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Conserved domains on  [gi|459654086|gb|AGG78905|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Drosophila melanogaster]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-170 1.01e-83

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 248.92  E-value: 1.01e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00193  51 FSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYS 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00193 131 LLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00193 211 SGFNVEYSSG 220
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-170 1.01e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 248.92  E-value: 1.01e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00193  51 FSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYS 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00193 131 LLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00193 211 SGFNVEYSSG 220
NADHdh pfam00146
NADH dehydrogenase;
1-169 4.70e-54

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 173.04  E-value: 4.70e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086    1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:pfam00146  45 FADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNK 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESE 158
Cdd:pfam00146 125 YALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESE 204

                         170
                  ....*....|.
gi 459654086  159 LVSGFNVEYSS 169
Cdd:pfam00146 205 LVAGFHTEYSG 215
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-169 8.96e-50

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 162.61  E-value: 8.96e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:COG1005   58 LADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNK 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQV-YMWFLIILFPMALVWVSISLAETNRTPFDFAEGES 157
Cdd:COG1005  138 YSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAES 217

                        170
                 ....*....|..
gi 459654086 158 ELVSGFNVEYSS 169
Cdd:COG1005  218 ELVAGYHTEYSG 229
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-170 1.01e-83

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 248.92  E-value: 1.01e-83
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00193  51 FSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYS 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00193 131 LLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00193 211 SGFNVEYSSG 220
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-170 6.79e-74

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 223.76  E-value: 6.79e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00225  50 FADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYA 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00225 130 LLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELV 209

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00225 210 SGFNIEYSSG 219
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-170 2.09e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 202.02  E-value: 2.09e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00143  50 LADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYA 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00143 130 LLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELV 209

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00143 210 SGFNVEYGGG 219
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 3-170 4.78e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 196.77  E-value: 4.78e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALL 82
Cdd:MTH00071  56 DGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALI 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  83 GGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELVSG 162
Cdd:MTH00071 136 GALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSG 215


                 ....*...
gi 459654086 163 FNVEYSSG 170
Cdd:MTH00071 216 FNVEYAGG 223
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 3-170 1.67e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 195.11  E-value: 1.67e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALL 82
Cdd:MTH00111  56 DGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALM 135

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  83 GGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELVSG 162
Cdd:MTH00111 136 GALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSG 215


                 ....*...
gi 459654086 163 FNVEYSSG 170
Cdd:MTH00111 216 FNVEYAAG 223
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-170 1.83e-61

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 192.53  E-value: 1.83e-61
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00104  49 FADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYA 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00104 129 LIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELV 208

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00104 209 SGFNVEYAAG 218
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-170 5.00e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 185.88  E-value: 5.00e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00218  51 IADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYA 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00218 131 LMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00218 211 SGFNVEYSGG 220
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-170 3.64e-57

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 181.09  E-value: 3.64e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00195  51 IADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYA 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00195 131 LLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00195 211 SGFNVEYAGG 220
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 1-170 2.01e-55

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 176.89  E-value: 2.01e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00010  52 FADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYA 131

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQvYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00010 132 LLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELV 210

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00010 211 SGFNVEYSSG 220
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-170 6.00e-55

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 175.95  E-value: 6.00e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00134  55 IADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYA 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00134 135 LIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELV 214

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00134 215 SGFNVEYAGG 224
NADHdh pfam00146
NADH dehydrogenase;
1-169 4.70e-54

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 173.04  E-value: 4.70e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086    1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:pfam00146  45 FADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNK 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESE 158
Cdd:pfam00146 125 YALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESE 204

                         170
                  ....*....|.
gi 459654086  159 LVSGFNVEYSS 169
Cdd:pfam00146 205 LVAGFHTEYSG 215
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-170 2.85e-53

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 171.70  E-value: 2.85e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00040  53 FADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYS 132

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00040 133 LLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELV 212

                        170
                 ....*....|
gi 459654086 161 SGFNVEYSSG 170
Cdd:MTH00040 213 SGYNVEYAGG 222
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-169 8.96e-50

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 162.61  E-value: 8.96e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:COG1005   58 LADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGpgLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNK 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQV-YMWFLIILFPMALVWVSISLAETNRTPFDFAEGES 157
Cdd:COG1005  138 YSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAES 217

                        170
                 ....*....|..
gi 459654086 158 ELVSGFNVEYSS 169
Cdd:COG1005  218 ELVAGYHTEYSG 229
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-169 1.84e-48

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 159.20  E-value: 1.84e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFF--VKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:PRK06076  59 VADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGpeLVIADLNVGILYILAISSLGVYGVILAGWASNNK 138

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESE 158
Cdd:PRK06076 139 YALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESE 218

                        170
                 ....*....|.
gi 459654086 159 LVSGFNVEYSS 169
Cdd:PRK06076 219 LVAGYHTEYSG 229
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-169 1.43e-44

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 149.11  E-value: 1.43e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:MTH00054  51 LADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSK 130

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESE 158
Cdd:MTH00054 131 YAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESE 210

                        170
                 ....*....|.
gi 459654086 159 LVSGFNVEYSS 169
Cdd:MTH00054 211 LVSGFNVEYSS 221
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-169 2.92e-43

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 146.03  E-value: 2.92e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSN 78
Cdd:MTH00216  55 FADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYerGVLISDFKIGILYILAISSISVYAILMSGWGSNSK 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  79 YALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQV-YMWFLIILFPMALVWVSISLAETNRTPFDFAEGES 157
Cdd:MTH00216 135 YAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNnGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGES 214

                        170
                 ....*....|..
gi 459654086 158 ELVSGFNVEYSS 169
Cdd:MTH00216 215 ELVSGYNVEYAS 226
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 3-169 4.97e-41

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 140.54  E-value: 4.97e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVW--MCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYA 80
Cdd:MTH00029  58 DGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWaiVTMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYP 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGESELV 160
Cdd:MTH00029 138 FLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELV 217


                 ....*....
gi 459654086 161 SGFNVEYSS 169
Cdd:MTH00029 218 SGFNVEYSS 226
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 3-169 3.41e-35

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 123.86  E-value: 3.41e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALL 82
Cdd:MTH00090  47 DGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFL 126

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  83 GGLRAVAQTISYEVSLALILLSFIFligSYNMIYFFFYqvymwFLIILFPMALVWVSISLAETNRTPFDFAEGESELVSG 162
Cdd:MTH00090 127 GALRASSQSISYEIAFSLYLLSIML---HNNSFSFVSS-----FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSG 198


                 ....*..
gi 459654086 163 FNVEYSS 169
Cdd:MTH00090 199 YNVEYSS 205
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 1-169 2.73e-20

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 84.98  E-value: 2.73e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   1 FCDAIKLFTKEQTYpllsNYLSYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGG----LFFLCCTSLGVYTVMVAGWSSN 76
Cdd:MTH00058  50 FADLLKLVVKFKVY----GFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGSYSslslLWFLVVTSFSSYSLLCVGWGSY 125

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  77 SNYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMIYFFFYQVYMWFliILFPMALVWVSISLAETNRTPFDFAEGE 156
Cdd:MTH00058 126 NKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVL--LFPLIYILWLVCILCETNRTPFDYGESE 203

                        170
                 ....*....|...
gi 459654086 157 SELVSGFNVEYSS 169
Cdd:MTH00058 204 SELVSGFNTEYSG 216
ndhA CHL00032
NADH dehydrogenase subunit 1
 3-168 1.20e-18

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 81.15  E-value: 1.20e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLSYYISP---IFSLFLSLFVwmcMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNS 77
Cdd:CHL00032  78 DGTKLLFKEDLLPSRGDIRLFSIGPsiaVISILLSYLV---IPFgyHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNN 154

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  78 NYALLGGLRAVAQTISYEVSLALILLSFIFLIGSYNMI-------YFFFYQVYMWFLIILFpmaLVWVSISLAETNRTPF 150
Cdd:CHL00032 155 KYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVdiveaqsKYGFWGWNLWRQPIGF---IVFLISSLAECERLPF 231

                        170
                 ....*....|....*...
gi 459654086 151 DFAEGESELVSGFNVEYS 168
Cdd:CHL00032 232 DLPEAEEELVAGYQTEYS 249
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
3-168 1.67e-12

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 63.66  E-value: 1.67e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086   3 DAIKLFTKEQTYPLLSNYLsYYISPIFSLFLSLFVWMCMPFFVKLYSFNLGGLFFLCCTSLGVYTV--MVAGWSSNSNYA 80
Cdd:COG0650   46 DLLKLLRKETVVPETASWL-FRAAPYVALAAMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFflALAGLDSGSPFG 124

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459654086  81 LLGGLRAVAQTISYEVSLALILLSFIFLIGSYN---MIYFFFYQVYMWFLIILFPMALVWVSISLAETNRTPFDFAEGES 157
Cdd:COG0650  125 GIGASREMTLSALAEPPLLLVLFALALLAGSTSlsdIVAYQAAHGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHL 204

                        170
                 ....*....|.
gi 459654086 158 ELVSGFNVEYS 168
Cdd:COG0650  205 ELHEGMLLEYS 215
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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