|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
497-762 |
6.32e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 93.84 E-value: 6.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 497 TLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSSN 576
Cdd:COG4886 51 LLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 577 ShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefkgnhldvlwrdgdnrYLDFFKNLLNLEELD 656
Cdd:COG4886 124 Q-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSLD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 657 ISRNSLNSLPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKTLDLSHNQLTTVPARLANCsKSLTKLILNHNQIR 736
Cdd:COG4886 166 LSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQLT 241
|
250 260
....*....|....*....|....*.
gi 549439542 737 QLTKyfLEDALQLRYLDISSNKIQVI 762
Cdd:COG4886 242 DLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
189-733 |
4.77e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 92.99 E-value: 4.77e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 189 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEDDFNKLSQLQVLDLSGNCpRCYNVPy 267
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 268 pctpcennsplqiheNAFGSLTELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYLAREIeeAKFLTSLPNLVQLDLS 347
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDLV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 348 FNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHKLPNLEVLDLGTNFI--KIADLNIfqQFENLKFI 425
Cdd:PLN00113 245 YN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEIL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 426 DLSVNKISpseesrevGFCPNAQTSVDRHgpQVLEALhyfrydeyarSCRFKNKepptfLPLNADCHTYGQTLDLSRNN- 504
Cdd:PLN00113 314 HLFSNNFT--------GKIPVALTSLPRL--QVLQLW----------SNKFSGE-----IPKNLGKHNNLTVLDLSTNNl 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 505 -----------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTA 561
Cdd:PLN00113 369 tgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINSR 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 562 FEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFKGNHLdvlwrDGD- 639
Cdd:PLN00113 448 KWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGEi 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 640 NRYLDFFKNLLNleeLDISRNSLNSLPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKTLDLSHNQLT-TVPARL 718
Cdd:PLN00113 516 PDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKNL 567
|
570
....*....|....*
gi 549439542 719 ANCsKSLTKLILNHN 733
Cdd:PLN00113 568 GNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
165-484 |
3.64e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 88.45 E-value: 3.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 165 ENLTELVNIESLYLGQNCYYRNPCNVSYsiekdaflvMKNLKVLSLKDNNVTAVPTILP--PNLLELYLYNNIIKRIqED 242
Cdd:COG4886 107 EELSNLTNLESLDLSGNQLTDLPEELAN---------LTNLKELDLSNNQLTDLPEPLGnlTNLKSLDLSNNQLTDL-PE 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 243 DFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHE--NAFGSLTELKVLRLHSNSLQHVSAkWFKNMSNLQELDL 320
Cdd:COG4886 177 ELGNLTNLKELDLSNN--------------------QITDlpEPLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDL 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 321 SQNylarEIEEAKFLTSLPNLVQLDLSFNYelqvyhasITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLHKLPNLEV 400
Cdd:COG4886 236 SNN----QLTDLPELGNLTNLEELDLSNNQ--------LTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 401 LDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGFCPNAQTSVDRHGPQVLEALHYFRYDEYARSCRFKNKE 480
Cdd:COG4886 304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383
|
....
gi 549439542 481 PPTF 484
Cdd:COG4886 384 LLLL 387
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
890-1035 |
8.05e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.66 E-value: 8.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 890 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 969
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 970 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1035
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
197-349 |
1.10e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.50 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 197 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIqeDDFNKLSQLQVLDLSGNC-------PRCYN---- 264
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNRisvveglENLTNleel 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 265 -VPYPCTPCENnsPLQIHENAFGSLTE-LKVLRLHSNSLQhvSAKWFKNMSNLQELDLSQNYLaREIEEAK-FLTSLPNL 341
Cdd:cd21340 96 hIENQRLPPGE--KLTFDPRSLAALSNsLRVLNISGNNID--SLEPLAPLRNLEQLDASNNQI-SDLEELLdLLSSWPSL 170
|
....*...
gi 549439542 342 VQLDLSFN 349
Cdd:cd21340 171 RELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
289-349 |
1.95e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.45 E-value: 1.95e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549439542 289 TELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYLaREIEEAKFlTSLPNLVQLDLSFN 349
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
891-1016 |
2.81e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 891 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 970
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 549439542 971 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1016
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
675-735 |
1.95e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.76 E-value: 1.95e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549439542 675 PNLTTLSLAKNGLRSFSWGRLQLLKHLKTLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 735
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
537-741 |
2.38e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 55.56 E-value: 2.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 537 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 616
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 617 eseslrVLEfkgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnslPPGV---FE-----GMPPNLTTLSLAKNGLR 688
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 549439542 689 SFSWgrLQLLKHLKTLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 741
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
641-759 |
9.52e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 56.24 E-value: 9.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 641 RYLDFFKNLL---------NLEELDISRNSLNSLPpgvfEGMPPNLTTLSLAKNGLRSFSwgrLQLLKHLKTLDLSHNQL 711
Cdd:PRK15370 286 RYLSVYDNSIrtlpahlpsGITHLNVQSNSLTALP----ETLPPGLKTLEAGENALTSLP---ASLPPELQVLDVSKNQI 358
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 549439542 712 TTVPARLancSKSLTKLILNHNQIRQLTKYfLEDALQlrYLDISSNKI 759
Cdd:PRK15370 359 TVLPETL---PPTITTLDVSRNALTNLPEN-LPAALQ--IMQASRNNL 400
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
74-138 |
6.07e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 6.07e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 549439542 74 NHIPSISPDSFHRLNHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 138
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
649-672 |
6.65e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 35.02 E-value: 6.65e-03
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
497-762 |
6.32e-20 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 93.84 E-value: 6.32e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 497 TLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRldllystAFEELQNLEILDLSSN 576
Cdd:COG4886 51 LLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 577 ShyfqaegITHMLNFTKKLRHLEKLMMNDNDISTsasrtmeseslrvlefkgnhldvlwrdgdnrYLDFFKNLLNLEELD 656
Cdd:COG4886 124 Q-------LTDLPEELANLTNLKELDLSNNQLTD-------------------------------LPEPLGNLTNLKSLD 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 657 ISRNSLNSLPPgVFEGMPpNLTTLSLAKNGLRSFSWGrLQLLKHLKTLDLSHNQLTTVPARLANCsKSLTKLILNHNQIR 736
Cdd:COG4886 166 LSNNQLTDLPE-ELGNLT-NLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQLTDLPEPLANL-TNLETLDLSNNQLT 241
|
250 260
....*....|....*....|....*.
gi 549439542 737 QLTKyfLEDALQLRYLDISSNKIQVI 762
Cdd:COG4886 242 DLPE--LGNLTNLEELDLSNNQLTDL 265
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
189-733 |
4.77e-19 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 92.99 E-value: 4.77e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 189 NVSYSIEKDAFLVMKNLKVLSLKDNNVT-AVPTILPPNLLELYLYNNIIKRIQEDDFNKLSQLQVLDLSGNCpRCYNVPy 267
Cdd:PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTgSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV-LVGKIP- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 268 pctpcennsplqiheNAFGSLTELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYLAREIeeAKFLTSLPNLVQLDLS 347
Cdd:PLN00113 182 ---------------NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI--PYEIGGLTSLNHLDLV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 348 FNyelqvyHASITLPHSLSSLTKLKNLYIkgYVFKeLKDSSLSVLHKLPNLEVLDLGTNFI--KIADLNIfqQFENLKFI 425
Cdd:PLN00113 245 YN------NLTGPIPSSLGNLKNLQYLFL--YQNK-LSGPIPPSIFSLQKLISLDLSDNSLsgEIPELVI--QLQNLEIL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 426 DLSVNKISpseesrevGFCPNAQTSVDRHgpQVLEALhyfrydeyarSCRFKNKepptfLPLNADCHTYGQTLDLSRNN- 504
Cdd:PLN00113 314 HLFSNNFT--------GKIPVALTSLPRL--QVLQLW----------SNKFSGE-----IPKNLGKHNNLTVLDLSTNNl 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 505 -----------------IFFIK------PSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTA 561
Cdd:PLN00113 369 tgeipeglcssgnlfklILFSNslegeiPKSLGACRSLRRVRLQDNSFSGELP-SEFTKLPLVYFLDISNNNLQGRINSR 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 562 FEELQNLEILDLSSNShyFQAEgithmLNFTKKLRHLEKLMMNDNDISTSASRTMESES-LRVLEFKGNHLdvlwrDGD- 639
Cdd:PLN00113 448 KWDMPSLQMLSLARNK--FFGG-----LPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSeLMQLKLSENKL-----SGEi 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 640 NRYLDFFKNLLNleeLDISRNSLNSLPPGVFEGMPPnlttlslaknglrsfswgrlqllkhLKTLDLSHNQLT-TVPARL 718
Cdd:PLN00113 516 PDELSSCKKLVS---LDLSHNQLSGQIPASFSEMPV-------------------------LSQLDLSQNQLSgEIPKNL 567
|
570
....*....|....*
gi 549439542 719 ANCsKSLTKLILNHN 733
Cdd:PLN00113 568 GNV-ESLVQVNISHN 581
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
496-841 |
1.12e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 89.99 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 496 QTLDLSRNNIFFikpsdfkHLSFLKCLNLSGNAIGQTlnGSELQPLRELRYLDFSNNRLDLLySTAFEELQNLEILDLSS 575
Cdd:COG4886 99 TELDLSGNEELS-------NLTNLESLDLSGNQLTDL--PEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSN 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 576 NshyfqaeGITHMLNFTKKLRHLEKLMMNDNDISTSASRTMESESLRVLEFKGNHLDVLwrdgdnryLDFFKNLLNLEEL 655
Cdd:COG4886 169 N-------QLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDL--------PEPLANLTNLETL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 656 DISRNSLNSLPpgVFEGMPpNLTTLSLAKNGLRSFSwgRLQLLKHLKTLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 735
Cdd:COG4886 234 DLSNNQLTDLP--ELGNLT-NLEELDLSNNQLTDLP--PLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 736 RQLTKYFLEDALQLRYLDISSNKIQVIQKTSFPENILNNLNMLLLHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCA 815
Cdd:COG4886 309 NLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
330 340
....*....|....*....|....*.
gi 549439542 816 GPGAHKGQSVISLDLYTCELDLTNLI 841
Cdd:COG4886 389 LLLLLLTTTAGVLLLTLALLDAVNTE 414
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
165-484 |
3.64e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 88.45 E-value: 3.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 165 ENLTELVNIESLYLGQNCYYRNPCNVSYsiekdaflvMKNLKVLSLKDNNVTAVPTILP--PNLLELYLYNNIIKRIqED 242
Cdd:COG4886 107 EELSNLTNLESLDLSGNQLTDLPEELAN---------LTNLKELDLSNNQLTDLPEPLGnlTNLKSLDLSNNQLTDL-PE 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 243 DFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHE--NAFGSLTELKVLRLHSNSLQHVSAkWFKNMSNLQELDL 320
Cdd:COG4886 177 ELGNLTNLKELDLSNN--------------------QITDlpEPLGNLTNLEELDLSGNQLTDLPE-PLANLTNLETLDL 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 321 SQNylarEIEEAKFLTSLPNLVQLDLSFNYelqvyhasITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLHKLPNLEV 400
Cdd:COG4886 236 SNN----QLTDLPELGNLTNLEELDLSNNQ--------LTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 401 LDLGTNFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGFCPNAQTSVDRHGPQVLEALHYFRYDEYARSCRFKNKE 480
Cdd:COG4886 304 LLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383
|
....
gi 549439542 481 PPTF 484
Cdd:COG4886 384 LLLL 387
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
125-433 |
3.98e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 88.07 E-value: 3.98e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 125 LSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSITKENLTELVNIESLYLGQNcyyrnpcnvsysiekDAFLVMKN 204
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN---------------EELSNLTN 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 205 LKVLSLKDNNVTAVPtilppnllelylynniikriqeDDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHE-- 282
Cdd:COG4886 115 LESLDLSGNQLTDLP----------------------EELANLTNLKELDLSNN--------------------QLTDlp 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 283 NAFGSLTELKVLRLHSNSLQHVSAkWFKNMSNLQELDLSQNYLAreiEEAKFLTSLPNLVQLDLSFNyELQvyhasiTLP 362
Cdd:COG4886 153 EPLGNLTNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQIT---DLPEPLGNLTNLEELDLSGN-QLT------DLP 221
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549439542 363 HSLSSLTKLKNLYIKGyvfKELKDssLSVLHKLPNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 433
Cdd:COG4886 222 EPLANLTNLETLDLSN---NQLTD--LPELGNLTNLEELDLSNN--QLTDLPPLANLTNLKTLDLSNNQLT 285
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
122-431 |
1.55e-17 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.14 E-value: 1.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 122 FSGLSDLKSLYLDGNQLLEIPqdlpsslqllsleannifsitkENLTELVNIESLYLGQNCYYRNPCNVSYsiekdaflv 201
Cdd:COG4886 109 LSNLTNLESLDLSGNQLTDLP----------------------EELANLTNLKELDLSNNQLTDLPEPLGN--------- 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 202 MKNLKVLSLKDNNVTAVPTILP--PNLLELYLYNNIIKRIQEDdFNKLSQLQVLDLSGNcprcynvpypctpcennsplQ 279
Cdd:COG4886 158 LTNLKSLDLSNNQLTDLPEELGnlTNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGN--------------------Q 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 280 IHE--NAFGSLTELKVLRLHSNSLQHVSakWFKNMSNLQELDLSQNylarEIEEAKFLTSLPNLVQLDLSFNYELQVYHA 357
Cdd:COG4886 217 LTDlpEPLANLTNLETLDLSNNQLTDLP--ELGNLTNLEELDLSNN----QLTDLPPLANLTNLKTLDLSNNQLTDLKLK 290
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 549439542 358 SITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLHKLPNLEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNK 431
Cdd:COG4886 291 ELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLT 364
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
80-431 |
2.49e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 79.59 E-value: 2.49e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 80 SPDSFHRLNHLEELDLRCNcvpillgskanvctkRLQIRPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqllsleanni 159
Cdd:COG4886 105 GNEELSNLTNLESLDLSGN---------------QLTDLPEELANLTNLKELDLSNNQLTDLP----------------- 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 160 fsitkENLTELVNIESLYLGQNcyyrnpcnvsySIEK--DAFLVMKNLKVLSLKDNNVTAVPTIL--PPNLLELYLYNNI 235
Cdd:COG4886 153 -----EPLGNLTNLKSLDLSNN-----------QLTDlpEELGNLTNLKELDLSNNQITDLPEPLgnLTNLEELDLSGNQ 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 236 IKRIqEDDFNKLSQLQVLDLSGNcprcynvpypctpcennsplQIHE-NAFGSLTELKVLRLHSNSLQHVSAkwFKNMSN 314
Cdd:COG4886 217 LTDL-PEPLANLTNLETLDLSNN--------------------QLTDlPELGNLTNLEELDLSNNQLTDLPP--LANLTN 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 315 LQELDLSQNYLAR-EIEEAKFLTSLPNLVQLDLSFNYELQVYHASITLPHSLSSLTKLKNLYIKGYVFKELKDSSLSVLH 393
Cdd:COG4886 274 LKTLDLSNNQLTDlKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
330 340 350
....*....|....*....|....*....|....*...
gi 549439542 394 KLPNLEVLDLGTNFIKIADLNIFQQFENLKFIDLSVNK 431
Cdd:COG4886 354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLL 391
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
155-433 |
3.62e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.82 E-value: 3.62e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 155 EANNIFSITKENLTELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVMKNLKVLSLKDNNVTAVPTILPPNLLELYLYNN 234
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 235 IIKRIQEDDFNKLSQLQVLDLSGNCPRcynvpypcTPCENNSPLQIHEN-------AFGSLTELKVLRLHSNSLQHVSaK 307
Cdd:COG4886 83 SLLLLGLTDLGDLTNLTELDLSGNEEL--------SNLTNLESLDLSGNqltdlpeELANLTNLKELDLSNNQLTDLP-E 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 308 WFKNMSNLQELDLSQNYLaREIEEAkfLTSLPNLVQLDLSFNyelqvyhaSIT-LPHSLSSLTKLKNLYIKGYVFKELKD 386
Cdd:COG4886 154 PLGNLTNLKSLDLSNNQL-TDLPEE--LGNLTNLKELDLSNN--------QITdLPEPLGNLTNLEELDLSGNQLTDLPE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 549439542 387 SslsvLHKLPNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 433
Cdd:COG4886 223 P----LANLTNLETLDLSNN--QLTDLPELGNLTNLEELDLSNNQLT 263
|
|
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
890-1035 |
8.05e-14 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 69.66 E-value: 8.05e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 890 CYDAFIVYdtknsAVTEWVLQELVVKLEDpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKM 969
Cdd:smart00255 1 EYDVFISY-----SGKEDVRNEFLSHLLE-KLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLD 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 970 AFYLSHQRLMDEKVDVIILIFLEK----PLQKSKFLQLRKRlcsSSVLEWPTNPQAHpyFWqclKNALTT 1035
Cdd:smart00255 75 ELVAALENALEEGGLRVIPIFYEVipsdVRKQPGKFRKVFK---KNYLKWPEDEKEQ--FW---KKALYA 136
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
119-576 |
4.07e-12 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 70.65 E-value: 4.07e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 119 PGSFSGLSDLKSLYLDGNQLL-EIPQDlpsslqllsleannifsitkenLTELVNIESLYLGQNcyyrnpcNVSYSIEKD 197
Cdd:PLN00113 181 PNSLTNLTSLEFLTLASNQLVgQIPRE----------------------LGQMKSLKWIYLGYN-------NLSGEIPYE 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 198 aFLVMKNLKVLSLKDNNVTA-VPTILP--PNLLELYLYNNIIK-RIQEDDFNkLSQLQVLDLSGNCpRCYNVPYPCTPCE 273
Cdd:PLN00113 232 -IGGLTSLNHLDLVYNNLTGpIPSSLGnlKNLQYLFLYQNKLSgPIPPSIFS-LQKLISLDLSDNS-LSGEIPELVIQLQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 274 NNSPLQIHENAF--------GSLTELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYLAREIEEAkfLTSLPNLVQLD 345
Cdd:PLN00113 309 NLEILHLFSNNFtgkipvalTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG--LCSSGNLFKLI 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 346 L-SFNYELQVyhasitlPHSLSSLTKLKNLyikgyvfkELKDSSLSVlhklpnlevlDLGTNFIKIADLNifqqfenlkF 424
Cdd:PLN00113 387 LfSNSLEGEI-------PKSLGACRSLRRV--------RLQDNSFSG----------ELPSEFTKLPLVY---------F 432
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 425 IDLSVNKISPSEESREVGFcpnaqtsvdrhgPQvLEALHYFRYdeyarscRFKNKEPPTFLPLNAdchtygQTLDLSRNN 504
Cdd:PLN00113 433 LDISNNNLQGRINSRKWDM------------PS-LQMLSLARN-------KFFGGLPDSFGSKRL------ENLDLSRNQ 486
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 549439542 505 IFFIKPSDFKHLSFLKCLNLSGNAIGQTLNgSELQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSN 576
Cdd:PLN00113 487 FSGAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQN 557
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
604-762 |
4.92e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 66.11 E-value: 4.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 604 NDNDISTSASRTMESESLRVLEFKGNHLDVLWRDGDNRYLDFFKNLLNLEELDISRNS-LNSLPpgvfegmppNLTTLSL 682
Cdd:COG4886 50 TLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGNEeLSNLT---------NLESLDL 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 683 AKNGLRSFSWGrLQLLKHLKTLDLSHNQLTTVPARLANCsKSLTKLILNHNQIRQLTKyFLEDALQLRYLDISSNKIQVI 762
Cdd:COG4886 121 SGNQLTDLPEE-LANLTNLKELDLSNNQLTDLPEPLGNL-TNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL 197
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
197-349 |
1.10e-10 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 62.50 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 197 DAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIqeDDFNKLSQLQVLDLSGNC-------PRCYN---- 264
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIENLEFlTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNRisvveglENLTNleel 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 265 -VPYPCTPCENnsPLQIHENAFGSLTE-LKVLRLHSNSLQhvSAKWFKNMSNLQELDLSQNYLaREIEEAK-FLTSLPNL 341
Cdd:cd21340 96 hIENQRLPPGE--KLTFDPRSLAALSNsLRVLNISGNNID--SLEPLAPLRNLEQLDASNNQI-SDLEELLdLLSSWPSL 170
|
....*...
gi 549439542 342 VQLDLSFN 349
Cdd:cd21340 171 RELDLTGN 178
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
202-403 |
1.39e-09 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 59.41 E-value: 1.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 202 MKNLKVLSLKDNNVTAVPTI-LPPNLLELYLYNNIIKRIqeDDFNKLSQLQVLDLSGNCprcynvpypCTPCENnsplqi 280
Cdd:cd21340 1 LKRITHLYLNDKNITKIDNLsLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ---------IEKIEN------ 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 281 henaFGSLTELKVLRLHSNSLQHVSAkwFKNMSNLQELDLSQNYLAR----EIEEAKFLTSLPNLVQLDLSFNyelqvyh 356
Cdd:cd21340 64 ----LENLVNLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPgeklTFDPRSLAALSNSLRVLNISGN------- 130
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 549439542 357 aSITLPHSLSSLTKLKNLYIKGYVFKELKDsSLSVLHKLPNLEVLDL 403
Cdd:cd21340 131 -NIDSLEPLAPLRNLEQLDASNNQISDLEE-LLDLLSSWPSLRELDL 175
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
289-349 |
1.95e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 54.45 E-value: 1.95e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549439542 289 TELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYLaREIEEAKFlTSLPNLVQLDLSFN 349
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAF-SGLPSLRYLDLSGN 59
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
891-1016 |
2.81e-09 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 57.37 E-value: 2.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 891 YDAFIvyDTKNSAVTEWVLQELvvkLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAktESFKMA 970
Cdd:pfam01582 1 YDVFL--SFRGSDTREWFVSHL---LKELKQKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYA--SSGWCL 73
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 549439542 971 FYLSH-QRLMDEKVDVIILIFLEK-----PLQKSKFLQLRKRLCS----SSVLEWP 1016
Cdd:pfam01582 74 DELVKiLECALDLGQKVIPIFYEVdpsdvRKQTGSFGKAFKKHKKvlteEKVLKWR 129
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
675-735 |
1.95e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.76 E-value: 1.95e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 549439542 675 PNLTTLSLAKNGLRSFSWGRLQLLKHLKTLDLSHNQLTTVPARLANCSKSLTKLILNHNQI 735
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
537-741 |
2.38e-08 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 55.56 E-value: 2.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 537 ELQPLRELRYLDFSNNRLDLLysTAFEELQNLEILDLSSNShyfqaegITHMLNFTKkLRHLEKLMMNDNDIStsasrtm 616
Cdd:cd21340 19 NLSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQ-------IEKIENLEN-LVNLKKLYLGGNRIS------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 617 eseslrVLEfkgnHLDvlwrdgdnryldffkNLLNLEELDISRNSLnslPPGV---FE-----GMPPNLTTLSLAKNGLR 688
Cdd:cd21340 82 ------VVE----GLE---------------NLTNLEELHIENQRL---PPGEkltFDprslaALSNSLRVLNISGNNID 133
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 549439542 689 SFSWgrLQLLKHLKTLDLSHNQLTTVP--ARLANCSKSLTKLILNHNQIRQLTKY 741
Cdd:cd21340 134 SLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGNPVCKKPKY 186
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
513-759 |
2.87e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 56.59 E-value: 2.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 513 FKHLSFLKCLNLSGNAIGQT---LNGSELQPLRELRYLDFSNNRL-DLLYST-----AFEELQNLEILDLSSNShyFQAE 583
Cdd:cd00116 19 LPKLLCLQVLRLEGNTLGEEaakALASALRPQPSLKELCLSLNETgRIPRGLqsllqGLTKGCGLQELDLSDNA--LGPD 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 584 GITHMLNFTKKLRhLEKLMMNDNDISTSASR------TMESESLRVLEFKGNHLDVlwrDGDNRYLDFFKNLLNLEELDI 657
Cdd:cd00116 97 GCGVLESLLRSSS-LQELKLNNNGLGDRGLRllakglKDLPPALEKLVLGRNRLEG---ASCEALAKALRANRDLKELNL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 658 SRNSLNslPPGV---FEGMP--PNLTTLSLAKNGLR----SFSWGRLQLLKHLKTLDLSHNQLTTVPAR-----LANCSK 723
Cdd:cd00116 173 ANNGIG--DAGIralAEGLKanCNLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLTDAGAAalasaLLSPNI 250
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 549439542 724 SLTKLILNHNQIRQLT----KYFLEDALQLRYLDISSNKI 759
Cdd:cd00116 251 SLLTLSLSCNDITDDGakdlAEVLAEKESLLELDLRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
496-554 |
4.48e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 50.60 E-value: 4.48e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 549439542 496 QTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIgQTLNGSELQPLRELRYLDFSNNRL 554
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
641-759 |
9.52e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 56.24 E-value: 9.52e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 641 RYLDFFKNLL---------NLEELDISRNSLNSLPpgvfEGMPPNLTTLSLAKNGLRSFSwgrLQLLKHLKTLDLSHNQL 711
Cdd:PRK15370 286 RYLSVYDNSIrtlpahlpsGITHLNVQSNSLTALP----ETLPPGLKTLEAGENALTSLP---ASLPPELQVLDVSKNQI 358
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 549439542 712 TTVPARLancSKSLTKLILNHNQIRQLTKYfLEDALQlrYLDISSNKI 759
Cdd:PRK15370 359 TVLPETL---PPTITTLDVSRNALTNLPEN-LPAALQ--IMQASRNNL 400
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
496-748 |
3.90e-07 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 53.64 E-value: 3.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 496 QTLDLSRNNIFFIKPSDF-KHLSF---LKCLNLSGNAIGqtLNGSE-----LQPLRELRYLDFSNNRLD----LLYSTAF 562
Cdd:COG5238 183 ETVYLGCNQIGDEGIEELaEALTQnttVTTLWLKRNPIG--DEGAEilaeaLKGNKSLTTLDLSNNQIGdegvIALAEAL 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 563 EELQNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFKGNHLDVlwrD 637
Cdd:COG5238 261 KNNTTVETLYLSGN--QIGAEGAIALAKALQGNTTLTSLDLSVNRIGDEGAIALaeglqGNKTLHTLNLAYNGIGA---Q 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 638 GDNRYLDFFKNLLNLEELDISRNSLNSlppgvfEGM---------PPNLTTLSLAKNGLRSFswGRLQLLKHLKTldlsh 708
Cdd:COG5238 336 GAIALAKALQENTTLHSLDLSDNQIGD------EGAialakylegNTTLRELNLGKNNIGKQ--GAEALIDALQT----- 402
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 549439542 709 NQLTTvparlancsksltkLILNHNQIRQLTKYFLEDALQ 748
Cdd:COG5238 403 NRLHT--------------LILDGNLIGAEAQQRLEQLLE 428
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
283-433 |
5.10e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 51.71 E-value: 5.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 283 NAFGSLTELKVLRLHSNSLQHVSAkwFKNMSNLQELDLSQNYLaREIEeakFLTSLPNLVQLDLSFNyelqvyhaSITLP 362
Cdd:cd21340 18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQI-EKIE---NLENLVNLKKLYLGGN--------RISVV 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 549439542 363 HSLSSLTKLKNLYIKG--------YVFKELKDSSLSvlhklPNLEVLDLGTNfiKIADLNIFQQFENLKFIDLSVNKIS 433
Cdd:cd21340 84 EGLENLTNLEELHIENqrlppgekLTFDPRSLAALS-----NSLRVLNISGN--NIDSLEPLAPLRNLEQLDASNNQIS 155
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
74-138 |
6.07e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.52 E-value: 6.07e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 549439542 74 NHIPSISPDSFHRLNHLEELDLRCNCVPIllgskanvctkrlqIRPGSFSGLSDLKSLYLDGNQL 138
Cdd:pfam13855 11 NRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------LSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
274-325 |
7.61e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 47.13 E-value: 7.61e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 549439542 274 NNSPLQIHENAFGSLTELKVLRLHSNSLQHVSAKWFKNMSNLQELDLSQNYL 325
Cdd:pfam13855 10 NNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
52-258 |
8.73e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.16 E-value: 8.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 52 DKHLTEIPEGIPTNTTNLTLTINHIPSIsPDsfHRLNHLEELDLRCNCVPILlgskanvctkrlqirPGSFSglSDLKSL 131
Cdd:PRK15370 229 SNQLTSIPATLPDTIQEMELSINRITEL-PE--RLPSALQSLDLFHNKISCL---------------PENLP--EELRYL 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 132 YLDGNQLLEIPQDLPSSLQLLSLEANnifSITKENLTELVNIESLYLGQNCYYRNPCNVSysiekdaflvmKNLKVLSLK 211
Cdd:PRK15370 289 SVYDNSIRTLPAHLPSGITHLNVQSN---SLTALPETLPPGLKTLEAGENALTSLPASLP-----------PELQVLDVS 354
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 549439542 212 DNNVTAVPTILPPNLLELYLYNNIIKRIQEddfNKLSQLQVLDLSGN 258
Cdd:PRK15370 355 KNQITVLPETLPPTITTLDVSRNALTNLPE---NLPAALQIMQASRN 398
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
894-992 |
1.64e-06 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 48.08 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 894 FIVYDTKNSAVTEWVLQELvvkledpREKHFNLCLEERDWLPGQPVLENLSQSIQLSRKTVFVMTQKYAKTESFKMAFYL 973
Cdd:pfam13676 2 FISYAGEDRAWAEWLADAL-------EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWEA 74
|
90
....*....|....*....
gi 549439542 974 SHQRLMDEKvdVIILIFLE 992
Cdd:pfam13676 75 ALADPEGRK--RLIPVRLE 91
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
103-301 |
2.12e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 52.01 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 103 LLGSKANVCTKRLQIRPGSFSGLSDLKSLYLDGNQLLEIPQDLPSSLQLLSLEANNIFSI-------------TKENLTE 169
Cdd:PRK15370 176 LKNNKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIpatlpdtiqemelSINRITE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 170 LVN-----IESLYLGQNCYYRNPCNVSysiekdaflvmKNLKVLSLKDNNVTAVPTILPPNLLELYLYNNIIK------- 237
Cdd:PRK15370 256 LPErlpsaLQSLDLFHNKISCLPENLP-----------EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTalpetlp 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 238 ---RIQEDDFNKLS--------QLQVLDLSGNcpRCYNVPYPCTPceNNSPLQIHENAFGSLTE-----LKVLRLHSNSL 301
Cdd:PRK15370 325 pglKTLEAGENALTslpaslppELQVLDVSKN--QITVLPETLPP--TITTLDVSRNALTNLPEnlpaaLQIMQASRNNL 400
|
|
| LRR_12 |
pfam18837 |
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the ... |
398-427 |
4.10e-06 |
|
Leucine-rich repeat; This Pfam entry includes some LRRs that fail to be detected with the pfam00560 model. This entry represents one repeat unit.
Pssm-ID: 408607 Cd Length: 30 Bit Score: 44.26 E-value: 4.10e-06
10 20 30
....*....|....*....|....*....|
gi 549439542 398 LEVLDLGTNFIKIADLNIFQQFENLKFIDL 427
Cdd:pfam18837 1 LQTLHLQMNFINQAQLSIFGAFPGLRFVDL 30
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
74-258 |
4.69e-06 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 50.32 E-value: 4.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 74 NHIPSIsPDSFHRLNHLEELDLRCNCVPILlgskanvctkrlqirPGSFSGLSDLKSLYLDGNQLLEIPqdlpsslqlls 153
Cdd:COG4886 169 NQLTDL-PEELGNLTNLKELDLSNNQITDL---------------PEPLGNLTNLEELDLSGNQLTDLP----------- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 154 leannifsitkENLTELVNIESLYLGQNcyyrnpcNVSysiEKDAFLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLY 232
Cdd:COG4886 222 -----------EPLANLTNLETLDLSNN-------QLT---DLPELGNLTNLEELDLSNNQLTDLPPLANlTNLKTLDLS 280
|
170 180
....*....|....*....|....*.
gi 549439542 233 NNIIKRIQEDDFNKLSQLQVLDLSGN 258
Cdd:COG4886 281 NNQLTDLKLKELELLLGLNSLLLLLL 306
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
620-687 |
6.21e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.44 E-value: 6.21e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 549439542 620 SLRVLEFKGNHLDVLwRDGdnryldFFKNLLNLEELDISRNSLNSLPPGVFEGMpPNLTTLSLAKNGL 687
Cdd:pfam13855 2 NLRSLDLSNNRLTSL-DDG------AFKGLSNLKVLDLSNNLLTTLSPGAFSGL-PSLRYLDLSGNRL 61
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
566-759 |
8.44e-06 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 49.40 E-value: 8.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 566 QNLEILDLSSNshYFQAEGITHMLNFTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFKGNHLdvlwrdGDN 640
Cdd:COG5238 180 NSVETVYLGCN--QIGDEGIEELAEALTQNTTVTTLWLKRNPIGDEGAEILaealkGNKSLTTLDLSNNQI------GDE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 641 RYLDFFKNLLN---LEELDISRNSLNSlppgvfEGMppnlttLSLAKNglrsfswgrLQLLKHLKTLDLSHNQLTTVPAR 717
Cdd:COG5238 252 GVIALAEALKNnttVETLYLSGNQIGA------EGA------IALAKA---------LQGNTTLTSLDLSVNRIGDEGAI 310
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 549439542 718 -LANC---SKSLTKLILNHNQIRQLTKYFLEDALQ----LRYLDISSNKI 759
Cdd:COG5238 311 aLAEGlqgNKTLHTLNLAYNGIGAQGAIALAKALQenttLHSLDLSDNQI 360
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
497-760 |
1.43e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.08 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 497 TLDLSRNNIFFIKPSDFKHLSFLKCLNLSGNAIGQTLNGSELQPLRELRYLDFSNNRLDLLYSTAFeeLQNLEILDLSSN 576
Cdd:PLN00113 73 SIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGS--IPNLETLDLSNN 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 577 ---SHYFQAEG---------------ITHMLNFTKKLRHLEKLMMNDNDISTSASR---TMESESLRVLEFKG------- 628
Cdd:PLN00113 151 mlsGEIPNDIGsfsslkvldlggnvlVGKIPNSLTNLTSLEFLTLASNQLVGQIPRelgQMKSLKWIYLGYNNlsgeipy 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 629 --------NHLDVLWRD------------GDNRYLDFFKNLL------------NLEELDISRNSLNSLPPGVFEGMpPN 676
Cdd:PLN00113 231 eiggltslNHLDLVYNNltgpipsslgnlKNLQYLFLYQNKLsgpippsifslqKLISLDLSDNSLSGEIPELVIQL-QN 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 677 LTTLSLAKNGLRS------FSWGRLQLL----------------KH--LKTLDLSHNQLT-TVPARLANcSKSLTKLILN 731
Cdd:PLN00113 310 LEILHLFSNNFTGkipvalTSLPRLQVLqlwsnkfsgeipknlgKHnnLTVLDLSTNNLTgEIPEGLCS-SGNLFKLILF 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 549439542 732 HNQI-----------RQLTKYFLED------------ALQLRY-LDISSNKIQ 760
Cdd:PLN00113 389 SNSLegeipkslgacRSLRRVRLQDnsfsgelpseftKLPLVYfLDISNNNLQ 441
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
204-258 |
2.41e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 2.41e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 549439542 204 NLKVLSLKDNNVTAVPTIL---PPNLLELYLYNNIIKRIQEDDFNKLSQLQVLDLSGN 258
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAfkgLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
165-406 |
2.69e-05 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 47.35 E-value: 2.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 165 ENLTELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLvmknlKVLSLKDNNV--TAVPTI------LPPNLLELYL-YNNI 235
Cdd:cd00116 75 QGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSL-----QELKLNNNGLgdRGLRLLakglkdLPPALEKLVLgRNRL 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 236 IKRIQED---DFNKLSQLQVLDLSGNCPRCYNVPYPCtpcennsplqiheNAFGSLTELKVLRLHSNSLQHVSAKW---- 308
Cdd:cd00116 150 EGASCEAlakALRANRDLKELNLANNGIGDAGIRALA-------------EGLKANCNLEVLDLNNNGLTDEGASAlaet 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 309 FKNMSNLQELDLSQNYL----AREIEEAkFLTSLPNLVQLDLSFNYELQVyhASITLPHSLSSLTKLKNLYIKG-YVFKE 383
Cdd:cd00116 217 LASLKSLEVLNLGDNNLtdagAAALASA-LLSPNISLLTLSLSCNDITDD--GAKDLAEVLAEKESLLELDLRGnKFGEE 293
|
250 260
....*....|....*....|....
gi 549439542 384 LKDSSLSVLH-KLPNLEVLDLGTN 406
Cdd:cd00116 294 GAQLLAESLLePGNELESLWVKDD 317
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
700-759 |
5.12e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 5.12e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 700 HLKTLDLSHNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKI 759
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
204-449 |
1.37e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 45.04 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 204 NLKVLSLKDNNVT-----AVPTILPPN--LLELYLYNNIIKRIQE------DDFNKLSQLQVLDLSgNCPRCYNVPYPCT 270
Cdd:cd00116 24 CLQVLRLEGNTLGeeaakALASALRPQpsLKELCLSLNETGRIPRglqsllQGLTKGCGLQELDLS-DNALGPDGCGVLE 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 271 PCENNSPLQI---HENAFG---------SLTE----LKVLRLHSNSLQHVS----AKWFKNMSNLQELDLSQNYL----A 326
Cdd:cd00116 103 SLLRSSSLQElklNNNGLGdrglrllakGLKDlppaLEKLVLGRNRLEGAScealAKALRANRDLKELNLANNGIgdagI 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 327 REIEEAkfLTSLPNLVQLDLSFNyelQVYHA-SITLPHSLSSLTKLKNLYIKGYVFK-----ELKDSSLSVLHKLpnlEV 400
Cdd:cd00116 183 RALAEG--LKANCNLEVLDLNNN---GLTDEgASALAETLASLKSLEVLNLGDNNLTdagaaALASALLSPNISL---LT 254
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 549439542 401 LDLGTNFIK----IADLNIFQQFENLKFIDLSVNKIS--PSEESREVGFCPNAQT 449
Cdd:cd00116 255 LSLSCNDITddgaKDLAEVLAEKESLLELDLRGNKFGeeGAQLLAESLLEPGNEL 309
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
604-762 |
1.39e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 45.69 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 604 NDNDISTSASRTMESESLRVLEFKGNHLDVLWRDGDNRYLDFFKNLLNLEELDISRNSLNSLPPGVFEGMPPNLTTLSLA 683
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 684 KNGLRSFSWGRLQLLKHLKTL-----------------DLSHNQLTTVPARLANCsKSLTKLILNHNQIRQLTKyFLEDA 746
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELdlsgneelsnltnleslDLSGNQLTDLPEELANL-TNLKELDLSNNQLTDLPE-PLGNL 158
|
170
....*....|....*.
gi 549439542 747 LQLRYLDISSNKIQVI 762
Cdd:COG4886 159 TNLKSLDLSNNQLTDL 174
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
639-764 |
1.77e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.01 E-value: 1.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 639 DNR--YLDFFKNLLNLEELDISRNSLNSLPPgvFEGMPpNLTTLSLAKNGLRSFSwGrLQLLKHLKTLDLSHNQL----- 711
Cdd:cd21340 33 DNKitKIENLEFLTNLTHLYLQNNQIEKIEN--LENLV-NLKKLYLGGNRISVVE-G-LENLTNLEELHIENQRLppgek 107
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 549439542 712 -TTVPARLANCSKSLTKLILNHNQIRQLTkyFLEDALQLRYLDISSNKIQVIQK 764
Cdd:cd21340 108 lTFDPRSLAALSNSLRVLNISGNNIDSLE--PLAPLRNLEQLDASNNQISDLEE 159
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
122-258 |
7.10e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 42.08 E-value: 7.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 122 FSGLSDLKSLYLDGNQLLEIpqdlpsslqllsleannifsitkENLTELVNIESLYLGQNC------------------- 182
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIEKI-----------------------ENLENLVNLKKLYLGGNRisvveglenltnleelhie 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 183 YYRNPCNVSYSIEKDA-FLVMKNLKVLSLKDNNVTAVPTILP-PNLLELYLYNNIIKRIQE--DDFNKLSQLQVLDLSGN 258
Cdd:cd21340 99 NQRLPPGEKLTFDPRSlAALSNSLRVLNISGNNIDSLEPLAPlRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
359-576 |
1.00e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 41.70 E-value: 1.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 359 ITLPHSLSSLTKLKNLYikgyvfkeLKD---SSLSVLHKLPNLEVLDLGTNFI-KIADLNifqQFENLKFIDLSVNKISP 434
Cdd:cd21340 14 ITKIDNLSLCKNLKVLY--------LYDnkiTKIENLEFLTNLTHLYLQNNQIeKIENLE---NLVNLKKLYLGGNRISV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 435 SEesrevGFcpnaqtsvdrHGPQVLEALHYfrydEYARscrfknkepptfLPLnadchtyGQTLDLSRNNIFFIKPSdfk 514
Cdd:cd21340 83 VE-----GL----------ENLTNLEELHI----ENQR------------LPP-------GEKLTFDPRSLAALSNS--- 121
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 549439542 515 hlsfLKCLNLSGNAIgQTLngSELQPLRELRYLDFSNNRLDLL--YSTAFEELQNLEILDLSSN 576
Cdd:cd21340 122 ----LRVLNISGNNI-DSL--EPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGN 178
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
498-631 |
1.39e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 41.96 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 498 LDLSRNNIF----FIKPSDFKHLSFLKCLNLSGNAIG----QTLnGSELQPLRELRYLDFSNNRL----DLLYSTAFEEL 565
Cdd:cd00116 142 LVLGRNRLEgascEALAKALRANRDLKELNLANNGIGdagiRAL-AEGLKANCNLEVLDLNNNGLtdegASALAETLASL 220
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 549439542 566 QNLEILDLSSNShyFQAEGITHMLN-FTKKLRHLEKLMMNDNDISTSASRTM-----ESESLRVLEFKGNHL 631
Cdd:cd00116 221 KSLEVLNLGDNN--LTDAGAAALASaLLSPNISLLTLSLSCNDITDDGAKDLaevlaEKESLLELDLRGNKF 290
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
639-765 |
2.24e-03 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 41.99 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 639 DNRYLDFFKNL-LNLEELDISRNSLNSLPpgvfEGMPPNLTTLSLAKNGLrsfswgrLQLLKHL----KTLDLSHNQLTT 713
Cdd:PRK15370 208 NNELKSLPENLqGNIKTLYANSNQLTSIP----ATLPDTIQEMELSINRI-------TELPERLpsalQSLDLFHNKISC 276
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 549439542 714 VPARLANcskSLTKLILNHNQIRQLTKYFLEDalqLRYLDISSNKIQVIQKT 765
Cdd:PRK15370 277 LPENLPE---ELRYLSVYDNSIRTLPAHLPSG---ITHLNVQSNSLTALPET 322
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
221-445 |
4.93e-03 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 40.54 E-value: 4.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 221 ILPPNLLELYLYNNIIKRIQEDDFNK----LSQLQVLDLSGNCPRCYNVPYPCTPCENNsplqihenafgslTELKVLRL 296
Cdd:COG5238 205 TQNTTVTTLWLKRNPIGDEGAEILAEalkgNKSLTTLDLSNNQIGDEGVIALAEALKNN-------------TTVETLYL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 297 HSNSLQHVS----AKWFKNMSNLQELDLSQNYLARE--IEEAKFLTSLPNLVQLDLSFNyelQVYHA-SITLPHSLSSLT 369
Cdd:COG5238 272 SGNQIGAEGaialAKALQGNTTLTSLDLSVNRIGDEgaIALAEGLQGNKTLHTLNLAYN---GIGAQgAIALAKALQENT 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 549439542 370 KLKNLYIKGyvfKELKDSSLSVLHKL----PNLEVLDLGTNFI---KIADLNIFQQFENLKFIDLSVNKISPSEESREVG 442
Cdd:COG5238 349 TLHSLDLSD---NQIGDEGAIALAKYlegnTTLRELNLGKNNIgkqGAEALIDALQTNRLHTLILDGNLIGAEAQQRLEQ 425
|
...
gi 549439542 443 FCP 445
Cdd:COG5238 426 LLE 428
|
|
| LRR |
smart00370 |
Leucine-rich repeats, outliers; |
649-672 |
6.65e-03 |
|
Leucine-rich repeats, outliers;
Pssm-ID: 197688 [Multi-domain] Cd Length: 24 Bit Score: 35.02 E-value: 6.65e-03
|
| LRR_TYP |
smart00369 |
Leucine-rich repeats, typical (most populated) subfamily; |
649-672 |
6.65e-03 |
|
Leucine-rich repeats, typical (most populated) subfamily;
Pssm-ID: 197687 [Multi-domain] Cd Length: 24 Bit Score: 35.02 E-value: 6.65e-03
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
542-608 |
7.30e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 7.30e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 549439542 542 RELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNShyfqaegITHMLNFT-KKLRHLEKLMMNDNDI 608
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNL-------LTTLSPGAfSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
510-577 |
7.39e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.18 E-value: 7.39e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 549439542 510 PSDFKHLSFLKCLNLSGNAIGQTLNGSeLQPLRELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNS 577
Cdd:PLN03150 435 PNDISKLRHLQSINLSGNSIRGNIPPS-LGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
724-767 |
8.71e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 8.71e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 549439542 724 SLTKLILNHNQIRQLTKYFLEDALQLRYLDISSNKIQVIQKTSF 767
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAF 45
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
224-258 |
9.86e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 34.91 E-value: 9.86e-03
10 20 30
....*....|....*....|....*....|....*
gi 549439542 224 PNLLELYLYNNIIKRIqeDDFNKLSQLQVLDLSGN 258
Cdd:pfam12799 1 PNLEVLDLSNNQITDI--PPLAKLPNLETLDLSGN 33
|
|
| |
