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Conserved domains on  [gi|441068221|gb|AGC27500|]
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LRR-7030, partial [Anopheles gambiae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR super family cl34836
Leucine-rich repeat (LRR) protein [Transcription];
69-146 4.71e-03

Leucine-rich repeat (LRR) protein [Transcription];


The actual alignment was detected with superfamily member COG4886:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 36.45  E-value: 4.71e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 441068221  69 RLKVSRTYLSDI-AFVAGNGRLNFLTITESRLKTIPSTIVHLVALETVAITKSPIETVNLCLfSKLTRLYELNLCNNKI 146
Cdd:COG4886  163 SLDLSNNQLTDLpEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQL 240
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
69-146 4.71e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 36.45  E-value: 4.71e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 441068221  69 RLKVSRTYLSDI-AFVAGNGRLNFLTITESRLKTIPSTIVHLVALETVAITKSPIETVNLCLfSKLTRLYELNLCNNKI 146
Cdd:COG4886  163 SLDLSNNQLTDLpEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQL 240
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
69-146 4.71e-03

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 36.45  E-value: 4.71e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 441068221  69 RLKVSRTYLSDI-AFVAGNGRLNFLTITESRLKTIPSTIVHLVALETVAITKSPIETVNLCLfSKLTRLYELNLCNNKI 146
Cdd:COG4886  163 SLDLSNNQLTDLpEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPL-ANLTNLETLDLSNNQL 240
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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