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Conserved domains on  [gi|504220383|ref|WP_014407485|]
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DUF6556 family protein [Streptococcus pyogenes]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6556 pfam20193
Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. ...
 5-117 2.11e-17

Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are typically between 130 and 155 amino acids in length. Some members are predicted histone acetyltransferases.


:

Pssm-ID: 466344  Cd Length: 113  Bit Score: 72.42  E-value: 2.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504220383    5 YSRQQKPRK--SGGVPTEHIKTGFTAFQKSIALIGSILSIIVATITITRALQPVPdKTSNDTPKESSNTIVKIIEKESSq 82
Cdd:pfam20193   2 YSRRQKPKKtkSSEKPTKHIKTGFTAFQKTLALIGSILSIIVASITINNALNGNK-KTKKSDSTSTTTIIIKEINKESS- 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 504220383   83 gNQNHTGTSETTDDNKTTLPSSSTTPSHNETTPTA 117
Cdd:pfam20193  80 -NTASSSNSQTENSSSETTSSSSNTTTSSSSSDTS 113
 
Name Accession Description Interval E-value
DUF6556 pfam20193
Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. ...
 5-117 2.11e-17

Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are typically between 130 and 155 amino acids in length. Some members are predicted histone acetyltransferases.


Pssm-ID: 466344  Cd Length: 113  Bit Score: 72.42  E-value: 2.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504220383    5 YSRQQKPRK--SGGVPTEHIKTGFTAFQKSIALIGSILSIIVATITITRALQPVPdKTSNDTPKESSNTIVKIIEKESSq 82
Cdd:pfam20193   2 YSRRQKPKKtkSSEKPTKHIKTGFTAFQKTLALIGSILSIIVASITINNALNGNK-KTKKSDSTSTTTIIIKEINKESS- 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 504220383   83 gNQNHTGTSETTDDNKTTLPSSSTTPSHNETTPTA 117
Cdd:pfam20193  80 -NTASSSNSQTENSSSETTSSSSNTTTSSSSSDTS 113
 
Name Accession Description Interval E-value
DUF6556 pfam20193
Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. ...
 5-117 2.11e-17

Family of unknown function (DUF6556); This family of proteins is functionally uncharacterized. This family of proteins is found in Firmicutes. Proteins in this family are typically between 130 and 155 amino acids in length. Some members are predicted histone acetyltransferases.


Pssm-ID: 466344  Cd Length: 113  Bit Score: 72.42  E-value: 2.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 504220383    5 YSRQQKPRK--SGGVPTEHIKTGFTAFQKSIALIGSILSIIVATITITRALQPVPdKTSNDTPKESSNTIVKIIEKESSq 82
Cdd:pfam20193   2 YSRRQKPKKtkSSEKPTKHIKTGFTAFQKTLALIGSILSIIVASITINNALNGNK-KTKKSDSTSTTTIIIKEINKESS- 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 504220383   83 gNQNHTGTSETTDDNKTTLPSSSTTPSHNETTPTA 117
Cdd:pfam20193  80 -NTASSSNSQTENSSSETTSSSSNTTTSSSSSDTS 113
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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