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Conserved domains on  [gi|5542132]
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Chain B, SUPEROXIDE DISMUTASE

Protein Classification

superoxide dismutase( domain architecture ID 11427369)

superoxide dismutase eliminates superoxide radicals by catalyzing their conversion into hydrogen peroxide and oxygen

EC:  1.15.1.1
Gene Ontology:  GO:0046872|GO:0004784

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SodA COG0605
Superoxide dismutase [Inorganic ion transport and metabolism];
4-194 2.10e-102

Superoxide dismutase [Inorganic ion transport and metabolism];


:

Pssm-ID: 440370 [Multi-domain]  Cd Length: 192  Bit Score: 293.19  E-value: 2.10e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    4 TLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKaDFGAI-----NKLEKDLAFNLAGHVNHSVF 78
Cdd:COG0605   1 ELPPLPYAYDALEPHISAETMELHHDKHHQAYVNNLNAALEGLAELEDK-SLEEIikklsEELKRALRNNAGGHWNHTLF 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132   79 WKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTlQFYDHQNNLPAGSIPLL 158
Cdd:COG0605  80 WENLSPNGGG--EPTGELAAAIEADFGSFDAFKEEFKAAAAGRFGSGWAWLVVDKDGKLEIV-STPNQDNPLMAGGTPLL 156

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 5542132  159 QLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALR 194
Cdd:COG0605 157 GLDVWEHAYYLDYQNRRPDYVDAFWNVVNWDFVEKR 192
 
Name Accession Description Interval E-value
SodA COG0605
Superoxide dismutase [Inorganic ion transport and metabolism];
4-194 2.10e-102

Superoxide dismutase [Inorganic ion transport and metabolism];


Pssm-ID: 440370 [Multi-domain]  Cd Length: 192  Bit Score: 293.19  E-value: 2.10e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    4 TLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKaDFGAI-----NKLEKDLAFNLAGHVNHSVF 78
Cdd:COG0605   1 ELPPLPYAYDALEPHISAETMELHHDKHHQAYVNNLNAALEGLAELEDK-SLEEIikklsEELKRALRNNAGGHWNHTLF 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132   79 WKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTlQFYDHQNNLPAGSIPLL 158
Cdd:COG0605  80 WENLSPNGGG--EPTGELAAAIEADFGSFDAFKEEFKAAAAGRFGSGWAWLVVDKDGKLEIV-STPNQDNPLMAGGTPLL 156

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 5542132  159 QLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALR 194
Cdd:COG0605 157 GLDVWEHAYYLDYQNRRPDYVDAFWNVVNWDFVEKR 192
PLN02471 PLN02471
superoxide dismutase [Mn]
 3-188 7.49e-65

superoxide dismutase [Mn]


Pssm-ID: 215262  Cd Length: 231  Bit Score: 199.75  E-value: 7.49e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNM 82
Cdd:PLN02471  31 FTLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNYNKALEQLDQAVEKGDASAVVKLQSAIKFNGGGHVNHSIFWKNL 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    83 AP-KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWaslVWDPLGKRINTLQFYDHQNNLP-----AGSIP 156
Cdd:PLN02471 111 APvSEGGGEPPHGSLGWAIDEHFGSLEALVKKMSAEGAAVQGSGW---VWLGLDKELKKLVVETTANQDPlvtkgPSLVP 187

                        170       180       190
                 ....*....|....*....|....*....|..
gi 5542132   157 LLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNW 188
Cdd:PLN02471 188 LLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNW 219
Superox_dis_Halo NF041312
superoxide dismutase;
5-198 9.26e-55

superoxide dismutase;


Pssm-ID: 469209  Cd Length: 196  Bit Score: 172.69  E-value: 9.26e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     5 LPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAP 84
Cdd:NF041312   2 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGLNSAEETLAENREAGDFSSTAGAMRNVTHNGSGHYLHTLFWENMSP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    85 KGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGiqGSGWASLVWDPLGKRINTLQFYDHQNNLPAGSIPLLQLDMWE 164
Cdd:NF041312  82 NGGG--EPEGDLADRIEEDFGSYEAWKGEFEAAAGA--AGGWALLVYDPVAKQLRNVAVDKHDQGALWGSHPILALDVWE 157

                        170       180       190
                 ....*....|....*....|....*....|....
gi 5542132   165 HAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEA 198
Cdd:NF041312 158 HSYYYDYGPDRGSFVDAFFEVVDWDEVADEYETV 191
Sod_Fe_C pfam02777
Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze ...
 92-194 1.23e-52

Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.


Pssm-ID: 460691  Cd Length: 102  Bit Score: 164.14  E-value: 1.23e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     92 PTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTlQFYDHQNNLPAGSIPLLQLDMWEHAFYLQY 171
Cdd:pfam02777   1 PTGALAEAIEKDFGSFDAFKEEFNAAAAGVFGSGWAWLVYDPDGKLEIV-TTPNQDNPLTDGLTPLLGLDVWEHAYYLDY 79

                          90       100
                  ....*....|....*....|...
gi 5542132    172 KNVKGDYVKSWWNVVNWDDVALR 194
Cdd:pfam02777  80 QNRRADYVKAFWNVVNWDEVEKR 102
 
Name Accession Description Interval E-value
SodA COG0605
Superoxide dismutase [Inorganic ion transport and metabolism];
4-194 2.10e-102

Superoxide dismutase [Inorganic ion transport and metabolism];


Pssm-ID: 440370 [Multi-domain]  Cd Length: 192  Bit Score: 293.19  E-value: 2.10e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    4 TLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKaDFGAI-----NKLEKDLAFNLAGHVNHSVF 78
Cdd:COG0605   1 ELPPLPYAYDALEPHISAETMELHHDKHHQAYVNNLNAALEGLAELEDK-SLEEIikklsEELKRALRNNAGGHWNHTLF 79

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132   79 WKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTlQFYDHQNNLPAGSIPLL 158
Cdd:COG0605  80 WENLSPNGGG--EPTGELAAAIEADFGSFDAFKEEFKAAAAGRFGSGWAWLVVDKDGKLEIV-STPNQDNPLMAGGTPLL 156

                       170       180       190
                ....*....|....*....|....*....|....*.
gi 5542132  159 QLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALR 194
Cdd:COG0605 157 GLDVWEHAYYLDYQNRRPDYVDAFWNVVNWDFVEKR 192
PLN02471 PLN02471
superoxide dismutase [Mn]
 3-188 7.49e-65

superoxide dismutase [Mn]


Pssm-ID: 215262  Cd Length: 231  Bit Score: 199.75  E-value: 7.49e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNM 82
Cdd:PLN02471  31 FTLPDLPYDYGALEPAISGEIMQLHHQKHHQTYVTNYNKALEQLDQAVEKGDASAVVKLQSAIKFNGGGHVNHSIFWKNL 110

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    83 AP-KGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWaslVWDPLGKRINTLQFYDHQNNLP-----AGSIP 156
Cdd:PLN02471 111 APvSEGGGEPPHGSLGWAIDEHFGSLEALVKKMSAEGAAVQGSGW---VWLGLDKELKKLVVETTANQDPlvtkgPSLVP 187

                        170       180       190
                 ....*....|....*....|....*....|..
gi 5542132   157 LLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNW 188
Cdd:PLN02471 188 LLGIDVWEHAYYLQYKNVRPDYLKNIWKVMNW 219
Superox_dis_Halo NF041312
superoxide dismutase;
5-198 9.26e-55

superoxide dismutase;


Pssm-ID: 469209  Cd Length: 196  Bit Score: 172.69  E-value: 9.26e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     5 LPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAP 84
Cdd:NF041312   2 LPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGLNSAEETLAENREAGDFSSTAGAMRNVTHNGSGHYLHTLFWENMSP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    85 KGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGiqGSGWASLVWDPLGKRINTLQFYDHQNNLPAGSIPLLQLDMWE 164
Cdd:NF041312  82 NGGG--EPEGDLADRIEEDFGSYEAWKGEFEAAAGA--AGGWALLVYDPVAKQLRNVAVDKHDQGALWGSHPILALDVWE 157

                        170       180       190
                 ....*....|....*....|....*....|....
gi 5542132   165 HAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEA 198
Cdd:NF041312 158 HSYYYDYGPDRGSFVDAFFEVVDWDEVADEYETV 191
Sod_Fe_C pfam02777
Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze ...
 92-194 1.23e-52

Iron/manganese superoxide dismutases, C-terminal domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.


Pssm-ID: 460691  Cd Length: 102  Bit Score: 164.14  E-value: 1.23e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     92 PTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTlQFYDHQNNLPAGSIPLLQLDMWEHAFYLQY 171
Cdd:pfam02777   1 PTGALAEAIEKDFGSFDAFKEEFNAAAAGVFGSGWAWLVYDPDGKLEIV-TTPNQDNPLTDGLTPLLGLDVWEHAYYLDY 79

                          90       100
                  ....*....|....*....|...
gi 5542132    172 KNVKGDYVKSWWNVVNWDDVALR 194
Cdd:pfam02777  80 QNRRADYVKAFWNVVNWDEVEKR 102
PRK10925 PRK10925
superoxide dismutase [Mn];
3-199 3.10e-50

superoxide dismutase [Mn];


Pssm-ID: 182843  Cd Length: 206  Bit Score: 161.63  E-value: 3.10e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLA-------FNLAGHVNH 75
Cdd:PRK10925   3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQLPAdkktvlrNNAGGHANH 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    76 SVFWKNMApKGSAPERPtdeLGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDplGKRINTLQFYDHQNNLPAGSI 155
Cdd:PRK10925  83 SLFWKGLK-KGTTLQGD---LKAAIERDFGSVDNFKAEFEKAAATRFGSGWAWLVLK--GDKLAVVSTANQDSPLMGEAI 156

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 5542132   156 ------PLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEAR 199
Cdd:PRK10925 157 sgasgfPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK 206
PTZ00078 PTZ00078
Superoxide dismutase [Fe]; Provisional
 6-198 6.33e-42

Superoxide dismutase [Fe]; Provisional


Pssm-ID: 185432 [Multi-domain]  Cd Length: 193  Bit Score: 139.92  E-value: 6.33e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     6 PELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLA------EARDKADFGAInklekdlaFNLAGHV-NHSVF 78
Cdd:PTZ00078   1 PKLPYGLKELSPHLSEETLKFHYSKHHAGYVNKLNGLIKGTPlenktlEELIKEYSGAV--------FNNAAQIwNHNFY 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    79 WKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKrINTLQFYDHQNNLPAGS-IPL 157
Cdd:PTZ00078  73 WLSMGPNGGG--EPTGEIKEKIDEKFGSFDNFKNEFSNVLSGHFGSGWGWLVLKNDGK-LEIVQTHDAGNPIKDNTgKPL 149

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 5542132   158 LQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEA 198
Cdd:PTZ00078 150 LTCDIWEHAYYIDYRNDRASYVNSWWNKVNWDFANKNLKKL 190
Sod_Fe_N pfam00081
Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) ...
 3-83 2.77e-41

Iron/manganese superoxide dismutases, alpha-hairpin domain; superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. N-terminal domain is a long alpha antiparallel hairpin. A small fragment of YTRE_LEPBI matches well - sequencing error?


Pssm-ID: 425457  Cd Length: 82  Bit Score: 134.36  E-value: 2.77e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132      3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWKNM 82
Cdd:pfam00081   2 YELPDLPYAYDALEPHISKETMEIHHTKHHQTYVNNLNAALEGLEEARKPLEELIIKALLGGLFNNGGGHWNHSLFWKNL 81


                  .
gi 5542132     83 A 83
Cdd:pfam00081  82 S 82
PLN02622 PLN02622
iron superoxide dismutase
 1-198 2.18e-40

iron superoxide dismutase


Pssm-ID: 166263 [Multi-domain]  Cd Length: 261  Bit Score: 138.22  E-value: 2.18e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     1 AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDK-------LAEARDKADFGAINKLEKdlaFNLAGHV 73
Cdd:PLN02622  46 AYYGLKTPPYPLDALEPYMSRRTLEVHWGEHHRGYVEGLNKQLAKddilygyTMDELVKVTYNNGNPLPE---FNNAAQV 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    74 -NHSVFWKNMAPKGSapERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNLPA 152
Cdd:PLN02622 123 wNHDFFWESMQPGGG--DMPELGVLEQIEKDFGSFTNFREKFTEAALTLFGSGWVWLVLKREERRLEVVKTSNAINPLVW 200

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 5542132   153 GSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWN-VVNWDDVALRFSEA 198
Cdd:PLN02622 201 DDIPIICLDVWEHAYYLDYKNDRGKYVNAFMNhLVSWNAAMARMARA 247
PRK10543 PRK10543
superoxide dismutase [Fe];
3-196 3.91e-38

superoxide dismutase [Fe];


Pssm-ID: 182534  Cd Length: 193  Bit Score: 130.07  E-value: 3.91e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     3 YTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTaLDKLAEARDKAdFGAINKLEKDLAFNLAGHV-NHSVFWKN 81
Cdd:PRK10543   3 FELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNN-LIKGTAFEGKS-LEEIVRSSEGGVFNNAAQVwNHTFYWNC 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    82 MAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKrINTLQFYDHQNNLPAGSIPLLQLD 161
Cdd:PRK10543  81 LAPNAGG--EPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNADGK-LAIVSTSNAGTPLTTDATPLLTVD 157

                        170       180       190
                 ....*....|....*....|....*....|....*
gi 5542132   162 MWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFS 196
Cdd:PRK10543 158 VWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLA 192
PLN02685 PLN02685
iron superoxide dismutase
 1-199 2.41e-33

iron superoxide dismutase


Pssm-ID: 215369  Cd Length: 299  Bit Score: 120.88  E-value: 2.41e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     1 AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGAN-----TALDKLaeARDKADFGAINKLEKDLAFNLAGHV-N 74
Cdd:PLN02685  45 AKFELKPPPYPLDALEPHMSRETLEYHWGKHHRAYVDNLNkqivgTELDGM--SLEDVVLITYNKGDMLPAFNNAAQAwN 122

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    75 HSVFWKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVW-----------DPL----GKRIN 139
Cdd:PLN02685 123 HEFFWESMKPGGGG--KPSGELLQLIERDFGSFERFVEEFKSAAATQFGSGWAWLAYkanrldvgnavNPCpseeDKKLV 200

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 5542132   140 TLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWW-NVVNWDDVALRFSEAR 199
Cdd:PLN02685 201 VVKSPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISTFMeKLVSWEAVSARLESAK 261
PLN02184 PLN02184
superoxide dismutase [Fe]
 1-201 5.00e-31

superoxide dismutase [Fe]


Pssm-ID: 177838  Cd Length: 212  Bit Score: 112.53  E-value: 5.00e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132     1 AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDG-ANTALDKLAEAR--DKADFGAINKLEKDLAFNLAGHV-NHS 76
Cdd:PLN02184   9 ANYVLKPPPFALDALEPHMSKQTLEFHWGKHHRAYVDNlKKQVLGTELEGKplEHIIHSTYNNGDLLPAFNNAAQAwNHE 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5542132    77 VFWKNMAPKGSApeRPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWdpLGKRINTLQFYDHQNNLPAGSIP 156
Cdd:PLN02184  89 FFWESMKPGGGG--KPSGELLALLERDFTSYEKFYEEFNAAAATQFGAGWAWLAY--SNEKLKVVKTPNAVNPLVLGSFP 164

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 5542132   157 LLQLDMWEHAFYLQYKNVKGDYVKSWW-NVVNWDDVALRFSEARVA 201
Cdd:PLN02184 165 LLTIDVWEHAYYLDFQNRRPDYIKTFMtNLVSWEAVSARLEAAKAA 210
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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