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Conserved domains on  [gi|442570050|sp|Q1DS65|]
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RecName: Full=Protein STU1

Protein Classification

CLASP family protein( domain architecture ID 10574616)

CLASP family protein similar to protein STU1 (suppressor of tubulin 1), a microtubule binding protein that promotes the stabilization of dynamic microtubules

Gene Ontology:  GO:0008017|GO:0000226
PubMed:  32332092

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
337-563 1.86e-121

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


:

Pssm-ID: 432496  Cd Length: 227  Bit Score: 374.62  E-value: 1.86e-121
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   337 FDDTIREMLPHFEGKESEQNWILREKSIMTLRRLTKGNAPHDYQQYYLAGIKSVLDGILKTANSLRTTLSAAGCYLLQDI 416
Cdd:pfam12348    1 LDDKFRELLPAFEGKETELNWDAREKNITKLRSLIKGNAPEDFPPEFFEGLKSLLDGILKAVLSLRTTLSSTGCHLLKEL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   417 ARTCGPAIDPMVEILLQSLIKLSAALKKITAQNGNVTVDVIIGNVSYTARILQHIWGACQDKNVQPRQFATGWIKTIIIR 496
Cdd:pfam12348   81 AIQLGHHIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRILQHISAASQDKNVQPREYSAIWLKILLRR 160
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442570050   497 QGKHKGSIEHSGGLDLIEKCIKKGLGDPNPGVREGMRGTFWAFYSVWPERADVIMSALEPKSKNLLE 563
Cdd:pfam12348  161 HGHHKSHIEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLLSTLDPNVRKALE 227
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
1-216 4.32e-66

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


:

Pssm-ID: 432496  Cd Length: 227  Bit Score: 222.85  E-value: 4.32e-66
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050     1 MDARATELLATL--RNGNVSVDVKTTSLAKLKSEIKQKhVPDAAISPLFESFR---LAIASQHYSLSSAGFSALGHLLKR 75
Cdd:pfam12348    1 LDDKFRELLPAFegKETELNWDAREKNITKLRSLIKGN-APEDFPPEFFEGLKsllDGILKAVLSLRTTLSSTGCHLLKE 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050    76 LTLQEQHeAIALQGRATYQLLLERLGDHKERIRSQAAQAFTDFWPAASADVE-HHVLGAALIGKNARAKETSMVWLAKMT 154
Cdd:pfam12348   80 LAIQLGH-HIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRiLQHISAASQDKNVQPREYSAIWLKILL 158
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 442570050   155 R---------EYGLLFRIYVPALVTCLEDADGVVRDTAKSTVIELFQSAPPRAISDLkkQLIQNNVRKSIA 216
Cdd:pfam12348  159 RrhghhkshiEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLL--STLDPNVRKALE 227
PHA03247 super family cl33720
large tegument protein UL36; Provisional
612-999 8.55e-08

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 8.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  612 PSRPESAQSSFPDPKSGRPAPRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQ 691
Cdd:PHA03247 2613 PPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTV 2692
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  692 SKASSPSDSPQKsksklmttPRSRNPLARPKSRMDNAANVTNDKQRADPAATLAPkmrrrGPSEPDVVSAAARARIAILS 771
Cdd:PHA03247 2693 GSLTSLADPPPP--------PPTPEPAPHALVSATPLPPGPAAARQASPALPAAP-----APPAVPAGPATPGGPARPAR 2759
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  772 PSRTEGDFSVASSQVKID--QKAEEAFQGTPTRGIENGTPLPASPLRSPLKGAFSTPTRNRKSSDgAPPSRIPISPSYSS 849
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAgpPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASP-AGPLPPPTSAQPTA 2838
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  850 RRSSEEPMLPRTPL--------DSRRsRGESDEAASQIPAPvdqsPIIDAINSQSPGIlkvyedPQSPHSKHSIVLGDTV 921
Cdd:PHA03247 2839 PPPPPGPPPPSLPLggsvapggDVRR-RPPSRSPAAKPAAP----ARPPVRRLARPAV------SRSTESFALPPDQPER 2907
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  922 PKTPGSQAKVMPLEELPLNESTTVPNRkhnQLPEHTPLLQPSPILTPSSENSHRRWKKVEGS--------ERRRSLSPRS 993
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPP---PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlvpgrvavPRFRVPQPAP 2984

                  ....*.
gi 442570050  994 KDPVKA 999
Cdd:PHA03247 2985 SREAPA 2990
 
Name Accession Description Interval E-value
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
337-563 1.86e-121

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


Pssm-ID: 432496  Cd Length: 227  Bit Score: 374.62  E-value: 1.86e-121
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   337 FDDTIREMLPHFEGKESEQNWILREKSIMTLRRLTKGNAPHDYQQYYLAGIKSVLDGILKTANSLRTTLSAAGCYLLQDI 416
Cdd:pfam12348    1 LDDKFRELLPAFEGKETELNWDAREKNITKLRSLIKGNAPEDFPPEFFEGLKSLLDGILKAVLSLRTTLSSTGCHLLKEL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   417 ARTCGPAIDPMVEILLQSLIKLSAALKKITAQNGNVTVDVIIGNVSYTARILQHIWGACQDKNVQPRQFATGWIKTIIIR 496
Cdd:pfam12348   81 AIQLGHHIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRILQHISAASQDKNVQPREYSAIWLKILLRR 160
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442570050   497 QGKHKGSIEHSGGLDLIEKCIKKGLGDPNPGVREGMRGTFWAFYSVWPERADVIMSALEPKSKNLLE 563
Cdd:pfam12348  161 HGHHKSHIEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLLSTLDPNVRKALE 227
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
1-216 4.32e-66

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


Pssm-ID: 432496  Cd Length: 227  Bit Score: 222.85  E-value: 4.32e-66
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050     1 MDARATELLATL--RNGNVSVDVKTTSLAKLKSEIKQKhVPDAAISPLFESFR---LAIASQHYSLSSAGFSALGHLLKR 75
Cdd:pfam12348    1 LDDKFRELLPAFegKETELNWDAREKNITKLRSLIKGN-APEDFPPEFFEGLKsllDGILKAVLSLRTTLSSTGCHLLKE 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050    76 LTLQEQHeAIALQGRATYQLLLERLGDHKERIRSQAAQAFTDFWPAASADVE-HHVLGAALIGKNARAKETSMVWLAKMT 154
Cdd:pfam12348   80 LAIQLGH-HIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRiLQHISAASQDKNVQPREYSAIWLKILL 158
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 442570050   155 R---------EYGLLFRIYVPALVTCLEDADGVVRDTAKSTVIELFQSAPPRAISDLkkQLIQNNVRKSIA 216
Cdd:pfam12348  159 RrhghhkshiEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLL--STLDPNVRKALE 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
612-999 8.55e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 8.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  612 PSRPESAQSSFPDPKSGRPAPRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQ 691
Cdd:PHA03247 2613 PPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTV 2692
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  692 SKASSPSDSPQKsksklmttPRSRNPLARPKSRMDNAANVTNDKQRADPAATLAPkmrrrGPSEPDVVSAAARARIAILS 771
Cdd:PHA03247 2693 GSLTSLADPPPP--------PPTPEPAPHALVSATPLPPGPAAARQASPALPAAP-----APPAVPAGPATPGGPARPAR 2759
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  772 PSRTEGDFSVASSQVKID--QKAEEAFQGTPTRGIENGTPLPASPLRSPLKGAFSTPTRNRKSSDgAPPSRIPISPSYSS 849
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAgpPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASP-AGPLPPPTSAQPTA 2838
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  850 RRSSEEPMLPRTPL--------DSRRsRGESDEAASQIPAPvdqsPIIDAINSQSPGIlkvyedPQSPHSKHSIVLGDTV 921
Cdd:PHA03247 2839 PPPPPGPPPPSLPLggsvapggDVRR-RPPSRSPAAKPAAP----ARPPVRRLARPAV------SRSTESFALPPDQPER 2907
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  922 PKTPGSQAKVMPLEELPLNESTTVPNRkhnQLPEHTPLLQPSPILTPSSENSHRRWKKVEGS--------ERRRSLSPRS 993
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPP---PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlvpgrvavPRFRVPQPAP 2984

                  ....*.
gi 442570050  994 KDPVKA 999
Cdd:PHA03247 2985 SREAPA 2990
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
666-966 5.09e-05

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 47.26  E-value: 5.09e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   666 PRRPELVRPAT----ADPYSSRRSAAPTAQSKASSPSDSPQKSK---SKLMTTPRSRNPLArPKSRMDNAANVTNDKQRA 738
Cdd:pfam17823   92 PHGTDLSEPATregaADGAASRALAAAASSSPSSAAQSLPAAIAalpSEAFSAPRAAACRA-NASAAPRAAIAAASAPHA 170
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   739 DPAATLAPKMRRRGPSEPDVVSAAARARIAILSPSRTEGDFSVASSQVKIDQKAEEAFQGTPTRGIENGTPLPASPLRSP 818
Cdd:pfam17823  171 ASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTP 250
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   819 LK-GAFSTPTRNRKSSDGAPPSRIPISPSYSSRRSSEEPMLPRTPLDSrrSRGESDEAASQIpaPVDQsPIIDAINSQSP 897
Cdd:pfam17823  251 AAlATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAP--MGAQAQGPIIQV--STDQ-PVHNTAGEPTP 325
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 442570050   898 GILKVYEDPQSPHSKHSIVLgdTVPKTPGSQAKVMPLEELPLNESTTVPnrkhnQLPEHTPLLQPSPIL 966
Cdd:pfam17823  326 SPSNTTLEPNTPKSVASTNL--AVVTTTKAQAKEPSASPVPVLHTSMIP-----EVEATSPTTQPSPLL 387
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
624-759 1.10e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 42.83  E-value: 1.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  624 DPKSGRPAPRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASR-------------PRRPELVRPATADPYSSRRSAAPTA 690
Cdd:NF040712  189 DPDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDsdpaeagtpddlaSARRRRAGVEQPEDEPVGPGAAPAA 268
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442570050  691 QSKASSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAANVTNDKQRADPAATLAPKMRRRGPSEP---DVV 759
Cdd:NF040712  269 EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPswdDVL 340
 
Name Accession Description Interval E-value
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
337-563 1.86e-121

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


Pssm-ID: 432496  Cd Length: 227  Bit Score: 374.62  E-value: 1.86e-121
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   337 FDDTIREMLPHFEGKESEQNWILREKSIMTLRRLTKGNAPHDYQQYYLAGIKSVLDGILKTANSLRTTLSAAGCYLLQDI 416
Cdd:pfam12348    1 LDDKFRELLPAFEGKETELNWDAREKNITKLRSLIKGNAPEDFPPEFFEGLKSLLDGILKAVLSLRTTLSSTGCHLLKEL 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   417 ARTCGPAIDPMVEILLQSLIKLSAALKKITAQNGNVTVDVIIGNVSYTARILQHIWGACQDKNVQPRQFATGWIKTIIIR 496
Cdd:pfam12348   81 AIQLGHHIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRILQHISAASQDKNVQPREYSAIWLKILLRR 160
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 442570050   497 QGKHKGSIEHSGGLDLIEKCIKKGLGDPNPGVREGMRGTFWAFYSVWPERADVIMSALEPKSKNLLE 563
Cdd:pfam12348  161 HGHHKSHIEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLLSTLDPNVRKALE 227
CLASP_N pfam12348
CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). ...
1-216 4.32e-66

CLASP N terminal; This region is found at the N terminal of CLIP-associated proteins (CLASPs). CLASPs are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules. In yeast, Drosophila, and Xenopus, a single CLASP orthologue is present. In mammals, a second paralogue (CLASP2) exists which has some functional overlap with CLASP1.


Pssm-ID: 432496  Cd Length: 227  Bit Score: 222.85  E-value: 4.32e-66
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050     1 MDARATELLATL--RNGNVSVDVKTTSLAKLKSEIKQKhVPDAAISPLFESFR---LAIASQHYSLSSAGFSALGHLLKR 75
Cdd:pfam12348    1 LDDKFRELLPAFegKETELNWDAREKNITKLRSLIKGN-APEDFPPEFFEGLKsllDGILKAVLSLRTTLSSTGCHLLKE 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050    76 LTLQEQHeAIALQGRATYQLLLERLGDHKERIRSQAAQAFTDFWPAASADVE-HHVLGAALIGKNARAKETSMVWLAKMT 154
Cdd:pfam12348   80 LAIQLGH-HIDPMAEILLPTLLKLCGDTKKITSQNANQAVAAILSNASYTPRiLQHISAASQDKNVQPREYSAIWLKILL 158
                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 442570050   155 R---------EYGLLFRIYVPALVTCLEDADGVVRDTAKSTVIELFQSAPPRAISDLkkQLIQNNVRKSIA 216
Cdd:pfam12348  159 RrhghhkshiEHSGGLRLIEKSLKKGLEDANPGVRETARSTFWEFFKVWPSRAKSLL--STLDPNVRKALE 227
PHA03247 PHA03247
large tegument protein UL36; Provisional
612-999 8.55e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 8.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  612 PSRPESAQSSFPDPKSGRPAPRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQ 691
Cdd:PHA03247 2613 PPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTV 2692
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  692 SKASSPSDSPQKsksklmttPRSRNPLARPKSRMDNAANVTNDKQRADPAATLAPkmrrrGPSEPDVVSAAARARIAILS 771
Cdd:PHA03247 2693 GSLTSLADPPPP--------PPTPEPAPHALVSATPLPPGPAAARQASPALPAAP-----APPAVPAGPATPGGPARPAR 2759
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  772 PSRTEGDFSVASSQVKID--QKAEEAFQGTPTRGIENGTPLPASPLRSPLKGAFSTPTRNRKSSDgAPPSRIPISPSYSS 849
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAgpPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASP-AGPLPPPTSAQPTA 2838
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  850 RRSSEEPMLPRTPL--------DSRRsRGESDEAASQIPAPvdqsPIIDAINSQSPGIlkvyedPQSPHSKHSIVLGDTV 921
Cdd:PHA03247 2839 PPPPPGPPPPSLPLggsvapggDVRR-RPPSRSPAAKPAAP----ARPPVRRLARPAV------SRSTESFALPPDQPER 2907
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  922 PKTPGSQAKVMPLEELPLNESTTVPNRkhnQLPEHTPLLQPSPILTPSSENSHRRWKKVEGS--------ERRRSLSPRS 993
Cdd:PHA03247 2908 PPQPQAPPPPQPQPQPPPPPQPQPPPP---PPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlvpgrvavPRFRVPQPAP 2984

                  ....*.
gi 442570050  994 KDPVKA 999
Cdd:PHA03247 2985 SREAPA 2990
PHA03247 PHA03247
large tegument protein UL36; Provisional
605-968 1.93e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 52.63  E-value: 1.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  605 LAASSNVPSRPESAQSSFPDPKSGRPA-------PRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASRPRRPelvrpata 677
Cdd:PHA03247 2555 LPPAAPPAAPDRSVPPPRPAPRPSEPAvtsrarrPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-------- 2626
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  678 dPYSSRRSAAPTAQSKASSPSDSPqksksklmttPRSRNPLARPKSRMDNAAnvtndKQRADPAATLAPKMRRRGPSEPD 757
Cdd:PHA03247 2627 -PPPSPSPAANEPDPHPPPTVPPP----------ERPRDDPAPGRVSRPRRA-----RRLGRAAQASSPPQRPRRRAARP 2690
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  758 VVSAAARARIAILSPSRTEGDFSVASSQVKIDQKAEEAFQGTP-------TRGIENGTPLPASPLRSPLKGAFSTPTRNR 830
Cdd:PHA03247 2691 TVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPalpaapaPPAVPAGPATPGGPARPARPPTTAGPPAPA 2770
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  831 KSSD--GAPPSRIPISPSYSSRRSSEEPMLPRTPLD--SRRSRGESDEAASQIPAPVDQSPiidainsqsPGILKVYEDP 906
Cdd:PHA03247 2771 PPAApaAGPPRRLTRPAVASLSESRESLPSPWDPADppAAVLAPAAALPPAASPAGPLPPP---------TSAQPTAPPP 2841
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442570050  907 QSPHSKHSIVLGDTVpkTPGSQAKVMPLEELPLNESTTVPNRKHNQLPEHTPLLQPSPILTP 968
Cdd:PHA03247 2842 PPGPPPPSLPLGGSV--APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALP 2901
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
572-973 4.48e-06

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 51.23  E-value: 4.48e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  572 GVASQSFDGSRGSQPHSTKSSLKEAINA-QKKARLAASSNVPSRPESAQSS----FPDPKSGRPAPRRPTGTSTIRVPTG 646
Cdd:PTZ00449  547 GKPGETKEGEVGKKPGPAKEHKPSKIPTlSKKPEFPKDPKHPKDPEEPKKPkrprSAQRPTRPKSPKLPELLDIPKSPKR 626
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  647 EKLSQSASLSSAPMRPASrPRRPELVR-PATAD-PYSSRRSAAPTAQSK-ASSPSDSPQKSKSKLMTTPRSRNPLARPKS 723
Cdd:PTZ00449  627 PESPKSPKRPPPPQRPSS-PERPEGPKiIKSPKpPKSPKPPFDPKFKEKfYDDYLDAAAKSKETKTTVVLDESFESILKE 705
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  724 RMDNAANVTNDKQRA-------DPAATLAPkmrrrgPSEPDvvSAAARARIAILSPSRTEGDFSVASSQVKIDQKAEEAF 796
Cdd:PTZ00449  706 TLPETPGTPFTTPRPlppklprDEEFPFEP------IGDPD--AEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEF 777
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  797 QgtpTRGIENGTPLPASPLRSPlkgafSTPTRNRKSSDGAPPSrIPIspsysSRRSSEEPMLPRTPLDSRRSRGESDeaA 876
Cdd:PTZ00449  778 K---EEDIHAETGEPDEAMKRP-----DSPSEHEDKPPGDHPS-LPK-----KRHRLDGLALSTTDLESDAGRIAKD--A 841
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  877 SQIPAPVDQSPIIDAINSqspgilkVYEDPQSPHSKHSIVLGDTvpKTPGSQAKVMPLEElplNESTTVPNRKHNQLPEH 956
Cdd:PTZ00449  842 SGKIVKLKRSKSFDDLTT-------VEEAEEMGAEARKIVVDDD--GTEADDEDTHPPEE---KHKSEVRRRRPPKKPSK 909
                         410
                  ....*....|....*..
gi 442570050  957 TPllQPSPILTPSSENS 973
Cdd:PTZ00449  910 PK--KPSKPKKPKKPDS 924
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
582-883 1.00e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 50.17  E-value: 1.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  582 RGSQPHSTKSSLKEAINAQKKARLAASSNVPSRPESAQSSFPDPKSGRPAPRR-----PTGTSTIRVPTGEKLSQSASLS 656
Cdd:PHA03307  119 PTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQaalplSSPEETARAPSSPPAEPPPSTP 198
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  657 SAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQSKA--SSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAANVTND 734
Cdd:PHA03307  199 PAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSsdSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  735 KQRADPAATLAPKMRRRGPSEPDV----VSAAARARIAILSPSRTEGDFSVASSQVKIDQKAeeafqgtptrgiengTPL 810
Cdd:PHA03307  279 SSRPGPASSSSSPRERSPSPSPSSpgsgPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAA---------------VSP 343
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 442570050  811 PASPLRSPLKGAFSTPTRNRKSSDGAPPSRIPISPSYSSRrsseEPMLPRT---PLDSRRSRGESDEAASQIPAPV 883
Cdd:PHA03307  344 GPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG----RPTRRRAraaVAGRARRRDATGRFPAGRPRPS 415
PHA03247 PHA03247
large tegument protein UL36; Provisional
586-970 4.97e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.01  E-value: 4.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  586 PHSTKSSLKEAINAQKKARLAASSNVPSRPESAqssfPDPKSG-------RPAPRRPTGTSTIRVPTGEklsqsaslssa 658
Cdd:PHA03247 2463 PFSLSLLLGELFPGAPVYRRPAEARFPFAAGAA----PDPGGGgppdpdaPPAPSRLAPAILPDEPVGE----------- 2527
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  659 pmrpASRPRR-------PELVRPATADPYSSRRSAAPTAQSKASSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAANV 731
Cdd:PHA03247 2528 ----PVHPRMltwirglEELASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVD 2603
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  732 TNDKQRADPAATLAPKMRRR---GPSEPDVVSAAARARIAILSPSRTEGDFSVASSQVKIDQKAEEafQGTPTRgiengt 808
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHApdpPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARR--LGRAAQ------ 2675
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  809 plPASPLRSPLKGAFSTPTRNRKSS-DGAPPSRIPispsyssrRSSEEPMLPRTPLDSrrsrGESDEAASQIPAPVDQSP 887
Cdd:PHA03247 2676 --ASSPPQRPRRRAARPTVGSLTSLaDPPPPPPTP--------EPAPHALVSATPLPP----GPAAARQASPALPAAPAP 2741
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  888 IIDAINSQSPGILKVYEDPQSPHSKHSivlgDTVPKTP--GSQAKVMPLEELPLNESTTVPNRKHNQLPEHTPLLQPSPI 965
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPA----PAPPAAPaaGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAA 2817

                  ....*
gi 442570050  966 LTPSS 970
Cdd:PHA03247 2818 LPPAA 2822
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
666-966 5.09e-05

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 47.26  E-value: 5.09e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   666 PRRPELVRPAT----ADPYSSRRSAAPTAQSKASSPSDSPQKSK---SKLMTTPRSRNPLArPKSRMDNAANVTNDKQRA 738
Cdd:pfam17823   92 PHGTDLSEPATregaADGAASRALAAAASSSPSSAAQSLPAAIAalpSEAFSAPRAAACRA-NASAAPRAAIAAASAPHA 170
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   739 DPAATLAPKMRRRGPSEPDVVSAAARARIAILSPSRTEGDFSVASSQVKIDQKAEEAFQGTPTRGIENGTPLPASPLRSP 818
Cdd:pfam17823  171 ASPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTP 250
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   819 LK-GAFSTPTRNRKSSDGAPPSRIPISPSYSSRRSSEEPMLPRTPLDSrrSRGESDEAASQIpaPVDQsPIIDAINSQSP 897
Cdd:pfam17823  251 AAlATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMARNPAAP--MGAQAQGPIIQV--STDQ-PVHNTAGEPTP 325
                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 442570050   898 GILKVYEDPQSPHSKHSIVLgdTVPKTPGSQAKVMPLEELPLNESTTVPnrkhnQLPEHTPLLQPSPIL 966
Cdd:pfam17823  326 SPSNTTLEPNTPKSVASTNL--AVVTTTKAQAKEPSASPVPVLHTSMIP-----EVEATSPTTQPSPLL 387
PHA03247 PHA03247
large tegument protein UL36; Provisional
612-887 4.71e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 4.71e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  612 PSRPESAQSSFPDPKSGRPAPRRPTGTSTirvPTGEKLSQSASLSSAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQ 691
Cdd:PHA03247 2722 PPGPAAARQASPALPAAPAPPAVPAGPAT---PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  692 SKASSPSDSPQKSKSKLMTTPRSRNPlARPKSRMDNAANVTNDKQRADPAATLAP--------KMRRRGPSEPDVVSAAA 763
Cdd:PHA03247 2799 PSPWDPADPPAAVLAPAAALPPAASP-AGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvapggDVRRRPPSRSPAAKPAA 2877
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  764 RARIAILSPSRTEGDFSVASSQVKIDQKAEEAFQGTPTRgiengtPLPASPLRSPLKGAFSTPTRNRKSSDGAP-PSRIP 842
Cdd:PHA03247 2878 PARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPP------PQPQPQPPPPPQPQPPPPPPPRPQPPLAPtTDPAG 2951
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 442570050  843 ISPSYSSRRSSEEPMLPRTPLDSRRSRGESDEAASQIPAPVDQSP 887
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPL 2996
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
624-759 1.10e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 42.83  E-value: 1.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  624 DPKSGRPAPRRPTGTSTIRVPTGEKLSQSASLSSAPMRPASR-------------PRRPELVRPATADPYSSRRSAAPTA 690
Cdd:NF040712  189 DPDFGRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDsdpaeagtpddlaSARRRRAGVEQPEDEPVGPGAAPAA 268
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 442570050  691 QSKASSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAANVTNDKQRADPAATLAPKMRRRGPSEP---DVV 759
Cdd:NF040712  269 EPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRASVPswdDVL 340
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
615-993 1.92e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 42.60  E-value: 1.92e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   615 PESAQSSFPDPKSGRPAPRRPTG-TSTIRVPTGEKLsqsaslssapmrPASRPRRPELVRPATADPYSSRRSAAPTAQSk 693
Cdd:pfam05109  425 PESTTTSPTLNTTGFAAPNTTTGlPSSTHVPTNLTA------------PASTGPTVSTADVTSPTPAGTTSGASPVTPS- 491
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   694 aSSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAANVTNDKQRADP--------AATLAPKMRRRGPSePDVVSAAARA 765
Cdd:pfam05109  492 -PSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPtlgktsptSAVTTPTPNATSPT-PAVTTPTPNA 569
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   766 RIAIL---SPSRTEGDFSVASSQVKIDQKAEEAFQGTPTRGIENGTPLPASPLRSPlKGAFSTPTRNRKSSDGAPPSRIP 842
Cdd:pfam05109  570 TIPTLgktSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSSMSLRP 648
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050   843 ispsyssrRSSEEPMLPRTpldsrrsrgeSDEAASQIPAPVDQSPIidainsqspGILKVYEDPQSPHSKHSIVLGDTVP 922
Cdd:pfam05109  649 --------SSISETLSPST----------SDNSTSHMPLLTSAHPT---------GGENITQVTPASTSTHHVSTSSPAP 701
                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 442570050   923 KT--------PGSQAKVMPLEELPLNESTTVPNRKHNQLPEHTPLLQPSPILTPSSENSHRRWKKVEGSERRRSLSPRS 993
Cdd:pfam05109  702 RPgttsqasgPGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTT 780
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
571-814 1.96e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.47  E-value: 1.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  571 RGVASQSFDGSRGSQPHSTKSSLKEAINAQKKARLAASSNVPSRPESAQSSFPDPKSG----RPAPRRPTGTSTIRVPTG 646
Cdd:PHA03307  193 PPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGpeneCPLPRPAPITLPTRIWEA 272
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  647 EK-LSQSASLSSAPMRPASRPRRPELVRPATADPY---SSRRSAAPTAQSKASSPSDSPQKSKSKLMTTPRSRnPLARPK 722
Cdd:PHA03307  273 SGwNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPapsSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGP-SPSRSP 351
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  723 SRMDNAANVTNDKQRADPAATLAPKMRRRGPSEPDVVSAAARARIAIL---SPSRTEGdfSVASSQVKIDQKAEEAFQGT 799
Cdd:PHA03307  352 SPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARrrdATGRFPA--GRPRPSPLDAGAASGAFYAR 429
                         250
                  ....*....|....*
gi 442570050  800 PTRGIENGTPLPASP 814
Cdd:PHA03307  430 YPLLTPSGEPWPGSP 444
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
612-882 2.35e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 42.47  E-value: 2.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  612 PSRPESAQSSFPDPKSGRPAPRRPTGTSTiRVPTGEKLSQSASLSSAPMRPASRPRRPELVRPATADPYSSRRSAAPTAQ 691
Cdd:PHA03307  100 PAREGSPTPPGPSSPDPPPPTPPPASPPP-SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSS 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  692 SKASSPSDSPQKSKSKLMTTPRSRNPLARPKSRMDNAAnvtndkqrADPAATLAPKMRRRGPSEPDVVSAAARARIAILS 771
Cdd:PHA03307  179 PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISAS--------ASSPAPAPGRSAADDAGASSSDSSSSESSGCGWG 250
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  772 PSRTEGDFSVASSQVKIDQKAEEAFQGTPTR---GIENGTPLPASPLRSPLK-GAFSTPTRNRKSSDGAPPSRIPISPSY 847
Cdd:PHA03307  251 PENECPLPRPAPITLPTRIWEASGWNGPSSRpgpASSSSSPRERSPSPSPSSpGSGPAPSSPRASSSSSSSRESSSSSTS 330
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 442570050  848 SSRRSSEEPMLPRTPLDSRRSRGESDEAASQIPAP 882
Cdd:PHA03307  331 SSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSP 365
PHA03378 PHA03378
EBNA-3B; Provisional
580-756 8.80e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.44  E-value: 8.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  580 GSRGSQPHSTKSSLKEaiNAQKKARLAASSNVPSRPESAQSSFPDPKSGR---------PAPRRPTGTSTIRVP-----T 645
Cdd:PHA03378  602 PSQTPEPPTTQSHIPE--TSAPRQWPMPLRPIPMRPLRMQPITFNVLVFPtphqppqveITPYKPTWTQIGHIPyqpspT 679
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 442570050  646 GEKLSQSASLSSAPMRPAsrPRRPELVRPATADPYSSRRSAAPT--------AQSKASSPSDSPQKSKSKLMTTPRSRNP 717
Cdd:PHA03378  680 GANTMLPIQWAPGTMQPP--PRAPTPMRPPAAPPGRAQRPAAATgrarppaaAPGRARPPAAAPGRARPPAAAPGRARPP 757
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 442570050  718 LARPKSRMDNAANVTNDKQRADPAATLAPKMRRRGPSEP 756
Cdd:PHA03378  758 AAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGAPTP 796
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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