDNDR--------- 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 315 apadKGHYLARKYVVDDEklqNFSVDTQLQSKFAtGDIDHTLLTGVDF*r*rndinawfgYDDSVPllnlynpshhhhhh 394
Cdd:TIGR01785 287 ----SARGVGREEGYQYT---TYGATLQNTSRFD-VASWSTLTYGVDW------------MKDKRR-------------- 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 395 gsvNTDFDFNAKDPANSGPYRIlnKQKQTGVYVQDQAQW--DKVLVTLGGRYDWADQESLNRVAGTTDKRDDKQFTWRGG 472
Cdd:TIGR01785 333 ---TESFDPNSVTTIVPNPPSA--KEYFFGLFLQDNIPLldDRLTLSAGLRYDHYKLSPKTTADTEAVDRSYSRWSPSLG 407
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 473 VNYLFDNGVTPYFSYSESFEPSS----------QVGKDGNIFAPS------KGKQYEVGVKYVPED-------------- 522
Cdd:TIGR01785 408 LSYKPVDWLTLYASYSQGFRAPSidelygtgdhPGTPGGYTFAPNpnlkpeTSKTWELGANLSFDNllldndqlqfkvay 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 523 --------------RPIVVTGAVYNLTKTNNL*adpegsffsveggEIRARGVEIEAKAALsASVNVVGSYTYTDAEYTT 588
Cdd:TIGR01785 488 fyndvkdfidltigVTDNVTAGMNNITQYVNID-------------GARIRGIEASASYDA-GLWATGLSYGYTIGKDQN 553
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 589 DTTYKGNtpaqVPKH*ASLWADYTFFDgplSGLTLGTGGRYTGSSY-------GDPANSFKVGSYTVVDALVRYDLARVG 661
Cdd:TIGR01785 554 TNQWLSN----IPPLKLVVTVGYRFPD---RRLDLGAKAAYYERQSespttedVAANGLLTTPGYTVVDLYATYQPNAVK 626
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 4389208 662 *AgsNVALHVNNLFDREYVAScFNTYGCfwGAERQVVATATFRF 705
Cdd:TIGR01785 627 GL--TVRFGVNNLTDRKYTPA-QSVPGA--GPGRNFKGSVKYQF 665
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
24-129 |
5.29e-20 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 85.40 E-value: 5.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 24 PIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGaSNTYDHLIIRGFAaeGQSQNNYLNGLKLQGNFYND--- 100
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGG-GGGGSSISIRGFG--SNRVLVLVDGVPLNSGGGGSvdl 77
|
90 100
....*....|....*....|....*....
gi 4389208 101 AVIDPY*LERAEI*RGPVSVLYGKSSPGG 129
Cdd:pfam07715 78 NSIDPEDIERVEVLKGPASALYGSGAIGG 106
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
17-280 |
9.51e-19 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 86.85 E-value: 9.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFaaeGQSQNNYL-NGLKL-- 93
Cdd:COG4206 4 TATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAASISIRGL---GSNQTLVLiDGVPLnd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 94 -QGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVY 172
Cdd:COG4206 81 pSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAGKFSYS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 173 ---SYRLTGLARSANAQQKGSEEQRYAIAPA-FTWRPDDKTNFTFlSYFQNEPETGYYGWLPKEGTVEPLPNGKRLPTDF 248
Cdd:COG4206 161 lsaSYRRSDGYRYNDPDLRNNDGYENTSLNArLGYKLGDNGSLSL-SGGYSDSERGYPGAVGSDRNLRLSLSLEYKLSDG 239
|
250 260 270
....*....|....*....|....*....|..
gi 4389208 249 NEGAKNNTYSRNEK*VGYSFDHEFNDTFTVRQ 280
Cdd:COG4206 240 WSLLLLAYYYYDRDYEDGGGDSAGTSNTDGAR 271
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
15-705 |
3.60e-17 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 85.69 E-value: 3.60e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 15 SATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTydHLIIRGFAAEGQSQNNYLNGLKLQ 94
Cdd:PRK10003 65 TSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRA--LYYSRGFQIDNYMVDGIPTYFESR 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 95 GNFyNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLK-EVQFKAGTDSLFQTGFDFSDSLDDDGVYS 173
Cdd:PRK10003 143 WNL-GDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKgDVSAEYGSWNKQRYVADLQSPLTEDGKVR 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 174 YRLTglarsANAQQKGSEEQRYAIAPAFTWR--PDDKTNFTFLS----YFQNEPETGYYGWLPKEGTveplpNGKRlpTD 247
Cdd:PRK10003 222 ARIV-----AGYQNNDSWLDRYNSEKTFFSGivDADLGDLTTLSagyeYQRIDVNSPTWGGLPRWNT-----DGSS--NS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 248 FNEG---AKNNTYSRNE-K*VGYSFDHEFNDTFTVRQNLRFAENKTSQNSVYgygvcsdpANAY-SKQCAALAPADKGHY 322
Cdd:PRK10003 290 YDRArstAPDWAYNDKEiNKVFMTLKQRFADTWQATLNATHSEVEFDSKMMY--------VDAYvDKATGMLVGPYSNYG 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 323 LARKYV----VDDEKLQNFSVDTQLQSKFATGDIDHTLLTGVDF*R*RNDinawfgyddsvpllnlYNPSHHHHHHGSVN 398
Cdd:PRK10003 362 PGFDYVggtgWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNR----------------YFSSWANIFPDEIG 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 399 TDFDFNAKDPANS-GPYRIL--NKQKQTGVYVQDQAQW-DKVLVTLGGRY-DWadqeslnRVAGTTDKRDDKQFTWRGGV 473
Cdd:PRK10003 426 SFYNFNGNFPQTDwSPQSLAqdDTTHMKSLYAATRVSLaDPLHLILGARYtNW-------RVDTLTYSMEKNHTTPYAGL 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 474 NYLFDNGVTPYFSYSESFEPSSQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNnl*ADPEGSFFSVEG 553
Cdd:PRK10003 499 VYDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDN--VAQSTGTPIPGSN 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 554 GE--------IRARGVEIEAKAALSASVNVvgsyTYTDAEYTTDTTYKGNTPAQVPKH*ASLWADYTFFDGPlsGLTLGT 625
Cdd:PRK10003 577 GEtaykavdgTVSKGVEFELNGAITDNWQL----TFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLPVMP--ELTVGG 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 626 GGRYTGSSYGD---PANSFKV--GSYTVVDALVRYDLARvg*agsNVAL--HVNNLFDREYvASCFNTYGCFwGAERQVV 698
Cdd:PRK10003 651 GVNWQNRVYTDtvtPYGTFRAeqGSYALVDLFTRYQVTK------NFSVqgNVNNLFDKTY-DTNVEGSIVY-GAPRNFS 722
|
....*..
gi 4389208 699 ATATFRF 705
Cdd:PRK10003 723 ITATYQF 729
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
25-678 |
1.20e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 80.59 E-value: 1.20e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 25 IQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVgtRGASNTYDhLIIRGFAA-------EGQSQNNYLNGLKLQGNF 97
Cdd:PRK13483 47 IRDAPASISVITREDLENRFYRDLTDALLDVPGVVV--TGGGDRTD-ISLRGMGSqytlilvDGKRQSSRETRPNSDGPG 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 98 YNDAVIDPY*-LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSLFQTGFDFSDSLDDDGVYSYRL 176
Cdd:PRK13483 124 VEQAWTPPLAaIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQENSDSGNVYQANFFVNGPLIKDL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 177 TGLARSANAQQKGSEEQRY--------AIAPAFTWRPDDKTNFTFLSYFQNEPETGYYGwlpkeGTVEPLPNGKRLPTDF 248
Cdd:PRK13483 204 LGLQLYGQYTQREEDDIEGgyrdkdarSLTAKLALTPNEDHDIMLEVGTSNQERDSTVG-----KTVAPLAPGESCGRRG 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 249 NEGAKNNTYSRNEk*vgYSFDHefndtftvrqnlrfaenktsqNSVYGYGVcsdpANAYSKQcaalapaDKGHYLARKYV 328
Cdd:PRK13483 279 CPESSTTEYERST----VSLSH---------------------TGRWDFGT----SDTYIQH-------EEFDNKSREMK 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 329 VDDeklqnfsvdTQLQSKFATG-DIDHTLLTGVDF*R*RNdinawfgyddsvpllnlynpshhhhhhgsvnTDFDFNAKd 407
Cdd:PRK13483 323 IKN---------TDFQSSLVAPlGQEHTLTFGAAYNHQDL-------------------------------TDETSNQI- 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 408 panSGPYRILNKQkqTGVYVQDQaqW---DKVLVTLGGRYDwaDQESLN-----RVAGTTDKRDdkQFTWRGGVNYLFDn 479
Cdd:PRK13483 362 ---SDLTDISRTQ--WAVFSEDE--WriaDDFALTGGLRLD--HDENFGghvspRVYGVWNLAP--SWTVKGGVSTGFR- 429
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 480 gvTPyfSYSESFEPSSQVGKDGNIF-----APSKGKQYEVGVKYVPEDRPIVVTGAVYN-----LTKT-----------N 538
Cdd:PRK13483 430 --AP--SLRQTTPDWGQVSRGGNIYgnpdlKPETSLNKELGLYYDLGSGLTASLTVFYNefkdkITRVacpatqctdgpN 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 539 NL*ADPEgsfFSVEGGEIRARGVEIEAKAALSASVNVVGSYTYTDAEYTTDtTYKGNTPAQVPKH*ASLWADYTFFDGPL 618
Cdd:PRK13483 506 QFGADPT---TYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDSEQKSG-AYKGSPLNQLPKHLFQASLNWEPTDRLN 581
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4389208 619 SGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVRYDLARvg*agsNVALH--VNNLFDRE 678
Cdd:PRK13483 582 SWARVNYRGEESQPTTGPSSSSFIAPSYTFLDLGANYQLTD------NLKLSagIYNLFDKE 637
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
7-679 |
4.57e-14 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 75.67 E-value: 4.57e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 7 AATIAARQSATGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGfaAEGQSQNN 86
Cdd:TIGR01779 24 EAQPLDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLPGVSIAQNGGRGQNTSLFLRG--TESDHVLV 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 87 YLNGLKLQ-----GNFYNDAVIDpy*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEPLKEVQFKAGTDSlFQTGfd 161
Cdd:TIGR01779 102 LIDGIRFGsaaagAADFQQLPVE--LVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLD-YQEY-- 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 162 fsdsldddgvysyrltglarSANAQQKGSEEQRYAIApaftwrpddktnftfLSYFQNEpetGYYGWLPKEGTVEPLPNG 241
Cdd:TIGR01779 177 --------------------SIASGVAIGENGWYSVA---------------LGTESTK---GINVRPGGPGVYDPDRDG 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 242 KRlptdfnegaKNNTYSRNEk*vgysfdHEFNDTFTVRQNLRFAENKtsqnsvygygvcsdpaNAYSKQcaalAPADKGH 321
Cdd:TIGR01779 219 FR---------SDSLLLGGG--------HRFDESWSLFVNALRYENR----------------NDYDNY----SFGTRLY 261
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 322 YLARKYVvddeklQNFSVDTQLQSKFatgdiDHTLLT-GVDF*R*RNDINAWFGYDDSVPLLNLYNPS-HHHHHHGSVNT 399
Cdd:TIGR01779 262 KEAEKGD------QSFTGGRQRQSER-----DVSELTlSTGKSKDWDYAYSKGRYSSTSDTREQRNIQwQNDLLVGDGWV 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 400 ---DFDFNAKDPANSGPYRILNkQKQTGVYVQDQAQWdkvlvtlgGRYDWadQESLNRvagttdkRDDKQF----TWRGG 472
Cdd:TIGR01779 331 lagGVDWQKDSIISSTADKEDD-RSNTAAFAQVLQQW--------GQQLL--EASLRR-------DDNQQFgshtTGSIA 392
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 473 VNYLFDNGVTPYFSYSESFEPSS---QVGKD-GNI-FAPSKGKQYEVGVKYVPEDRPIVVTGAVYNLTKTNNL*ADPEGS 547
Cdd:TIGR01779 393 WGYQFIEELRFTASYGTAFKAPNlnqLYYPSyGNPnLQPETSKSAELGFYGLFSGGKWSISGYRTKINDLIDYDSHPKGY 472
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 548 FFSVegGEIRARGVEIEAKAALsASVNVVGSYTYTDAEYTTDttykGNTPAQVPKH*ASLWADYTFFDgplsgLTLGTGG 627
Cdd:TIGR01779 473 PNNI--GEARIKGVEATAEFAT-GGWTHQLSVDLLDAQNVNT----GNTLPRRARQMYKWNADRAFEQ-----FDWGASY 540
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 4389208 628 RYTGSSYGDPANSF-----KVGSYTVVDALVRYDLarvg*AGSNVALHVNNLFDREY 679
Cdd:TIGR01779 541 QYVGKRYDDDYNTYptqnvRLGGYSLLDLRVSYYV----TDSWTVQGRIANLFDKDY 593
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
7-213 |
1.48e-10 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 64.40 E-value: 1.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 7 AATIAARQSATGTKTDT----------PIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVgTRGASNTydHLIIRG 76
Cdd:PRK13513 21 SQAYAAEKTNTATPTDTmvvtasgfqqRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVV-TGGGSTS--DISIRG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 77 FAAE--------------GQSQNNYLNGLKlQGNFYNDAVIdpy*lERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTEP 142
Cdd:PRK13513 98 MAAKytlilvdgkrvdtrSTRPNSDGSGIE-QGWLPPLAAI-----ERIEVVRGPMSSLYGSDAMGGVINIITRKVQKEW 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 143 LKEVQ----FKAGTDS--LFQTgFDFSDSLDDDGVYSYRLTGL--ARSANAQQKGSEEQRYAIAPA-FTWRPDDKTNFTF 213
Cdd:PRK13513 172 HGSLRadatLQEDSKSgdIFQT-NAYASGPLIDGLLGLKVSGLlsHRSEDKIIDGYNEQRMRNGTAtFSLTPDDNNEFDF 250
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
17-137 |
1.07e-06 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 52.19 E-value: 1.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVS----------VGTRGASNTYDHLIIRGfaaegqSQNN 86
Cdd:PRK10064 36 TASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQltnegdnrkgVSIRGLDSSYTLILIDG------KRVN 109
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 4389208 87 YLNGLkLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKR 137
Cdd:PRK10064 110 SRNAV-FRHNDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKK 159
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
7-141 |
2.91e-06 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 50.78 E-value: 2.91e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 7 AATIAARQSATGTKTDTPI----------QKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVgtRGASNTYDhLIIRG 76
Cdd:PRK13484 16 SAVISSGYASSDKKEDTLVvtasgftqqlRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGISI--TGGNEKPD-ISIRG 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 4389208 77 FAAE-------GQSQNNYLNGLKLQGNFYNDAVIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPTTE 141
Cdd:PRK13484 93 LSGDytlilvdGRRQSGRESRPNGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQ 164
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
17-139 |
8.32e-06 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 49.25 E-value: 8.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 17 TGTKTDTPIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSV--GT----------RGASNTYDHLIIRGfAAEGQSQ 84
Cdd:PRK13486 31 SASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGVDVesGTgktggleisiRGMPASYTLILIDG-VRQGGSS 109
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 4389208 85 NNYLNGLKLQgnfyNDAVIDPY*-LERAEI*RGPVSVLYGKSSPGGLLN*VSKRPT 139
Cdd:PRK13486 110 DVTPNGFSAM----NTGFMPPLAaIERIEVIRGPMSTLYGSDAMGGVVNIITRKNA 161
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
5-139 |
3.14e-04 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 43.98 E-value: 3.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 5 GPAATIAARQSATGTKTDTPI------QKVPQS--ISVVTAEE*ALHQP-KSVKEALSYTPGV------SVGTRGASNTY 69
Cdd:PRK13528 18 GLNSPVSAAESSDDDNGETMVveataeQELKQQpgVSIITAEDIKKRPPvNDLSDIIRKMPGVnltgnsASGTRGNNRQI 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 70 DhliIRGFAAEG----------QSQNNYLNGLKLQGNFYNDA-VIDPY*LERAEI*RGPVSVLYGKSSPGGLLN*VSKRP 138
Cdd:PRK13528 98 D---IRGMGPENtlilidgvpvTSRNSVRYSWRGERDTRGDTnWVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRP 174
|
.
gi 4389208 139 T 139
Cdd:PRK13528 175 T 175
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
539-678 |
1.17e-03 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 42.18 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 539 NL*ADPEGSFFSVEggEIRARGVEIEAKAALSASVNVVGSYTYTDAEyttDTTYKGNTP-AQVPKH*ASLWADYTffDGP 617
Cdd:PRK10064 511 RGRRVPVFRYYNVN--KARIQGVETELKIPFNDEWKLSLNYTYNDGR---DVSNGENKPlSDLPFHTANGTLDWK--PLA 583
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 4389208 618 LSGLTLGTGGRYTGSSYGDPANSFKVGSYTVvdalvrYDLARVG*AGSNVALH--VNNLFDRE 678
Cdd:PRK10064 584 LEDWSFYVSGNYTGQKRADSATAKTPGGYTI------WNTGAAWQVTKDVKLRagVLNLGDKD 640
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
24-137 |
9.35e-03 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 39.21 E-value: 9.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4389208 24 PIQKVPQSISVVTAEE*ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAegqSQNNYL-NGLKL-QGNFYNDA 101
Cdd:PRK10641 38 PVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSLFIRGTNS---SHVLVLiDGVRLnQAGISGSA 114
|
90 100 110
....*....|....*....|....*....|....*....
gi 4389208 102 VID--PY*L-ERAEI*RGPVSVLYGKSSPGGLLN*VSKR 137
Cdd:PRK10641 115 DLSqiPISLvQRIEYIRGPRSAVYGSDAIGGVVNIITTR 153
|
|
| |
