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Conserved domains on  [gi|5107619]
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Chain A, P35

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
P35 pfam02331
Apoptosis preventing protein; This viral protein functions to block the host apoptotic ...
1-294 0e+00

Apoptosis preventing protein; This viral protein functions to block the host apoptotic response caused by infection by the virus. The apoptosis preventing protein (or early 35kD protein, P35) acts by blocking caspase protease activity.


:

Pssm-ID: 280489  Cd Length: 295  Bit Score: 557.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619      1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERD 80
Cdd:pfam02331   1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKIDEQFDQLERD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619     81 YSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFEN 160
Cdd:pfam02331  81 YSDQMDGLHDNIKYFKDEYYSVSCQKGSVLKSKFAKILKSHDYTDEKSIEAYEKYCLPKLVDERKDYYVAVCVLKPGFEN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619    161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSM 240
Cdd:pfam02331 161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDNVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNRSM 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 5107619    241 IYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVIL 294
Cdd:pfam02331 241 IYKAVEFTTESNWsSRSEKYNWKIFCNGFIYDKKSKVLYTKLHNVTSALNKNVTL 295
 
Name Accession Description Interval E-value
P35 pfam02331
Apoptosis preventing protein; This viral protein functions to block the host apoptotic ...
1-294 0e+00

Apoptosis preventing protein; This viral protein functions to block the host apoptotic response caused by infection by the virus. The apoptosis preventing protein (or early 35kD protein, P35) acts by blocking caspase protease activity.


Pssm-ID: 280489  Cd Length: 295  Bit Score: 557.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619      1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERD 80
Cdd:pfam02331   1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKIDEQFDQLERD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619     81 YSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFEN 160
Cdd:pfam02331  81 YSDQMDGLHDNIKYFKDEYYSVSCQKGSVLKSKFAKILKSHDYTDEKSIEAYEKYCLPKLVDERKDYYVAVCVLKPGFEN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619    161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSM 240
Cdd:pfam02331 161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDNVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNRSM 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 5107619    241 IYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVIL 294
Cdd:pfam02331 241 IYKAVEFTTESNWsSRSEKYNWKIFCNGFIYDKKSKVLYTKLHNVTSALNKNVTL 295
 
Name Accession Description Interval E-value
P35 pfam02331
Apoptosis preventing protein; This viral protein functions to block the host apoptotic ...
1-294 0e+00

Apoptosis preventing protein; This viral protein functions to block the host apoptotic response caused by infection by the virus. The apoptosis preventing protein (or early 35kD protein, P35) acts by blocking caspase protease activity.


Pssm-ID: 280489  Cd Length: 295  Bit Score: 557.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619      1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERD 80
Cdd:pfam02331   1 CVIFPVEIDVSQTIIRDCQVDKQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKIDEQFDQLERD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619     81 YSDQMDGFHDSIKYFKDEHYSVSCQNGSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDERNDYYVAVCVLKPGFEN 160
Cdd:pfam02331  81 YSDQMDGLHDNIKYFKDEYYSVSCQKGSVLKSKFAKILKSHDYTDEKSIEAYEKYCLPKLVDERKDYYVAVCVLKPGFEN 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5107619    161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSM 240
Cdd:pfam02331 161 GSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVLAYVDNVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNRSM 240
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 5107619    241 IYKALEFTTESSW-GKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVIL 294
Cdd:pfam02331 241 IYKAVEFTTESNWsSRSEKYNWKIFCNGFIYDKKSKVLYTKLHNVTSALNKNVTL 295
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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