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centrosome-associated protein 350 isoform X9 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2487-2551
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909734 2487 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2551
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
NIP100 super family
cl34954 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2487-2764
1.18e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
COG5244 :Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2487 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2566
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2567 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2642
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2643 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2721
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909734 2722 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2764
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121 super family
cl31754 MAEBL; Provisional
1564-2291
2.08e-06
MAEBL; Provisional
PTZ00121 :Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.99
E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1564 E SSV D EQLQTA A DDSLRSDS I PSLPDEKDSTSIATEYSL K FD E SMTE DE I ---- E E K SFRSLLPS E SHRRFNME KK RGHH 1639
Cdd:PTZ00121 1234 E AKK D AEEAKK A EEERNNEE I RKFEEARMAHFARRQAAI K AE E ARKA DE L kkae E K K KADEAKKA E EKKKADEA KK KAEE 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1640 DDSDED A S pd K T A LSST K E lsmpfsgg Q D SFS K FTM E MVR -- QYM K E E EVR AA HQSSLLRLREK A LKE K TKAELAWLEHQ 1717
Cdd:PTZ00121 1314 AKKADE A K -- K K A EEAK K K -------- A D AAK K KAE E AKK aa EAA K A E AEA AA DEAEAAEEKAE A AEK K KEEAKKKADAA 1383
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1718 KK HLRD K GED D KMPPLRKKQRGLLLR L QQEK A EI K RLQ EA N K A A RKERQ lilkq QE E IERIRQTTI K LQ E KL K S A G E K K L 1797
Cdd:PTZ00121 1384 KK KAEE K KKA D EAKKKAEEDKKKADE L KKAA A AK K KAD EA K K K A EEKKK ----- AD E AKKKAEEAK K AD E AK K K A E E A K K 1458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1798 GSL A DDDEA E DN KA ASPGPPGL E TRSPSPISISSS E TSSIMQKL K smrs RMD E KFLTKR E Q K LMQRRQH A E E LLEWKRRL 1877
Cdd:PTZ00121 1459 AEE A KKKAE E AK KA DEAKKKAE E AKKADEAKKKAE E AKKKADEA K ---- KAA E AKKKAD E A K KAEEAKK A D E AKKAEEAK 1534
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1878 D A E EA EIQQME K Q A laawd K EL V K PRTP KK EQ E SQRT E QKGI A S E E gspm PSYSP R NS E scipedlgspsdlcvps EA R v 1957
Cdd:PTZ00121 1535 K A D EA KKAEEK K K A ----- D EL K K AEEL KK AE E KKKA E EAKK A E E D ---- KNMAL R KA E ----------------- EA K - 1587
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1958 Q A QPGSP E HSTLTE E MVFSQEL E STSPSKHSPP K SCLSMSKQ E SS K ASHRTEGHCHLPV K SHQPCYSWSD E SLSMTQS E T 2037
Cdd:PTZ00121 1588 K A EEARI E EVMKLY E EEKKMKA E EAKKAEEAKI K AEELKKAE E EK K KVEQLKKKEAEEK K KAEELKKAEE E NKIKAAE E A 1667
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2038 TSDQS D IEGRIR A L K D E LRKR K SVVEQL K REQRKRQK E R LK AQ EA SLLRQL E T ydef I KK T E G E lsqdldispt S K FQMK 2117
Cdd:PTZ00121 1668 KKAEE D KKKAEE A K K A E EDEK K AAEALK K EAEEAKKA E E LK KK EA EEKKKA E E ---- L KK A E E E ---------- N K IKAE 1733
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2118 TLSSVS E KP K I K PHPLHRS E TA K TWKSVTES E RSRGSLASIA E hvdsslsc S E RA I S E RSLSAYA KR GV E L D SR I EHLQA 2197
Cdd:PTZ00121 1734 EAKKEA E ED K K K AEEAKKD E EE K KKIAHLKK E EEKKAEEIRK E -------- K E AV I E E ELDEEDE KR RM E V D KK I KDIFD 1805
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2198 SSPDL ssrkaqte SRDSL E SAPSLSPV KE L napd RIYDVS E AKAEDTS Q KS E IQEI E SM K LESSEV -- ED ACCKQSGGS E 2275
Cdd:PTZ00121 1806 NFANI -------- IEGGK E GNLVINDS KE M ---- EDSAIK E VADSKNM Q LE E ADAF E KH K FNKNNE ng ED GNKEADFNK E 1873
730
....*....|....*.
gi 568909734 2276 VL LK L D LAS E TLSSK E 2291
Cdd:PTZ00121 1874 KD LK E D DEE E IEEAD E 1889
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2487-2551
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909734 2487 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2551
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
CAP_GLY
smart01052 Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ...
2487-2552
7.31e-26
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain]
Cd Length: 68
Bit Score: 102.66
E-value: 7.31e-26
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909734 2487 I GDRV LI - G SVQP GT L R FK G E T D FA K G F W A GVELD K P E - G N N N G TYD G IV YF V C KD KHGIF AP P Q K IS 2552
Cdd:smart01052 1 V GDRV EV g G GGRR GT V R YV G P T P FA P G V W V GVELD E P L r G K N D G SVK G VR YF E C PP KHGIF VR P S K VE 68
NIP100
COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2487-2764
1.18e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2487 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2566
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2567 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2642
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2643 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2721
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909734 2722 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2764
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121
PTZ00121 MAEBL; Provisional
1564-2291
2.08e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.99
E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1564 E SSV D EQLQTA A DDSLRSDS I PSLPDEKDSTSIATEYSL K FD E SMTE DE I ---- E E K SFRSLLPS E SHRRFNME KK RGHH 1639
Cdd:PTZ00121 1234 E AKK D AEEAKK A EEERNNEE I RKFEEARMAHFARRQAAI K AE E ARKA DE L kkae E K K KADEAKKA E EKKKADEA KK KAEE 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1640 DDSDED A S pd K T A LSST K E lsmpfsgg Q D SFS K FTM E MVR -- QYM K E E EVR AA HQSSLLRLREK A LKE K TKAELAWLEHQ 1717
Cdd:PTZ00121 1314 AKKADE A K -- K K A EEAK K K -------- A D AAK K KAE E AKK aa EAA K A E AEA AA DEAEAAEEKAE A AEK K KEEAKKKADAA 1383
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1718 KK HLRD K GED D KMPPLRKKQRGLLLR L QQEK A EI K RLQ EA N K A A RKERQ lilkq QE E IERIRQTTI K LQ E KL K S A G E K K L 1797
Cdd:PTZ00121 1384 KK KAEE K KKA D EAKKKAEEDKKKADE L KKAA A AK K KAD EA K K K A EEKKK ----- AD E AKKKAEEAK K AD E AK K K A E E A K K 1458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1798 GSL A DDDEA E DN KA ASPGPPGL E TRSPSPISISSS E TSSIMQKL K smrs RMD E KFLTKR E Q K LMQRRQH A E E LLEWKRRL 1877
Cdd:PTZ00121 1459 AEE A KKKAE E AK KA DEAKKKAE E AKKADEAKKKAE E AKKKADEA K ---- KAA E AKKKAD E A K KAEEAKK A D E AKKAEEAK 1534
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1878 D A E EA EIQQME K Q A laawd K EL V K PRTP KK EQ E SQRT E QKGI A S E E gspm PSYSP R NS E scipedlgspsdlcvps EA R v 1957
Cdd:PTZ00121 1535 K A D EA KKAEEK K K A ----- D EL K K AEEL KK AE E KKKA E EAKK A E E D ---- KNMAL R KA E ----------------- EA K - 1587
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1958 Q A QPGSP E HSTLTE E MVFSQEL E STSPSKHSPP K SCLSMSKQ E SS K ASHRTEGHCHLPV K SHQPCYSWSD E SLSMTQS E T 2037
Cdd:PTZ00121 1588 K A EEARI E EVMKLY E EEKKMKA E EAKKAEEAKI K AEELKKAE E EK K KVEQLKKKEAEEK K KAEELKKAEE E NKIKAAE E A 1667
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2038 TSDQS D IEGRIR A L K D E LRKR K SVVEQL K REQRKRQK E R LK AQ EA SLLRQL E T ydef I KK T E G E lsqdldispt S K FQMK 2117
Cdd:PTZ00121 1668 KKAEE D KKKAEE A K K A E EDEK K AAEALK K EAEEAKKA E E LK KK EA EEKKKA E E ---- L KK A E E E ---------- N K IKAE 1733
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2118 TLSSVS E KP K I K PHPLHRS E TA K TWKSVTES E RSRGSLASIA E hvdsslsc S E RA I S E RSLSAYA KR GV E L D SR I EHLQA 2197
Cdd:PTZ00121 1734 EAKKEA E ED K K K AEEAKKD E EE K KKIAHLKK E EEKKAEEIRK E -------- K E AV I E E ELDEEDE KR RM E V D KK I KDIFD 1805
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2198 SSPDL ssrkaqte SRDSL E SAPSLSPV KE L napd RIYDVS E AKAEDTS Q KS E IQEI E SM K LESSEV -- ED ACCKQSGGS E 2275
Cdd:PTZ00121 1806 NFANI -------- IEGGK E GNLVINDS KE M ---- EDSAIK E VADSKNM Q LE E ADAF E KH K FNKNNE ng ED GNKEADFNK E 1873
730
....*....|....*.
gi 568909734 2276 VL LK L D LAS E TLSSK E 2291
Cdd:PTZ00121 1874 KD LK E D DEE E IEEAD E 1889
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
1679-1923
1.06e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1679 R QYMK E E E VRA A HQSS L LRLR E KALK E KTKA E LAWL E HQKKHLRDKG E DDK mpp LRKKQRG LL LR L QQEKAE I K RL Q E AN 1758
Cdd:COG1196 235 R ELEA E L E ELE A ELEE L EAEL E ELEA E LAEL E AELE E LRLELEELEL E LEE --- AQAEEYE LL AE L ARLEQD I A RL E E RR 311
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1759 KAARKERQ ---- LILKQQ EE I E RIRQTTIK L Q E K L KS A G E KKLGSL A DDD EAE DNKAA spgppg L E TRSPSPISISSSET 1834
Cdd:COG1196 312 RELEERLE elee ELAELE EE L E ELEEELEE L E E E L EE A E E ELEEAE A ELA EAE EALLE ------ A E AELAEAEEELEELA 385
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1835 SSIMQK L KSMRS - RMDEKF L TKR E QK L MQ R R - QHA EEL L E WKRR L DAE E A E IQQM E KQALA A WDK E L vkprtpk KEQ E SQ 1912
Cdd:COG1196 386 EELLEA L RAAAE l AAQLEE L EEA E EA L LE R L e RLE EEL E E LEEA L AEL E E E EEEE E EALEE A AEE E A ------- ELE E EE 458
250
....*....|.
gi 568909734 1913 RTEQKGI A SEE 1923
Cdd:COG1196 459 EALLELL A ELL 469
SCP-1
pfam05483 Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ...
1359-1792
8.37e-03
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain]
Cd Length: 787
Bit Score: 42.02
E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1359 SL AQIIKAQ QQR H E RD --- L ALLKLKAEQEAL E CQRQLEETR NK ta Q V HA E S L QQVVKSQREV --- TEVLQEATCKIAAQ 1432
Cdd:pfam05483 360 SL EELLRTE QQR L E KN edq L KIITMELQKKSS E LEEMTKFKN NK -- E V EL E E L KKILAEDEKL lde KKQFEKIAEELKGK 437
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1433 QS E TAR L TTDAARQ I CEM a E LTR T hlad AI T TS gvplatlydhq RQ H FPDFMRK L R T KA E TDRISHSASHSQSKEGAVDS 1512
Cdd:pfam05483 438 EQ E LIF L LQAREKE I HDL - E IQL T ---- AI K TS ----------- EE H YLKEVED L K T EL E KEKLKNIELTAHCDKLLLEN 501
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1513 K RQ kfsp SRDSYSESSRY K S H DYRSSGSSR Q DS --- PSVPPSK E N E KPFHG E k M ES SVD E QL Q TAADDSLRS D SIPSLPD 1589
Cdd:pfam05483 502 K EL ---- TQEASDMTLEL K K H QEDIINCKK Q EE rml KQIENLE E K E MNLRD E - L ES VRE E FI Q KGDEVKCKL D KSEENAR 576
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1590 EKDSTSIAT E YSL K FD E SMTEDEIEEKSFRSLLPS E S H RRFNME KK R G HHDDSDED A SPD K T alsst KE L SMPFSGGQDS 1669
Cdd:pfam05483 577 SIEYEVLKK E KQM K IL E NKCNNLKKQIENKNKNIE E L H QENKAL KK K G SAENKQLN A YEI K V ----- NK L ELELASAKQK 651
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1670 F S kftm E MVRQ Y M KE E E VRAAHQSS LL RLR EKA --- LK E KT K ------------- AE LAW L EHQK KH lrdkg ED DK MPPL 1733
Cdd:pfam05483 652 F E ---- E IIDN Y Q KE I E DKKISEEK LL EEV EKA kai AD E AV K lqkeidkrcqhki AE MVA L MEKH KH ----- QY DK IIEE 722
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568909734 1734 R KKQR GL LLRLQ QE KAEI K RLQ E ANKAAR K ERQ L I LK Q Q E EIE RIRQTTI K LQE K LKS A 1792
Cdd:pfam05483 723 R DSEL GL YKNKE QE QSSA K AAL E IELSNI K AEL L S LK K Q L EIE KEEKEKL K MEA K ENT A 781
Name
Accession
Description
Interval
E-value
CAP_GLY
pfam01302 CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ...
2487-2551
1.74e-29
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain]
Cd Length: 65
Bit Score: 112.88
E-value: 1.74e-29
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568909734 2487 I GDRV LIGSVQP GT L R FK G ETD FA K G F W A GVELD K P E G N N N G TYD G IV YF V C KD KHG I F AP P Q K I 2551
Cdd:pfam01302 1 V GDRV EVPGGRR GT V R YV G PVP FA P G V W V GVELD E P V G K N D G SVK G VR YF E C PP KHG V F VR P S K V 65
CAP_GLY
smart01052 Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ...
2487-2552
7.31e-26
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain]
Cd Length: 68
Bit Score: 102.66
E-value: 7.31e-26
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909734 2487 I GDRV LI - G SVQP GT L R FK G E T D FA K G F W A GVELD K P E - G N N N G TYD G IV YF V C KD KHGIF AP P Q K IS 2552
Cdd:smart01052 1 V GDRV EV g G GGRR GT V R YV G P T P FA P G V W V GVELD E P L r G K N D G SVK G VR YF E C PP KHGIF VR P S K VE 68
NIP100
COG5244 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ...
2487-2764
1.18e-13
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain]
Cd Length: 669
Bit Score: 77.03
E-value: 1.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2487 IG DRVL I G S v QP GT L RF K G E T D F AK G F W A G V ELD K P E G N N N G TYD G IV YF V CK DK HGIF AP P QKI S H L LE N FDDTD I NED 2566
Cdd:COG5244 6 VN DRVL L G D - KF GT V RF I G K T K F KD G I W I G L ELD D P V G K N D G SVN G VR YF H CK KR HGIF IR P DDD S L L NG N AAYEK I KGG 84
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2567 EESY S DEQYQPYNQE Q KDIKCLKDR E NNIAEYFC E KSLPSMHNTDASVDKD R SL N I E T D TSEVL -- E VHGHQQ P SVDP -- 2642
Cdd:COG5244 85 LVCE S KGMDKDGEIK Q ENHEDRIHF E ESKIRRLE E TIEALKSTEKEEIVEL R RE N E E L D KINLS lr E RISSEE P ELNK dg 164
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2643 - LI SY K E N K VL V SDATES V paaagaat S D NTFSGESKQQQ L AEKEENFY S Q V L E KPSTPLL D L L TREKNQ L EAQLKSSIS 2721
Cdd:COG5244 165 s KL SY D E L K EF V EESRVQ V -------- Y D MVELVSDISET L NRNGSIQR S S V R E CERSNIH D V L FLVNGI L DGVIDELNG 236
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 568909734 2722 E EKKSKQ QL ET ------ VSLLTD S L L QVFVKDTV S QLQQ V KKARN E KI Q 2764
Cdd:COG5244 237 E LERLRR QL VS lmsshg IEVEEN S R L KATLEKFQ S LELK V NTLQE E LY Q 285
PTZ00121
PTZ00121 MAEBL; Provisional
1564-2291
2.08e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.99
E-value: 2.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1564 E SSV D EQLQTA A DDSLRSDS I PSLPDEKDSTSIATEYSL K FD E SMTE DE I ---- E E K SFRSLLPS E SHRRFNME KK RGHH 1639
Cdd:PTZ00121 1234 E AKK D AEEAKK A EEERNNEE I RKFEEARMAHFARRQAAI K AE E ARKA DE L kkae E K K KADEAKKA E EKKKADEA KK KAEE 1313
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1640 DDSDED A S pd K T A LSST K E lsmpfsgg Q D SFS K FTM E MVR -- QYM K E E EVR AA HQSSLLRLREK A LKE K TKAELAWLEHQ 1717
Cdd:PTZ00121 1314 AKKADE A K -- K K A EEAK K K -------- A D AAK K KAE E AKK aa EAA K A E AEA AA DEAEAAEEKAE A AEK K KEEAKKKADAA 1383
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1718 KK HLRD K GED D KMPPLRKKQRGLLLR L QQEK A EI K RLQ EA N K A A RKERQ lilkq QE E IERIRQTTI K LQ E KL K S A G E K K L 1797
Cdd:PTZ00121 1384 KK KAEE K KKA D EAKKKAEEDKKKADE L KKAA A AK K KAD EA K K K A EEKKK ----- AD E AKKKAEEAK K AD E AK K K A E E A K K 1458
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1798 GSL A DDDEA E DN KA ASPGPPGL E TRSPSPISISSS E TSSIMQKL K smrs RMD E KFLTKR E Q K LMQRRQH A E E LLEWKRRL 1877
Cdd:PTZ00121 1459 AEE A KKKAE E AK KA DEAKKKAE E AKKADEAKKKAE E AKKKADEA K ---- KAA E AKKKAD E A K KAEEAKK A D E AKKAEEAK 1534
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1878 D A E EA EIQQME K Q A laawd K EL V K PRTP KK EQ E SQRT E QKGI A S E E gspm PSYSP R NS E scipedlgspsdlcvps EA R v 1957
Cdd:PTZ00121 1535 K A D EA KKAEEK K K A ----- D EL K K AEEL KK AE E KKKA E EAKK A E E D ---- KNMAL R KA E ----------------- EA K - 1587
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1958 Q A QPGSP E HSTLTE E MVFSQEL E STSPSKHSPP K SCLSMSKQ E SS K ASHRTEGHCHLPV K SHQPCYSWSD E SLSMTQS E T 2037
Cdd:PTZ00121 1588 K A EEARI E EVMKLY E EEKKMKA E EAKKAEEAKI K AEELKKAE E EK K KVEQLKKKEAEEK K KAEELKKAEE E NKIKAAE E A 1667
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2038 TSDQS D IEGRIR A L K D E LRKR K SVVEQL K REQRKRQK E R LK AQ EA SLLRQL E T ydef I KK T E G E lsqdldispt S K FQMK 2117
Cdd:PTZ00121 1668 KKAEE D KKKAEE A K K A E EDEK K AAEALK K EAEEAKKA E E LK KK EA EEKKKA E E ---- L KK A E E E ---------- N K IKAE 1733
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2118 TLSSVS E KP K I K PHPLHRS E TA K TWKSVTES E RSRGSLASIA E hvdsslsc S E RA I S E RSLSAYA KR GV E L D SR I EHLQA 2197
Cdd:PTZ00121 1734 EAKKEA E ED K K K AEEAKKD E EE K KKIAHLKK E EEKKAEEIRK E -------- K E AV I E E ELDEEDE KR RM E V D KK I KDIFD 1805
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2198 SSPDL ssrkaqte SRDSL E SAPSLSPV KE L napd RIYDVS E AKAEDTS Q KS E IQEI E SM K LESSEV -- ED ACCKQSGGS E 2275
Cdd:PTZ00121 1806 NFANI -------- IEGGK E GNLVINDS KE M ---- EDSAIK E VADSKNM Q LE E ADAF E KH K FNKNNE ng ED GNKEADFNK E 1873
730
....*....|....*.
gi 568909734 2276 VL LK L D LAS E TLSSK E 2291
Cdd:PTZ00121 1874 KD LK E D DEE E IEEAD E 1889
PTZ00121
PTZ00121 MAEBL; Provisional
1676-2428
3.94e-06
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 53.22
E-value: 3.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1676 E MV R QYMK E --- EE V R A A HQSSLLRLRE KA LKE K TK AE L A WLEHQKKHLRD -- K G E DDK M PPLRKK Q RGLLLRLQQEKA E 1750
Cdd:PTZ00121 1203 E AA R KAEE E rka EE A R K A EDAKKAEAVK KA EEA K KD AE E A KKAEEERNNEE ir K F E EAR M AHFARR Q AAIKAEEARKAD E 1282
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1751 I K RLQ E AN KA ARKERQLIL K QQE E IERIRQTTI K LQ E KL K S A G E K K LGSL A DDDE AE DN K A A S pgppgl E TRSPSPISIS 1830
Cdd:PTZ00121 1283 L K KAE E KK KA DEAKKAEEK K KAD E AKKKAEEAK K AD E AK K K A E E A K KKAD A AKKK AE EA K K A A ------ E AAKAEAEAAA 1356
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1831 SSETSSIMQKLKSMRSRMDE K FLTKREQ K LMQRRQH A E E L lew K RRLDAEEAEIQQME K Q A L A AWDKELV K prtp KK EQ E 1910
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEA K KKADAAK K KAEEKKK A D E A --- K KKAEEDKKKADELK K A A A A KKKADEA K ---- KK AE E 1429
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1911 SQRTEQKGIAS EE GSPMPSYSPRNS E SCIP E DLGSPSD lcvps EA RVQAQPGSPEHSTLTEEMVFSQEL E STSPSKHSPP 1990
Cdd:PTZ00121 1430 KKKADEAKKKA EE AKKADEAKKKAE E AKKA E EAKKKAE ----- EA KKADEAKKKAEEAKKADEAKKKAE E AKKKADEAKK 1504
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1991 KSCLSMSKQ E SS KA SHRTE ghchlpvkshqpcysw S DE SLSMTQSETTSDQSDI E GRIR A lk DEL R K rksv V E Q LK REQR 2070
Cdd:PTZ00121 1505 AAEAKKKAD E AK KA EEAKK ---------------- A DE AKKAEEAKKADEAKKA E EKKK A -- DEL K K ---- A E E LK KAEE 1562
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2071 K RQK E RL K AQ E ASLLRQ L ETYD E FI K KT E GELSQDLDISPTS K FQMKTLSSVS E KP KIK PHP L HRS E TA K tw K S V TESER 2150
Cdd:PTZ00121 1563 K KKA E EA K KA E EDKNMA L RKAE E AK K AE E ARIEEVMKLYEEE K KMKAEEAKKA E EA KIK AEE L KKA E EE K -- K K V EQLKK 1640
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2151 SRGSLASI AE HVDSSL sc S E RA I SERSL say AK RGV E LDSRI E HLQASSP D ls SR KA QTESRDSL E S A PSLSPV K ELN A P 2230
Cdd:PTZ00121 1641 KEAEEKKK AE ELKKAE -- E E NK I KAAEE --- AK KAE E DKKKA E EAKKAEE D -- EK KA AEALKKEA E E A KKAEEL K KKE A E 1713
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2231 DR iydvse A KAE DTSQKS E IQE I ESMKLESSEV ED A cckqsggsevllkl DL A S E TLSSK E LPSDS A NVQQDLD K P A T E T 2310
Cdd:PTZ00121 1714 EK ------ K KAE ELKKAE E ENK I KAEEAKKEAE ED K -------------- KK A E E AKKDE E EKKKI A HLKKEEE K K A E E I 1773
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2311 SH EKE EALK E ------ DQSNHST D DRSP DI QSAGGIPEQ G CR E sgdstcs G Q L SV pkes SY S EDF E V S SFRKGISADEIS 2384
Cdd:PTZ00121 1774 RK EKE AVIE E eldeed EKRRMEV D KKIK DI FDNFANIIE G GK E ------- G N L VI ---- ND S KEM E D S AIKEVADSKNMQ 1842
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 568909734 2385 KDDSEGSSPSSLR K DSQSHR D RSQLTRSSRSRATGSGSD EEI S E 2428
Cdd:PTZ00121 1843 LEEADAFEKHKFN K NNENGE D GNKEADFNKEKDLKEDDE EEI E E 1886
PTZ00121
PTZ00121 MAEBL; Provisional
1631-2322
1.40e-05
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 51.30
E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1631 NM E KKRGHHD D S D E DA SP D KT A LSS T K E lsmpfsggqd S F S K FTMEMVRQYM K E EE V R A A HQSSLLRLREKALK E KT KAE 1710
Cdd:PTZ00121 1068 QD E GLKPSYK D F D F DA KE D NR A DEA T E E ---------- A F G K AEEAKKTETG K A EE A R K A EEAKKKAEDARKAE E AR KAE 1137
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1711 lawl EHQ K KHLRD K G ED D K MPPL - RK KQRGLLLRLQQEKAEI K RLQE A N KA ARKERQLI L KQQ E EIERIRQT ti KLQ E KL 1789
Cdd:PTZ00121 1138 ---- DAR K AEEAR K A ED A K RVEI a RK AEDARKAEEARKAEDA K KAEA A R KA EEVRKAEE L RKA E DARKAEAA -- RKA E EE 1211
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1790 KS A G E KK lgsladdd E AED N K A A SPGPPGL E TRSPSPISISSS E TSSIMQKL K SMRS RM DEKFLTKREQ K LMQR R Q h A E E 1869
Cdd:PTZ00121 1212 RK A E E AR -------- K AED A K K A EAVKKAE E AKKDAEEAKKAE E ERNNEEIR K FEEA RM AHFARRQAAI K AEEA R K - A D E 1282
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1870 L LEWKRRLD A E EA EIQQME K Q A LA A wdkelvkprt P KK EQ E SQRTEQKGIAS EE GSPMPSYSPRNS E scipedlgspsdl 1949
Cdd:PTZ00121 1283 L KKAEEKKK A D EA KKAEEK K K A DE A ---------- K KK AE E AKKADEAKKKA EE AKKKADAAKKKA E ------------- 1339
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1950 cvps EA RVQ A QPGSP E HSTLTE E MVFSQ E LESTSPS K HSPP K SCLSMS K QESSKASHRT E GH chlpv K SHQPCYSWS DE S 2029
Cdd:PTZ00121 1340 ---- EA KKA A EAAKA E AEAAAD E AEAAE E KAEAAEK K KEEA K KKADAA K KKAEEKKKAD E AK ----- K KAEEDKKKA DE L 1410
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2030 LSMTQSETTS D QSDIEGRIRALK DE LR K R --- KSVVEQL K R --- E QR K RQKERL KA Q EA SLLRQLETYD E FI KK TE g E LS 2103
Cdd:PTZ00121 1411 KKAAAAKKKA D EAKKKAEEKKKA DE AK K K aee AKKADEA K K kae E AK K AEEAKK KA E EA KKADEAKKKA E EA KK AD - E AK 1489
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2104 QDLDISPTSKFQM K T lssv SEKP K I K PHPLHRS E T AK TWKSVTES E RSRG sl A SI A EHVDSSLSCS E RAIS E RSLS A YA K 2183
Cdd:PTZ00121 1490 KKAEEAKKKADEA K K ---- AAEA K K K ADEAKKA E E AK KADEAKKA E EAKK -- A DE A KKAEEKKKAD E LKKA E ELKK A EE K 1563
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2184 RGV E LDSRI E HLQASSPDLSSRKAQT E SRDSL E SAPSLSPV K ELN A PD - RIYDVSEA KAE DTSQKS E IQEI -- ESM K L E S 2260
Cdd:PTZ00121 1564 KKA E EAKKA E EDKNMALRKAEEAKKA E EARIE E VMKLYEEE K KMK A EE a KKAEEAKI KAE ELKKAE E EKKK ve QLK K K E A 1643
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568909734 2261 S E VED A - CC K QSGGSEVLLKLDL A SETLSS K ELPSDSANVQQ D LD K P A TETSH E K EEA L K EDQ 2322
Cdd:PTZ00121 1644 E E KKK A e EL K KAEEENKIKAAEE A KKAEED K KKAEEAKKAEE D EK K A A EALKK E A EEA K K AEE 1706
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
1679-1923
1.06e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1679 R QYMK E E E VRA A HQSS L LRLR E KALK E KTKA E LAWL E HQKKHLRDKG E DDK mpp LRKKQRG LL LR L QQEKAE I K RL Q E AN 1758
Cdd:COG1196 235 R ELEA E L E ELE A ELEE L EAEL E ELEA E LAEL E AELE E LRLELEELEL E LEE --- AQAEEYE LL AE L ARLEQD I A RL E E RR 311
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1759 KAARKERQ ---- LILKQQ EE I E RIRQTTIK L Q E K L KS A G E KKLGSL A DDD EAE DNKAA spgppg L E TRSPSPISISSSET 1834
Cdd:COG1196 312 RELEERLE elee ELAELE EE L E ELEEELEE L E E E L EE A E E ELEEAE A ELA EAE EALLE ------ A E AELAEAEEELEELA 385
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1835 SSIMQK L KSMRS - RMDEKF L TKR E QK L MQ R R - QHA EEL L E WKRR L DAE E A E IQQM E KQALA A WDK E L vkprtpk KEQ E SQ 1912
Cdd:COG1196 386 EELLEA L RAAAE l AAQLEE L EEA E EA L LE R L e RLE EEL E E LEEA L AEL E E E EEEE E EALEE A AEE E A ------- ELE E EE 458
250
....*....|.
gi 568909734 1913 RTEQKGI A SEE 1923
Cdd:COG1196 459 EALLELL A ELL 469
PTZ00121
PTZ00121 MAEBL; Provisional
1365-1942
1.19e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 44.75
E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1365 KA QQQRHERDLALLKLK A EQE A LECQRQL EE TRNKTAQVH AE sl QQVVKSQR E VT E VLQ EA TC K IAAQQSET A RLTTDA A 1444
Cdd:PTZ00121 1310 KA EEAKKADEAKKKAEE A KKK A DAAKKKA EE AKKAAEAAK AE -- AEAAADEA E AA E EKA EA AE K KKEEAKKK A DAAKKK A 1387
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1445 RQICEMA E LTRTHLA D AITTSGVPL A TLYDHQRQ hfpdfmr KLRT KAE TDRISHS A SHSQSKEGAV D SKRQ K FSPSRDS y 1524
Cdd:PTZ00121 1388 EEKKKAD E AKKKAEE D KKKADELKK A AAAKKKAD ------- EAKK KAE EKKKADE A KKKAEEAKKA D EAKK K AEEAKKA - 1459
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1525 s E SSRY K SHDYRSSGSSRQDSPSVPPSK E NE K PFHGE K MES svd EQLQT AA DDSLRS D SIPSLPDE K DSTSI - AT E YSL K 1603
Cdd:PTZ00121 1460 - E EAKK K AEEAKKADEAKKKAEEAKKAD E AK K KAEEA K KKA --- DEAKK AA EAKKKA D EAKKAEEA K KADEA k KA E EAK K 1535
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1604 F DE SMTED E I ---- E E K SFRS L LPS E SHRR fn M E KKRGHHD D SDEDASPDKT A LSSTKELSMPFSGGQDSFS K FTM E MVR 1679
Cdd:PTZ00121 1536 A DE AKKAE E K kkad E L K KAEE L KKA E EKKK -- A E EAKKAEE D KNMALRKAEE A KKAEEARIEEVMKLYEEEK K MKA E EAK 1613
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1680 Q ---- YM K E EE VRA A HQ -- SSLLR L RE K ALK EK T KAE LAWLEHQKKHLRDKG E DD K MPPLR KK QRGLLLRLQQ EK AEIKR 1753
Cdd:PTZ00121 1614 K aeea KI K A EE LKK A EE ek KKVEQ L KK K EAE EK K KAE ELKKAEEENKIKAAE E AK K AEEDK KK AEEAKKAEED EK KAAEA 1693
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1754 L QEANKA A R K ERQ L IL K QQ EE IERIRQTTIKLQ E KLKS A G E K K LGSLA D DDE AE DN K AASPGPPGLETRSPSPISISSSE 1833
Cdd:PTZ00121 1694 L KKEAEE A K K AEE L KK K EA EE KKKAEELKKAEE E NKIK A E E A K KEAEE D KKK AE EA K KDEEEKKKIAHLKKEEEKKAEEI 1773
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1834 TSSIMQKLKSMRSRM DEK FLTKREQ K LMQRRQHAEELL E WKRRLDAEEAEIQQ ME KQ A L aawd KE LVKP ---- RTPKKEQ 1909
Cdd:PTZ00121 1774 RKEKEAVIEEELDEE DEK RRMEVDK K IKDIFDNFANII E GGKEGNLVINDSKE ME DS A I ---- KE VADS knmq LEEADAF 1849
570 580 590
....*....|....*....|....*....|...
gi 568909734 1910 E SQRTEQKGIAS E E G S pmp SYSPR N S E SCIP ED 1942
Cdd:PTZ00121 1850 E KHKFNKNNENG E D G N --- KEADF N K E KDLK ED 1879
PTZ00108
PTZ00108 DNA topoisomerase 2-like protein; Provisional
1762-2107
2.02e-03
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain]
Cd Length: 1388
Bit Score: 43.88
E-value: 2.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1762 RKE RQ L ILKQQ E E --------- I ERIRQTTIKLQEKL K SAGE K --- KLG SLADD D E ---- A E DNK A ASPGPPGLETRSPS 1825
Cdd:PTZ00108 996 RKE YL L GKLER E L arlsnkvrf I KHVINGELVITNAK K KDLV K elk KLG YVRFK D I ikkk S E KIT A EEEEGAEEDDEADD 1075
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1826 PISISSSETSSIMQK L K SM R -- S RMD EK FL t K REQK L MQRRQHA E E L LE ------ W KRR LD AE E AEIQQM E KQALAAWD K 1897
Cdd:PTZ00108 1076 EDDEEELGAAVSYDY L L SM P iw S LTK EK VE - K LNAE L EKKEKEL E K L KN ttpkdm W LED LD KF E EALEEQ E EVEEKEIA K 1154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1898 E L - V K PR T PK K EQESQRTEQ K GIASEEGS -------- PMPSYSPRNSE S CIPED L GSPS D LCVPSEARVQAQPGSPEHST 1968
Cdd:PTZ00108 1155 E Q r L K SK T KG K ASKLRKPKL K KKEKKKKK ssadkskk ASVVGNSKRVD S DEKRK L DDKP D NKKSNSSGSDQEDDEEQKTK 1234
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1969 LTEEM V FSQELESTSP SK H S PPKSCL S MSKQESSKASHRTEGHCHLPVK S HQ P CYSWS D ESLSMTQSETTS ---- DQSDI 2044
Cdd:PTZ00108 1235 PKKSS V KRLKSKKNNS SK S S EDNDEF S SDDLSKEGKPKNAPKRVSAVQY S PP P PSKRP D GESNGGSKPSSP tkkk VKKRL 1314
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568909734 2045 EG RIR ALK DELRKR K SVVEQL K REQ R ----- KR Q KE RL KAQEASLLRQLETY D EFIKKTEGELSQ D LD 2107
Cdd:PTZ00108 1315 EG SLA ALK KKKKSE K KTARKK K SKT R vkqas AS Q SS RL LRRPRKKKSDSSSE D DDDSEVDDSEDE D DE 1382
PRK12704
PRK12704 phosphodiesterase; Provisional
1676-1778
2.56e-03
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain]
Cd Length: 520
Bit Score: 43.23
E-value: 2.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1676 E MVRQYMK E EEVR A AH -- QSS LL RLR E KAL K EKTKA E ------ LAW L EHQK K H L RD K G E -- D D K MPP L R K KQR glll R L Q 1745
Cdd:PRK12704 38 E EAKRILE E AKKE A EA ik KEA LL EAK E EIH K LRNEF E kelrer RNE L QKLE K R L LQ K E E nl D R K LEL L E K REE ---- E L E 113
90 100 110
....*....|....*....|....*....|....
gi 568909734 1746 QEKA E IKRL Q EANKAARK E - RQ LI LK Q QE E I ERI 1778
Cdd:PRK12704 114 KKEK E LEQK Q QELEKKEE E l EE LI EE Q LQ E L ERI 147
COG5022
COG5022 Myosin heavy chain [General function prediction only];
2051-2331
3.00e-03
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain]
Cd Length: 1463
Bit Score: 43.53
E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2051 LK DE L RKRKSVVEQLKREQRKRQKER L KAQ E AS L LRQL E T Y DEFI KK TEGELSQDLDISPTS K FQM K T L SSV S EKPKI kp 2130
Cdd:COG5022 933 LK KL L NNIDLEEGPSIEYVKLPELNK L HEV E SK L KETS E E Y EDLL KK STILVREGNKANSEL K NFK K E L AEL S KQYGA -- 1010
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2131 hp L HR S E taktw K SVT E SERSRGS L A S iaehv D S SLSC SE RA i SERS L SAYA K RGVE L DSRIEH LQA SSPD L SS R KAQTE 2210
Cdd:COG5022 1011 -- L QE S T ----- K QLK E LPVEVAE L Q S ----- A S KIIS SE ST - ELSI L KPLQ K LKGL L LLENNQ LQA RYKA L KL R RENSL 1077
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2211 SR D S ---- LES APS L S --- P VK E L NAPD R IY d V SE A KAEDT --- SQKSEIQEI E SM K LE S SE V EDACCKQSGG S EVL L K L 2280
Cdd:COG5022 1078 LD D K qlyq LES TEN L L kti N VK D L EVTN R NL - V KP A NVLQF iva QMIKLNLLQ E IS K FL S QL V NTLEPVFQKL S VLQ L E L 1156
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 2281 D LASETLSSKE LPS D --- S A NVQQD ------ L D KPATET S H E KEE a LK EDQSNHSTDDR S 2331
Cdd:COG5022 1157 D GLFWEANLEA LPS P ppf A A LSEKR lyqsal Y D EKSKLS S S E VND - LK NELIALFSKIF S 1215
SCP-1
pfam05483 Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ...
1359-1792
8.37e-03
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain]
Cd Length: 787
Bit Score: 42.02
E-value: 8.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1359 SL AQIIKAQ QQR H E RD --- L ALLKLKAEQEAL E CQRQLEETR NK ta Q V HA E S L QQVVKSQREV --- TEVLQEATCKIAAQ 1432
Cdd:pfam05483 360 SL EELLRTE QQR L E KN edq L KIITMELQKKSS E LEEMTKFKN NK -- E V EL E E L KKILAEDEKL lde KKQFEKIAEELKGK 437
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1433 QS E TAR L TTDAARQ I CEM a E LTR T hlad AI T TS gvplatlydhq RQ H FPDFMRK L R T KA E TDRISHSASHSQSKEGAVDS 1512
Cdd:pfam05483 438 EQ E LIF L LQAREKE I HDL - E IQL T ---- AI K TS ----------- EE H YLKEVED L K T EL E KEKLKNIELTAHCDKLLLEN 501
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1513 K RQ kfsp SRDSYSESSRY K S H DYRSSGSSR Q DS --- PSVPPSK E N E KPFHG E k M ES SVD E QL Q TAADDSLRS D SIPSLPD 1589
Cdd:pfam05483 502 K EL ---- TQEASDMTLEL K K H QEDIINCKK Q EE rml KQIENLE E K E MNLRD E - L ES VRE E FI Q KGDEVKCKL D KSEENAR 576
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1590 EKDSTSIAT E YSL K FD E SMTEDEIEEKSFRSLLPS E S H RRFNME KK R G HHDDSDED A SPD K T alsst KE L SMPFSGGQDS 1669
Cdd:pfam05483 577 SIEYEVLKK E KQM K IL E NKCNNLKKQIENKNKNIE E L H QENKAL KK K G SAENKQLN A YEI K V ----- NK L ELELASAKQK 651
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1670 F S kftm E MVRQ Y M KE E E VRAAHQSS LL RLR EKA --- LK E KT K ------------- AE LAW L EHQK KH lrdkg ED DK MPPL 1733
Cdd:pfam05483 652 F E ---- E IIDN Y Q KE I E DKKISEEK LL EEV EKA kai AD E AV K lqkeidkrcqhki AE MVA L MEKH KH ----- QY DK IIEE 722
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568909734 1734 R KKQR GL LLRLQ QE KAEI K RLQ E ANKAAR K ERQ L I LK Q Q E EIE RIRQTTI K LQE K LKS A 1792
Cdd:pfam05483 723 R DSEL GL YKNKE QE QSSA K AAL E IELSNI K AEL L S LK K Q L EIE KEEKEKL K MEA K ENT A 781
DUF5401
pfam17380 Family of unknown function (DUF5401); This is a family of unknown function found in ...
1603-1941
9.91e-03
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain]
Cd Length: 722
Bit Score: 41.65
E-value: 9.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1603 K FDESMTED E I EEK SF ----- R S L LPS E SH R RFN M EKKRGHH ddsded A SPDKT A LSSTK EL SMP fsgg QDSFS K FTM E M 1677
Cdd:pfam17380 295 K MEQERLRQ E K EEK AR everr R K L EEA E KA R QAE M DRQAAIY ------ A EQERM A MERER EL ERI ---- RQEER K REL E R 364
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1678 V RQ YMKEE E VRAAHQSSL L RLREKALK E KTKA EL AWLEHQ K khlrdkgeddkmpp LRKKQ R GLLLRL Q QEKA E IK R LQEA 1757
Cdd:pfam17380 365 I RQ EEIAM E ISRMRELER L QMERQQKN E RVRQ EL EAARKV K -------------- ILEEE R QRKIQQ Q KVEM E QI R AEQE 430
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1758 NKAA R KE R Q L ILKQQE E I ER I R QTTIKL Q EKL ---- KSAG E K K LGS L ADDD E AE D N K A A spgppgl E TRSPSPISISSS E 1833
Cdd:pfam17380 431 EARQ R EV R R L EEERAR E M ER V R LEEQER Q QQV erlr QQEE E R K RKK L ELEK E KR D R K R A ------- E EQRRKILEKELE E 503
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568909734 1834 TSSI M QKLKSM R s RMD EK FLTK R EQKLM -- Q RR QH AEE ll E WKRRLDA EE - AE IQ QM ------ E KQA L A A WDK E LVKP R T 1904
Cdd:pfam17380 504 RKQA M IEEERK R - KLL EK EMEE R QKAIY ee E RR RE AEE -- E RRKQQEM EE r RR IQ EQ mrkate E RSR L E A MER E REMM R Q 580
330 340 350
....*....|....*....|....*....|....*..
gi 568909734 1905 p KK E Q E SQ R T E QK g IASEEGSPM P S Y S PR N SE SCI P E 1941
Cdd:pfam17380 581 - IV E S E KA R A E YE - ATTPITTIK P I Y R PR I SE YQP P D 615
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
