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Conserved domains on  [gi|4502303|ref|NP_001688|]
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ATP synthase subunit O, mitochondrial precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.83e-55

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 174.25  E-value: 1.83e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303     37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDItAKERFSPLTTNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    116 GRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 4502303    196 MSVKTKIQKLGRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.83e-55

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 174.25  E-value: 1.83e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303     37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDItAKERFSPLTTNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    116 GRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 4502303    196 MSVKTKIQKLGRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 2.81e-45

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 148.38  E-value: 2.81e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDItAKERFSPLTTNLINLLAE 114
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEAL-FGGKLSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303  115 NGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKYV 194
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*..
gi 4502303  195 DMSVKTKIQKLGRAMRE 211
Cdd:COG0712 162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 34-209 4.50e-39

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 132.60  E-value: 4.50e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    34 VYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPYVKRSIKVKSLNDITAKerFSPLTTNLINLLA 113
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKS--LSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   114 ENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKY 193
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*.
gi 4502303   194 VDMSVKTKIQKLGRAM 209
Cdd:PRK05758 160 IDGSVRGKLERLKDAL 175
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 4.20e-27

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 101.62  E-value: 4.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303     40 RYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVL-NPYVKRSIKvKSLNDITAKERFSPLTTNLINLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLsNPLISAEKK-KEFIKNVFGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    119 SNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVDMSV 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 4502303    199 KTKIQKLGRAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 1.83e-55

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 174.25  E-value: 1.83e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303     37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDItAKERFSPLTTNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    116 GRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 4502303    196 MSVKTKIQKLGRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 2.81e-45

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 148.38  E-value: 2.81e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDItAKERFSPLTTNLINLLAE 114
Cdd:COG0712   5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEAL-FGGKLSPETLNFLKLLVE 83

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303  115 NGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKYV 194
Cdd:COG0712  84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                       170
                ....*....|....*..
gi 4502303  195 DMSVKTKIQKLGRAMRE 211
Cdd:COG0712 162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 34-209 4.50e-39

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 132.60  E-value: 4.50e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    34 VYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPYVKRSIKVKSLNDITAKerFSPLTTNLINLLA 113
Cdd:PRK05758   4 LSTVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAAVFKS--LSEYVQNFLKVLA 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   114 ENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKY 193
Cdd:PRK05758  82 ENGRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRV 159

                        170
                 ....*....|....*.
gi 4502303   194 VDMSVKTKIQKLGRAM 209
Cdd:PRK05758 160 IDGSVRGKLERLKDAL 175
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 40-211 1.02e-32

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 116.07  E-value: 1.02e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    40 RYATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRL 118
Cdd:PRK13429   9 RYAKALFQLAKEKGQLDSVYEELKQLAELLEDsPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRL 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   119 SNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKYVDMSV 198
Cdd:PRK13429  89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMT--GKKVELDTAVDPSLIGGVVVKIGDKVLDASV 166

                        170
                 ....*....|...
gi 4502303   199 KTKIQKLGRAMRE 211
Cdd:PRK13429 167 RTQLRRLKETLKK 179
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 4.20e-27

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 101.62  E-value: 4.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303     40 RYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVL-NPYVKRSIKvKSLNDITAKERFSPLTTNLINLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKNNKELKKFLsNPLISAEKK-KEFIKNVFGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    119 SNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVDMSV 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 4502303    199 KTKIQKLGRAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 34-209 4.69e-17

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 77.29  E-value: 4.69e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    34 VYGIEGRYATALYSAASKQNKLEQVEKELLRVAQIL-KEPKVAASVLNPYVKRSIKVKSLNDITAKeRFSPLTTNLINLL 112
Cdd:PRK13430  96 ADALEELGVRALLASAEAQGALDDVEDELFRLGRILaSNPELRLALSDRAAPAEAKRELLARLLYG-KVTPVTERLAEQA 174

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   113 AENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEK 192
Cdd:PRK13430 175 VGRPRGRSIEEGLDELSNLAAARRGRSVATVTTAVPLSDEQKQRLAAALSRIY--GRPVHLNSEVDPSVLGGMRVQVGDE 252

                        170
                 ....*....|....*..
gi 4502303   193 YVDMSVKTKIQKLGRAM 209
Cdd:PRK13430 253 VIDGSVAGRLERLRRRL 269
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 41-206 8.54e-17

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 74.64  E-value: 8.54e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    41 YATALYSAASKQNKLEQVEKELLRVAQILKE-PKVAASVLNPYVKRSIKVKSLNDiTAKERFSPLTTNLINLLAENGRLS 119
Cdd:CHL00119  12 YAEALLEFAKEKNIMEQITADIQLILTFLNEsPELKKFLANPLISKNAKKEVIKK-TFGSQINENTLKFLMVLVDRGRIA 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   120 NTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlKLEAKTDPSILGGMIVRIGEKYVDMSVK 199
Cdd:CHL00119  91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEI-KLVITVDPSLIGGFLIKIGSKVIDTSIK 169


                 ....*..
gi 4502303   200 TKIQKLG 206
Cdd:CHL00119 170 GQLKQLA 176
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 36-211 4.10e-13

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 64.95  E-value: 4.10e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    36 GIEGRYATALYSAAskqNKLEQVEKELLRVAQIL-KEPKVAASVLNPYVKRSIKVKSLNDiTAKERFSPLTTNLINLLAE 114
Cdd:PRK13434   5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLfKDEKIRNFFLSPTVSPEEKEQTLAK-NLRGKISDITLNFLGVLLN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   115 NGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGEKYV 194
Cdd:PRK13434  81 KGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKF--KSEFILEVSEDKNLLGGFVVQFNDLKI 158

                        170
                 ....*....|....*..
gi 4502303   195 DMSVKTKIQKLGRAMRE 211
Cdd:PRK13434 159 EKSIASQLGEIKKAMLE 175
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 41-211 1.68e-12

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 63.15  E-value: 1.68e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    41 YATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPY-VKRSIKVKSLNDITAKErFSPLTTNLINLLAENGRLS 119
Cdd:PRK13436  11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYfIDKEEKFKIIDKIFSAK-IDIYLVNFLKILAKNNLFI 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   120 NTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKleAKTDPSILGGMIVRIGEKYVDMSVK 199
Cdd:PRK13436  90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLV--NKIDPKLIAGIKIKVDNKVFENSIK 167

                        170
                 ....*....|..
gi 4502303   200 TKIQKLGRAMRE 211
Cdd:PRK13436 168 SKLKELKKQVLK 179
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 37-207 2.61e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 60.15  E-value: 2.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    37 IEGRYATALYSAASKQNKLEqvekELLRVAQILKEPKVAASVL--NPYVKRSIKVKSLNDITA--KERFSPLTTNLINLL 112
Cdd:PRK13441   6 IASKYARALLNVAIELEKEE----EYGEFLDLVCQIYESAKEFfdNPIVKPEKKVSLIKEIMKefGQEMDEFFENFLNLV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   113 AENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVlkLEAKTDPSILGGMIVRIGEK 192
Cdd:PRK13441  82 FENKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPV--FEETIDESLIAGAVVEFEGK 159

                        170
                 ....*....|....*
gi 4502303   193 YVDMSVKTKIQKLGR 207
Cdd:PRK13441 160 RLDVTVQGRLKKIAR 174
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 34-204 5.37e-10

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 58.21  E-value: 5.37e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    34 VYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILK-EPKVAASVLNPYVKRSIKVKSL-NDITAKERFSPLTTNLINL 111
Cdd:PRK13428 268 IDALEHVARLALLERAERAGQVDEVEDQLFRFSRILDaQPRLAILLSDYTVPADGRVALLrKVLGGASTVNPVTVALLSQ 347

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303   112 LAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVLKSFLsqGQVLKLEAKTDPSILGGMIVRIGE 191
Cdd:PRK13428 348 TVELLRGQPAEEAVLFLAELAVARRGEVVAQVSAAAELSDAQRTRLTEVLSRIY--GRPVSVQLHIDPELLGGLSIAVGD 425

                        170
                 ....*....|...
gi 4502303   192 KYVDMSVKTKIQK 204
Cdd:PRK13428 426 EVIDGTLSSRLAA 438
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 40-161 1.16e-05

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 44.20  E-value: 1.16e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4502303    40 RYATALYSAASKqNKLEQVEKELLRVAQILKEPKVAASVLNPYVKRSIKVKSLNDITAKErfSPLTTNLINLLAENGRLS 119
Cdd:PRK08474   8 RYAKALLSSLSS-DELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVDNA--NAKFQNFIKLLAENKRLE 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 4502303   120 NTQGVVSAFSTMMSVHRGEVPCTVTSASPLEEATLSELKTVL 161
Cdd:PRK08474  85 LIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKL 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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