|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 799.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 1 MANIRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 81 NIHANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLT 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 241 SVALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 321 SQILFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALNWN 380
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
18-373 |
1.54e-134 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 389.92 E-value: 1.54e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 18 FIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLH 97
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 98 VARGMYYGSYlqKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNA 173
Cdd:COG1290 107 MFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 174 TLTRFFAFH-FLLPFVIAGASMIHLLFLHQTGSNNPTG----LNSDADKVTFHPYFSYKDLLGFILMLVGLTSVALFSPN 248
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 249 llGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQILFW 326
Cdd:COG1290 265 --NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 443908275 327 TLVADMLVLTWIGGQPVehPFVLIGQVASTVYFALFLIALPLTGLLE 373
Cdd:COG1290 343 AFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
5.14e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 284.65 E-value: 5.14e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 9 PLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 89 FFFICLYLHVARGMYYGSY--LQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 443908275 167 GFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
7.50e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 266.17 E-value: 7.50e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 18 FIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 98 VARGMYYG--SYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 443908275 176 TRFFAFHFLLPFVIAGASMIHLLFLHQTG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
229-339 |
7.61e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 62.89 E-value: 7.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 229 LLGFILMLVGLtsvALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLH 308
Cdd:TIGR01156 44 ILGTIACVVGL---AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 443908275 309 TSKQRGNTF-RPLSQILFwtlVADMLVLTWIG 339
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF---LFGTVVALWLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-380 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 799.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 1 MANIRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 81 NIHANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLT 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 241 SVALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPL 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 321 SQILFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALNWN 380
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
3-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 740.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 3 NIRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNI 82
Cdd:MTH00119 4 NLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 83 HANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQ 162
Cdd:MTH00119 84 HANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 163 WIWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSV 242
Cdd:MTH00119 164 WIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 243 ALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQ 322
Cdd:MTH00119 244 ALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQ 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 443908275 323 ILFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALNW 379
Cdd:MTH00119 324 LLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 740.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 1 MANIRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 81 NIHANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLT 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 241 SVALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPL 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 443908275 321 SQILFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALNW 379
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 720.27 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 1 MANIRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 81 NIHANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 161 VQWIWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLT 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 241 SVALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPL 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 443908275 321 SQILFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALNW 379
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-368 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 693.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPL 368
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 656.78 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALN 378
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLIF 378
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-364 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 652.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 11 LKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 91 FICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 171 DNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVALFSPNLL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 251 GDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQILFWTLVA 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....
gi 443908275 331 DMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLI 364
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFII 354
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
4-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 630.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00145 5 LRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00145 85 ANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00145 165 VWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00145 245 LFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQV 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIaLPLTGLLENKAL 377
Cdd:MTH00145 325 LFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
4-364 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 600.51 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00016 5 MRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00016 85 ANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00016 165 LWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00016 245 LLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQI 324
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLI 364
Cdd:MTH00016 325 LFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMI 365
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 543.14 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALN 378
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
4-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 540.83 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIALPLTGLLENKALN 378
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-378 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 528.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHPLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQI 323
Cdd:MTH00224 245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 443908275 324 LFWTLVADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIAlPLTGLLENKALN 378
Cdd:MTH00224 325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIIS-PAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
4-380 |
3.23e-143 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 411.64 E-value: 3.23e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 4 IRKTHpLLKIINGaFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIH 83
Cdd:MTH00033 3 LRKTG-LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 84 ANGASFFFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQW 163
Cdd:MTH00033 81 ANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 164 IWGGFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVA 243
Cdd:MTH00033 161 IWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 244 LFS--PNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLS 321
Cdd:MTH00033 241 IEPriETLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTG 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 322 QILFWTLVADMLVLTWIGGQPV-EHPFVLIGQVASTVYFALFLIALPLTGLLENKALNWN 380
Cdd:MTH00033 321 KFFFWFIVGDFIILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSNLFYEYN 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
18-373 |
1.54e-134 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 389.92 E-value: 1.54e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 18 FIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLH 97
Cdd:COG1290 27 HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLH 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 98 VARGMYYGSYlqKE----TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNA 173
Cdd:COG1290 107 MFRGFFYGAY--KKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDA 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 174 TLTRFFAFH-FLLPFVIAGASMIHLLFLHQTGSNNPTG----LNSDADKVTFHPYFSYKDLLGFILMLVGLTSVALFSPN 248
Cdd:COG1290 185 TLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 249 llGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQILFW 326
Cdd:COG1290 265 --NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGV 342
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 443908275 327 TLVADMLVLTWIGGQPVehPFVLIGQVASTVYFALFLIALPLTGLLE 373
Cdd:COG1290 343 AFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
12-366 |
1.29e-126 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 368.11 E-value: 1.29e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 12 KIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFF 91
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 92 ICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVD 171
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 172 NATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVgLTSVALFSPNLLG 251
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLV-FIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 252 DPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSkqrGNTFRPLSQILFWTLVAD 331
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVV 316
|
330 340 350
....*....|....*....|....*....|....*
gi 443908275 332 MLVLTWIGGQPVEHPFVLIGQVASTVYFALFLIAL 366
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
5.14e-96 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 284.65 E-value: 5.14e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 9 PLLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 89 FFFICLYLHVARGMYYGSY--LQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 443908275 167 GFSVDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
10-364 |
1.43e-95 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 289.19 E-value: 1.43e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 10 LLKIINGAFIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASF 89
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 90 FFICLYLHVARGMYYGSYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFS 169
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 170 VDNATLTRFFAFHFLLPFVIAGASMIHLLFLHQTGSNNPTGL-NSDADKVTFHPYFSYKDLLGFILMLVGLTSVALFSPN 248
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 249 LLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGvLALLFSILVLMLVPvlhtSKQRGNTFRPLSQILFWTL 328
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG-LVLVLSFLFFLWVP----TFNGSSVYSVWRQVNFWLI 315
|
330 340 350
....*....|....*....|....*....|....*.
gi 443908275 329 VADMLVLTWIGGQPVEHPFVLIGQVASTVYFALFLI 364
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
7.50e-89 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 266.17 E-value: 7.50e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 18 FIDLPTPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 98 VARGMYYG--SYLQKETWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 443908275 176 TRFFAFHFLLPFVIAGASMIHLLFLHQTG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-354 |
5.10e-56 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 180.53 E-value: 5.10e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 207 NPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 443908275 287 KLGGVLALLFSILVLMLVPVLHTSKQRgNTFRPLSQILFWTLVADMLVLTWIGGQPVEHPFVLIGQVA 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKR-SQFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
258-358 |
6.87e-49 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 160.34 E-value: 6.87e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 258 PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLHTSKQRGNTFRPLSQILFWTLVADMLVLTW 337
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 443908275 338 IGGQPVEHPFVLIGQVASTVY 358
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-253 |
1.35e-48 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 162.03 E-value: 1.35e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 88 SFFFICLYLHVARGMYYGSYLQKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 166 GGFSVDNATLTRFFAFHF-LLPFVIAGASMIHLLFLHQTGSNNPTGLNSDADKVTFHPYFSYKDLLGFILMLVGLTSVAL 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 443908275 245 FSPNLLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-208 |
4.31e-41 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 144.08 E-value: 4.31e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 33 FGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLHVARGMYYGSYLQKE- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 112 -TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAFH-FLLPFVI 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 443908275 190 AGASMIHLLFLHQTGSNNP 208
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-208 |
9.98e-35 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 127.14 E-value: 9.98e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 24 PSNISVWWNFGSLLGLCLITQILTGLFLAMHYTADISTAFSSVAHICRDVNYGWLIRNIHANGASFFFICLYLHVARGMY 103
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 104 YGSYLQKE--TWNIGVILLLLTMMTAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 443908275 182 H-FLLPFVIAGASMIHLLFLHQTGSNNP 208
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
229-339 |
7.03e-13 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 65.97 E-value: 7.03e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 229 LLGFILMLVGLtsvALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLH 308
Cdd:COG5679 45 ILGTIALCIGL---AVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIE 116
|
90 100 110
....*....|....*....|....*....|..
gi 443908275 309 TSKQRGNTF-RPLSQILFwtlVADMLVLTWIG 339
Cdd:COG5679 117 NVNKFQNPFrRPVATAVF---LFGTLVTLWLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
229-330 |
3.54e-12 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 63.87 E-value: 3.54e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 229 LLGFILMLVGLtsvALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLH 308
Cdd:CHL00058 44 ILGTIACNVGL---AVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLE 115
|
90 100
....*....|....*....|....*
gi 443908275 309 TSKQRGNTFR---PLSQILFWTLVA 330
Cdd:CHL00058 116 NVNKFQNPFRrpvATTVFLIGTAVA 140
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
229-339 |
7.61e-12 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 62.89 E-value: 7.61e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 443908275 229 LLGFILMLVGLtsvALFSPNLLGDPdnftpANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMLVPVLH 308
Cdd:TIGR01156 44 ILGTIACVVGL---AVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIE 115
|
90 100 110
....*....|....*....|....*....|..
gi 443908275 309 TSKQRGNTF-RPLSQILFwtlVADMLVLTWIG 339
Cdd:TIGR01156 116 NVNKFQNPFrRPVATTVF---LFGTVVALWLG 144
|
|
| |
