|
Name |
Accession |
Description |
Interval |
E-value |
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
118-244 |
1.23e-34 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 131.70 E-value: 1.23e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 118 ERDTEHSQDLDSALLRLEEEQQRSASLAQVNAMLREQLDQANLANQALSEDIRKVTSDWTRSCKELEQREAVWRREEESF 197
Cdd:pfam15035 64 RLEREHSADLEEALIRLEEERQRSESLSQVNSLLREQLEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAF 143
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568931104 198 NTYFSSEHSRLLRLWRQVMGLRRQASEVKMGTERDLLQLGGELVRTS 244
Cdd:pfam15035 144 NEYLSSEHSRLLSLWREVVAVRRQFTELKTATERDLSELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
441-981 |
7.47e-28 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 123.12 E-value: 7.47e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 441 KRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLT 520
Cdd:COG1196 222 LKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 521 HSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREAL 600
Cdd:COG1196 302 QDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEEL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 601 SCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVAL 680
Cdd:COG1196 382 EELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 681 LGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQE 760
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 761 LEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQ 840
Cdd:COG1196 542 AALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 841 LEADS--QALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWR 918
Cdd:COG1196 622 LLGRTlvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568931104 919 ELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESE 981
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
503-1222 |
7.50e-27 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 120.16 E-value: 7.50e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 503 QRLRSANELLSREKGNLthslqvtqqqaKELRQELEKLQA---AQEELKRQHNQLEDAQED-SVQEGARARRELERSHRQ 578
Cdd:TIGR02168 179 RKLERTRENLDRLEDIL-----------NELERQLKSLERqaeKAERYKELKAELRELELAlLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 579 LEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNES 658
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 659 LAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRS 738
Cdd:TIGR02168 328 LESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 739 ERSHLQEQLAQLSRQLSGRDQEL-EQALRESQRQVE----ALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRL 813
Cdd:TIGR02168 408 RLERLEDRRERLQQEIEELLKKLeEAELKELQAELEeleeELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 814 RLEKEALES---SLFDVQRQLAQLEARREQLEADSQALL----------LAKETLTGElaGLRQQVTSTEEKAALDKELM 880
Cdd:TIGR02168 488 QARLDSLERlqeNLEGFSEGVKALLKNQSGLSGILGVLSelisvdegyeAAIEAALGG--RLQAVVVENLNAAKKAIAFL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 881 TQKL----------VQAEREAQASLREQRAAHEEDL---------------------------------QRLQHEKEAAW 917
Cdd:TIGR02168 566 KQNElgrvtflpldSIKGTEIQGNDREILKNIEGFLgvakdlvkfdpklrkalsyllggvlvvddldnaLELAKKLRPGY 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 918 R--------------ELQAERAQLQGQLQQEREelLARMEAEKEELSKEIAALQQERDEgLLLAESEKQQALSLKESEKT 983
Cdd:TIGR02168 646 RivtldgdlvrpggvITGGSAKTNSSILERRRE--IEELEEKIEELEEKIAELEKALAE-LRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 984 ALSEKLMGTRHSLAAISLEmERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREAC 1063
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAE-VEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAL 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1064 MREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESE 1143
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNE 881
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1144 RislklanedkeqklALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLA 1222
Cdd:TIGR02168 882 R--------------ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLS 946
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
438-962 |
1.23e-26 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 119.27 E-value: 1.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 438 ALHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKG 517
Cdd:COG1196 261 ELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 518 NLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVR 597
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 598 EALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLskmsalnESLAQDKLELNRLIAQLEEEK 677
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA-------ALLEAALAELLEELAEAAARL 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 678 VALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGR 757
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGR 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 758 DQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEAR 837
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEG 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 838 REQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAW 917
Cdd:COG1196 654 EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 568931104 918 RELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDE 962
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
444-1203 |
1.50e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 115.92 E-value: 1.50e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 444 LQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSL 523
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 524 QVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCA 603
Cdd:TIGR02168 312 ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 604 ILQRDVLQTEkaevaeaLTKAEAGRAQLELSLTKLRAEEASLRDSLS--KMSALNESLAQDKLELNRLIAQLEEEKVALL 681
Cdd:TIGR02168 392 ELQIASLNNE-------IERLEARLERLEDRRERLQQEIEELLKKLEeaELKELQAELEELEEELEELQEELERLEEALE 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 682 GRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQilvlrSERSHLQEQLAQLSRQLSGRDQEL 761
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQ-----SGLSGILGVLSELISVDEGYEAAI 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 762 EQALRESQRQ--VEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARRE 839
Cdd:TIGR02168 540 EAALGGRLQAvvVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 840 QLEADS-------QALLLAKE--------TLTGELAGLRQQVTSTEEKAALdkelmtqkLVQAEREAQASLREQRAAHEE 904
Cdd:TIGR02168 620 YLLGGVlvvddldNALELAKKlrpgyrivTLDGDLVRPGGVITGGSAKTNS--------SILERRREIEELEEKIEELEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 905 DLqrlqHEKEAAWRELQAERAQLQGQLQQEREElLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKEsEKTA 984
Cdd:TIGR02168 692 KI----AELEKALAELRKELEELEEELEQLRKE-LEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA-EIEE 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 985 LSEKLMGTRHSLAAISLEMERQKRDAQSRQEQdrntLNALTSELRDLRAQLEEataaHAQTVKELEERTGNLGRQREACM 1064
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIEQLKEE----LKALREALDELRAELTL----LNEEAANLRERLESLERRIAATE 837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1065 REAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESER 1144
Cdd:TIGR02168 838 RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1145 ISLKLANEDKEQKLA--------LLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTL 1203
Cdd:TIGR02168 918 EELREKLAQLELRLEglevridnLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
534-1144 |
1.90e-25 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 115.42 E-value: 1.90e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 534 RQELEKLQAAQEELKRQHNQLEDAQEDsvqegARARREL--ERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQ 611
Cdd:COG1196 185 EENLERLEDILGELERQLEPLERQAEK-----AERYRELkeELKELEAELLLLKLRELEAELEELEAELEELEAELEELE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 612 TEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEhat 691
Cdd:COG1196 260 AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELE--- 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 692 tmavEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQ 771
Cdd:COG1196 337 ----EELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 772 VEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLA 851
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 852 KETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQAslREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQL 931
Cdd:COG1196 493 LLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA--AYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAK 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 932 QQEREELlaRMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQ 1011
Cdd:COG1196 571 AGRATFL--PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRE 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1012 SRQEQDRntLNALTSELRDLRAQLEEATAAHAQTVKELEERtgnLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEA 1091
Cdd:COG1196 649 VTLEGEG--GSAGGSLTGGSRRELLAALLEAEAELEELAER---LAEEELELEEALLAEEEEERELAEAEEERLEEELEE 723
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1092 QRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESER 1144
Cdd:COG1196 724 EALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
477-1051 |
1.01e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 109.64 E-value: 1.01e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 477 LEEQLQRLRDQ--TAASAQAQEDAQREAQ---------RLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQE 545
Cdd:COG1196 198 LERQLEPLERQaeKAERYRELKEELKELEaellllklrELEAELEELEAELEELEAELEELEAELAELEAELEELRLELE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 546 ELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAE 625
Cdd:COG1196 278 ELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 626 AGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLR 705
Cdd:COG1196 358 AELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEE 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 706 LEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLsGRDQELEQALRESQRQVEALERAAREKEam 785
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL-AEAAARLLLLLEAEADYEGFLEGVKAAL-- 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 786 AKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQ 865
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALAR 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 866 VTSTEEKAALDKELmtQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAE 945
Cdd:COG1196 595 GAIGAAVDLVASDL--READARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 946 KEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALT 1025
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
570 580
....*....|....*....|....*.
gi 568931104 1026 SELRDLRAQLEEATAAHAQTVKELEE 1051
Cdd:COG1196 753 LEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
701-1237 |
2.04e-23 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 108.49 E-value: 2.04e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 701 LEQLRLEQEVERQGLQGSLCVAEQARE---ALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALER 777
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAelaELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 778 AAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTG 857
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 858 ELAGLRQQVTSTEEKAALDKELMTQKL-----VQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQ 932
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEeeleeLEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 933 QEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQS 1012
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVV 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1013 RQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQ 1092
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLE 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1093 RKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISL-KLANEDKEQKLALLEEARVSVAKE 1171
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLaEEELELEEALLAEEEEERELAEAE 713
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1172 AGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEK-ESRREALG 1237
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERlEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
903-1760 |
4.11e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 107.83 E-value: 4.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQHEKEAA--WRELQAERAQLQGQLQQEReelLARMEAEKEELSKEIAALQQERDEgLLLAESEKQQALSLKES 980
Cdd:TIGR02168 199 ERQLKSLERQAEKAerYKELKAELRELELALLVLR---LEELREELEELQEELKEAEEELEE-LTAELQELEEKLEELRL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 981 EKTALSEK---LMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLG 1057
Cdd:TIGR02168 275 EVSELEEEieeLQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1058 RQREacmrEAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAV 1137
Cdd:TIGR02168 355 SLEA----ELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1138 KKAESERISLKLANEDKEQKLALLEEARVsvakeagelRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADL 1217
Cdd:TIGR02168 431 EEAELKELQAELEELEEELEELQEELERL---------EEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1218 QGrLALGERTEKESRREALGLRQRLLKGESSLEALKQELqgsqrklqeqEAEFRARERGLLG-SLEEARGA----EKRLL 1292
Cdd:TIGR02168 502 EG-FSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAI----------EAALGGRLQAVVVeNLNAAKKAiaflKQNEL 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1293 DSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLGLGRVSSSPAREAPAGG 1372
Cdd:TIGR02168 571 GRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTL 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1373 SGDGLSSPspleysprsqppspGLIA-SPAPPDLDPEAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERdh 1451
Cdd:TIGR02168 651 DGDLVRPG--------------GVITgGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEL-- 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1452 aasrakqlqkavaeseeawRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKA 1531
Cdd:TIGR02168 715 -------------------EQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEE 775
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1532 TEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVE 1611
Cdd:TIGR02168 776 ELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIE 855
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1612 RLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSStqdknlhLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLG 1691
Cdd:TIGR02168 856 SLAAEIEELEELIEELESELEALLNERASLEEALAL-------LRSELEELSEELRELESKRSELRRELEELREKLAQLE 928
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1692 EQVQTLRGELASLeLQRGDAEGQLQqlqqalrqrqegEAMALRSVQKLQEERRLLQERLGSLQRALAQL 1760
Cdd:TIGR02168 929 LRLEGLEVRIDNL-QERLSEEYSLT------------LEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1004-1597 |
3.96e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 104.25 E-value: 3.96e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1004 ERQKRDAQSRQEqdrntlnaLTSELRDLRAQLeeataaHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDG 1083
Cdd:COG1196 206 ERQAEKAERYRE--------LKEELKELEAEL------LLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEE 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1084 LRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEE 1163
Cdd:COG1196 272 LRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1164 ARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLL 1243
Cdd:COG1196 352 ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1244 KGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRL------LDSARSLELRLEAVRAETSELGLRLS 1317
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALaelleeLAEAAARLLLLLEAEADYEGFLEGVK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1318 AAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLGLGRVSSSPAREAPAGGSGDGLSSPSPLeysprsqpPSPGLI 1397
Cdd:COG1196 512 AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFL--------PLDKIR 583
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1398 ASPAPPDLDPEAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRL 1477
Cdd:COG1196 584 ARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLT 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1478 SGAQAELALQEESVRRSKREcratldQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKL 1557
Cdd:COG1196 664 GGSRRELLAALLEAEAELEE------LAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREEL 737
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 568931104 1558 ELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVA 1597
Cdd:COG1196 738 LEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
808-1353 |
3.60e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.17 E-value: 3.60e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 808 EEAIRLRLEKEALESSLFdvQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLvQA 887
Cdd:COG1196 213 ERYRELKEELKELEAELL--LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQ-AE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 888 EREAQASLREQRAAHEEDLQRLQHEKEAAwRELQAERAQLQGQLQQEREElLARMEAEKEELSKEIAALQQERDEGLLLA 967
Cdd:COG1196 290 EYELLAELARLEQDIARLEERRRELEERL-EELEEELAELEEELEELEEE-LEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 968 ESEKQQALSLKESEKTALSEKLMGTRHSLAAIS-----LEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAH 1042
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAqleelEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1043 AQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGL--RRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGA 1120
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAaaRLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1121 ------KEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQ 1194
Cdd:COG1196 528 vligveAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1195 ELRRQMKTLDSDNGRLGRELADLQGRLALGE-RTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRAR 1273
Cdd:COG1196 608 LREADARYYVLGDTLLGRTLVAARLEAALRRaVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1274 ERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRR 1353
Cdd:COG1196 688 LAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELER 767
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
664-1351 |
9.66e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.13 E-value: 9.66e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 664 LELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLE-QEVER--QGLQGSLCVAEQAREALEQQILVLRSER 740
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEvSELEEeiEELQKELYALANEISRLEQQKQILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 741 SHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRlekeal 820
Cdd:TIGR02168 312 ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR------ 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 821 eSSLFDVQRQLAQLEARREQLEADsqalllaKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRA 900
Cdd:TIGR02168 386 -SKVAQLELQIASLNNEIERLEAR-------LERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 901 AHEEDLQRLQHEKEAAWRELQAERAQLQgQLQQeREELLARMEAEKEELSKEIAALQQERdEGLLLAESEKQQALSLKES 980
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELA-QLQA-RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGILGVLSELISVDEG 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 981 EKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSelrdlraqleeataahaQTVKELEERTGNLGRQR 1060
Cdd:TIGR02168 535 YEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDS-----------------IKGTEIQGNDREILKNI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1061 EACMREAEELRTQLRVLEDTRDGLRRELLEAQRKgrdsqdsseahrQEASELRRSLSEGA----KEREALRRsneelRSA 1136
Cdd:TIGR02168 598 EGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDL------------DNALELAKKLRPGYrivtLDGDLVRP-----GGV 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1137 VKKAESERISLKLAnedKEQKLALLEEARVSVAKEAGELRASLQEVERSRLE-------ARRELQELRRQMKTLDSDNGR 1209
Cdd:TIGR02168 661 ITGGSAKTNSSILE---RRREIEELEEKIEELEEKIAELEKALAELRKELEEleeeleqLRKELEELSRQISALRKDLAR 737
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1210 LGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERgllgSLEEARGAEK 1289
Cdd:TIGR02168 738 LEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE----ALDELRAELT 813
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1290 RLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSAL 1351
Cdd:TIGR02168 814 LLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL 875
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1027-1863 |
1.46e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.36 E-value: 1.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1027 ELRDLRAQLEEATAA-HAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAH 1105
Cdd:TIGR02168 214 RYKELKAELRELELAlLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1106 RQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERS 1185
Cdd:TIGR02168 294 ANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESR 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1186 RLEARRELQELRR-------QMKTLDSDNGRLGRELADLQGRLA-LGERTEKESRREALGLRQRLLKGESSLEALKQELQ 1257
Cdd:TIGR02168 374 LEELEEQLETLRSkvaqlelQIASLNNEIERLEARLERLEDRRErLQQEIEELLKKLEEAELKELQAELEELEEELEELQ 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1258 GSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEV--ELARVEA 1335
Cdd:TIGR02168 454 EELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVlsELISVDE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1336 QRRVA-EAQLGGLRSALRRglglgrVSSSPAREAPAGGSGDGLSSPSPLEYSprsqppspglIASPAPPDLDPEAVRDAL 1414
Cdd:TIGR02168 534 GYEAAiEAALGGRLQAVVV------ENLNAAKKAIAFLKQNELGRVTFLPLD----------SIKGTEIQGNDREILKNI 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1415 RDFLQELRSAQRERDELKVQTSTLSQQLVeMEAERDHAASRAKQLQKavaesEEAWRSADRRLSGAQAELALQEESVrrs 1494
Cdd:TIGR02168 598 EGFLGVAKDLVKFDPKLRKALSYLLGGVL-VVDDLDNALELAKKLRP-----GYRIVTLDGDLVRPGGVITGGSAKT--- 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1495 krecratldqmavlERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLG 1574
Cdd:TIGR02168 669 --------------NSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1575 LGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLH 1654
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1655 LQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRgdaegqlqqlqqalrqrqegeamalr 1734
Cdd:TIGR02168 815 LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI-------------------------- 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1735 svQKLQEERRLLQERLGSLQRALAQLEAEKRDLERsalqfdkdrvalrkTLDKVEREKLRSHEDTLRLNAERGRLDRTLT 1814
Cdd:TIGR02168 869 --EELESELEALLNERASLEEALALLRSELEELSE--------------ELRELESKRSELRRELEELREKLAQLELRLE 932
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1815 GAELDLAEAQQQI---QHLEAQVDVALEGNHNPVQPEAGEQQLELQQEVERL 1863
Cdd:TIGR02168 933 GLEVRIDNLQERLseeYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
435-1192 |
2.43e-19 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 95.98 E-value: 2.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 435 IHSALHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEG--ERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELl 512
Cdd:PTZ00121 1055 NHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEAteEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEA- 1133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 513 srekgnlthslqvtqQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEqleVKRSGLTKE 592
Cdd:PTZ00121 1134 ---------------RKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEE---VRKAEELRK 1195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 593 LVEVREAlSCAILQRDVLQTEKAEVAEALTKAEAGRaqlelsltklRAEEASLRDSlskmsalnESLAQDKLELNRLIAQ 672
Cdd:PTZ00121 1196 AEDARKA-EAARKAEEERKAEEARKAEDAKKAEAVK----------KAEEAKKDAE--------EAKKAEEERNNEEIRK 1256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 673 LEEEKVALLGRQQQAEHAttmavEKQELLEQLRLEQEVERqglqgslcvAEQAREALEQQilvlRSERSHLQEQLAQLSR 752
Cdd:PTZ00121 1257 FEEARMAHFARRQAAIKA-----EEARKADELKKAEEKKK---------ADEAKKAEEKK----KADEAKKKAEEAKKAD 1318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 753 QLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGlavKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQR-QL 831
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD---EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKaDE 1395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 832 AQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEE--KAALDKELMTQKLVQAEREAQASLREQRAaheEDLQRL 909
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEakKKAEEAKKADEAKKKAEEAKKAEEAKKKA---EEAKKA 1472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 910 QHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAEsEKQQALSLKESEKTALSEKL 989
Cdd:PTZ00121 1473 DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAE-EAKKADEAKKAEEKKKADEL 1551
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 990 MGTRHSLAAisleMERQKRDAQSRQEQDRNTLNALTSELRDL---------------------RAQLEEATAAHAQTVKE 1048
Cdd:PTZ00121 1552 KKAEELKKA----EEKKKAEEAKKAEEDKNMALRKAEEAKKAeearieevmklyeeekkmkaeEAKKAEEAKIKAEELKK 1627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1049 LEE---RTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREA 1125
Cdd:PTZ00121 1628 AEEekkKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1126 LRRSNEELRSA--VKKAESER-ISLKLANEDKEQKLALLEEARVSvAKEAGELRASLQEVERSRLEARRE 1192
Cdd:PTZ00121 1708 KKKEAEEKKKAeeLKKAEEENkIKAEEAKKEAEEDKKKAEEAKKD-EEEKKKIAHLKKEEEKKAEEIRKE 1776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
743-1597 |
9.48e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 9.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 743 LQEQLAQLSRQLSGRDqeLEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALES 822
Cdd:TIGR02168 218 LKAELRELELALLVLR--LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALAN 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 823 SLFDVQRQLAQLEARREQLEADSQALLLAKETLtgelagLRQQVTSTEEKAALDKELmtqKLVQAEREAQASLREQRAAH 902
Cdd:TIGR02168 296 EISRLEQQKQILRERLANLERQLEELEAQLEEL------ESKLDELAEELAELEEKL---EELKEELESLEAELEELEAE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELlARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEK 982
Cdd:TIGR02168 367 LEELESRLEELEEQLETLRSKVAQLELQIASLNNEI-ERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEEL 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 983 TALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSE---LRDLRAQLEEATAAHAQTVKELEERTGNLGR- 1058
Cdd:TIGR02168 446 EEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARldsLERLQENLEGFSEGVKALLKNQSGLSGILGVl 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1059 --------QREACMREAEELRTQLRV-------------LEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLS 1117
Cdd:TIGR02168 526 selisvdeGYEAAIEAALGGRLQAVVvenlnaakkaiafLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1118 EGAKEREALRRSNEELRSAVKKAESERISLKLANEdkeqklallEEARVSVAKEAGELRASLQEVERSRLEARRELQELR 1197
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKK---------LRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERR 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1198 RqmktldsdngrlgrELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEfrarergl 1277
Cdd:TIGR02168 677 R--------------EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD-------- 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1278 lgsLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRrglgl 1357
Cdd:TIGR02168 735 ---LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALD----- 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1358 grvssspareapaggsgdglsspspleysprsqppspgliaspappdldpeAVRDALRDFLQELRSAQRERDELKVQTST 1437
Cdd:TIGR02168 807 ---------------------------------------------------ELRAELTLLNEEAANLRERLESLERRIAA 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1438 LSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATES 1517
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRR 915
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1518 ELRASQEKVSKMKATEAKLESDKRRLKEVLdasesrsikLELQRRALEGELQRSRlglgDREAHAQALQDRVDSLQRQVA 1597
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQERL---------SEEYSLTLEEAEALEN----KIEDDEEEARRRLKRLENKIK 982
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
81-841 |
2.00e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.43 E-value: 2.00e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 81 LQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVNERDTEHSQDLDSALLRLEEEQQRSASLAQVNAMLREQLDQANL 160
Cdd:TIGR02168 286 LQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEA 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 161 ANQALSEDIRKVTSDWTRSCKELEQREavwrREEESFNTYFSSEHSRLLRLWRQVMGLRRQASEVKMGTERDLLQlggel 240
Cdd:TIGR02168 366 ELEELESRLEELEEQLETLRSKVAQLE----LQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELK----- 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 241 vrtsrAVQELGLGLSASLHRAESKAEAALEKQKLLQAQLEEQLQAKLLREKDLAQLQVQSDLDKaDLSARVTELALSVEH 320
Cdd:TIGR02168 437 -----ELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLE-RLQENLEGFSEGVKA 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 321 LQNQNSEKDQVNRTLSDKLEALESLRLQEQTTLdtedGEGLQQTLRDLAQAALSDTESGVQLSSSERTAdtsdGSLRGFS 400
Cdd:TIGR02168 511 LLKNQSGLSGILGVLSELISVDEGYEAAIEAAL----GGRLQAVVVENLNAAKKAIAFLKQNELGRVTF----LPLDSIK 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 401 GQRTPTPPRHSPGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGleeq 480
Cdd:TIGR02168 583 GTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPGYRIVTLDGDLVRPG---- 658
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 481 lqrlrdqtaaSAQAQEDAQREAQRLRSANELLsrekgNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQED 560
Cdd:TIGR02168 659 ----------GVITGGSAKTNSSILERRREIE-----ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 561 SVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRA 640
Cdd:TIGR02168 724 LSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALRE 803
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 641 EEASLRDSLskmSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATtmavEKQELLEQLRLEQEVERQGLQGSLC 720
Cdd:TIGR02168 804 ALDELRAEL---TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS----EDIESLAAEIEELEELIEELESELE 876
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 721 VAEQAREALEQQILVLRSERSHLQEQLaqlsRQLSGRDQELEQALRESQrqvEALERAAREKEAMAKERAGLAVKLAAae 800
Cdd:TIGR02168 877 ALLNERASLEEALALLRSELEELSEEL----RELESKRSELRRELEELR---EKLAQLELRLEGLEVRIDNLQERLSE-- 947
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 568931104 801 rEGRTLSEEAIRLRLEKEALESSLfdvQRQLAQLEARREQL 841
Cdd:TIGR02168 948 -EYSLTLEEAEALENKIEDDEEEA---RRRLKRLENKIKEL 984
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
936-1790 |
2.88e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 92.05 E-value: 2.88e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 936 EELLARMEAEKEELSKEIAALQQERDEglllaeSEKQQALS--LKESEKTALSEKLMGTRHSLAAISLEM---ERQKRDA 1010
Cdd:TIGR02169 183 EENIERLDLIIDEKRQQLERLRREREK------AERYQALLkeKREYEGYELLKEKEALERQKEAIERQLaslEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1011 QSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVK----ELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRR 1086
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKekigELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1087 EL------LEAQRKGRDS-QDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLA 1159
Cdd:TIGR02169 337 EIeelereIEEERKRRDKlTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1160 LLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREAlglr 1239
Cdd:TIGR02169 417 RLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQREL---- 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1240 qrllkgeSSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRL--------------------LDSARSLE 1299
Cdd:TIGR02169 493 -------AEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYataievaagnrlnnvvveddAVAKEAIE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1300 ------------LRLEAVRAETSELGLrlsAAEGRAQGLEVELARVEAQRRVAEAQLGG-------LRSALRRGLGLGRV 1360
Cdd:TIGR02169 566 llkrrkagratfLPLNKMRDERRDLSI---LSEDGVIGFAVDLVEFDPKYEPAFKYVFGdtlvvedIEAARRLMGKYRMV 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1361 SSSPAREAPAGGSGDGLSSPSPLEYSPRSQPPSPGLIASpappdlDPEAVRDALRDFLQELRSAQRERDELKVQTSTLSQ 1440
Cdd:TIGR02169 643 TLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRE------RLEGLKRELSSLQSELRRIENRLDELSQELSDASR 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1441 QLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLqateselr 1520
Cdd:TIGR02169 717 KIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARL-------- 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1521 aSQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQrsrlglgDREAHAQALQDRVDSLQRQVADSE 1600
Cdd:TIGR02169 789 -SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQ-------ELQEQRIDLKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1601 VKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLtdaltqssaslsstqdknlhlqkalstcEHDRQVLQERLDAARQAL 1680
Cdd:TIGR02169 861 GKKEELEEELEELEAALRDLESRLGDLKKERDEL----------------------------EAQLRELERKIEELEAQI 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1681 SEARRQSSSLGEQVQTLRGELASLELQRGD-----AEGQLQQLQQALRQRQEGEAMALRSVQKLQ-EERRLLQERLGSLQ 1754
Cdd:TIGR02169 913 EKKRKRLSELKAKLEALEEELSEIEDPKGEdeeipEEELSLEDVQAELQRVEEEIRALEPVNMLAiQEYEEVLKRLDELK 992
|
890 900 910
....*....|....*....|....*....|....*..
gi 568931104 1755 RALAQLEAEKRDLERSALQFD-KDRVALRKTLDKVER 1790
Cdd:TIGR02169 993 EKRAKLEEERKAILERIEEYEkKKREVFMEAFEAINE 1029
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
254-843 |
4.10e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 91.15 E-value: 4.10e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 254 LSASLHRAESKAEAALEKQKLLQAQLEEQLQAKLLREKDLAQLQvqsdLDKADLSARVTELALSVEHLQNQNSEKDQVNR 333
Cdd:COG1196 244 LEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQ----AEEYELLAELARLEQDIARLEERRRELEERLE 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 334 TLSDKLEALESLRLQEQTTLDTEDGEgLQQTLRDLAQAALSDTESGVQLSSSERTAdtsdgslrgfsgqrtptpprhspg 413
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEE-LEEAEEELEEAEAELAEAEEALLEAEAEL------------------------ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 414 rgrsprrglspacsdsstLTLIHSALHKRQLQVQDMRGRYEASQELLgSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQ 493
Cdd:COG1196 375 ------------------AEAEEELEELAEELLEALRAAAELAAQLE-ELEEAEEALLERLERLEEELEELEEALAELEE 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 494 AQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELE 573
Cdd:COG1196 436 EEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 574 RSHRQLEQLEVKR-SGLTKELVEVREALSCAILQRDVLQTEK--AEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLS 650
Cdd:COG1196 516 LAGLRGLAGAVAVlIGVEAAYEAALEAALAAALQNIVVEDDEvaAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARG 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 651 KMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGslcvAEQAREALE 730
Cdd:COG1196 596 AIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSL----TGGSRRELL 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 731 QQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEA 810
Cdd:COG1196 672 AALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE 751
|
570 580 590
....*....|....*....|....*....|...
gi 568931104 811 IrlrLEKEALESSLFDVQRQLAQLEARREQLEA 843
Cdd:COG1196 752 A---LEELPEPPDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
890-1357 |
7.30e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 90.38 E-value: 7.30e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 890 EAQASLREQRAAHEEDLQRLQHE-KEAAWRELQAERAQLQGQLQqEREELLARMEAEKEELSKEIAALQQErdeglLLAE 968
Cdd:COG1196 206 ERQAEKAERYRELKEELKELEAElLLLKLRELEAELEELEAELE-ELEAELEELEAELAELEAELEELRLE-----LEEL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 969 SEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHA---QT 1045
Cdd:COG1196 280 ELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEeaeAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1046 VKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREA 1125
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1126 LRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVErsRLEARRELQELRRQMKTLDS 1205
Cdd:COG1196 440 EEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL--EAEADYEGFLEGVKAALLLA 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1206 DNGRLGRELADLQGRLALGERT--EKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQ--EQEAEFRARERGLLGSL 1281
Cdd:COG1196 518 GLRGLAGAVAVLIGVEAAYEAAleAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPldKIRARAALAAALARGAI 597
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1282 EEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLGL 1357
Cdd:COG1196 598 GAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA 673
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1090-1899 |
1.55e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.55e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1090 EAQRKGRDSQDSSEAHRQEASELRR---SLSEGAKEREALRRSNEELRSAvkkaesERISLKLANEDKEQKLALLEEARV 1166
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERqlkSLERQAEKAERYKELKAELREL------ELALLVLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1167 SVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGE 1246
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1247 SSLEALKQELQGSQRKLQEQEAEFRArergLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGL 1326
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELES----LEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1327 EVELARVEAQRRVAEAQLGGLRSALrrglglgrvsSSPAREAPAGGSGDglsspspleysprsqppspgLIASPAPPDLD 1406
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKL----------EEAELKELQAELEE--------------------LEEELEELQEE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1407 PEAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDhaasRAKQLQKAVAEsEEAWRSADRRLSGAQAELAL 1486
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQE----NLEGFSEGVKA-LLKNQSGLSGILGVLSELIS 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1487 QEESVRRSKRE-CRATLDqmAVLERSLQATESELrASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQ----- 1560
Cdd:TIGR02168 531 VDEGYEAAIEAaLGGRLQ--AVVVENLNAAKKAI-AFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGvakdl 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1561 -------RRALEGELQRSRLGlgDREAHAQALQDRVDSLQRQVadseVKAGTLQLTVERLSGALAKVEESEGNLRSKVQS 1633
Cdd:TIGR02168 608 vkfdpklRKALSYLLGGVLVV--DDLDNALELAKKLRPGYRIV----TLDGDLVRPGGVITGGSAKTNSSILERRREIEE 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1634 LTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEG 1713
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1714 QLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKL 1793
Cdd:TIGR02168 762 EIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1794 RSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNHnpvqpEAGEQQLELQQEVERLRSAQVQTERT 1873
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALA-----LLRSELEELSEELRELESKRSELRRE 916
|
810 820
....*....|....*....|....*....
gi 568931104 1874 LEA---RERAHRQRVSGLEEQVSTLKAQL 1899
Cdd:TIGR02168 917 LEElreKLAQLELRLEGLEVRIDNLQERL 945
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
566-1313 |
8.13e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.05 E-value: 8.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 566 ARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVL-QTEKAEVAEALTKAEAGRAQLElsltKLRAEEAS 644
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLkEKREYEGYELLKEKEALERQKE----AIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 645 LRDSLSKMSALNESLAQDKLELNRLIAQLEEeKVALLGRQQQAEHATTMAvekqelleqlrlEQEVERQGLQGSLCVAEQ 724
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNK-KIKDLGEEEQLRVKEKIG------------ELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 725 AREALEQQILVLRSERSHLQEQLAQLSR----------QLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAglaV 794
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEReieeerkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYR---E 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 795 KLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEK-- 872
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQEly 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 873 ------AALDKEL--MTQKLVQAEREAQASLREQR--AAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARM 942
Cdd:TIGR02169 473 dlkeeyDRVEKELskLQRELAEAEAQARASEERVRggRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 943 EAEKEELSKEIAAL------------------QQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEME 1004
Cdd:TIGR02169 553 VVEDDAVAKEAIELlkrrkagratflplnkmrDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1005 RQKRDAQSRQEQDRNTLN---ALTSELRDLRAQLEEATAAHAQtVKELEERTGNLGRQREACMREAEELRTQLRVLEDTR 1081
Cdd:TIGR02169 633 RRLMGKYRMVTLEGELFEksgAMTGGSRAPRGGILFSRSEPAE-LQRLRERLEGLKRELSSLQSELRRIENRLDELSQEL 711
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1082 DGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLAL- 1160
Cdd:TIGR02169 712 SDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHs 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1161 -----------LEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEK 1229
Cdd:TIGR02169 792 ripeiqaelskLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE 871
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1230 ESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEfRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAET 1309
Cdd:TIGR02169 872 ELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQ-IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE 950
|
....
gi 568931104 1310 SELG 1313
Cdd:TIGR02169 951 LSLE 954
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1002-1792 |
1.12e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.66 E-value: 1.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1002 EMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTR 1081
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1082 DGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSE-GAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLAL 1160
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDlGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAK 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1161 LEEARVSVAKEAGELRASLQEVERSRL-------EARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRR 1233
Cdd:TIGR02169 327 LEAEIDKLLAEIEELEREIEEERKRRDklteeyaELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKR 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1234 EALGLRQRLLKGESSLEALKQELQGsqrkLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELG 1313
Cdd:TIGR02169 407 ELDRLQEELQRLSEELADLNAAIAG----IEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1314 LRLSAaegraqgLEVELARVEAQRRVAEAQLGGLRSA---LRRGLG--------LGRVSS--SPAREAPAGGS------G 1374
Cdd:TIGR02169 483 KELSK-------LQRELAEAEAQARASEERVRGGRAVeevLKASIQgvhgtvaqLGSVGEryATAIEVAAGNRlnnvvvE 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1375 DGLSSPSPLEYSPRSQ--------------PPSPGLIASPAPP--------DLDPE---AVRDALRDFL--QELRSAQRE 1427
Cdd:TIGR02169 556 DDAVAKEAIELLKRRKagratflplnkmrdERRDLSILSEDGVigfavdlvEFDPKyepAFKYVFGDTLvvEDIEAARRL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1428 RDelKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAV 1507
Cdd:TIGR02169 636 MG--KYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1508 LERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAH------ 1581
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARlshsri 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1582 ------AQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHL 1655
Cdd:TIGR02169 794 peiqaeLSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEL 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1656 QKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEgEAMALRS 1735
Cdd:TIGR02169 874 EAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEE-IPEEELS 952
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568931104 1736 VQKLQEERRLLQERLGSLQ----RALAQLEAEKR---DLERSALQFDKDRVALRKTLDKVEREK 1792
Cdd:TIGR02169 953 LEDVQAELQRVEEEIRALEpvnmLAIQEYEEVLKrldELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1173-1835 |
3.04e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 3.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1173 GELRASLQEVERSRLEARReLQELRRQMKTLDSDngRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEAL 1252
Cdd:COG1196 196 GELERQLEPLERQAEKAER-YRELKEELKELEAE--LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1253 KQELQgsqrKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELAR 1332
Cdd:COG1196 273 RLELE----ELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1333 VEAQRRVAEAQLgglrsalrrglglgrvssspareapaggsgdglsspspleysprsqppspgliaspappdldpEAVRD 1412
Cdd:COG1196 349 AEEELEEAEAEL---------------------------------------------------------------AEAEE 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1413 ALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVR 1492
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALE 445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1493 RSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASE--SRSIKLELQRRALEGELQR 1570
Cdd:COG1196 446 EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEgfLEGVKAALLLAGLRGLAGA 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1571 SRLGLGDREAHAQALQDRVdslqrqvadsevkAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQD 1650
Cdd:COG1196 526 VAVLIGVEAAYEAALEAAL-------------AAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1651 KNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEA 1730
Cdd:COG1196 593 ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLA 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1731 MALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLD 1810
Cdd:COG1196 673 ALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEA 752
|
650 660
....*....|....*....|....*
gi 568931104 1811 RTLTGAELDLAEAQQQIQHLEAQVD 1835
Cdd:COG1196 753 LEELPEPPDLEELERELERLEREIE 777
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
670-1351 |
1.22e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.19 E-value: 1.22e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 670 IAQLEEEKVALLGR----QQQAEHATTMAVEKQELLEQLRLEQE--VERQGLQGSLCVAEQ-----AREALEQQILVLRS 738
Cdd:TIGR02169 165 VAEFDRKKEKALEEleevEENIERLDLIIDEKRQQLERLRREREkaERYQALLKEKREYEGyellkEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 739 ERSHLQEQLAQLSRQLSGRDQELEQA---LRESQRQVEAL--ERAAREKEAMAK---ERAGLAVKLAAAEREGRTLSEEA 810
Cdd:TIGR02169 245 QLASLEEELEKLTEEISELEKRLEEIeqlLEELNKKIKDLgeEEQLRVKEKIGEleaEIASLERSIAEKERELEDAEERL 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 811 IRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGL--------RQQVTSTEEKAALDKEL--- 879
Cdd:TIGR02169 325 AKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVdkefaetrDELKDYREKLEKLKREInel 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 880 -----MTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQA---ERAQLQGQLQQEREELLARmEAEKEELSK 951
Cdd:TIGR02169 405 kreldRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKqewKLEQLAADLSKYEQELYDL-KEEYDRVEK 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 952 EIAALQQErdegllLAESEKQQALSLKESEKTALSEKLMGTR----HSLAAISLEMERQ--------------------K 1007
Cdd:TIGR02169 484 ELSKLQRE------LAEAEAQARASEERVRGGRAVEEVLKASiqgvHGTVAQLGSVGERyataievaagnrlnnvvvedD 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1008 RDAQS------RQEQDRNT---LNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLE 1078
Cdd:TIGR02169 558 AVAKEaiellkRRKAGRATflpLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARRLMG 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1079 DTR-DGLRRELLE-------AQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLA 1150
Cdd:TIGR02169 638 KYRmVTLEGELFEksgamtgGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1151 NEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLA-------- 1222
Cdd:TIGR02169 718 IGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLShsripeiq 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1223 -LGERTEKESRREALGLR------QRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSA 1295
Cdd:TIGR02169 798 aELSKLEEEVSRIEARLReieqklNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAAL 877
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1296 RSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSAL 1351
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEEL 933
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
454-1221 |
2.79e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 82.04 E-value: 2.79e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 454 EASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAaSAQAQEDAQREAQRLRSAneLLSREKGNLTHSLQVTQQQAKEL 533
Cdd:TIGR02169 173 EKALEELEEVEENIERLDLIIDEKRQQLERLRRERE-KAERYQALLKEKREYEGY--ELLKEKEALERQKEAIERQLASL 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 534 RQELEKLQAAQEELKRQHNQLEDAQED--------SVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAIL 605
Cdd:TIGR02169 250 EEELEKLTEEISELEKRLEEIEQLLEElnkkikdlGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEA 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 606 QRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALN--------------ESLAQDKLELNRLIA 671
Cdd:TIGR02169 330 EIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFaetrdelkdyreklEKLKREINELKRELD 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 672 QLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLS 751
Cdd:TIGR02169 410 RLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQ 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 752 RQLS---GRDQELEQALRESQRQVEALERAAR------EKEAMAKERAGLAVKLAAAER------EGRTLSEEAIRLRLE 816
Cdd:TIGR02169 490 RELAeaeAQARASEERVRGGRAVEEVLKASIQgvhgtvAQLGSVGERYATAIEVAAGNRlnnvvvEDDAVAKEAIELLKR 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 817 KEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQV---TSTEEKAALDKELMTQ-KLVQAERE-- 890
Cdd:TIGR02169 570 RKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVfgdTLVVEDIEAARRLMGKyRMVTLEGElf 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 891 -----------AQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQgQLQQEREELLARMEAEK---EELSKEIAAL 956
Cdd:TIGR02169 650 eksgamtggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELR-RIENRLDELSQELSDASrkiGEIEKEIEQL 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 957 QQ------ERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMER-QKRDAQSRQEQDRNTLNALTSELR 1029
Cdd:TIGR02169 729 EQeeeklkERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlEARLSHSRIPEIQAELSKLEEEVS 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1030 DLRAQLEEataahaqtvkeLEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEA 1109
Cdd:TIGR02169 809 RIEARLRE-----------IEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAAL 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1110 SELRRSLSEGAKEREALRRSNEELRSAVKKAESERislklanEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEA 1189
Cdd:TIGR02169 878 RDLESRLGDLKKERDELEAQLRELERKIEELEAQI-------EKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE 950
|
810 820 830
....*....|....*....|....*....|....*...
gi 568931104 1190 ------RRELQELRRQMKTLDSDNGRLGRELADLQGRL 1221
Cdd:TIGR02169 951 lsledvQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL 988
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1420-1905 |
3.35e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.91 E-value: 3.35e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1420 ELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECR 1499
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1500 ATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDRE 1579
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1580 AHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKAL 1659
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1660 STCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELAS-------LELQRGDAEGQLQQLQQALRQRQEGEAMA 1732
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvkaalllAGLRGLAGAVAVLIGVEAAYEAALEAALA 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1733 LRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRT 1812
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGR 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1813 LTGAELDLAEAQQQIQHLEAQVDVALEGNH-NPVQPEAGEQQLELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEEQ 1891
Cdd:COG1196 626 TLVAARLEAALRRAVTLAGRLREVTLEGEGgSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE 705
|
490
....*....|....
gi 568931104 1892 VSTLKAQLHQELRR 1905
Cdd:COG1196 706 ERELAEAEEERLEE 719
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
743-1266 |
1.22e-14 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 79.96 E-value: 1.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 743 LQEQLAQLSRqlsgrdqeLEQALRESQRQVEALERAAREKEAMAKERAGLAVklAAAEREGRTLSEEAIRLRLEKEALEs 822
Cdd:COG4913 230 LVEHFDDLER--------AHEALEDAREQIELLEPIRELAERYAAARERLAE--LEYLRAALRLWFAQRRLELLEAELE- 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 823 slfDVQRQLAQLEARREQLEAdsqalllAKETLTGELAGLRQQVTS--TEEKAALDKEL--MTQKLVQAEREAQ------ 892
Cdd:COG4913 299 ---ELRAELARLEAELERLEA-------RLDALREELDELEAQIRGngGDRLEQLEREIerLERELEERERRRArleall 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 893 ASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQgQLQQEREELLARMEAEKEELSKEIAALQQER---DEGLLLAES 969
Cdd:COG4913 369 AALGLPLPASAEEFAALRAEAAALLEALEEELEALE-EALAEAEAALRDLRRELRELEAEIASLERRKsniPARLLALRD 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 970 EKQQALSLKESE-----------------KTALsEKLMGTRhslaAISLEMERQKRDAQSR---QEQDRNTLN---ALTS 1026
Cdd:COG4913 448 ALAEALGLDEAElpfvgelievrpeeerwRGAI-ERVLGGF----ALTLLVPPEHYAAALRwvnRLHLRGRLVyerVRTG 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1027 ELRDLRAQLEEATAAHAQTVKE------LEERtgnLGRQRE-ACMREAEELRTQLRVLedTRDGLRRELLEAQRK----- 1094
Cdd:COG4913 523 LPDPERPRLDPDSLAGKLDFKPhpfrawLEAE---LGRRFDyVCVDSPEELRRHPRAI--TRAGQVKGNGTRHEKddrrr 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1095 -------GRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELR------SAVKKAESERISLKLANE---DKEQKL 1158
Cdd:COG4913 598 irsryvlGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQerrealQRLAEYSWDEIDVASAEReiaELEAEL 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1159 ALLEEARVSVAkeagELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGL 1238
Cdd:COG4913 678 ERLDASSDDLA----ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEE 753
|
570 580
....*....|....*....|....*...
gi 568931104 1239 RQRLLKGESSLEALKQELQGSQRKLQEQ 1266
Cdd:COG4913 754 RFAAALGDAVERELRENLEERIDALRAR 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1419-1895 |
2.13e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 2.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1419 QELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKREC 1498
Cdd:COG1196 309 ERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1499 RATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDR 1578
Cdd:COG1196 389 LEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAEL 468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1579 EAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGN-LRSKVQSLTDALTQSSASLSSTQDKNLHLQK 1657
Cdd:COG1196 469 LEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLaGLRGLAGAVAVLIGVEAAYEAALEAALAAAL 548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1658 ALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQ 1737
Cdd:COG1196 549 QNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV 628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1738 KLQEE-----RRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRT 1812
Cdd:COG1196 629 AARLEaalrrAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1813 LTGAELDLAEAQQQIQHLEAQVDVALEgnhnpvqpeageQQLELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEEQV 1892
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAERE------------ELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
...
gi 568931104 1893 STL 1895
Cdd:COG1196 777 EAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
910-1622 |
4.11e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.10 E-value: 4.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 910 QHEKEAAWRELQAERAQLQGQLQQEREELlARMEAEKEELSKEIAALQQERDEglllaESEKQQALSLKES-EKTALSEK 988
Cdd:TIGR02169 225 GYELLKEKEALERQKEAIERQLASLEEEL-EKLTEEISELEKRLEEIEQLLEE-----LNKKIKDLGEEEQlRVKEKIGE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 989 LMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQ---TVKELEERTGNLGRQREACMR 1065
Cdd:TIGR02169 299 LEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKlteEYAELKEELEDLRAELEEVDK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1066 EAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERI 1145
Cdd:TIGR02169 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1146 SLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQG------ 1219
Cdd:TIGR02169 459 QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSvgerya 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1220 ---RLALGER--------------------TEKESRREALGLRqRLLKGESSLEALKQE-LQGSQRKLQEQEAEFRA--- 1272
Cdd:TIGR02169 539 taiEVAAGNRlnnvvveddavakeaiellkRRKAGRATFLPLN-KMRDERRDLSILSEDgVIGFAVDLVEFDPKYEPafk 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1273 ---RERGLLGSLEEARgaekRLLDSARSLELRLEAVRAETSELG--LRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGL 1347
Cdd:TIGR02169 618 yvfGDTLVVEDIEAAR----RLMGKYRMVTLEGELFEKSGAMTGgsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSL 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1348 RSALRRGLGLGRVSSSPAREApaggsgdglsSPSPLEYSPRSQPPspgliaspappDLDPEAVRDALRDFLQELRSAQRE 1427
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDA----------SRKIGEIEKEIEQL-----------EQEEEKLKERLEELEEDLSSLEQE 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1428 RDELKVQTSTLSQQLVEMEA------------ERDHAASRAKQLQ-------KAVAESEEAWRSADRRLSGAQAELALQE 1488
Cdd:TIGR02169 753 IENVKSELKELEARIEELEEdlhkleealndlEARLSHSRIPEIQaelskleEEVSRIEARLREIEQKLNRLTLEKEYLE 832
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1489 ESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGEL 1568
Cdd:TIGR02169 833 KEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQI 912
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1569 QRSRLGLGDREAHAQALQDRVDSLQRQVAD------SEVKAGTLQLTVERLSGALAKVEE 1622
Cdd:TIGR02169 913 EKKRKRLSELKAKLEALEEELSEIEDPKGEdeeipeEELSLEDVQAELQRVEEEIRALEP 972
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
642-1289 |
5.11e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.18 E-value: 5.11e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 642 EASLRDSLSKMSALNESLAQ---DKLELNRLIAQLEEEKvallGRQQQAEHATTMAVEKQELLEQLRLEQEVERQglqgs 718
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDfdfDAKEDNRADEATEEAF----GKAEEAKKTETGKAEEARKAEEAKKKAEDARK----- 1129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 719 lcvAEQAREALEqqilVLRSERSHLQEQLAQLSRQLSGRD-QELEQALR-ESQRQVEALERAAREKEAMAKERAGLAVKL 796
Cdd:PTZ00121 1130 ---AEEARKAED----ARKAEEARKAEDAKRVEIARKAEDaRKAEEARKaEDAKKAEAARKAEEVRKAEELRKAEDARKA 1202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 797 AAAER-EGRTLSEEAIRLRLEKEALESSLFDVQRQLAQlEARREQLEADSQALLLAKETLTGELAGlRQQVTSTEEKAAL 875
Cdd:PTZ00121 1203 EAARKaEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE-EAKKAEEERNNEEIRKFEEARMAHFAR-RQAAIKAEEARKA 1280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 876 DKElmtqklvqaeREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARmEAEKEELSKEIAA 955
Cdd:PTZ00121 1281 DEL----------KKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKK-KAEEAKKAAEAAK 1349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 956 LQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGtrhslaaiSLEMERQKRDAQSRQEQDRNtlnaltsELRDLRAQL 1035
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKK--------KAEEKKKADEAKKKAEEDKK-------KADELKKAA 1414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1036 EEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRREllEAQRKGRDSQDSSEAHRQeASELRRS 1115
Cdd:PTZ00121 1415 AAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKA--EEAKKADEAKKKAEEAKK-ADEAKKK 1491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1116 LSEGAKEREALRRSNEELRSA--VKKAESERislklanedKEQKLALLEEARvsvakEAGELRASlqeVERSRLEARREL 1193
Cdd:PTZ00121 1492 AEEAKKKADEAKKAAEAKKKAdeAKKAEEAK---------KADEAKKAEEAK-----KADEAKKA---EEKKKADELKKA 1554
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1194 QELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALK-QELQGSQRKLQEQEAEFRA 1272
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKaEEAKIKAEELKKAEEEKKK 1634
|
650
....*....|....*..
gi 568931104 1273 RERGLLGSLEEARGAEK 1289
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEE 1651
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
737-1341 |
8.97e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.02 E-value: 8.97e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 737 RSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAERegrtlSEEAIRLRLE 816
Cdd:PTZ00121 1071 GLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARK-----AEDARKAEEA 1145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 817 KEALESSLFDVQRQLAqlEARREQLEADsqalllAKETLTGELAGLRQQVTSTEE--KAALDKELMTQKLVQAEREAQAS 894
Cdd:PTZ00121 1146 RKAEDAKRVEIARKAE--DARKAEEARK------AEDAKKAEAARKAEEVRKAEElrKAEDARKAEAARKAEEERKAEEA 1217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 895 LREQRAAHEEDLQRLQhekEAAWRELQAERAQLQGQLQQEREELLARMeAEKEELSKEIAALQQERDEGLLLAEsEKQQA 974
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAE---EAKKDAEEAKKAEEERNNEEIRKFEEARM-AHFARRQAAIKAEEARKADELKKAE-EKKKA 1292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 975 LSLKESEKTALSEKLMGtrhslaaiSLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELE---E 1051
Cdd:PTZ00121 1293 DEAKKAEEKKKADEAKK--------KAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEaaeE 1364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1052 RTGNLGRQREACMREAEELRTQLRVLEDTRDGLRREllEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNE 1131
Cdd:PTZ00121 1365 KAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKA--EEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1132 ELRS--AVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGR 1209
Cdd:PTZ00121 1443 AKKAdeAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAK 1522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1210 LGRELADLQGRLALGERTEKESRREALGLRQrllkgESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEK 1289
Cdd:PTZ00121 1523 KADEAKKAEEAKKADEAKKAEEKKKADELKK-----AEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1290 RLLDSARSLELRLEAVRAETSEL-GLRLSAAEGRAQGLEVELARVEAQRRVAE 1341
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIkAEELKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
503-1141 |
1.11e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.61 E-value: 1.11e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 503 QRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEklqaAQEELKRQHNQLEDAQEDSVQ------EGARARRE--LER 574
Cdd:pfam15921 92 RRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERD----AMADIRRRESQSQEDLRNQLQntvhelEAAKCLKEdmLED 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 575 SHRQLEQLE---VKRSGLTKE----LVEVREALSCAILQRDVLQTEK-AEVAEALTKAeagRAQLELSLTKLRAEEASLR 646
Cdd:pfam15921 168 SNTQIEQLRkmmLSHEGVLQEirsiLVDFEEASGKKIYEHDSMSTMHfRSLGSAISKI---LRELDTEISYLKGRIFPVE 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 647 DSLSKMsalnESLAQDKLEL------NRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLR--------------- 705
Cdd:pfam15921 245 DQLEAL----KSESQNKIELllqqhqDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQeqarnqnsmymrqls 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 706 -LEQEVE--RQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREK 782
Cdd:pfam15921 321 dLESTVSqlRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQN 400
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 783 EAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALES------------------SLFDVQRQLAQLEARREQLEAD 844
Cdd:pfam15921 401 KRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSecqgqmerqmaaiqgkneSLEKVSSLTAQLESTKEMLRKV 480
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 845 SQALLLAKETLTGELAGLRQQVTSTEEK---------------AALDKELMTQKLVQAE----REAQA---SLREQRAAH 902
Cdd:pfam15921 481 VEELTAKKMTLESSERTVSDLTASLQEKeraieatnaeitklrSRVDLKLQELQHLKNEgdhlRNVQTeceALKLQMAEK 560
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQHEKEAAWR----------ELQAERAQLQGQLQQEREELLA------RMEAEKEELSKEIAALQQERDEgLLL 966
Cdd:pfam15921 561 DKVIEILRQQIENMTQlvgqhgrtagAMQVEKAQLEKEINDRRLELQEfkilkdKKDAKIRELEARVSDLELEKVK-LVN 639
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 967 AESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATaahaQTV 1046
Cdd:pfam15921 640 AGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTR----NTL 715
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1047 KELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREAL 1126
Cdd:pfam15921 716 KSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVL 795
|
730
....*....|....*
gi 568931104 1127 RRSNEELRSAVKKAE 1141
Cdd:pfam15921 796 RSQERRLKEKVANME 810
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1528-1890 |
1.56e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1528 KMKATEAKLEsdkrRLKEVLDASESRSIKLELQRRALE--GELQRSRlglgdREAHAQALQDRVDSLQRQVADSEVKAGT 1605
Cdd:COG1196 180 KLEATEENLE----RLEDILGELERQLEPLERQAEKAEryRELKEEL-----KELEAELLLLKLRELEAELEELEAELEE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1606 LQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALSEARR 1685
Cdd:COG1196 251 LEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEE 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1686 QSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKR 1765
Cdd:COG1196 331 ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEE 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1766 DLERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEgnhnpv 1845
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE------ 484
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568931104 1846 QPEAGEQQLELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEE 1890
Cdd:COG1196 485 ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVL 529
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
442-1223 |
2.57e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 72.41 E-value: 2.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 442 RQLQVQDMRGRYEASQELLGSVRK----QLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQR-------EAQRLRSANE 510
Cdd:TIGR02169 288 EQLRVKEKIGELEAEIASLERSIAekerELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKrrdklteEYAELKEELE 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 511 LLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLT 590
Cdd:TIGR02169 368 DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 591 KELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLI 670
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTV 527
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 671 AQL------------------------EEEKVAL----LGRQQQAEHATTMAVEK----QELLEQLRLE----------- 707
Cdd:TIGR02169 528 AQLgsvgeryataievaagnrlnnvvvEDDAVAKeaieLLKRRKAGRATFLPLNKmrdeRRDLSILSEDgvigfavdlve 607
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 708 -----QEVERQGLQGSLCVA--EQAREALEQQILVLrsershLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAR 780
Cdd:TIGR02169 608 fdpkyEPAFKYVFGDTLVVEdiEAARRLMGKYRMVT------LEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRE 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 781 EKEAMAKERAGLAVKLAAAERegrtlseeairlrlEKEALESSLFDVQRQLAQLEARREQLEADsqalllaKETLTGELA 860
Cdd:TIGR02169 682 RLEGLKRELSSLQSELRRIEN--------------RLDELSQELSDASRKIGEIEKEIEQLEQE-------EEKLKERLE 740
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 861 GLRQQVTSTEEKAAldkelmtqklvqAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLA 940
Cdd:TIGR02169 741 ELEEDLSSLEQEIE------------NVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVS 808
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 941 RMEAEKEELSKEIAALQQERDegllLAESEKQqalslkesektalseklmgtrhslaaislEMERQKRDAQSRQEQDRNT 1020
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKE----YLEKEIQ-----------------------------ELQEQRIDLKEQIKSIEKE 855
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1021 LNALTSELRDLRAQLEEATAAhaqtVKELEERTGNLGRQReacmreaEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQD 1100
Cdd:TIGR02169 856 IENLNGKKEELEEELEELEAA----LRDLESRLGDLKKER-------DELEAQLRELERKIEELEAQIEKKRKRLSELKA 924
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1101 SSEAHRQEASELRRSLSEGAKEREALrRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARvsvaKEAGELRASLQ 1180
Cdd:TIGR02169 925 KLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRL----DELKEKRAKLE 999
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 568931104 1181 EVERSRLEARRELQELRRQ--MKTLDSDN---GRLGRELADLQGRLAL 1223
Cdd:TIGR02169 1000 EERKAILERIEEYEKKKREvfMEAFEAINenfNEIFAELSGGTGELIL 1047
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
816-1571 |
3.75e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 72.10 E-value: 3.75e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 816 EKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEE--KAALDKELMTQKLVQAEREAQA 893
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEarKAEDAKRVEIARKAEDARKAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 894 SLREQRAAHEEDLQRLQHEKEAawRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQ 973
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKAEEVRKA--EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAE 1246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 974 ALSLKESEKTALSEKLMGTRHSLAAISLEmERQKRDAQSRQEQDRNTLNALTSELRDlRAQLEEATAAHAQTVKELEERT 1053
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQAAIKAE-EARKADELKKAEEKKKADEAKKAEEKK-KADEAKKKAEEAKKADEAKKKA 1324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1054 GNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEEL 1133
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK 1404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1134 RSA--VKKAESERislKLANEDKEQKlallEEARvsvakEAGELRASLQEVERSRlEARRELQELRRqmktldSDNGRLG 1211
Cdd:PTZ00121 1405 KKAdeLKKAAAAK---KKADEAKKKA----EEKK-----KADEAKKKAEEAKKAD-EAKKKAEEAKK------AEEAKKK 1465
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1212 REladlQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEfRARERGLLGSLEEARGAEkrl 1291
Cdd:PTZ00121 1466 AE----EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE-EAKKADEAKKAEEAKKAD--- 1537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1292 ldsarslelrlEAVRAETSELGLRLSAAEgraqglevELARVEAQRRVAEAQlgglRSALRRGLGLGRVssspareapag 1371
Cdd:PTZ00121 1538 -----------EAKKAEEKKKADELKKAE--------ELKKAEEKKKAEEAK----KAEEDKNMALRKA----------- 1583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1372 gsgdglsspsplEYSPRSQPPSPGLIASPAPPDLDPEAvrdalrdflQELRSAQRERDElkvqtstlSQQLVEMEAERDH 1451
Cdd:PTZ00121 1584 ------------EEAKKAEEARIEEVMKLYEEEKKMKA---------EEAKKAEEAKIK--------AEELKKAEEEKKK 1634
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1452 AASRAKQLQKAVAESEEAwRSADRRLSGAQAELALQEESVRRSKRECRATldqmavlERSLQATESELRASQEKVSKMKA 1531
Cdd:PTZ00121 1635 VEQLKKKEAEEKKKAEEL-KKAEEENKIKAAEEAKKAEEDKKKAEEAKKA-------EEDEKKAAEALKKEAEEAKKAEE 1706
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 568931104 1532 TEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRS 1571
Cdd:PTZ00121 1707 LKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKA 1746
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1408-1899 |
3.76e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.89 E-value: 3.76e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1408 EAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQ 1487
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1488 EESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGE 1567
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1568 LQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSS 1647
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1648 tqdknLHLQKALSTCEHDRQVLQERLDAARQALseARRQSSSLGEQVQTLRGELAS-LELQRGDAEGQLQQLQQALRQRQ 1726
Cdd:COG1196 524 -----GAVAVLIGVEAAYEAALEAALAAALQNI--VVEDDEVAAAAIEYLKAAKAGrATFLPLDKIRARAALAAALARGA 596
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1727 EGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVAL---------RKTLDKVEREKLRSHE 1797
Cdd:COG1196 597 IGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLegeggsaggSLTGGSRRELLAALLE 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1798 DTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNHNPVQPEAGEQQLELQQEVERLRSAQVQTERTLEAR 1877
Cdd:COG1196 677 AEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEEL 756
|
490 500
....*....|....*....|..
gi 568931104 1878 ERAhrQRVSGLEEQVSTLKAQL 1899
Cdd:COG1196 757 PEP--PDLEELERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1408-1919 |
3.95e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.89 E-value: 3.95e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1408 EAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQ 1487
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEL 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1488 EESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLkevldasESRSIKLELQRRALEGE 1567
Cdd:COG1196 343 EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAEL-------AAQLEELEEAEEALLER 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1568 LQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSS 1647
Cdd:COG1196 416 LERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1648 tqDKNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQE 1727
Cdd:COG1196 496 --LLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGR 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1728 GEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDlERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERG 1807
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD-ARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLE 652
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1808 RLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNHNPVQPEAGEQQLELQQEVERLRSAQVQTERTLEARERAHRQRVSG 1887
Cdd:COG1196 653 GEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA 732
|
490 500 510
....*....|....*....|....*....|..
gi 568931104 1888 LEEQVSTLKAQLHQELRRSSASVSLPPGTPEK 1919
Cdd:COG1196 733 EREELLEELLEEEELLEEEALEELPEPPDLEE 764
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
479-1034 |
5.00e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.48 E-value: 5.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 479 EQLQRLRDQTAASAQAQEDAQR--------EAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQ 550
Cdd:COG4913 252 ELLEPIRELAERYAAARERLAEleylraalRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQ 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 551 HNQ--------LEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALScaiLQRDVLQTEKAEVAEALT 622
Cdd:COG4913 332 IRGnggdrleqLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAA---ALLEALEEELEALEEALA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 623 KAEAGRAQLELSLTKLRAEEASLRDSLSKM--------SALNESLAQDKLELnRLIAQL----EEEKV------ALLGRQ 684
Cdd:COG4913 409 EAEAALRDLRRELRELEAEIASLERRKSNIparllalrDALAEALGLDEAEL-PFVGELievrPEEERwrgaieRVLGGF 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 685 qqaehATTMAVEKQELLEQLRLeqeVERQGLQGSLcVAEQAREALEQQILVLRSERShlqeqlaqLSRQLSGRDQELEQA 764
Cdd:COG4913 488 -----ALTLLVPPEHYAAALRW---VNRLHLRGRL-VYERVRTGLPDPERPRLDPDS--------LAGKLDFKPHPFRAW 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 765 LRESQRQVEALERAAREKEAmakERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALessL-FDVQRQLAQLEARREQLEA 843
Cdd:COG4913 551 LEAELGRRFDYVCVDSPEEL---RRHPRAITRAGQVKGNGTRHEKDDRRRIRSRYV---LgFDNRAKLAALEAELAELEE 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 844 DSQALLLAKETLTGELAGLRQQVTSTEEKAALDkelmtqklvqAEREAQASLREQRAAHEEDLQRLQhEKEAAWRELQAE 923
Cdd:COG4913 625 ELAEAEERLEALEAELDALQERREALQRLAEYS----------WDEIDVASAEREIAELEAELERLD-ASSDDLAALEEQ 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 924 RAQLQGQLQQEREElLARMEAEKEELSKEIAALQQERDEglllAESEKQQALSLKESEKTALSEKlmgtRHSLAAISLEM 1003
Cdd:COG4913 694 LEELEAELEELEEE-LDELKGEIGRLEKELEQAEEELDE----LQDRLEAAEDLARLELRALLEE----RFAAALGDAVE 764
|
570 580 590
....*....|....*....|....*....|.
gi 568931104 1004 ERQKRDAQSRQEQDRNTLNALTSELRDLRAQ 1034
Cdd:COG4913 765 RELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
76-593 |
5.93e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.12 E-value: 5.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 76 ASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVNERDTEhsqdLDSALLRLEE----EQQRSASLAQVNAML 151
Cdd:COG1196 246 AELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE----LLAELARLEQdiarLEERRRELEERLEEL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 152 REQLDQANLANQALSEDIRKVTSDWTRSCKELEQREAVWRREEESFNTYFSSEH---SRLLRLWRQVMGLRRQASEVKMG 228
Cdd:COG1196 322 EEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAeaeEELEELAEELLEALRAAAELAAQ 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 229 TERDLLQLGGELVRTSRAVQELGLGLSASLHRAESKAEAALEKQKLLQAQLEEQLQAKLLREKDLAQLQVQSDLDKADLS 308
Cdd:COG1196 402 LEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 309 ARVTELALSVEHLQNQNSEKDQ----------VNRTLSDKLEALESLRLQEQTTLDTEDGEGLQQTLRDLAQAALSDTES 378
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEADYegflegvkaaLLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAA 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 379 GVQLSSSERTADTSDGSLRGFSGQRTPTPPRHSPGRGRSPRRGLSPACSDSSTLTLIHSALHKRQLQVQDMRGRYEASQE 458
Cdd:COG1196 562 AIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 459 LLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELE 538
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEEL 721
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 539 KLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKEL 593
Cdd:COG1196 722 EEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
434-1219 |
9.04e-12 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 70.76 E-value: 9.04e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 434 LIHSALHKRQlQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTaASAQAQEDAQREAQRLRSA-NELL 512
Cdd:PRK04863 284 HLEEALELRR-ELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIERYQADlEELE 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 513 SRekgnLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQE-------------DSVQEGARARRELERSHRQL 579
Cdd:PRK04863 362 ER----LEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQaldvqqtraiqyqQAVQALERAKQLCGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 580 EQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRdsLSKMSALNESL 659
Cdd:PRK04863 438 DNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSEAWDVARELLRR--LREQRHLAEQL 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 660 AQDKLELNRLIAQLEEEKvALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSE 739
Cdd:PRK04863 516 QQLRMRLSELEQRLRQQQ-RAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQLEQLQAR 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 740 RSHL----------QEQLAQLSRQlSGRDQELEQALRESQRQVEALERAAREkeamakERAGLAVKLAAAEREGRTLS-- 807
Cdd:PRK04863 595 IQRLaarapawlaaQDALARLREQ-SGEEFEDSQDVTEYMQQLLERERELTV------ERDELAARKQALDEEIERLSqp 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 808 --EEAIRLRLEKE----ALESSLFD----------------------------VQRQLAQLEARREQL---EADSQAL-- 848
Cdd:PRK04863 668 ggSEDPRLNALAErfggVLLSEIYDdvsledapyfsalygparhaivvpdlsdAAEQLAGLEDCPEDLyliEGDPDSFdd 747
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 849 ------LLAKEtLTGELAGLRQQVTSTEE-----KAALDKELmtqKLVQAEREAQASLREQRAAHEEDLQRLQH------ 911
Cdd:PRK04863 748 svfsveELEKA-VVVKIADRQWRYSRFPEvplfgRAAREKRI---EQLRAEREELAERYATLSFDVQKLQRLHQafsrfi 823
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 912 ----------EKEAAWRELQAERAQLQGQLQQEREELL---ARMEAEKEELSkeiaALQQERDE-GLLLAESEKQQALSL 977
Cdd:PRK04863 824 gshlavafeaDPEAELRQLNRRRVELERALADHESQEQqqrSQLEQAKEGLS----ALNRLLPRlNLLADETLADRVEEI 899
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 978 KESEKTALSEKLMGTRHSLAAISLE---------------MERQKRDAQSRQEQDRNTLNALTsELRDLRAQLeeataAH 1042
Cdd:PRK04863 900 REQLDEAEEAKRFVQQHGNALAQLEpivsvlqsdpeqfeqLKQDYQQAQQTQRDAKQQAFALT-EVVQRRAHF-----SY 973
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1043 AQTVKELEERTGNlgrqreacmreAEELRTQLRVLEDTRDGLRRELLEAQRKGRDS-------QDSSEAHRQEASELRRS 1115
Cdd:PRK04863 974 EDAAEMLAKNSDL-----------NEKLRQRLEQAEQERTRAREQLRQAQAQLAQYnqvlaslKSSYDAKRQMLQELKQE 1042
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1116 LS-------EGAKEREALRRsnEELRSAVKKAESERISLklanedkEQKLALLEEARVSVAKEAGELRASLQEVERSRLE 1188
Cdd:PRK04863 1043 LQdlgvpadSGAEERARARR--DELHARLSANRSRRNQL-------EKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVN 1113
|
890 900 910
....*....|....*....|....*....|.
gi 568931104 1189 ARRELQELRRQMKTLDSDNGRLGRELADLQG 1219
Cdd:PRK04863 1114 AKAGWCAVLRLVKDNGVERRLHRRELAYLSA 1144
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
496-1139 |
1.06e-11 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 70.64 E-value: 1.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 496 EDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQEL----EKLQAAQEELKRQHNQLEDAQEDSVQEGARARRE 571
Cdd:pfam12128 269 SDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELsaadAAVAKDRSELEALEDQHGAFLDADIETAAADQEQ 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 572 LERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDvlqtekAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSk 651
Cdd:pfam12128 349 LPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIK------EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALE- 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 652 mSALNESLAQDKLELN----RLIAQLEEEKVALLGRQQQAEHATTMAVeKQELLEQLRLEQEVERQGlqgslcvaeqaRE 727
Cdd:pfam12128 422 -SELREQLEAGKLEFNeeeyRLKSRLGELKLRLNQATATPELLLQLEN-FDERIERAREEQEAANAE-----------VE 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 728 ALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGlavKLAAAEREGRT-- 805
Cdd:pfam12128 489 RLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIG---KVISPELLHRTdl 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 806 ------------LSEEAIRLRLEKEALESSLFDVQrqlaQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKA 873
Cdd:pfam12128 566 dpevwdgsvggeLNLYGVKLDLKRIDVPEWAASEE----ELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREE 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 874 ALDK------ELMTQKLVQAEREAQASLREQRAAH----EEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARME 943
Cdd:pfam12128 642 TFARtalknaRLDLRRLFDEKQSEKDKKNKALAERkdsaNERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQ 721
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 944 AEKEELSKEIAALQQERDEgllLAESEKQQALSLKESEKTALS------EKLMGTRHSLAAISLEMERQKRDAQSRQEQD 1017
Cdd:pfam12128 722 VVEGALDAQLALLKAAIAA---RRSGAKAELKALETWYKRDLAslgvdpDVIAKLKREIRTLERKIERIAVRRQEVLRYF 798
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1018 RNTLNALTSELRDLRAQLEEataahaqTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDglrrELLEAQRKGRD 1097
Cdd:pfam12128 799 DWYQETWLQRRPRLATQLSN-------IERAISELQQQLARLIADTKLRRAKLEMERKASEKQQV----RLSENLRGLRC 867
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 568931104 1098 SQD--SSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKK 1139
Cdd:pfam12128 868 EMSklATLKEDANSEQAQGSIGERLAQLEDLKLKRDYLSESVKK 911
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
819-1327 |
1.38e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.07 E-value: 1.38e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 819 ALESSLFDVQRQLAQLEARREQLE-ADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAE--REAQASL 895
Cdd:PRK02224 177 GVERVLSDQRGSLDQLKAQIEEKEeKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEerREELETL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 896 REQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGqLQQEREELLAR----------MEAEKEELSKEIAALQQERDEGLL 965
Cdd:PRK02224 257 EAEIEDLRETIAETEREREELAEEVRDLRERLEE-LEEERDDLLAEaglddadaeaVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 966 LAESEKQQALSLKESEKTaLSEKLMGTRHSLAAISLEMERQKRDAQSRQEQdrntLNALTSELRDLRAQLEEATAAHAQT 1045
Cdd:PRK02224 336 AAQAHNEEAESLREDADD-LEERAEELREEAAELESELEEAREAVEDRREE----IEELEEEIEELRERFGDAPVDLGNA 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1046 VKELEERTGNLGRQREacmrEAEELRTQLRVLEDTRDGlRRELLEAQR--------KGRDSQDSSEAHRQEASELRRSLS 1117
Cdd:PRK02224 411 EDFLEELREERDELRE----REAELEATLRTARERVEE-AEALLEAGKcpecgqpvEGSPHVETIEEDRERVEELEAELE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1118 EGAKEREALRR---SNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVA---KEAGELRASLQEVERSRLEARR 1191
Cdd:PRK02224 486 DLEEEVEEVEErleRAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEelrERAAELEAEAEEKREAAAEAEE 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1192 ELQELRRQMKTLDSDNGRLGRELADLQG-RLALGERTEKESRREALglRQRLlkgesslealkQELQGSQRKLQEQEAEF 1270
Cdd:PRK02224 566 EAEEAREEVAELNSKLAELKERIESLERiRTLLAAIADAEDEIERL--REKR-----------EALAELNDERRERLAEK 632
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1271 RARERGLLGS-----LEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLE 1327
Cdd:PRK02224 633 RERKRELEAEfdearIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELE 694
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
477-962 |
6.28e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 67.76 E-value: 6.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 477 LEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLED 556
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRV 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 557 AQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLT 636
Cdd:PRK02224 336 AAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 637 KLRAEEASLRDSLSKMSALNESLAQDKLELNRLiaqLEEEKVALLGRQ-QQAEHATTMA--VEKQELLEQLRLEQEVERQ 713
Cdd:PRK02224 416 ELREERDELREREAELEATLRTARERVEEAEAL---LEAGKCPECGQPvEGSPHVETIEedRERVEELEAELEDLEEEVE 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 714 GLQGSLCVAEQAREAlEQQILVLRSERSHLQEQLAQlSRQLSGRDQELEQALREsqrQVEALERAAREKEAMAKEragla 793
Cdd:PRK02224 493 EVEERLERAEDLVEA-EDRIERLEERREDLEELIAE-RRETIEEKRERAEELRE---RAAELEAEAEEKREAAAE----- 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 794 vklaaaeregrtlseeairLRLEKEALESSLFDVQRQLAQLEARREQLEadsqalllAKETLTGELAGLRQQVTSTEEKA 873
Cdd:PRK02224 563 -------------------AEEEAEEAREEVAELNSKLAELKERIESLE--------RIRTLLAAIADAEDEIERLREKR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 874 ALDKELMTQklvqaEREAQASLREQRAAHEEDLQrlqhekEAAWRELQAERAQLQgQLQQEREELLARMEAEKEELSKEI 953
Cdd:PRK02224 616 EALAELNDE-----RRERLAEKRERKRELEAEFD------EARIEEAREDKERAE-EYLEQVEEKLDELREERDDLQAEI 683
|
....*....
gi 568931104 954 AALQQERDE 962
Cdd:PRK02224 684 GAVENELEE 692
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
712-1306 |
6.56e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.78 E-value: 6.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 712 RQGLQGSLCVAEQAREALEQQILVL-RSERSHlqEQLAQLSRQLSGRDQELEQALRESQ-------RQVEALERAAREKE 783
Cdd:PRK03918 133 RQGEIDAILESDESREKVVRQILGLdDYENAY--KNLGEVIKEIKRRIERLEKFIKRTEnieelikEKEKELEEVLREIN 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 784 AMAKERAGLAVKLAAAEREGRTLS---EEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALllakETLTGELA 860
Cdd:PRK03918 211 EISSELPELREELEKLEKEVKELEelkEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEEL----EEKVKELK 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 861 GLRQQVTSTEEKAALDKELmTQKLVQAEREAqASLREQRAAHEEDLQRLQhEKEAAWRELQAERAQLQGQLQ--QEREEL 938
Cdd:PRK03918 287 ELKEKAEEYIKLSEFYEEY-LDELREIEKRL-SRLEEEINGIEERIKELE-EKEERLEELKKKLKELEKRLEelEERHEL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 939 LAR---MEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRD-----A 1010
Cdd:PRK03918 364 YEEakaKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKcpvcgR 443
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1011 QSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREacMREAEELRTQLRVLEDTRDGLRRELLE 1090
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESE--LIKLKELAEQLKELEEKLKKYNLEELE 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1091 AQRKgrdsqdSSEAHRQEASELR---RSLSEGAKEREALRRSNEELRSAVKKAESERISLklanedkeqkLALLEEARVS 1167
Cdd:PRK03918 522 KKAE------EYEKLKEKLIKLKgeiKSLKKELEKLEELKKKLAELEKKLDELEEELAEL----------LKELEELGFE 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1168 VAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKE--------SRREALGLR 1239
Cdd:PRK03918 586 SVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEleelekkySEEEYEELR 665
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1240 QRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERgllgSLEEARGAEKRLLDSARSLElRLEAVR 1306
Cdd:PRK03918 666 EEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE----ELEEREKAKKELEKLEKALE-RVEELR 727
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
721-1275 |
1.38e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 66.60 E-value: 1.38e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 721 VAEQAREALEQ-QILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVkLAAA 799
Cdd:PRK02224 181 VLSDQRGSLDQlKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELET-LEAE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 800 EREGRTLSEEAIRlrlEKEALESSLFDVQRQLAQLEARREQL-------EADSQALLLAKETLTGELAGLRQqvtsteek 872
Cdd:PRK02224 260 IEDLRETIAETER---EREELAEEVRDLRERLEELEEERDDLlaeagldDADAEAVEARREELEDRDEELRD-------- 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 873 aaldkELMTQKLVQAEREAQA-SLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQgqlqqEREELLARMEAEKEELSK 951
Cdd:PRK02224 329 -----RLEECRVAAQAHNEEAeSLREDADDLEERAEELREEAAELESELEEAREAVE-----DRREEIEELEEEIEELRE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 952 EIAALQQERDEglllAESEkqqaLSLKESEKTALSEKLMGTRHSL--AAISLEMERQKRDA---------------QSRQ 1014
Cdd:PRK02224 399 RFGDAPVDLGN----AEDF----LEELREERDELREREAELEATLrtARERVEEAEALLEAgkcpecgqpvegsphVETI 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1015 EQDRNTLNALTSELRDLRAQLEEATAAH--AQTVKELEERTGNLGRQREACMR-------EAEELRTQLRVLEDTRDGLR 1085
Cdd:PRK02224 471 EEDRERVEELEAELEDLEEEVEEVEERLerAEDLVEAEDRIERLEERREDLEEliaerreTIEEKRERAEELRERAAELE 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1086 RELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSnEELRSAVKKAESERISLKlaneDKEQKLALLEEAR 1165
Cdd:PRK02224 551 AEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERI-RTLLAAIADAEDEIERLR----EKREALAELNDER 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1166 VSVAKEAGELRASLQ-EVERSRLE-ARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRRealgLRQRLL 1243
Cdd:PRK02224 626 RERLAEKRERKRELEaEFDEARIEeAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEE----LRERRE 701
|
570 580 590
....*....|....*....|....*....|..
gi 568931104 1244 KGESSLEALkQELQGSQRKLQEQEAEFRARER 1275
Cdd:PRK02224 702 ALENRVEAL-EALYDEAEELESMYGDLRAELR 732
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
442-948 |
2.01e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 66.09 E-value: 2.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 442 RQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQ-EDAQREAQRLRSANELLSREKGNLT 520
Cdd:COG4913 286 AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 521 HSLQVTQQQAKELRQELEKLQ----AAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEV 596
Cdd:COG4913 366 ALLAALGLPLPASAEEFAALRaeaaALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLAL 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 597 REAL--SCAILQRDV--------LQTEKAEVAEALTKAEAGRA--------QLELSLTKLRAEEASLRDSLSKMSALNES 658
Cdd:COG4913 446 RDALaeALGLDEAELpfvgelieVRPEEERWRGAIERVLGGFAltllvppeHYAAALRWVNRLHLRGRLVYERVRTGLPD 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 659 LAQDKLELNRLIAQLEEEKVALLG--RQQQAEHATTMAVEKQELLEQLRleQEVERQGL-QGSLCVAEQAREALEQQILV 735
Cdd:COG4913 526 PERPRLDPDSLAGKLDFKPHPFRAwlEAELGRRFDYVCVDSPEELRRHP--RAITRAGQvKGNGTRHEKDDRRRIRSRYV 603
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 736 LRSERshlQEQLAQLSRQLsgrdQELEQALRESQRQVEALERAAREKEAMAKERAGLAvKLAAAEREGRTLSEEAIRLRL 815
Cdd:COG4913 604 LGFDN---RAKLAALEAEL----AELEEELAEAEERLEALEAELDALQERREALQRLA-EYSWDEIDVASAEREIAELEA 675
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 816 EKEALESSLFDvqrqLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASL 895
Cdd:COG4913 676 ELERLDASSDD----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALL 751
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 896 REQRAAHEEDLQRlqhekEAAWRELQAERAQLQGQLQQEREELLARMEAEKEE 948
Cdd:COG4913 752 EERFAAALGDAVE-----RELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
531-1269 |
2.16e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 66.15 E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 531 KELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVL 610
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 611 QTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALN-ESLAQDKLELNRLIAQLEEEKVALLGRQQQAEH 689
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEeEELKSELLKLERRKVDDEEKLKESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 690 ATTMAVEKQELLEQLRLEQEVERQGLQGSlcvAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQ 769
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEE---EEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 770 RQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALL 849
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 850 LAKETLTGELAGLRQQVT-STEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQ 928
Cdd:pfam02463 486 LELLLSRQKLEERSQKESkARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 929 GQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSL------AAISLE 1002
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTEltklkeSAKAKE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1003 MERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRD 1082
Cdd:pfam02463 646 SGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLAD 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1083 GLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEG---AKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLA 1159
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKeeeKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRA 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1160 LLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLR 1239
Cdd:pfam02463 806 LEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLK 885
|
730 740 750
....*....|....*....|....*....|
gi 568931104 1240 QRLLKGESSLEALKQELQGSQRKLQEQEAE 1269
Cdd:pfam02463 886 DELESKEEKEKEEKKELEEESQKLNLLEEK 915
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
858-1634 |
2.88e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.93 E-value: 2.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 858 ELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERaqlqGQLQQEREE 937
Cdd:PTZ00121 1031 ELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAF----GKAEEAKKT 1106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 938 LLARMEAEKEELSKEIAALQQERDEGLLLAESEKQqalsLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQD 1017
Cdd:PTZ00121 1107 ETGKAEEARKAEEAKKKAEDARKAEEARKAEDARK----AEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAAR 1182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1018 RNTLNALTSELRdlraQLEEATAAHAQTVKELEERTGNLGRQREAcmREAEELRTQLRVLEDTRDGLRRELLEAQRKGRD 1097
Cdd:PTZ00121 1183 KAEEVRKAEELR----KAEDARKAEAARKAEEERKAEEARKAEDA--KKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRK 1256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1098 SQDSSEAHRQeaselRRSLSEGAKERealrRSNEELRSA--VKKAESERISLKLANEDKEQKLAllEEARvsvakEAGEL 1175
Cdd:PTZ00121 1257 FEEARMAHFA-----RRQAAIKAEEA----RKADELKKAeeKKKADEAKKAEEKKKADEAKKKA--EEAK-----KADEA 1320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1176 RASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSlEALKQE 1255
Cdd:PTZ00121 1321 KKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKA-DEAKKK 1399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1256 LQGSQRKLQE--QEAEFRARERGLLGSLEEARGAE---KRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEvel 1330
Cdd:PTZ00121 1400 AEEDKKKADElkKAAAAKKKADEAKKKAEEKKKADeakKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAK--- 1476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1331 ARVEAQRRVAEAQlgglrsalRRGLGLGRVSSSPAREAPAGGSGDGLSSPsplEYSPRSQPPSPGLIASPAPPDLDPEAV 1410
Cdd:PTZ00121 1477 KKAEEAKKADEAK--------KKAEEAKKKADEAKKAAEAKKKADEAKKA---EEAKKADEAKKAEEAKKADEAKKAEEK 1545
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1411 RDAlrdflQELRSAQRERdelKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEES 1490
Cdd:PTZ00121 1546 KKA-----DELKKAEELK---KAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEE 1617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1491 VR------RSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEA-KLESDKRRLKEVLDASESRSIKLELQRRA 1563
Cdd:PTZ00121 1618 AKikaeelKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAkKAEEDKKKAEEAKKAEEDEKKAAEALKKE 1697
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1564 LEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQltvERLSGALAKVEESEGNlrsKVQSL 1634
Cdd:PTZ00121 1698 AEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEE---DKKKAEEAKKDEEEKK---KIAHL 1762
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
445-988 |
3.13e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 65.93 E-value: 3.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 445 QVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQE----DAQREAQRLRSANELLSREKGNLT 520
Cdd:PTZ00121 1225 KAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEarkaDELKKAEEKKKADEAKKAEEKKKA 1304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 521 HSLQVTQQQAK---ELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRS-------GLT 590
Cdd:PTZ00121 1305 DEAKKKAEEAKkadEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEeakkkadAAK 1384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 591 KELVEVREALScaiLQRDVLQTEKAevAEALTKAEAGRAQLELSLTKL----RAEEASLRDSLSKMSALNESLAQDKLEL 666
Cdd:PTZ00121 1385 KKAEEKKKADE---AKKKAEEDKKK--ADELKKAAAAKKKADEAKKKAeekkKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 667 NRLIAQLEEEKVALLGRQQ-----QAEHATTMAVEKQELLEQLRLEQEVERQGLQgsLCVAEQAREALEQQilvlRSERS 741
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKaeeakKADEAKKKAEEAKKKADEAKKAAEAKKKADE--AKKAEEAKKADEAK----KAEEA 1533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 742 HLQEQLAQLSRQLSGRD-------------QELEQALRESQRQVEALERAAREKEAmakERAGLAVKLAAAEREGRTLSE 808
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADElkkaeelkkaeekKKAEEAKKAEEDKNMALRKAEEAKKA---EEARIEEVMKLYEEEKKMKAE 1610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 809 EAIRLRLEKEALES--SLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAAL------DKELM 880
Cdd:PTZ00121 1611 EAKKAEEAKIKAEElkKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEakkaeeDEKKA 1690
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 881 TQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQER 960
Cdd:PTZ00121 1691 AEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKA 1770
|
570 580
....*....|....*....|....*...
gi 568931104 961 DEGLLLAESEKQQALSLKESEKTALSEK 988
Cdd:PTZ00121 1771 EEIRKEKEAVIEEELDEEDEKRRMEVDK 1798
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
528-1128 |
4.93e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 64.94 E-value: 4.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 528 QQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSvQEGARARRELERSHRQLEQLEVKRsgltkelvevrealscAILQR 607
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLEPIRELA-ERYAAARERLAELEYLRAALRLWF----------------AQRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 608 DVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDslskmsALNESLAQDKLELNRLIAQLEEEKVALLGRQQQA 687
Cdd:COG4913 291 ELLEAELEELRAELARLEAELERLEARLDALREELDELEA------QIRGNGGDRLEQLEREIERLERELEERERRRARL 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 688 ehattmavekQELLEQLRLEQEVERQGLqgslcvaEQAREALEQQILVLRSERSHLQEQLAQLSRQLsgrdQELEQALRE 767
Cdd:COG4913 365 ----------EALLAALGLPLPASAEEF-------AALRAEAAALLEALEEELEALEEALAEAEAAL----RDLRRELRE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 768 SQRQVEALE-RAAREKEAMAKERAGLAVKLAAAEREGRTLSEEaIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQ 846
Cdd:COG4913 424 LEAEIASLErRKSNIPARLLALRDALAEALGLDEAELPFVGEL-IEVRPEEERWRGAIERVLGGFALTLLVPPEHYAAAL 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 847 AlLLAKETLTGELAGLR-QQVTSTEEKAALDKELMTQKLVQAEREAQASLRE---QRAAHE--EDLQRLQHEKEAAWREL 920
Cdd:COG4913 503 R-WVNRLHLRGRLVYERvRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAelgRRFDYVcvDSPEELRRHPRAITRAG 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 921 Q----AERAQLQGQ--------LQQEREELLARMEAEKEELSKEIAALQQERDeglllaesEKQQALSLKESEKTALSEK 988
Cdd:COG4913 582 QvkgnGTRHEKDDRrrirsryvLGFDNRAKLAALEAELAELEEELAEAEERLE--------ALEAELDALQERREALQRL 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 989 LMGTRHSLAAISLEMERQkrdaqsRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGR---QREACMR 1065
Cdd:COG4913 654 AEYSWDEIDVASAEREIA------ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRlekELEQAEE 727
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568931104 1066 EAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSL-SEGAKEREALRR 1128
Cdd:COG4913 728 ELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALrARLNRAEEELER 791
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1408-1884 |
1.97e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 63.01 E-value: 1.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1408 EAVRDALRDFLqelrsAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSAD-RRLSGAQAELAL 1486
Cdd:COG4913 275 EYLRAALRLWF-----AQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLEREIER 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1487 QEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVskmKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEG 1566
Cdd:COG4913 350 LERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA---AALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1567 ELQRSRLGLGDREAHAQALQDRvdsLQRQVADSEVKA------------------------GTLQLTV----ERLSGALA 1618
Cdd:COG4913 427 EIASLERRKSNIPARLLALRDA---LAEALGLDEAELpfvgelievrpeeerwrgaiervlGGFALTLlvppEHYAAALR 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1619 KVEESEGNLR---SKVQSLTDALTQSSASLSSTQDKnlhlqkaLSTCEHD-----RQVLQERLDAAR----QALSEARR- 1685
Cdd:COG4913 504 WVNRLHLRGRlvyERVRTGLPDPERPRLDPDSLAGK-------LDFKPHPfrawlEAELGRRFDYVCvdspEELRRHPRa 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1686 --------QSSSLGE-------------------QVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEgEAMALRSVQK 1738
Cdd:COG4913 577 itragqvkGNGTRHEkddrrrirsryvlgfdnraKLAALEAELAELEEELAEAEERLEALEAELDALQE-RREALQRLAE 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1739 LQEErrllQERLGSLQRALAQLEAEKRDLERSALQFDkdrvALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAEL 1818
Cdd:COG4913 656 YSWD----EIDVASAEREIAELEAELERLDASSDDLA----ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEE 727
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1819 DLAEAQQQIQHLEAQVDVALEGNHNPVQPEAGEQQLE------LQQEVERLRSAQVQTERTLEARERAHRQR 1884
Cdd:COG4913 728 ELDELQDRLEAAEDLARLELRALLEERFAAALGDAVErelrenLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
471-931 |
2.50e-09 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 62.67 E-value: 2.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 471 EGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVT---QQQAKELRQELEKLQAAQEEL 547
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAAsdhLNLVQTALRQQEKIERYQADL 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 548 KRQHNQLEDAQEDSvqegARARRELERSHRQLEQLEVKRSGLTKELVEVREALscailqrDVLQTEKAEVAEALTKAEAG 627
Cdd:PRK04863 358 EELEERLEEQNEVV----EEADEQQEENEARAEAAEEEVDELKSQLADYQQAL-------DVQQTRAIQYQQAVQALERA 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 628 RAQLELSltklraeeaslrdslskmsalneSLAQDKLE--LNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLR 705
Cdd:PRK04863 427 KQLCGLP-----------------------DLTADNAEdwLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLVR 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 706 -LEQEVERQGLQgslcvaEQAREALEQqilvLRSERsHLQEQLAQLSRQLSgrdqELEQALRESQRQVEALERAAREKEA 784
Cdd:PRK04863 484 kIAGEVSRSEAW------DVARELLRR----LREQR-HLAEQLQQLRMRLS----ELEQRLRQQQRAERLLAEFCKRLGK 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 785 MAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEalesslfDVQRQLAQLEARREQLEADSQALLLAKETltgeLAGLRQ 864
Cdd:PRK04863 549 NLDDEDELEQLQEELEARLESLSESVSEARERRM-------ALRQQLEQLQARIQRLAARAPAWLAAQDA----LARLRE 617
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 865 QVTSTEEKAALDKELMTQKLVQaEREAQAS---LREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQL 931
Cdd:PRK04863 618 QSGEEFEDSQDVTEYMQQLLER-ERELTVErdeLAARKQALDEEIERLSQPGGSEDPRLNALAERFGGVL 686
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1104-1633 |
3.13e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.24 E-value: 3.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1104 AHRQEASELRRSLSEGAKEREAL---RRSNEELRSAVKKAES-ERISLKLANEDKEQKLALLEEARVSVAKEAGELRASL 1179
Cdd:COG4913 232 EHFDDLERAHEALEDAREQIELLepiRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1180 QEVERSRLEARRELQELRRQMKTLDSDN-GRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQG 1258
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNGGDRlEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1259 SQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELR-------LEAVRAETSElGLRLSAAEGRAQGLEVELA 1331
Cdd:COG4913 392 LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRksniparLLALRDALAE-ALGLDEAELPFVGELIEVR 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1332 RVEAQ-RRVAEAQLGGLRSAL-------------------RRGLGLGRVSSSPAREAPAGGSGDGLS-----SPSPLEYS 1386
Cdd:COG4913 471 PEEERwRGAIERVLGGFALTLlvppehyaaalrwvnrlhlRGRLVYERVRTGLPDPERPRLDPDSLAgkldfKPHPFRAW 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1387 PRSQPPSPGLIASPAppdlDPEAVRDALRDFLQE-LRSAQRERDELKVQTSTLSQQLVEMEAERdhaasRAKQLQKAVAE 1465
Cdd:COG4913 551 LEAELGRRFDYVCVD----SPEELRRHPRAITRAgQVKGNGTRHEKDDRRRIRSRYVLGFDNRA-----KLAALEAELAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1466 SEEAWRSADRRLSGAQAELALQEESVRRSKR--ECRATLDQMAVLERSLQATESE---LRASQEKVSKMKATEAKLESDK 1540
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRlaEYSWDEIDVASAEREIAELEAElerLDASSDDLAALEEQLEELEAEL 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1541 RRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHA-QALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAK 1619
Cdd:COG4913 702 EELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLArLELRALLEERFAAALGDAVERELRENLEERIDALRAR 781
|
570
....*....|....
gi 568931104 1620 VEESEGNLRSKVQS 1633
Cdd:COG4913 782 LNRAEEELERAMRA 795
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
449-1191 |
3.14e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 62.30 E-value: 3.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 449 MRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQ 528
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 529 QAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELER-SHRQLEQLEVKRSGLTKELVEVREALSCAILQR 607
Cdd:pfam02463 336 EIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLeSERLSSAAKLKEEELELKSEEEKEAQLLLELAR 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 608 DVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQA 687
Cdd:pfam02463 416 QLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKL 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 688 EHATTMAVEKQELLEQLRLEQ------------------EVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQ 749
Cdd:pfam02463 496 EERSQKESKARSGLKVLLALIkdgvggriisahgrlgdlGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPL 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 750 LSRQLSGRDqELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQR 829
Cdd:pfam02463 576 GARKLRLLI-PKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSL 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 830 QLAQLEARR-------EQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAH 902
Cdd:pfam02463 655 EEGLAEKSEvkaslseLTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKI 734
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEK 982
Cdd:pfam02463 735 NEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA 814
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 983 TALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREA 1062
Cdd:pfam02463 815 ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEK 894
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1063 CMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAES 1142
Cdd:pfam02463 895 EKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGK 974
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1143 ERISLKLANEDKEQ-------KLALLEEARVSVAKEAGELRASLQEVERSRLEARR 1191
Cdd:pfam02463 975 VNLMAIEEFEEKEErynkdelEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSIN 1030
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
591-1201 |
4.66e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.62 E-value: 4.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 591 KELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLI 670
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 671 AQLEEEKVALLGRQQQAEhattmavEKQELLEQLRlEQEVERQGLQGSlcvaeqarealEQQILVLRSERSHLQEQLAQL 750
Cdd:PRK03918 252 GSKRKLEEKIRELEERIE-------ELKKEIEELE-EKVKELKELKEK-----------AEEYIKLSEFYEEYLDELREI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 751 SRQLSgrdqELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLsEEAIRLRLEKEALESSLFDVQrq 830
Cdd:PRK03918 313 EKRLS----RLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELY-EEAKAKKEELERLKKRLTGLT-- 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 831 laqlearREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAAlDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQ 910
Cdd:PRK03918 386 -------PEKLEKELEELEKAKEEIEEEISKITARIGELKKEIK-ELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEY 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 911 HEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELS-KEIAALQQERDEGLLLAESEKqqaLSLKESEKTALSEKL 989
Cdd:PRK03918 458 TAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKlKELAEQLKELEEKLKKYNLEE---LEKKAEEYEKLKEKL 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 990 MGTRHSLAAISLEMERQKrDAQSRQEQDRNTLNALTSELRDLRAQLEEATaahAQTVKELEERTGNLgrqrEACMREAEE 1069
Cdd:PRK03918 535 IKLKGEIKSLKKELEKLE-ELKKKLAELEKKLDELEEELAELLKELEELG---FESVEELEERLKEL----EPFYNEYLE 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1070 LR---TQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEgaKEREALRRSNEELRSAVKKAESEris 1146
Cdd:PRK03918 607 LKdaeKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAE--- 681
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1147 lklanedkeqkLALLEEARVSVAKEAGELRASLQEVERSRLE------ARRELQELRRQMK 1201
Cdd:PRK03918 682 -----------LEELEKRREEIKKTLEKLKEELEEREKAKKEleklekALERVEELREKVK 731
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
675-1266 |
4.72e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 61.52 E-value: 4.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 675 EEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQL 754
Cdd:TIGR00618 163 KEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 755 SGRDQELEQALRESQRQVEALERAAREKEAMAKERAglavklAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQL 834
Cdd:TIGR00618 243 AYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAV------LEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 835 EARREQLEadsqalllakETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRL---QH 911
Cdd:TIGR00618 317 QSKMRSRA----------KLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIhtlQQ 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 912 EKEAAWRELQAErAQLQGQLQQEREELLARMEAEKEELSKEIAA-----LQQERDEGLLLAESEKQQALSLKESEKTALS 986
Cdd:TIGR00618 387 QKTTLTQKLQSL-CKELDILQREQATIDTRTSAFRDLQGQLAHAkkqqeLQQRYAELCAAAITCTAQCEKLEKIHLQESA 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 987 EKLMGTRHSLA---AISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQT--VKELEERTGNLGRQRE 1061
Cdd:TIGR00618 466 QSLKEREQQLQtkeQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTrrMQRGEQTYAQLETSEE 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1062 ACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALR-RSNEELRSAVKKA 1140
Cdd:TIGR00618 546 DVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLAcEQHALLRKLQPEQ 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1141 ESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGR 1220
Cdd:TIGR00618 626 DLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTL 705
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 568931104 1221 LALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQ 1266
Cdd:TIGR00618 706 LRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQ 751
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
457-1352 |
4.88e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 61.73 E-value: 4.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 457 QELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQE 536
Cdd:pfam01576 18 KERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQLQNE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 537 LEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKE--------------LVEVREALSC 602
Cdd:pfam01576 98 KKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKErklleeriseftsnLAEEEEKAKS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 603 AILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNEslaqdklELNRLIAQLEEEKVALLG 682
Cdd:pfam01576 178 LSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIA-------ELRAQLAKKEEELQAALA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 683 RQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSE--------------RSHLQEQLA 748
Cdd:pfam01576 251 RLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTEledtldttaaqqelRSKREQEVT 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 749 QLSRQLSGRDQELEQALRESQRQ--------VEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEAL 820
Cdd:pfam01576 331 ELKKALEEETRSHEAQLQEMRQKhtqaleelTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKL 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 821 ESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQ-VTSTEEKAALDKELM-TQKLVQAEREAQASLREQ 898
Cdd:pfam01576 411 EGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKnIKLSKDVSSLESQLQdTQELLQEETRQKLNLSTR 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 899 RAAHEED---LQRLQHEKEAAWRELQAERAQLQGQL------------------------QQEREELLARME---AEKEE 948
Cdd:pfam01576 491 LRQLEDErnsLQEQLEEEEEAKRNVERQLSTLQAQLsdmkkkleedagtlealeegkkrlQRELEALTQQLEekaAAYDK 570
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 949 LSKEIAALQQERDEGLLLAESEKQQALSLKE---------SEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRN 1019
Cdd:pfam01576 571 LEKTKNRLQQELDDLLVDLDHQRQLVSNLEKkqkkfdqmlAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALE 650
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1020 TLNALTSELRDLRAQLEEATAAHAQTVKELEErtgnLGRQREACMREAEELRTQLRVLED----TRDGLRRELLEAQRKG 1095
Cdd:pfam01576 651 AKEELERTNKQLRAEMEDLVSSKDDVGKNVHE----LERSKRALEQQVEEMKTQLEELEDelqaTEDAKLRLEVNMQALK 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1096 RDSQDSSEAHRQEASELRRSLSEGAKEREALRrsnEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGEL 1175
Cdd:pfam01576 727 AQFERDLQARDEQGEEKRRQLVKQVRELEAEL---EDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKL 803
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1176 RASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQE 1255
Cdd:pfam01576 804 QAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDE 883
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1256 LQGSQRKLQEQEAEfrarergllgsLEEARGAEKRLLDSARSLELRLEAVRAEtselglrLSAAEGRAQGLEVELARVEA 1335
Cdd:pfam01576 884 KRRLEARIAQLEEE-----------LEEEQSNTELLNDRLRKSTLQVEQLTTE-------LAAERSTSQKSESARQQLER 945
|
970
....*....|....*..
gi 568931104 1336 QRRVAEAQLGGLRSALR 1352
Cdd:pfam01576 946 QNKELKAKLQEMEGTVK 962
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
572-962 |
5.50e-09 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 61.32 E-value: 5.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 572 LERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLS- 650
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQl 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 651 -----KMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQA 725
Cdd:COG4717 128 lplyqELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 726 REALEQQILVLRSERSHLQEQLAQLSRQLsgRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRT 805
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 806 LSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLV 885
Cdd:COG4717 286 LALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQL 365
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 886 QAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEA-EKEELSKEIAALQQERDE 962
Cdd:COG4717 366 EELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEAlDEEELEEELEELEEELEE 443
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
979-1341 |
7.87e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 7.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 979 ESEKTALSEKLMGTRHSLAAISLEMER---QKRDAQ----------SRQEQDRNTLNALTSELRDLRAQLEEAT---AAH 1042
Cdd:PRK02224 198 EKEEKDLHERLNGLESELAELDEEIERyeeQREQARetrdeadevlEEHEERREELETLEAEIEDLRETIAETErerEEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1043 AQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKE 1122
Cdd:PRK02224 278 AEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1123 REALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKT 1202
Cdd:PRK02224 358 AEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRT 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1203 LDsDNGRLGRELADLQGRLALGERTEKESRREALG-LRQRLLKGESSLEALKQELQGSQRKLQEQEaEFRARERGLLGSL 1281
Cdd:PRK02224 438 AR-ERVEEAEALLEAGKCPECGQPVEGSPHVETIEeDRERVEELEAELEDLEEEVEEVEERLERAE-DLVEAEDRIERLE 515
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1282 EEARGAEKRLLDSARSLE---LRLEAVRAETSElgLRLSAAEGRAQGLEVELARVEAQRRVAE 1341
Cdd:PRK02224 516 ERREDLEELIAERRETIEekrERAEELRERAAE--LEAEAEEKREAAAEAEEEAEEAREEVAE 576
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
442-1140 |
9.55e-09 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 60.74 E-value: 9.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 442 RQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQR-------------EAQRLRSA 508
Cdd:COG3096 352 YQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTraiqyqqavqaleKARALCGL 431
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 509 NELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARAR-----RELERSHRQLEQLE 583
Cdd:COG3096 432 PDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQawqtaRELLRRYRSQQALA 511
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 584 VKRSGLTKELVEVREALScailQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDK 663
Cdd:COG3096 512 QRLQQLRAQLAELEQRLR----QQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQL 587
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 664 LELNRLIAQLEEEKVALLGRQQQAEHATTMAVEK-----------QELLEQLRlEQEVERQGLQgslcvaeQAREALEQQ 732
Cdd:COG3096 588 EQLRARIKELAARAPAWLAAQDALERLREQSGEAladsqevtaamQQLLERER-EATVERDELA-------ARKQALESQ 659
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 733 ILVLRSERSHLQEQLAQLS-------------------------------------------RQLSGRD----------- 758
Cdd:COG3096 660 IERLSQPGGAEDPRLLALAerlggvllseiyddvtledapyfsalygparhaivvpdlsavkEQLAGLEdcpedlylieg 739
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 ------------QELEQA--LRESQRQ--------VEALERAAREK--EAMAKERAGLAVKLAAAEREGRTLSeeaiRLR 814
Cdd:COG3096 740 dpdsfddsvfdaEELEDAvvVKLSDRQwrysrfpeVPLFGRAAREKrlEELRAERDELAEQYAKASFDVQKLQ----RLH 815
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 815 LEKEAL-------------ESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTeekAALDKELMT 881
Cdd:COG3096 816 QAFSQFvgghlavafapdpEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQA---NLLADETLA 892
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 882 QKLVQAEREAQASLREQR--AAHEEDLQRLQhEKEAAWRELQAERAQLQGQLQQEREELlarmeaekEELSKEIAALQQE 959
Cdd:COG3096 893 DRLEELREELDAAQEAQAfiQQHGKALAQLE-PLVAVLQSDPEQFEQLQADYLQAKEQQ--------RRLKQQIFALSEV 963
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 960 RDEGLLLAESEKQQALslkeSEKTALSEKLmgtRHSLAaislEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEeat 1039
Cdd:COG3096 964 VQRRPHFSYEDAVGLL----GENSDLNEKL---RARLE----QAEEARREAREQLRQAQAQYSQYNQVLASLKSSRD--- 1029
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1040 aAHAQTVKELEERTGNLGRQREACMREA-------------------EELRTQLRVLEDTRDGLRRELLEAQRKGRDSQD 1100
Cdd:COG3096 1030 -AKQQTLQELEQELEELGVQADAEAEERarirrdelheelsqnrsrrSQLEKQLTRCEAEMDSLQKRLRKAERDYKQERE 1108
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 568931104 1101 SSEAHRQEASELRRSLSEGAKEREALRR-----SNEELRSAVKKA 1140
Cdd:COG3096 1109 QVVQAKAGWCAVLRLARDNDVERRLHRRelaylSADELRSMSDKA 1153
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
685-1332 |
1.13e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 60.62 E-value: 1.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 685 QQAEHATTMAVEKQEL------LEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVL---RSERSHL-QEQLAQLSRQL 754
Cdd:pfam12128 277 RQEERQETSAELNQLLrtlddqWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFldaDIETAAAdQEQLPSWQSEL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 755 SGRDQELEqALRESQRQVEAL--ERAAREKEAMAKERAGLAVKLAAaEREGRTLSEEAIRLRLEkeALESSLFDvQRQLA 832
Cdd:pfam12128 357 ENLEERLK-ALTGKHQDVTAKynRRRSKIKEQNNRDIAGIKDKLAK-IREARDRQLAVAEDDLQ--ALESELRE-QLEAG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 833 QLEARREQLEADSQAlllaketltGELAGLRQQVTSTEEKaaLDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHE 912
Cdd:pfam12128 432 KLEFNEEEYRLKSRL---------GELKLRLNQATATPEL--LLQLENFDERIERAREEQEAANAEVERLQSELRQARKR 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 913 KEAAWRELQAERA---QLQGQLQQEREELLARMEAEKEELSKEIAALQQerDEGLLLAesekqQALSLKESEKTALSEKL 989
Cdd:pfam12128 501 RDQASEALRQASRrleERQSALDELELQLFPQAGTLLHFLRKEAPDWEQ--SIGKVIS-----PELLHRTDLDPEVWDGS 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 990 MGTRHSLAAISLEMERQkrdaqsrqeqDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEE 1069
Cdd:pfam12128 574 VGGELNLYGVKLDLKRI----------DVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETF 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1070 LRTqlrVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLsegAKEREALRRSNEELRSAVKKAESErislkl 1149
Cdd:pfam12128 644 ART---ALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSL---EAQLKQLDKKHQAWLEEQKEQKRE------ 711
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1150 ANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRElqELRRQMKTLDSDN---GRLGRELADLQGRLALGER 1226
Cdd:pfam12128 712 ARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALET--WYKRDLASLGVDPdviAKLKREIRTLERKIERIAV 789
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1227 TEKESRR-------EALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLE 1299
Cdd:pfam12128 790 RRQEVLRyfdwyqeTWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEM 869
|
650 660 670
....*....|....*....|....*....|...
gi 568931104 1300 LRLEAVRAETSELGLRLSAAEGRAQGLEVELAR 1332
Cdd:pfam12128 870 SKLATLKEDANSEQAQGSIGERLAQLEDLKLKR 902
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1408-1901 |
2.21e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.28 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1408 EAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEawrsadrRLSGAQAELALQ 1487
Cdd:PRK02224 233 RETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE-------ERDDLLAEAGLD 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1488 EesvrrskrecratLDQMAVLERsLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGE 1567
Cdd:PRK02224 306 D-------------ADAEAVEAR-REELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1568 LQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSA---- 1643
Cdd:PRK02224 372 LEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAllea 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1644 -----------------SLSSTQDKNLHLQKALSTCEHDRQVLQERLDAArQALSEARRQSSSLGEQVQTLrGELASLEL 1706
Cdd:PRK02224 452 gkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDL-EELIAERR 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1707 QRGDAEGQLQQLQQALRQRQEGEAMALR-SVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDK--------- 1776
Cdd:PRK02224 530 ETIEEKRERAEELRERAAELEAEAEEKReAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAiadaedeie 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1777 ---DRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRtLTGAELDLAEAQQQIQHLEAQVDvALEGNHNPVQPEAGEQQ 1853
Cdd:PRK02224 610 rlrEKREALAELNDERRERLAEKRERKRELEAEFDEAR-IEEAREDKERAEEYLEQVEEKLD-ELREERDDLQAEIGAVE 687
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 568931104 1854 LELqQEVERLRSAQVQTERTLEARERAHRQrVSGLEEQVSTLKAQLHQ 1901
Cdd:PRK02224 688 NEL-EELEELRERREALENRVEALEALYDE-AEELESMYGDLRAELRQ 733
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
473-676 |
3.13e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 3.13e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 473 ERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHN 552
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 553 QLEDAQEDSVQEGARARR--------------ELERSHRQLEQLEVKRSGLTKELVEVREALScaiLQRDVLQTEKAEVA 618
Cdd:COG4942 101 AQKEELAELLRALYRLGRqpplalllspedflDAVRRLQYLKYLAPARREQAEELRADLAELA---ALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 619 EALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEE 676
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
453-1343 |
4.65e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.52 E-value: 4.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 453 YEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTaasaQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKE 532
Cdd:TIGR00606 212 LKQYKEKACEIRDQITSKEAQLESSREIVKSYENEL----DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 533 LRQELEKLQAAQEElkrqhnQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQt 612
Cdd:TIGR00606 288 LELKMEKVFQGTDE------QLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQ- 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 613 EKAEVAEALTKAEAGRAQL---------ELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRliAQLEEEKVALLGR 683
Cdd:TIGR00606 361 EHIRARDSLIQSLATRLELdgfergpfsERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQ--EQADEIRDEKKGL 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 684 QQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQ--------QILVLRSERSHLQEQLAQLSRQLS 755
Cdd:TIGR00606 439 GRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElskaeknsLTETLKKEVKSLQNEKADLDRKLR 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 756 GRDQELEQALRE--SQRQVEALERAAREKEAMAKE----RAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQR 829
Cdd:TIGR00606 519 KLDQEMEQLNHHttTRTQMEMLTKDKMDKDEQIRKiksrHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNK 598
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 830 QLAQLEARREQLEADSQALllaKETLTGELAGLRQQVTSTEEKAALDKelmTQKLVQAEREAQASLREQRAAHEEDLQRL 909
Cdd:TIGR00606 599 ELASLEQNKNHINNELESK---EEQLSSYEDKLFDVCGSQDEESDLER---LKEEIEKSSKQRAMLAGATAVYSQFITQL 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 910 QHEKEAAW----RELQAErAQLQgQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESeKQQALSLKESEKTAL 985
Cdd:TIGR00606 673 TDENQSCCpvcqRVFQTE-AELQ-EFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPG-RQSIIDLKEKEIPEL 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 986 SEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALT--SELRDLRAQLEEATAAHAQTVKELEERTGNLGRQreac 1063
Cdd:TIGR00606 750 RNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTdvTIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQ---- 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1064 mreaeELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASEL---RRSLSEGAKEREALRRSNEELRSAVKka 1140
Cdd:TIGR00606 826 -----QVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELkseKLQIGTNLQRRQQFEEQLVELSTEVQ-- 898
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1141 eseriSLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEverSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGR 1220
Cdd:TIGR00606 899 -----SLIREIKDAKEQDSPLETFLEKDQQEKEELISSKET---SNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDD 970
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1221 LALGERTEKESRREALG-LRQRLLKGESSLEALKQELQGS-QRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSL 1298
Cdd:TIGR00606 971 YLKQKETELNTVNAQLEeCEKHQEKINEDMRLMRQDIDTQkIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVL 1050
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 568931104 1299 ELRLE--AVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQ 1343
Cdd:TIGR00606 1051 QMKQEhqKLEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFR 1097
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
525-1202 |
6.35e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.72 E-value: 6.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 525 VTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARAR------RELERSHRQLEQLEVKR----SGLTKELV 594
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINnsnnkiKILEQQIKDLNDKLKKNkdkiNKLNSDLS 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 595 EVREALSCAILQRDVLQTEKAEVAEALTKAEAgraQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLE 674
Cdd:TIGR04523 107 KINSEIKNDKEQKNKLEVELNKLEKQKKENKK---NIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 675 E-EKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERqglqgslcvaeqareaLEQQILVLRSERSHLQEQLAQLSRQ 753
Cdd:TIGR04523 184 NiQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISE----------------LKKQNNQLKDNIEKKQQEINEKTTE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 754 LSGRDQELEQALRESQRQVEALERAAREKEAMAKeraglavKLAAAEREGRTLSEEAIRLRLEKEA-----LESSLFDVQ 828
Cdd:TIGR04523 248 ISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNK-------KIKELEKQLNQLKSEISDLNNQKEQdwnkeLKSELKNQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 829 RQLAQLEArreQLEADSQALllakETLTGELAGLRQQVT-STEEKAALDKELmTQKLVQAEreaqaSLREQRAAHEEDLQ 907
Cdd:TIGR04523 321 KKLEEIQN---QISQNNKII----SQLNEQISQLKKELTnSESENSEKQREL-EEKQNEIE-----KLKKENQSYKQEIK 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 908 RLQHEKEAAWRELQAeraqlQGQLQQEREELLARMEAEKEELSKEIAALQQERdeglllaESEKQQALSLKE--SEKTAL 985
Cdd:TIGR04523 388 NLESQINDLESKIQN-----QEKLNQQKDEQIKKLQQEKELLEKEIERLKETI-------IKNNSEIKDLTNqdSVKELI 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 986 SEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQleeataahaqtVKELEERTGNLGRQREACMR 1065
Cdd:TIGR04523 456 IKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEE-----------KKELEEKVKDLTKKISSLKE 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1066 EAEELRTQLRVLEDTRDGLRRELLEaqrkgRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERI 1145
Cdd:TIGR04523 525 KIEKLESEKKEKESKISDLEDELNK-----DDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKK 599
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1146 SLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKT 1202
Cdd:TIGR04523 600 DLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
519-758 |
7.26e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.70 E-value: 7.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 519 LTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVRE 598
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 599 ALscAILQRDvLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKV 678
Cdd:COG4942 91 EI--AELRAE-LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 679 ALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRD 758
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1040-1800 |
8.21e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 8.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1040 AAHAQTVKELEERTGNLGRQREACMREAEELR--TQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEasELRRSls 1117
Cdd:PTZ00121 1103 AKKTETGKAEEARKAEEAKKKAEDARKAEEARkaEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAE--DAKKA-- 1178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1118 EGAKEREALRRSnEELRSA--VKKAESERislKLANEDKEQKLALLEEARvsvakeagelraSLQEVERSRlEARRELQE 1195
Cdd:PTZ00121 1179 EAARKAEEVRKA-EELRKAedARKAEAAR---KAEEERKAEEARKAEDAK------------KAEAVKKAE-EAKKDAEE 1241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1196 LRRQMKTLDSDNGRLGREladlqGRLALGERTEKESRREALGLRQRLLKGESSLEAlkQELQGSQRKLQEQEAEFRARER 1275
Cdd:PTZ00121 1242 AKKAEEERNNEEIRKFEE-----ARMAHFARRQAAIKAEEARKADELKKAEEKKKA--DEAKKAEEKKKADEAKKKAEEA 1314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1276 G----LLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGleVELARVEAQRRVAEAQlgglrsal 1351
Cdd:PTZ00121 1315 KkadeAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA--AEKKKEEAKKKADAAK-------- 1384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1352 rrglglgrvssspaREAPAGGSGDGLSSPSPlEYSPRSQPPSPGLIASPAPPDLDPEAVRDALRDFLQELRSAQRERDEL 1431
Cdd:PTZ00121 1385 --------------KKAEEKKKADEAKKKAE-EDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1432 KVQTStlSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRrlsgaqAELALQEESVRRSKRECRATLDQMAVLERS 1511
Cdd:PTZ00121 1450 KKKAE--EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK------AEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1512 LQAteSELRASQEKvskMKATEAKLESDKRRLKEVLDASESRsiKLELQRRALEGELQRSRLGLGDREAHaqalqdrvds 1591
Cdd:PTZ00121 1522 KKA--DEAKKAEEA---KKADEAKKAEEKKKADELKKAEELK--KAEEKKKAEEAKKAEEDKNMALRKAE---------- 1584
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1592 LQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQE 1671
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAA 1664
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1672 RLdaARQALSEARRQSsslgeqvqtlrgELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLG 1751
Cdd:PTZ00121 1665 EE--AKKAEEDKKKAE------------EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKI 1730
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 568931104 1752 SLQRALAQLEAEKRDLERSAL-QFDKDRVALRKTLDKVEREKLRSHEDTL 1800
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKdEEEKKKIAHLKKEEEKKAEEIRKEKEAV 1780
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1004-1222 |
9.36e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 9.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1004 ERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDG 1083
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1084 LRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEE 1163
Cdd:COG4942 106 LAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEE 185
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1164 ARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLA 1222
Cdd:COG4942 186 ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
509-981 |
9.39e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 57.34 E-value: 9.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 509 NELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEdsvqegaRARRELERSHRQLEQLEVKRSG 588
Cdd:TIGR04523 213 NKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQN-------KIKKQLSEKQKELEQNNKKIKE 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 589 LTKELVEVREALScaILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNR 668
Cdd:TIGR04523 286 LEKQLNQLKSEIS--DLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQR 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 669 LIAQlEEEKVALLGRQQQAEHATTMAVEKQ-ELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQL 747
Cdd:TIGR04523 364 ELEE-KQNEIEKLKKENQSYKQEIKNLESQiNDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEI 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 748 AQLSRQLSGRD---QELEQALRESQRQVEALERAAREKEAmakeraglavKLAAAEREGRTLSEEAIRLRLEKEALESSL 824
Cdd:TIGR04523 443 KDLTNQDSVKEliiKNLDNTRESLETQLKVLSRSINKIKQ----------NLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 825 FDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKElmTQKLVQAEREAQASLREQRAAhEE 904
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEK--NKEIEELKQTQKSLKKKQEEK-QE 589
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 905 DLQRLQHEKEAAWRELqAERAQLQGQLQQEREELlarmEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESE 981
Cdd:TIGR04523 590 LIDQKEKEKKDLIKEI-EEKEKKISSLEKELEKA----KKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKW 661
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1630-1908 |
1.10e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 57.25 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1630 KVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQ-ERLDAARQ----ALSEARRQSSSLGEQVQTLRGELASL 1704
Cdd:COG1196 214 RYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAElEELEAELAeleaELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1705 ELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRVALRKT 1784
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1785 LDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNHNPVQPEAGEQQLELQQEVERLR 1864
Cdd:COG1196 374 LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 568931104 1865 SAqvQTERTLEARERAHRQRVSGLEEQVSTLKAQLHQELRRSSA 1908
Cdd:COG1196 454 LE--EEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLL 495
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
733-991 |
1.10e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 56.31 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 733 ILVLRSERSHLQEQLAQLSRQLSGRDQELEQALREsqrqveaLERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAir 812
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQEIAELEKE-------LAALKKEEKALLKQLAALERRIAALARRIRALEQEL-- 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 813 lrlekEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLtGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQ 892
Cdd:COG4942 79 -----AALEAELAELEKEIAELRAELEAQKEELAELLRALYRL-GRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 893 ASLREQRA---AHEEDLQRLQHEKEAAWRELQAERAQLQgQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAES 969
Cdd:COG4942 153 EELRADLAelaALRAELEAERAELEALLAELEEERAALE-ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
250 260
....*....|....*....|..
gi 568931104 970 EKQQALSLKESEKTALSEKLMG 991
Cdd:COG4942 232 LEAEAAAAAERTPAAGFAALKG 253
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
463-1078 |
1.48e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.90 E-value: 1.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 463 VRKQLSDSEGERRGLEEQLQRLRDqtaasaqaqeDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQA 542
Cdd:TIGR00618 185 EFAKKKSLHGKAELLTLRSQLLTL----------CTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 543 AQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALT 622
Cdd:TIGR00618 255 QLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHV 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 623 KAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRlIAQLEEEKVALLGRQQQAEHATTMAVEKQELLE 702
Cdd:TIGR00618 335 KQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQH-IHTLQQQKTTLTQKLQSLCKELDILQREQATID 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 703 QLRLEQEVERQGL-------QGSLCVAEQAREALEQQILVLRSERSHLQE---QLAQLSRQLSGRDQELEQALRESQRQV 772
Cdd:TIGR00618 414 TRTSAFRDLQGQLahakkqqELQQRYAELCAAAITCTAQCEKLEKIHLQEsaqSLKEREQQLQTKEQIHLQETRKKAVVL 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 773 EALERAAREKEAMAKERAGLAVKLAAAEREGRT------LSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQ 846
Cdd:TIGR00618 494 ARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLtrrmqrGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFS 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 847 ALLLAKETLTGELAGLRQQVTsteekaaldkelMTQKLVQAEREAQASLREQRAAHEEDLQRLQH--EKEAAWRELQAER 924
Cdd:TIGR00618 574 ILTQCDNRSKEDIPNLQNITV------------RLQDLTEKLSEAEDMLACEQHALLRKLQPEQDlqDVRLHLQQCSQEL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 925 AQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEME 1004
Cdd:TIGR00618 642 ALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFN 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1005 RQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHA--------------QTVKELEERTGNLGRQReacmREAEEL 1070
Cdd:TIGR00618 722 EIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTeahfnnneevtaalQTGAELSHLAAEIQFFN----RLREED 797
|
....*...
gi 568931104 1071 RTQLRVLE 1078
Cdd:TIGR00618 798 THLLKTLE 805
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
430-982 |
2.15e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 2.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 430 STLTLIHSALHKRQLQVQDMRGRYEASQEL--LGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRS 507
Cdd:TIGR00618 318 SKMRSRAKLLMKRAAHVKQQSSIEEQRRLLqtLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQS 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 508 ANELLSREKgNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRS 587
Cdd:TIGR00618 398 LCKELDILQ-REQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQ 476
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 588 GLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSltklraeeaslRDSLSKMSALNESLAQDKLELN 667
Cdd:TIGR00618 477 TKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNP-----------GPLTRRMQRGEQTYAQLETSEE 545
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 668 RLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQL 747
Cdd:TIGR00618 546 DVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQ 625
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 748 AQLSRQLSGRDQELEQALRESQRQVEALERAA-REKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFD 826
Cdd:TIGR00618 626 DLQDVRLHLQQCSQELALKLTALHALQLTLTQeRVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTL 705
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 827 VQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAalDKELMTQKLVQAEREAQASLREQRAAHEEDL 906
Cdd:TIGR00618 706 LRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQA--RTVLKARTEAHFNNNEEVTAALQTGAELSHL 783
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 907 QRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEK 982
Cdd:TIGR00618 784 AAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSK 859
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
895-1353 |
2.43e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.08 E-value: 2.43e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 895 LREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDE---------GLL 965
Cdd:COG4913 260 LAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDEleaqirgngGDR 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 966 LAESEKQqaLSLKESEKTALSEKLMGTRHSLAAISL-------EMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEA 1038
Cdd:COG4913 340 LEQLERE--IERLERELEERERRRARLEALLAALGLplpasaeEFAALRAEAAALLEALEEELEALEEALAEAEAALRDL 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1039 TAAHAQTVKELEErtgnLGRQREACMREAEELRTQL-RVLEDTRDGLR--RELLEAQRKGRDSQDSSE------------ 1103
Cdd:COG4913 418 RRELRELEAEIAS----LERRKSNIPARLLALRDALaEALGLDEAELPfvGELIEVRPEEERWRGAIErvlggfaltllv 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1104 --AHRQEASELRRSLSEGAK---EREALRRSNEELRSAVKKAESERISLK--------------------------LANE 1152
Cdd:COG4913 494 ppEHYAAALRWVNRLHLRGRlvyERVRTGLPDPERPRLDPDSLAGKLDFKphpfrawleaelgrrfdyvcvdspeeLRRH 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1153 DK---------------------------------EQKLALLEEARVSVAKEAGELRASLQEV--ERSRLEARRELQELR 1197
Cdd:COG4913 574 PRaitragqvkgngtrhekddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALeaELDALQERREALQRL 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1198 RQMKTLDSDNGRLGRELADLQGRLAlgertekesrrealglrqRLLKGESSLEALKQELQGSQRKLQEQEAEFRAReRGL 1277
Cdd:COG4913 654 AEYSWDEIDVASAEREIAELEAELE------------------RLDASSDDLAALEEQLEELEAELEELEEELDEL-KGE 714
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 1278 LGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGL--RLSAAEGRAQGLEVElARVEAQRRVAEAQLGGLRSALRR 1353
Cdd:COG4913 715 IGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLeeRFAAALGDAVERELR-ENLEERIDALRARLNRAEEELER 791
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
759-1194 |
2.82e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 2.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLS--EEAIRLRLEKEALESSLFDVQRQLAQLEA 836
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEklLQLLPLYQELEALEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 837 R---REQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEK 913
Cdd:COG4717 154 RleeLRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 914 EAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKE---------------IAALQQERDEGLLLAESEKQQALSLK 978
Cdd:COG4717 234 NELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLIltiagvlflvlgllaLLFLLLAREKASLGKEAEELQALPAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 979 ESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERtgnlgR 1058
Cdd:COG4717 314 EELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEEL-----R 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1059 QREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGrdsqdSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVK 1138
Cdd:COG4717 389 AALEQAEEYQELKEELEELEEQLEELLGELEELLEAL-----DEEELEEELEELEEELEELEEELEELREELAELEAELE 463
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1139 KAESERislklANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQ 1194
Cdd:COG4717 464 QLEEDG-----ELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
473-1235 |
3.00e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 55.73 E-value: 3.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 473 ERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQEL---EKLQAAQEELKR 549
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALrqqEKIERYQEDLEE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 550 QHNQLEDAQEdsVQEGARARRELERSHRQLEQLEVKRsgLTKELVEVREALscailqrDVLQTEKAEVAEALTKAEAGRA 629
Cdd:COG3096 359 LTERLEEQEE--VVEEAAEQLAEAEARLEAAEEEVDS--LKSQLADYQQAL-------DVQQTRAIQYQQAVQALEKARA 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 630 QLELS----------LTKLRAEEASLRDSL----SKMSALNESLAQ--DKLELNRLIA------QLEEEKVALLGR---- 683
Cdd:COG3096 428 LCGLPdltpenaedyLAAFRAKEQQATEEVleleQKLSVADAARRQfeKAYELVCKIAgeversQAWQTARELLRRyrsq 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 684 QQQAEHATTMAVEKQELLEQLRLEQEVERQ--GLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQEL 761
Cdd:COG3096 508 QALAQRLQQLRAQLAELEQRLRQQQNAERLleEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQL 587
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 762 EQ--ALRESQRQVEALERAAREKEAMAKERAGLAVKLAAA---------EREgRTLSEEAIRLRLEKEALESSLfdvqRQ 830
Cdd:COG3096 588 EQlrARIKELAARAPAWLAAQDALERLREQSGEALADSQEvtaamqqllERE-REATVERDELAARKQALESQI----ER 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 831 LAQLEArreqleADSQALLLAKETLTGEL--------------------AGLRQQVTSTEEKAALDK----ELMTQKLVQ 886
Cdd:COG3096 663 LSQPGG------AEDPRLLALAERLGGVLlseiyddvtledapyfsalyGPARHAIVVPDLSAVKEQlaglEDCPEDLYL 736
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 887 AEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQlqQEREELLARMEAEKEELSKEIAALQQERDEGLLL 966
Cdd:COG3096 737 IEGDPDSFDDSVFDAEELEDAVVVKLSDRQWRYSRFPEVPLFGR--AAREKRLEELRAERDELAEQYAKASFDVQKLQRL 814
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 967 AESEKQ---QALSL-----KESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQdRNTLNALTSE----------- 1027
Cdd:COG3096 815 HQAFSQfvgGHLAVafapdPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQ-LQLLNKLLPQanlladetlad 893
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1028 -LRDLRAQLEEATAA------HAQTVKELEERTGNLGRQREacmrEAEELRTQLRVLEDTRDGLRRELLE----AQRKGR 1096
Cdd:COG3096 894 rLEELREELDAAQEAqafiqqHGKALAQLEPLVAVLQSDPE----QFEQLQADYLQAKEQQRRLKQQIFAlsevVQRRPH 969
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1097 DSQDSSEAHRQEASELRRSLSEGAKERE-ALRRSNEELRSAVKKAES---ERISLKLANEDKEQKLALLEEARvsvakEA 1172
Cdd:COG3096 970 FSYEDAVGLLGENSDLNEKLRARLEQAEeARREAREQLRQAQAQYSQynqVLASLKSSRDAKQQTLQELEQEL-----EE 1044
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1173 GELRASLQEVERSRLEARR---ELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREA 1235
Cdd:COG3096 1045 LGVQADAEAEERARIRRDElheELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQV 1110
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
523-1320 |
4.37e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.18 E-value: 4.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 523 LQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSC 602
Cdd:pfam01576 14 LQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESRLEEEEERSQQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 603 AILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKlelnrliaQLEEEKVALLG 682
Cdd:pfam01576 94 LQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKER--------KLLEERISEFT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 683 RQQQAEHattmavEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELE 762
Cdd:pfam01576 166 SNLAEEE------EKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 763 QALRESQRQVEALERAAREKEAMAKERAGLAVKLA------AAEREGRTLSEEAIR-LRLEKEALESSLFDVQRQLAQLE 835
Cdd:pfam01576 240 KKEEELQAALARLEEETAQKNNALKKIRELEAQISelqedlESERAARNKAEKQRRdLGEELEALKTELEDTLDTTAAQQ 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 836 ARREQLEADSQALllaKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEReAQASLREQRAAHEEDLQRLQHEK-- 913
Cdd:pfam01576 320 ELRSKREQEVTEL---KKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKR-NKANLEKAKQALESENAELQAELrt 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 914 -EAAWRELQAERAQLQGQLQ-------------QEREELLARMEAEKE--------------ELSKEIAALQQERDEGLL 965
Cdd:pfam01576 396 lQQAKQDSEHKRKKLEGQLQelqarlseserqrAELAEKLSKLQSELEsvssllneaegkniKLSKDVSSLESQLQDTQE 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 966 LAESEKQQALSLK------ESEKTALSEKL---MGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNA-------LTSELR 1029
Cdd:pfam01576 476 LLQEETRQKLNLStrlrqlEDERNSLQEQLeeeEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAleegkkrLQRELE 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1030 DLRAQLEEATAAHAQTVK-------ELEERTGNLGRQREACmreaeelrTQLRVLEDTRDGLRRELLEAQRKGRDSQDSS 1102
Cdd:pfam01576 556 ALTQQLEEKAAAYDKLEKtknrlqqELDDLLVDLDHQRQLV--------SNLEKKQKKFDQMLAEEKAISARYAEERDRA 627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1103 EAHRQE----ASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRAS 1178
Cdd:pfam01576 628 EAEAREketrALSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDE 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1179 LQEVERSRLEARRELQELR----RQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQ 1254
Cdd:pfam01576 708 LQATEDAKLRLEVNMQALKaqfeRDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQID 787
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1255 ELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAE 1320
Cdd:pfam01576 788 AANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASE 853
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
906-1210 |
4.50e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 55.13 E-value: 4.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 906 LQRLQHEKEAAWRELQAERAQL-QGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTA 984
Cdd:pfam17380 275 LHIVQHQKAVSERQQQEKFEKMeQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIR 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 985 LSE-KLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTlnaltselRDLRAQLEEATAAHAQTvKELEERTGNLGRQREAC 1063
Cdd:pfam17380 355 QEErKRELERIRQEEIAMEISRMRELERLQMERQQKN--------ERVRQELEAARKVKILE-EERQRKIQQQKVEMEQI 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1064 MREAEELRT-QLRVLEDTRDglrRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAES 1142
Cdd:pfam17380 426 RAEQEEARQrEVRRLEEERA---REMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELE 502
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1143 ERISLKLANEDKEQKLAL-LEEARVSVAKEAGELRASLQEVERSRLEARRELQElrrQMKTLDSDNGRL 1210
Cdd:pfam17380 503 ERKQAMIEEERKRKLLEKeMEERQKAIYEEERRREAEEERRKQQEMEERRRIQE---QMRKATEERSRL 568
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
825-1355 |
5.52e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.92 E-value: 5.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 825 FDVQRQLAQLEARREQLEADSQALLLAKETLT--GELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAH 902
Cdd:COG4913 221 PDTFEAADALVEHFDDLERAHEALEDAREQIEllEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQHEKEaawrELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQAlslkesek 982
Cdd:COG4913 301 RAELARLEAELE----RLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALL-------- 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 983 TALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATaahaQTVKELEERTGNLGRqrea 1062
Cdd:COG4913 369 AALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE----AEIASLERRKSNIPA---- 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1063 cmrEAEELRTQL-RVLEDTRDGLR--RELLEAQRKGRDSQDSSE-AHRQEASELrrsLSEGAKEREALRRSNEELRSAVK 1138
Cdd:COG4913 441 ---RLLALRDALaEALGLDEAELPfvGELIEVRPEEERWRGAIErVLGGFALTL---LVPPEHYAAALRWVNRLHLRGRL 514
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1139 KAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASL-QEVERSRLEARRELQELRRQMkTLD---SDNGRLgREL 1214
Cdd:COG4913 515 VYERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELgRRFDYVCVDSPEELRRHPRAI-TRAgqvKGNGTR-HEK 592
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1215 AD---LQGRLALGERTE---KESRREALGLRQRLLKGESSLEALKQELQGSQRKLQ--EQEAEFRARERGLLGSLEEARG 1286
Cdd:COG4913 593 DDrrrIRSRYVLGFDNRaklAALEAELAELEEELAEAEERLEALEAELDALQERREalQRLAEYSWDEIDVASAEREIAE 672
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 1287 AEKRL--LDSA----RSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGL 1355
Cdd:COG4913 673 LEAELerLDASsddlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLEL 747
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
808-1207 |
6.56e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 6.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 808 EEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQA 887
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 888 EREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEgLLLA 967
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE-LEQL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 968 ESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQkrdaqsrqeqdRNTLNALTSELRDLRAQLEEATAAHAQTVK 1047
Cdd:COG4717 233 ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL-----------ILTIAGVLFLVLGLLALLFLLLAREKASLG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1048 ELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEA--SELRRSLSE-----GA 1120
Cdd:COG4717 302 KEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELqlEELEQEIAAllaeaGV 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1121 KEREALRRSNEELRSAVK-KAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQ 1199
Cdd:COG4717 382 EDEEELRAALEQAEEYQElKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAELEAE 461
|
....*...
gi 568931104 1200 MKTLDSDN 1207
Cdd:COG4717 462 LEQLEEDG 469
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1188-1777 |
8.20e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.54 E-value: 8.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1188 EARRELQELRRQMKTLdsdngrlgRELADLQGRLAlgERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQE 1267
Cdd:COG4913 239 RAHEALEDAREQIELL--------EPIRELAERYA--AARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1268 AEFRARERGLLGSLEEARGAEKRLLDSARSlelRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGL 1347
Cdd:COG4913 309 AELERLEARLDALREELDELEAQIRGNGGD---RLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1348 RSALRRGLGLGRVSSSPAREAPAggsgdglsspspleysprsqppspgliaspappdldpeAVRDALRDFLQELRSAQRE 1427
Cdd:COG4913 386 RAEAAALLEALEEELEALEEALA--------------------------------------EAEAALRDLRRELRELEAE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1428 RDELKVQTSTLSQQLVEMEAE-RDHAASRAKQLQKA-----VAESEEAWRSADRRLSGAQAELALQEEsvrrskrecrat 1501
Cdd:COG4913 428 IASLERRKSNIPARLLALRDAlAEALGLDEAELPFVgelieVRPEEERWRGAIERVLGGFALTLLVPP------------ 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1502 lDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASES---RSIKLELQRRAL------EGELQRSR 1572
Cdd:COG4913 496 -EHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHpfrAWLEAELGRRFDyvcvdsPEELRRHP 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1573 LGL-------GDREAHAQALQDRVDSL-------QRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDAL 1638
Cdd:COG4913 575 RAItragqvkGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLA 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1639 TQSSASL--SSTQDKNLHLQKALSTCE---HDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEG 1713
Cdd:COG4913 655 EYSWDEIdvASAEREIAELEAELERLDassDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQD 734
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 1714 QLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERL-GSLQRALAQLEAEKRDLERSALQFDKD 1777
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGDAVERELRENLeERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
453-1011 |
1.46e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.57 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 453 YEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSRekgnlthSLQVTQQQAKE 532
Cdd:pfam05483 221 HEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDE-------NLKELIEKKDH 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 533 LRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELvevrEALSCAI---LQRDV 609
Cdd:pfam05483 294 LTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEF----EATTCSLeelLRTEQ 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 610 LQTEKAEVAEALTKAEAGRAQLELS-LTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQL---EEEKVALLGRQQ 685
Cdd:pfam05483 370 QRLEKNEDQLKIITMELQKKSSELEeMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELkgkEQELIFLLQARE 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 686 QAEH-----ATTMAVEKQELLEQLR-LEQEVERQGLQGSLCVAEQAREALEQQILVlrSERSHLQEQLAQLSRQLSGRDQ 759
Cdd:pfam05483 450 KEIHdleiqLTAIKTSEEHYLKEVEdLKTELEKEKLKNIELTAHCDKLLLENKELT--QEASDMTLELKKHQEDIINCKK 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 760 ELEQALRESQRQVEALERAAREKEAMAKE----RAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLE 835
Cdd:pfam05483 528 QEERMLKQIENLEEKEMNLRDELESVREEfiqkGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKN 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 836 ARREQLEADSQALLLAKETLTGELAGLRQQVTSTEekaaLDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEA 915
Cdd:pfam05483 608 KNIEELHQENKALKKKGSAENKQLNAYEIKVNKLE----LELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAI 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 916 AWRELQAERaQLQGQLQQEREELLARMEAEKEELSKEIaalqQERDEGLLLAESEKQQALSLKESEKTALSE---KLMGT 992
Cdd:pfam05483 684 ADEAVKLQK-EIDKRCQHKIAEMVALMEKHKHQYDKII----EERDSELGLYKNKEQEQSSAKAALEIELSNikaELLSL 758
|
570
....*....|....*....
gi 568931104 993 RHSLAAISLEMERQKRDAQ 1011
Cdd:pfam05483 759 KKQLEIEKEEKEKLKMEAK 777
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
522-938 |
1.59e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 53.52 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 522 SLQVTQQQAKELRQELEKLQAAQ--------EELKRQHNQLEDAQE--DSVQEGARARRELERSHRQLEQlevKRSGLTK 591
Cdd:PRK10929 17 AYAATAPDEKQITQELEQAKAAKtpaqaeivEALQSALNWLEERKGslERAKQYQQVIDNFPKLSAELRQ---QLNNERD 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 592 ELVEVREALSCAILQRDVLQTeKAEVAEaltkaEAGRAQLElsltKLRAEEASlrDSLSKmsalnesLAQDKLELNRLIA 671
Cdd:PRK10929 94 EPRSVPPNMSTDALEQEILQV-SSQLLE-----KSRQAQQE----QDRAREIS--DSLSQ-------LPQQQTEARRQLN 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 672 QLEeekvallgRQQQAEHATTMAVEKQELLEqlrLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERshLQEQLAQLS 751
Cdd:PRK10929 155 EIE--------RRLQTLGTPNTPLAQAQLTA---LQAESAALKALVDELELAQLSANNRQELARLRSEL--AKKRSQQLD 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 752 RQLsgrdqeleQALRE---SQRQVEAlERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEairlrLEKEALESSLF-DV 827
Cdd:PRK10929 222 AYL--------QALRNqlnSQRQREA-ERALESTELLAEQSGDLPKSIVAQFKINRELSQA-----LNQQAQRMDLIaSQ 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 828 QRQLAQ--LEARREQLEADSQALLLAKETLTGElaGLRQQVTSTEEKAaldkelmtqKLVQAEREaQASLREQRAAHEED 905
Cdd:PRK10929 288 QRQAASqtLQVRQALNTLREQSQWLGVSNALGE--ALRAQVARLPEMP---------KPQQLDTE-MAQLRVQRLRYEDL 355
|
410 420 430
....*....|....*....|....*....|....*..
gi 568931104 906 LQRLQHE---KEAAWRELQAERAQ-LQGQLQQEREEL 938
Cdd:PRK10929 356 LNKQPQLrqiRQADGQPLTAEQNRiLDAQLRTQRELL 392
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
759-1569 |
1.70e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.20 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQALRESQRQVEALERAAREKEAMAKERA--------GLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQ 830
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKfylrqsviDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 831 LAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTeekaaldkelmtqkLVQAEREAQASLREQRAAHEEDLQRLQ 910
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSI--------------LVDFEEASGKKIYEHDSMSTMHFRSLG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 911 HEKEAAWRELQAERAQLQGQLQQEREELlarmEAEKEELSKEIAALQQERDEGLllaesekQQALSLKESEKTALSEKLM 990
Cdd:pfam15921 220 SAISKILRELDTEISYLKGRIFPVEDQL----EALKSESQNKIELLLQQHQDRI-------EQLISEHEVEITGLTEKAS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 991 GTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEER-------TGNLGRQREAC 1063
Cdd:pfam15921 289 SARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQlvlanseLTEARTERDQF 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1064 MREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVK-KAES 1142
Cdd:pfam15921 369 SQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQgQMER 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1143 ERISLKLANEDKEQKLAL---LEEARVSVAKEAGELRA---SLQEVERSRLEARRELQELRRQMKTLDSDNGRLgRELAD 1216
Cdd:pfam15921 449 QMAAIQGKNESLEKVSSLtaqLESTKEMLRKVVEELTAkkmTLESSERTVSDLTASLQEKERAIEATNAEITKL-RSRVD 527
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1217 LQGRLALGERTEKESRREAlglrqrllkgESSLEALKQELQGSQRKLQ--EQEAEFRARERGLLGSLEEARGAEKRLLDS 1294
Cdd:pfam15921 528 LKLQELQHLKNEGDHLRNV----------QTECEALKLQMAEKDKVIEilRQQIENMTQLVGQHGRTAGAMQVEKAQLEK 597
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1295 A---RSLELRLEAVRAETSELGLRlsAAEGRAQGLEVE---LARVEAQRRVAEAQLGGLRSALRRGLGLGRVSSSPAREa 1368
Cdd:pfam15921 598 EindRRLELQEFKILKDKKDAKIR--ELEARVSDLELEkvkLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSE- 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1369 paggsgdglsspspleysprsqppspgliaspappdlDPEAVRDALRDFLQELR-SAQRERDELKVQTSTLSQ---QLVE 1444
Cdd:pfam15921 675 -------------------------------------DYEVLKRNFRNKSEEMEtTTNKLKMQLKSAQSELEQtrnTLKS 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1445 MEAERDHAASRAKQLQKAVAESE---EAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVlERSLQATESELRA 1521
Cdd:pfam15921 718 MEGSDGHAMKVAMGMQKQITAKRgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVAT-EKNKMAGELEVLR 796
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1522 SQEKVSKMKATEAKLESDKRRL-----KEVLDASESRSIKLELQRRALEGELQ 1569
Cdd:pfam15921 797 SQERRLKEKVANMEVALDKASLqfaecQDIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
853-1201 |
1.80e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 53.20 E-value: 1.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 853 ETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAawrelQAERAQLQGQLQ 932
Cdd:pfam17380 269 EFLNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDR-----QAAIYAEQERMA 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 933 QEREELLARMeaEKEELSKEIAALQQERdeglLLAESEKQQALSLKESEKTALSEKLmgtRHSLAAIS----LEMERQKR 1008
Cdd:pfam17380 344 MERERELERI--RQEERKRELERIRQEE----IAMEISRMRELERLQMERQQKNERV---RQELEAARkvkiLEEERQRK 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1009 DAQSRQEQDRntlnaltselrdLRAQLEEATAAHAQTVKelEERTGNLGRQREacmrEAEELRTQLRVLEDTRDGLRREL 1088
Cdd:pfam17380 415 IQQQKVEMEQ------------IRAEQEEARQREVRRLE--EERAREMERVRL----EEQERQQQVERLRQQEEERKRKK 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1089 LEAQRKGRDSQDSSEAHR----QEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERIslklANEDKEQKLALLEEA 1164
Cdd:pfam17380 477 LELEKEKRDRKRAEEQRRkileKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEERRRE----AEEERRKQQEMEERR 552
|
330 340 350
....*....|....*....|....*....|....*..
gi 568931104 1165 RVsvakeagELRASLQEVERSRLEARRELQELRRQMK 1201
Cdd:pfam17380 553 RI-------QEQMRKATEERSRLEAMEREREMMRQIV 582
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1406-1883 |
2.34e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 53.03 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1406 DPEAVRDALRDFLQELRSAQRERDELKvQTSTLSQQLVEMEAERDhaASRAKQLQKAVAESEEAWRSADRRLSGAQAELA 1485
Cdd:COG3096 233 DMEAALRENRMTLEAIRVTQSDRDLFK-HLITEATNYVAADYMRH--ANERRELSERALELRRELFGARRQLAEEQYRLV 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1486 lqeesvrrskrecrATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASEsrsiKLELQRRALE 1565
Cdd:COG3096 310 --------------EMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEKIERYQEDLEELTE----RLEEQEEVVE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1566 gELQRSRLglgDREAHAQALQDRVDSLQRQVAD-------SEVKAGTLQLTVERLSGA----------LAKVEESEGNLR 1628
Cdd:COG3096 372 -EAAEQLA---EAEARLEAAEEEVDSLKSQLADyqqaldvQQTRAIQYQQAVQALEKAralcglpdltPENAEDYLAAFR 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1629 SKVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEH--DRQVLQERLDAARQALSEARRQSSsLGEQVQTLRGELASLEl 1706
Cdd:COG3096 448 AKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKiaGEVERSQAWQTARELLRRYRSQQA-LAQRLQQLRAQLAELE- 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1707 qrgdaegqlqqlqqalrqrqegeamalRSVQKLQEERRLLQE---RLGS-------LQRALAQLEAEKRDLERSALQFDK 1776
Cdd:COG3096 526 ---------------------------QRLRQQQNAERLLEEfcqRIGQqldaaeeLEELLAELEAQLEELEEQAAEAVE 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1777 DRVALRKTLDKVEREKlrshedtlrlnaergrldRTLTGAELDLAEAQQQIQHLEAQVDVALEgnhnpvqpEAGEQQLEL 1856
Cdd:COG3096 579 QRSELRQQLEQLRARI------------------KELAARAPAWLAAQDALERLREQSGEALA--------DSQEVTAAM 632
|
490 500
....*....|....*....|....*..
gi 568931104 1857 QQEVERLRSAQVQTERTLEARERAHRQ 1883
Cdd:COG3096 633 QQLLEREREATVERDELAARKQALESQ 659
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
870-1078 |
2.93e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 2.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 870 EEKAALDKELM-TQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQgQLQQEREELLARMEAEKEE 948
Cdd:COG4942 27 AELEQLQQEIAeLEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELA-ELEKEIAELRAELEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 949 LSKEIAALQQ--ERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDaqsrQEQDRNTLNALTS 1026
Cdd:COG4942 106 LAELLRALYRlgRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE----LEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1027 ELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLE 1078
Cdd:COG4942 182 ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
723-1359 |
3.26e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 52.28 E-value: 3.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 723 EQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAERE 802
Cdd:pfam02463 172 KEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 803 GRTLSEEAIRLRLEKEALESSLFDVQ-RQLAQLEARREQLEADSQALLLAKETL-TGELAGLRQQVTSTEEKAALDKELM 880
Cdd:pfam02463 252 EIESSKQEIEKEEEKLAQVLKENKEEeKEKKLQEEELKLLAKEEEELKSELLKLeRRKVDDEEKLKESEKEKKKAEKELK 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 881 TQKLVQAEREAQ---ASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQ 957
Cdd:pfam02463 332 KEKEEIEELEKElkeLEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 958 QERDEGLLLAESEKQQALSLKESEKTALSEKLmgTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEE 1037
Cdd:pfam02463 412 ELARQLEDLLKEEKKEELEILEEEEESIELKQ--GKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELL 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1038 ATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLS 1117
Cdd:pfam02463 490 LSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRA 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1118 EGAKEREALRRSNE-ELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRE--LQ 1194
Cdd:pfam02463 570 LTELPLGARKLRLLiPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKEsgLR 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1195 ELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGL----RQRLLKGESSLEALKQELQGSQRKLQEQEAEF 1270
Cdd:pfam02463 650 KGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEilrrQLEIKKKEQREKEELKKLKLEAEELLADRVQE 729
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1271 RARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSA 1350
Cdd:pfam02463 730 AQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEE 809
|
....*....
gi 568931104 1351 LRRGLGLGR 1359
Cdd:pfam02463 810 LKEEAELLE 818
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1671-1901 |
3.28e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 52.22 E-value: 3.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1671 ERLDAARQALSEARRQSSSLgEQVQTLRGELASLELQRGDAEgqlqqlqqalrqrqegEAMALRSVQKLQEERRLLQERL 1750
Cdd:COG4913 235 DDLERAHEALEDAREQIELL-EPIRELAERYAAARERLAELE----------------YLRAALRLWFAQRRLELLEAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1751 GSLQRALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRshedtlRLNAERGRLDRTLTGAELDLAEAQQQIQHL 1830
Cdd:COG4913 298 EELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEALLAAL 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568931104 1831 EAQVDVALEGNHNpVQPEAGEQQLELQQEVERLRSAQVQTE---RTLEARERAHRQRVSGLEEQVSTLKAQLHQ 1901
Cdd:COG4913 372 GLPLPASAEEFAA-LRAEAAALLEALEEELEALEEALAEAEaalRDLRRELRELEAEIASLERRKSNIPARLLA 444
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
461-958 |
3.42e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 52.26 E-value: 3.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 461 GSVRKQLSDSEGE----RRGLEE--QLQRLRDQ-----TAASAQAQEDAQREAQRLRSANELLSREKGNLTHS---LQVT 526
Cdd:COG3096 225 SGVRKAFQDMEAAlrenRMTLEAirVTQSDRDLfkhliTEATNYVAADYMRHANERRELSERALELRRELFGArrqLAEE 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 527 QQQAKELRQELEKLQAAQEELKRQHNQLEDaQEDSVQEGARARRELERSHRQLEQLEVK-------RSGLTKELVEVREA 599
Cdd:COG3096 305 QYRLVEMARELEELSARESDLEQDYQAASD-HLNLVQTALRQQEKIERYQEDLEELTERleeqeevVEEAAEQLAEAEAR 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 600 LSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEAslrdsLSKMSALNESLAQDKLElnRLIAQLEEEKVA 679
Cdd:COG3096 384 LEAAEEEVDSLKSQLADYQQALDVQQTRAIQYQQAVQALEKARA-----LCGLPDLTPENAEDYLA--AFRAKEQQATEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 680 LLGRQQQAEHATTMAVEKQELLEQLR-LEQEVERQGlqgslcVAEQAREALEQQilvlrSERSHLQEQLAQLSRQLSgrd 758
Cdd:COG3096 457 VLELEQKLSVADAARRQFEKAYELVCkIAGEVERSQ------AWQTARELLRRY-----RSQQALAQRLQQLRAQLA--- 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 qELEQALRESQRQVEALERAARekeamakeraGLAVKLAAAEregrTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARR 838
Cdd:COG3096 523 -ELEQRLRQQQNAERLLEEFCQ----------RIGQQLDAAE----ELEELLAELEAQLEELEEQAAEAVEQRSELRQQL 587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 839 EQLEADSQALllaketltgelaglrqqvtsteekaaldkelmtQKLVQAEREAQASLreqraaheedlQRLQHEKEAAWR 918
Cdd:COG3096 588 EQLRARIKEL---------------------------------AARAPAWLAAQDAL-----------ERLREQSGEALA 623
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 568931104 919 ELQAERAQLQGQLQQEREELLARME--AEKEELSKEIAALQQ 958
Cdd:COG3096 624 DSQEVTAAMQQLLEREREATVERDElaARKQALESQIERLSQ 665
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
471-1221 |
3.67e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 52.10 E-value: 3.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 471 EGERRGLEEQLQRLRDQTAAS----AQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEE 546
Cdd:pfam01576 337 EEETRSHEAQLQEMRQKHTQAleelTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQE 416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 547 LKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEA 626
Cdd:pfam01576 417 LQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLED 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 627 GRAQLElslTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLrl 706
Cdd:pfam01576 497 ERNSLQ---EQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKL-- 571
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 707 eqeverqglqgslcvaEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAarekEAMA 786
Cdd:pfam01576 572 ----------------EKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRA----EAEA 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 787 KERAGLAVKLAAAEREGRTLSEEAIR----LRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGEL--- 859
Cdd:pfam01576 632 REKETRALSLARALEEALEAKEELERtnkqLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELqat 711
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 860 --AGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWR-ELQAERAQLQGQLQ---Q 933
Cdd:pfam01576 712 edAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKkKLELDLKELEAQIDaanK 791
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 934 EREEL---LARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLkESEKTALSEKLMGTrhslaaislemERQKRDA 1010
Cdd:pfam01576 792 GREEAvkqLKKLQAQMKDLQRELEEARASRDEILAQSKESEKKLKNL-EAELLQLQEDLAAS-----------ERARRQA 859
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1011 QSRQEQDRNTL-------NALTSELRDLRA---QLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDT 1080
Cdd:pfam01576 860 QQERDELADEIasgasgkSALQDEKRRLEAriaQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESA 939
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1081 RDGLRRELLEAQRKGRDSQDSSEA-HRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLA 1159
Cdd:pfam01576 940 RQQLERQNKELKAKLQEMEGTVKSkFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDERRHAD 1019
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568931104 1160 LLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRL 1221
Cdd:pfam01576 1020 QYKDQAEKGNSRMKQLKRQLEEAEEEASRANAARRKLQRELDDATESNESMNREVSTLKSKL 1081
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
726-1165 |
3.72e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 52.27 E-value: 3.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 726 REALEQQILVLRSERSHLQEQLAQLSRQlsgrdqeleqaLRESQRQVEALERAAREKEAMAkeragLAVKLAAAEREGRT 805
Cdd:PRK04863 781 RAAREKRIEQLRAEREELAERYATLSFD-----------VQKLQRLHQAFSRFIGSHLAVA-----FEADPEAELRQLNR 844
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 806 LSEEAIRlrlEKEALESSLFDVQRQLAQLEARREQLEA-DSQALLLAKETLTGELAGLRQQVTSTEEkAALDKELMTQKL 884
Cdd:PRK04863 845 RRVELER---ALADHESQEQQQRSQLEQAKEGLSALNRlLPRLNLLADETLADRVEEIREQLDEAEE-AKRFVQQHGNAL 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 885 VQAEREAqASLREQRAAHEedlqrlqhekeaawrELQAERAQLQGQLQQEREELLARmeaekEELSKEIAALQQERDEGL 964
Cdd:PRK04863 921 AQLEPIV-SVLQSDPEQFE---------------QLKQDYQQAQQTQRDAKQQAFAL-----TEVVQRRAHFSYEDAAEM 979
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 965 LLAESEKQQALSLK----ESEKTALSEKLMGTRHSLAaislEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATA 1040
Cdd:PRK04863 980 LAKNSDLNEKLRQRleqaEQERTRAREQLRQAQAQLA----QYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAE 1055
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1041 AHAQTVKelEERTGNLGRQREACmreaEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGA 1120
Cdd:PRK04863 1056 ERARARR--DELHARLSANRSRR----NQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKAGWCAVLRLVKDNG 1129
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1121 KEREALRR-----SNEELRSAVKKAESeriSLKLA---NEDKEQKLALLEEAR 1165
Cdd:PRK04863 1130 VERRLHRRelaylSADELRSMSDKALG---ALRLAvadNEHLRDVLRLSEDPK 1179
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
488-778 |
4.11e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.22 E-value: 4.11e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 488 TAASAQAQEDAQREaQRLRSANELLSreKGNLTHSLQV---TQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQE 564
Cdd:PRK11281 37 TEADVQAQLDALNK-QKLLEAEDKLV--QQDLEQTLALldkIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 565 garARRELERshRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEAS 644
Cdd:PRK11281 114 ---TRETLST--LSLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRLQQIRNLLKGGKVGGKA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 645 LRDSLSKM-----SALNESLAQDKLEL---NRLIAQLEEEKVALLGRQQQAEHATTmavEKQELLEQLRLEQEverqglq 716
Cdd:PRK11281 189 LRPSQRVLlqaeqALLNAQNDLQRKSLegnTQLQDLLQKQRDYLTARIQRLEHQLQ---LLQEAINSKRLTLS------- 258
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 717 gslcvAEQAREALEQQILVLRSERSHLQEQLA---QLSRQLSGRDQELEQALRESQRQVEALERA 778
Cdd:PRK11281 259 -----EKTVQEAQSQDEAARIQANPLVAQELEinlQLSQRLLKATEKLNTLTQQNLRVKNWLDRL 318
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
452-915 |
5.63e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 51.60 E-value: 5.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 452 RYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANEL-------------LSREKGN 518
Cdd:PRK03918 232 ELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKaeeyiklsefyeeYLDELRE 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 519 LTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQED--SVQEGARARRELERSHRQLEQLEVKRSGLTKELV-- 594
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRleELEERHELYEEAKAKKEELERLKKRLTGLTPEKLek 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 595 ----------EVREALSCAILQRDVLQTEKAEVAEALTKAEagRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKL 664
Cdd:PRK03918 392 eleelekakeEIEEEISKITARIGELKKEIKELKKAIEELK--KAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELK 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 665 ELNRLIAQLEEEKVALLGRQQQAEHATTMavekQELLEQLR-LEQEVERQGLQgSLCVAEQAREALEQQILVLRSERSHL 743
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKESELIKL----KELAEQLKeLEEKLKKYNLE-ELEKKAEEYEKLKEKLIKLKGEIKSL 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 744 QEQLAQLsRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKEraglavKLAAAEREGRTLSEEAIRLRLEKEALESS 823
Cdd:PRK03918 545 KKELEKL-EELKKKLAELEKKLDELEEELAELLKELEELGFESVE------ELEERLKELEPFYNEYLELKDAEKELERE 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 824 LFDVQRQLAQLEARREQLEADSQALllakETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHE 903
Cdd:PRK03918 618 EKELKKLEEELDKAFEELAETEKRL----EELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIK 693
|
490
....*....|..
gi 568931104 904 EDLQRLQHEKEA 915
Cdd:PRK03918 694 KTLEKLKEELEE 705
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1118-1908 |
6.19e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 51.68 E-value: 6.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1118 EGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGElrASLQEVERSRLEARRELQELR 1197
Cdd:PTZ00121 1057 EGKAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEE--ARKAEEAKKKAEDARKAEEAR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1198 RQMKTLDSDNGRLGREladlQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGL 1277
Cdd:PTZ00121 1135 KAEDARKAEEARKAED----AKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEE 1210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1278 LGSLEEARGAEKrlldsarslELRLEAVRaetselglrlSAAEGRAQglEVELARVEAQRRVAEAQLGGLRSALRRGLGL 1357
Cdd:PTZ00121 1211 ERKAEEARKAED---------AKKAEAVK----------KAEEAKKD--AEEAKKAEEERNNEEIRKFEEARMAHFARRQ 1269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1358 GRVSSSPAREApaggsgdglsspspleysprsqppspgliaspappdldpEAVRDAlrdflQELRSAQRERDELKVQTST 1437
Cdd:PTZ00121 1270 AAIKAEEARKA---------------------------------------DELKKA-----EEKKKADEAKKAEEKKKAD 1305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1438 LSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECRAtlDQMAVLERSLQATES 1517
Cdd:PTZ00121 1306 EAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA--AEKKKEEAKKKADAA 1383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1518 ELRAsqEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRsrlglgdrEAHAQALQDRVDSLQRQVA 1597
Cdd:PTZ00121 1384 KKKA--EEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD--------EAKKKAEEAKKADEAKKKA 1453
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1598 DSEVKAGTLQltverlsgalAKVEESEGnlrskvqslTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAAR 1677
Cdd:PTZ00121 1454 EEAKKAEEAK----------KKAEEAKK---------ADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1678 QALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLqqalrqrqegEAMALRSVQKLQEERRLLQERLGSLQRAL 1757
Cdd:PTZ00121 1515 AKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAE----------ELKKAEEKKKAEEAKKAEEDKNMALRKAE 1584
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1758 AQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRSHEdtLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVA 1837
Cdd:PTZ00121 1585 EAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEE--LKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK 1662
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1838 LEGNHNPVQPEAGEQQlELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEEQVSTLKAQLHQELRRSSA 1908
Cdd:PTZ00121 1663 AAEEAKKAEEDKKKAE-EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKA 1732
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
531-1222 |
7.30e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 7.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 531 KELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALScAILQRDVL 610
Cdd:TIGR00618 166 KELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQ-QTQQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 611 QTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLrdslskmsalneSLAQDKLELNRLIAQLEEEKVALLGRQQQAEHA 690
Cdd:TIGR00618 245 LTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVL------------EETQERINRARKAAPLAAHIKAVTQIEQQAQRI 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 691 TTMAVEKQELLEQLR------LEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLS--RQLSGRDQELE 762
Cdd:TIGR00618 313 HTELQSKMRSRAKLLmkraahVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQhiHTLQQQKTTLT 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 763 QALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFD---VQRQLAQLEARRE 839
Cdd:TIGR00618 393 QKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLekiHLQESAQSLKERE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 840 QLEADSQALLLaKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLR------EQRAAHEEDLQRLQHEK 913
Cdd:TIGR00618 473 QQLQTKEQIHL-QETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRrmqrgeQTYAQLETSEEDVYHQL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 914 EAAWRELQAERAQLQgQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKEsEKTALSEKLMGTR 993
Cdd:TIGR00618 552 TSERKQRASLKEQMQ-EIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHA-LLRKLQPEQDLQD 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 994 HSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQ 1073
Cdd:TIGR00618 630 VRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLREL 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1074 LRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKlanED 1153
Cdd:TIGR00618 710 ETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLA---AE 786
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1154 KEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLA 1222
Cdd:TIGR00618 787 IQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE 855
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
733-983 |
7.54e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 51.08 E-value: 7.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 733 ILVLRSERSHLQEQLAQLS----RQLSGRDQ--ELEQALRESQRQVEALE--RAAREKEAMAKERAGLAVKLaaaeregr 804
Cdd:PRK05771 11 IVTLKSYKDEVLEALHELGvvhiEDLKEELSneRLRKLRSLLTKLSEALDklRSYLPKLNPLREEKKKVSVK-------- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 805 tlSEEAIRLRLEKEA--LESSLFDVQRQLAQLEARREQLEADSQAL------------LLAKETLTGELAGL------RQ 864
Cdd:PRK05771 83 --SLEELIKDVEEELekIEKEIKELEEEISELENEIKELEQEIERLepwgnfdldlslLLGFKYVSVFVGTVpedkleEL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 865 QVTSTEEKAALDKELMTQK--LVQAEREAQASLREQRAAHEEDLQRLQHEKEAAwrelqaeraqlqgQLQQEREELLARM 942
Cdd:PRK05771 161 KLESDVENVEYISTDKGYVyvVVVVLKELSDEVEEELKKLGFERLELEEEGTPS-------------ELIREIKEELEEI 227
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568931104 943 EAEKEELSKEIAALQQERDE------GLLLAESEKQQALS-LKESEKT 983
Cdd:PRK05771 228 EKERESLLEELKELAKKYLEellalyEYLEIELERAEALSkFLKTDKT 275
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1611-1900 |
7.72e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.21 E-value: 7.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1611 ERLSGALAKVEESEGNLRSKVQS------LTDALTQSSASLSSTQDKNLH-----LQKALSTCEHDRQVLQERLDAARQA 1679
Cdd:TIGR02168 189 DRLEDILNELERQLKSLERQAEKaerykeLKAELRELELALLVLRLEELReeleeLQEELKEAEEELEELTAELQELEEK 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1680 LSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQ 1759
Cdd:TIGR02168 269 LEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1760 LEAEKRDLERSALQFDKDRVALRKTLDKVE--REKLRSHEDTLR-----LNAERGRLDRTLTGAELDLAEAQQQIQHLEA 1832
Cdd:TIGR02168 349 LKEELESLEAELEELEAELEELESRLEELEeqLETLRSKVAQLElqiasLNNEIERLEARLERLEDRRERLQQEIEELLK 428
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 1833 QVDVALEGNHNPVQPEAGEQQLELQQEVERLrsaqVQTERTLEARERAHRQRVSGLEEQVSTLKAQLH 1900
Cdd:TIGR02168 429 KLEEAELKELQAELEELEEELEELQEELERL----EEALEELREELEEAEQALDAAERELAQLQARLD 492
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
464-898 |
8.66e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.92 E-value: 8.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 464 RKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLS--REKGNLTHSLQVTQQQAKELRQELEKLQ 541
Cdd:COG4717 80 LKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEELEERLEELR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 542 AAQEELKRQHNQLEDAQEDSVQEG-------------------------ARARRELERSHRQLEQLEVKRSGLTKELVEV 596
Cdd:COG4717 160 ELEEELEELEAELAELQEELEELLeqlslateeelqdlaeeleelqqrlAELEEELEEAQEELEELEEELEQLENELEAA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 597 REALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEE 676
Cdd:COG4717 240 ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEE 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 677 KVallgrqqqaehattmavekQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQ-QILVLRSERSHLQEQLAQLSRQLS 755
Cdd:COG4717 320 EL-------------------EELLAALGLPPDLSPEELLELLDRIEELQELLREaEELEEELQLEELEQEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 756 GRD-QELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREgrTLSEEAIRLRLEKEALESSLFDVQRQLAQL 834
Cdd:COG4717 381 VEDeEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--ELEEELEELEEELEELEEELEELREELAEL 458
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 835 EARREQLEADSQAlllakETLTGELAGLRQQVTSTEEKAALDK---ELMTQKLVQAEREAQASLREQ 898
Cdd:COG4717 459 EAELEQLEEDGEL-----AELLQELEELKAELRELAEEWAALKlalELLEEAREEYREERLPPVLER 520
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1452-1691 |
9.76e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 9.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1452 AASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKA 1531
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1532 TEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDR----EAHAQALQDRVDSLQRQVADSEVKAGTLQ 1607
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRlqylKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1608 LTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKalstcehDRQVLQERLDAARQALSEARRQS 1687
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQ-------EAEELEALIARLEAEAAAAAERT 243
|
....
gi 568931104 1688 SSLG 1691
Cdd:COG4942 244 PAAG 247
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
493-942 |
9.92e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 493 QAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQeELKRQHNQLEDAQEDSVQEGARArREL 572
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELPERL-EEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 573 ERSHRQLEQLEVKRSGLTKELVEVREALscAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKM 652
Cdd:COG4717 152 EERLEELRELEEELEELEAELAELQEEL--EELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEEL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 653 SALNESLAQDKLElnrliaqleeekvallgRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQ 732
Cdd:COG4717 230 EQLENELEAAALE-----------------ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLL 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 733 ILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIR 812
Cdd:COG4717 293 LAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 813 LRLEKEALESSLFDVQRQLAQLEARREQLEadsqALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLVQAEREAQ 892
Cdd:COG4717 373 AALLAEAGVEDEEELRAALEQAEEYQELKE----ELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEEL 448
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 568931104 893 ASLREQRAAHEEDLQRLQHEKEAAwrELQAERAQLQGQLQQEREELLARM 942
Cdd:COG4717 449 EELREELAELEAELEQLEEDGELA--ELLQELEELKAELRELAEEWAALK 496
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
759-1266 |
1.02e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.72 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQALRESQRQVEALeRAAREKEAMAKERAGLAVKLAAAE-----REGRTLSEEAIRLRLE----KEAL---ESSLFD 826
Cdd:COG3096 232 QDMEAALRENRMTLEAI-RVTQSDRDLFKHLITEATNYVAADymrhaNERRELSERALELRRElfgaRRQLaeeQYRLVE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 827 VQRQLAQLEARREQLEADSQAlllAKETLTGELAGLRQQvtsteekaaldkelmtqklvqaereaqaslrEQRAAHEEDL 906
Cdd:COG3096 311 MARELEELSARESDLEQDYQA---ASDHLNLVQTALRQQ-------------------------------EKIERYQEDL 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 907 QRLqhekEAAWRELQAERAQLQGQlQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAeSEKQQALSLKESEKTALS 986
Cdd:COG3096 357 EEL----TERLEEQEEVVEEAAEQ-LAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTRA-IQYQQAVQALEKARALCG 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 987 eklmgtrhsLAAISLEmerqkrDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGR-QREACMR 1065
Cdd:COG3096 431 ---------LPDLTPE------NAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEvERSQAWQ 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1066 EAEELRTQLRvledtrdglrrelleaqrkgrdsqdSSEAHRQEASELRRSLSEgAKEREALRRSNEELRSAVKKAESERI 1145
Cdd:COG3096 496 TARELLRRYR-------------------------SQQALAQRLQQLRAQLAE-LEQRLRQQQNAERLLEEFCQRIGQQL 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1146 SlklANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLdsdngrlgRELADLQGRLALGE 1225
Cdd:COG3096 550 D---AAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKELAARAPAW--------LAAQDALERLREQS 618
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 568931104 1226 RTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQ 1266
Cdd:COG3096 619 GEALADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
761-1126 |
1.02e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.51 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 761 LEQALRESQRQVEALERAAREK-EAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAqlearre 839
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKfEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMA------- 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 840 qLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMtqklvQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRE 919
Cdd:pfam17380 344 -MERERELERIRQEERKRELERIRQEEIAMEISRMRELERL-----QMERQQKNERVRQELEAARKVKILEEERQRKIQQ 417
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 920 LQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERdeglllaeseKQQALSLKESEKTALSEKlmgtrhslaai 999
Cdd:pfam17380 418 QKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQER----------QQQVERLRQQEEERKRKK----------- 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1000 sLEMERQKRDAQSRQEQDRNTLNaltSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREacMREAEELRTQLRVLED 1079
Cdd:pfam17380 477 -LELEKEKRDRKRAEEQRRKILE---KELEERKQAMIEEERKRKLLEKEMEERQKAIYEEER--RREAEEERRKQQEMEE 550
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 568931104 1080 trdglRRELLEAQRKGRDSQDSSEAHRQEaSELRRSLSEGAKEREAL 1126
Cdd:pfam17380 551 -----RRRIQEQMRKATEERSRLEAMERE-REMMRQIVESEKARAEY 591
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
470-1163 |
1.24e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 50.57 E-value: 1.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 470 SEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELlSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEelKR 549
Cdd:PRK10246 214 TPEQVQSLTASLQVLTDEEKQLLTAQQQQQQSLNWLTRLDEL-QQEASRRQQALQQALAAEEKAQPQLAALSLAQP--AR 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 550 QHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKelvevrealsCAILQRDVLQTEKAEVAEALTKAEAGRa 629
Cdd:PRK10246 291 QLRPHWERIQEQSAALAHTRQQIEEVNTRLQSTMALRARIRH----------HAAKQSAELQAQQQSLNTWLAEHDRFR- 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 630 QLELSLTKLRAEEASLRDSLSKMSALNESLAQDKlelnrliaqleeekvallgRQQQAEHATTMAVEKQELLEQLRLEQE 709
Cdd:PRK10246 360 QWNNELAGWRAQFSQQTSDREQLRQWQQQLTHAE-------------------QKLNALPAITLTLTADEVAAALAQHAE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 710 verqglqgslcvaeqaREALEQQILVLRSERSHLQEQLAQLsrqlsgrdQELEQALRESQRQVEALeRAAREKEAMAKER 789
Cdd:PRK10246 421 ----------------QRPLRQRLVALHGQIVPQQKRLAQL--------QVAIQNVTQEQTQRNAA-LNEMRQRYKEKTQ 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 790 AGLAVKlAAAEREGRTLSEEAIRLRLEK------------------EALESSlfDVQRQLAQLEARREQLEADSQALLla 851
Cdd:PRK10246 476 QLADVK-TICEQEARIKDLEAQRAQLQAgqpcplcgstshpaveayQALEPG--VNQSRLDALEKEVKKLGEEGAALR-- 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 852 ketltGELAGLRQQVT-STEEKAALDKElmTQKLVQAEREAQASLREQRAAHEeDLQRLQHEKEAAWREL------QAER 924
Cdd:PRK10246 551 -----GQLDALTKQLQrDESEAQSLRQE--EQALTQQWQAVCASLNITLQPQD-DIQPWLDAQEEHERQLrllsqrHELQ 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 925 AQLQGQLQQEREeLLARMEAEKEELSKEIAA----LQQERDEGLLLAESEKQ-QALSLKESEKTALSEKLMGTRHSLAAI 999
Cdd:PRK10246 623 GQIAAHNQQIIQ-YQQQIEQRQQQLLTALAGyaltLPQEDEEASWLATRQQEaQSWQQRQNELTALQNRIQQLTPLLETL 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1000 SLEMERQKRDAQSRQEQDRNTLN---ALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREA---EELRTQ 1073
Cdd:PRK10246 702 PQSDDLPHSEETVALDNWRQVHEqclSLHSQLQTLQQQDVLEAQRLQKAQAQFDTALQASVFDDQQAFLAAlldEETLTQ 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1074 LRVLEDTrdgLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANED 1153
Cdd:PRK10246 782 LEQLKQN---LENQRQQAQTLVTQTAQALAQHQQHRPDGLDLTVTVEQIQQELAQLAQQLRENTTRQGEIRQQLKQDADN 858
|
730
....*....|
gi 568931104 1154 KEQKLALLEE 1163
Cdd:PRK10246 859 RQQQQALMQQ 868
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
556-815 |
1.26e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 556 DAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSL 635
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 636 TKLRAEEASLRDSLSKMSALNeslaqdklelnrliaqleeeKVALLGRQQQAEHATTMAvekqELLEQLRLEQEVERQGL 715
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQP--------------------PLALLLSPEDFLDAVRRL----QYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 716 QGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVK 795
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
250 260
....*....|....*....|
gi 568931104 796 LAAAEREGRTLSEEAIRLRL 815
Cdd:COG4942 236 AAAAAERTPAAGFAALKGKL 255
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
918-1353 |
1.33e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 918 RELQAERAQLQGQLQQER--EELLARMEAEKEELSKEIAALQQERDEglllaESEKQQALSLKESEKTALSEKLMGTRHS 995
Cdd:PRK03918 172 KEIKRRIERLEKFIKRTEniEELIKEKEKELEEVLREINEISSELPE-----LREELEKLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 996 LAAISLEMERQKRDAQSRQEQdrntLNALTSELRDLRAQLEEATaahaqTVKELEERTGNLGRQREACMREAEELRTQLR 1075
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEER----IEELKKEIEELEEKVKELK-----ELKEKAEEYIKLSEFYEEYLDELREIEKRLS 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1076 VLEDTRDGLRRELLEAQRKGRdsqdsseahrqEASELRRSLSEGAKEREALRRSNEELRSA-VKKAESERISLKLANEDK 1154
Cdd:PRK03918 318 RLEEEINGIEERIKELEEKEE-----------RLEELKKKLKELEKRLEELEERHELYEEAkAKKEELERLKKRLTGLTP 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1155 EQKLALLEEARvsvaKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRL---GRELADLQGRLALGERTEKES 1231
Cdd:PRK03918 387 EKLEKELEELE----KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcGRELTEEHRKELLEEYTAELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1232 RrealgLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARErgllgSLEEARGAEKRL----LDSARSLELRLEAVRA 1307
Cdd:PRK03918 463 R-----IEKELKEIEEKERKLRKELRELEKVLKKESELIKLKE-----LAEQLKELEEKLkkynLEELEKKAEEYEKLKE 532
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 568931104 1308 ETSELGLRLSAAEG---RAQGLEVELARVEAQRRVAEAQLGGLRSALRR 1353
Cdd:PRK03918 533 KLIKLKGEIKSLKKeleKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
445-1007 |
1.37e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.45 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 445 QVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLrdqtaasaqaqEDAQREAQRLRSANELLSREKGNLTHSLQ 524
Cdd:PRK03918 194 LIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-----------EELKEEIEELEKELESLEGSKRKLEEKIR 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 525 VTQQQAKELRQELEKLQAAQEELK------RQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVRE 598
Cdd:PRK03918 263 ELEERIEELKKEIEELEEKVKELKelkekaEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEE 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 599 ALScailQRDVLQTEKAEVAEALTKAEAGRAQLElSLTKLRAEEASLrdSLSKMSALNESLAQDKLELNRLIAQLEEEKV 678
Cdd:PRK03918 343 LKK----KLKELEKRLEELEERHELYEEAKAKKE-ELERLKKRLTGL--TPEKLEKELEELEKAKEEIEEEISKITARIG 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 679 ALLGRQQQAEHATTmavekqelleqlRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEqLAQLSRQLSGRD 758
Cdd:PRK03918 416 ELKKEIKELKKAIE------------ELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRIEKELKE-IEEKERKLRKEL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLfdvqRQLAQLEARR 838
Cdd:PRK03918 483 RELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL----EKLEELKKKL 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 839 EQLEADSQALllaketltgelaglrqqvtsTEEKAALDKELmTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAawR 918
Cdd:PRK03918 559 AELEKKLDEL--------------------EEELAELLKEL-EELGFESVEELEERLKELEPFYNEYLELKDAEKEL--E 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 919 ELQAERAQLQGQLQQEREElLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAA 998
Cdd:PRK03918 616 REEKELKKLEEELDKAFEE-LAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKK 694
|
....*....
gi 568931104 999 ISLEMERQK 1007
Cdd:PRK03918 695 TLEKLKEEL 703
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
670-874 |
1.44e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 670 IAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQ 749
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 750 LSRQLSGR------------------DQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAI 811
Cdd:COG4942 102 QKEELAELlralyrlgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568931104 812 RLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAA 874
Cdd:COG4942 182 ELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1115-1319 |
1.62e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1115 SLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQ 1194
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1195 ELRRQMKTLDSDNGRLGR-----------ELADLQGRLALGERTEKESRREALGLR----------QRLLKGESSLEALK 1253
Cdd:COG4942 101 AQKEELAELLRALYRLGRqpplalllspeDFLDAVRRLQYLKYLAPARREQAEELRadlaelaalrAELEAERAELEALL 180
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568931104 1254 QELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAA 1319
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
812-1000 |
2.20e-05 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 49.69 E-value: 2.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 812 RLRLEKEALESSLFDVQRQLAQLEARREQLEADsqalllaketltgelaglrQQVTSTEEKAALDKELmtqklvQAEREA 891
Cdd:COG0542 401 RVRMEIDSKPEELDELERRLEQLEIEKEALKKE-------------------QDEASFERLAELRDEL------AELEEE 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 892 QASLREQRAAHEEDLQRLQHEKEAAwRELQAERAQLQGQLQQEREELLARMEAEKEELSKE-IAA---------LQQerd 961
Cdd:COG0542 456 LEALKARWEAEKELIEEIQELKEEL-EQRYGKIPELEKELAELEEELAELAPLLREEVTEEdIAEvvsrwtgipVGK--- 531
|
170 180 190
....*....|....*....|....*....|....*....
gi 568931104 962 egllLAESEKQQALSLKEsektALSEKLMGTRHSLAAIS 1000
Cdd:COG0542 532 ----LLEGEREKLLNLEE----ELHERVIGQDEAVEAVA 562
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1079-1598 |
2.39e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 49.65 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1079 DTRDGLRRelLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKL 1158
Cdd:PRK02224 173 DARLGVER--VLSDQRGSLDQLKAQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERR 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1159 ALLEEarvsVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNgrlgrelADLQGRLALGErtekeSRREALGL 1238
Cdd:PRK02224 251 EELET----LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEER-------DDLLAEAGLDD-----ADAEAVEA 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1239 RQrllkgeSSLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSA 1318
Cdd:PRK02224 315 RR------EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEE 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1319 AEGRAQGLEVELARVEAQRRVAEAQLGGL---RSALRRGLGLGRVSSSPAREAPAGG-----SGDGLSSPSPLEYSPRSq 1390
Cdd:PRK02224 389 LEEEIEELRERFGDAPVDLGNAEDFLEELreeRDELREREAELEATLRTARERVEEAealleAGKCPECGQPVEGSPHV- 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1391 ppspgliaspappdldpeavrDALRDFLQELRSAQRERDELKVQTSTLSQ------QLVEMEAERDHAASRAKQLQKAVA 1464
Cdd:PRK02224 468 ---------------------ETIEEDRERVEELEAELEDLEEEVEEVEErleraeDLVEAEDRIERLEERREDLEELIA 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1465 -------ESEEAWRSADRRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESE---LRASQEKVSKMKATEA 1534
Cdd:PRK02224 527 erretieEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERiesLERIRTLLAAIADAED 606
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1535 KLESDKRRLKEVLDASESRSIKLELQR---RALEGELQrsrlglGDREAHAQALQDRVDSLQRQVAD 1598
Cdd:PRK02224 607 EIERLREKREALAELNDERRERLAEKRerkRELEAEFD------EARIEEAREDKERAEEYLEQVEE 667
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
471-792 |
2.59e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 49.12 E-value: 2.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 471 EGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQ 550
Cdd:pfam07888 72 ERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETE 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 551 HNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQ 630
Cdd:pfam07888 152 LERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAE 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 631 LELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVallgrqqQAEHATTMAVEKQELLEQLRLEQEV 710
Cdd:pfam07888 232 NEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELHQARL-------QAAQLTLQLADASLALREGRARWAQ 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 711 ERQGLQGSLCVAEQAREALEQQIL----VLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMA 786
Cdd:pfam07888 305 ERETLQQSAEADKDRIEKLSAELQrleeRLQEERMEREKLEVELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQ 384
|
....*.
gi 568931104 787 KERAGL 792
Cdd:pfam07888 385 AEKQEL 390
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1414-1879 |
2.63e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 49.29 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1414 LRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLsGAQAELALQEESVRR 1493
Cdd:PRK03918 219 LREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKV-KELKELKEKAEEYIK 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1494 SKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIKLEL--QRRALEGELQRS 1571
Cdd:PRK03918 298 LSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1572 RLGLGDR-----EAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEESEGNLRSKVQSLTDALTQSSASLS 1646
Cdd:PRK03918 378 KKRLTGLtpeklEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEY 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1647 STQDKNlhLQKALSTCEHDRQVLQERLDAARQALSEARRQSS--SLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQ 1724
Cdd:PRK03918 458 TAELKR--IEKELKEIEEKERKLRKELRELEKVLKKESELIKlkELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLI 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1725 RQEGEAMALRS----VQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSALQFDKDRValrKTLDKVERE--KLRSHED 1798
Cdd:PRK03918 536 KLKGEIKSLKKelekLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERL---KELEPFYNEylELKDAEK 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1799 TL-RLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNHNPVQPEAGEQQLELQQEVERLRSAQVQTERTLEAR 1877
Cdd:PRK03918 613 ELeREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEI 692
|
..
gi 568931104 1878 ER 1879
Cdd:PRK03918 693 KK 694
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
510-1144 |
3.50e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.91 E-value: 3.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 510 ELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARaRRELERSHRQLEQLEVKRSGL 589
Cdd:PRK03918 193 ELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESL-EGSKRKLEEKIRELEERIEEL 271
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 590 TKELVEVREALScAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAqdklELNRL 669
Cdd:PRK03918 272 KKEIEELEEKVK-ELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLE----ELKKK 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 670 IAQLEEEKVALLGRQQQAEhattMAVEKQELLEQLRLEqeverqglqgslcVAEQAREALEQQILVLRSERSHLQEQLaq 749
Cdd:PRK03918 347 LKELEKRLEELEERHELYE----EAKAKKEELERLKKR-------------LTGLTPEKLEKELEELEKAKEEIEEEI-- 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 750 lsRQLSGRDQELEQALRESQRQVEALERAAREKEAMakeraglavklaaaereGRTLSEEAIRLRLEKEALEssLFDVQR 829
Cdd:PRK03918 408 --SKITARIGELKKEIKELKKAIEELKKAKGKCPVC-----------------GRELTEEHRKELLEEYTAE--LKRIEK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 830 QLAQLEARREQLEADSQAL--LLAKETLTGELAGLRQQVTSTEEKAaldKELMTQKLVQAEREAQaSLREQRAAHEEDLQ 907
Cdd:PRK03918 467 ELKEIEEKERKLRKELRELekVLKKESELIKLKELAEQLKELEEKL---KKYNLEELEKKAEEYE-KLKEKLIKLKGEIK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 908 RLQHEKEAAwRELQAERAQLQ---GQLQQEREELLARMEAEK----EELSKEIAALQQERDEGLLL--AESEKQQALSLK 978
Cdd:PRK03918 543 SLKKELEKL-EELKKKLAELEkklDELEEELAELLKELEELGfesvEELEERLKELEPFYNEYLELkdAEKELEREEKEL 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 979 ESEKTALS---EKLMGTRHSLAAISLEMER-QKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTG 1054
Cdd:PRK03918 622 KKLEEELDkafEELAETEKRLEELRKELEElEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKE 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1055 NLGRQREAcMREAEELRTQLRVLEDTRDGLRRelLEAQRKGRDSQDSSEAhrqeASELRRSLSEGAKEREALRRSNEELR 1134
Cdd:PRK03918 702 ELEEREKA-KKELEKLEKALERVEELREKVKK--YKALLKERALSKVGEI----ASEIFEELTEGKYSGVRVKAEENKVK 774
|
650
....*....|
gi 568931104 1135 SAVKKAESER 1144
Cdd:PRK03918 775 LFVVYQGKER 784
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1406-1884 |
3.64e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.19 E-value: 3.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1406 DPEAVRDALRDFLQELRSAQRERDELK----VQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQ 1481
Cdd:PRK04863 234 DMEAALRENRMTLEAIRVTQSDRDLFKhlitESTNYVAADYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMA 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1482 AELALQEESvrrskrecratldqmavlersLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASEsrsiKLELQR 1561
Cdd:PRK04863 314 RELAELNEA---------------------ESDLEQDYQAASDHLNLVQTALRQQEKIERYQADLEELEE----RLEEQN 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1562 RALEGelqrSRLGLGDREAHAQALQDRVDSLQRQVAD-------SEVKAGTLQLTVERLSGA----------LAKVEESE 1624
Cdd:PRK04863 369 EVVEE----ADEQQEENEARAEAAEEEVDELKSQLADyqqaldvQQTRAIQYQQAVQALERAkqlcglpdltADNAEDWL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1625 GNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKALS-----TCEHDRQVLQerlDAARQALSEARRQSSsLGEQVQTLRG 1699
Cdd:PRK04863 445 EEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiAGEVSRSEAW---DVARELLRRLREQRH-LAEQLQQLRM 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1700 ELASLElQRgdaegqlqqlqqalrqrqegeamaLRSVQKLQEERRLLQERLGS-------LQRALAQLEAEKRDLERSAL 1772
Cdd:PRK04863 521 RLSELE-QR------------------------LRQQQRAERLLAEFCKRLGKnlddedeLEQLQEELEARLESLSESVS 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1773 QFDKDRVALRKTLDKvereklrshedtlrLNAERGRLdrtltgaeldlaeAQQQIQHLEAQVDVALEGNHNPVQPEAGEQ 1852
Cdd:PRK04863 576 EARERRMALRQQLEQ--------------LQARIQRL-------------AARAPAWLAAQDALARLREQSGEEFEDSQD 628
|
490 500 510
....*....|....*....|....*....|...
gi 568931104 1853 QLEL-QQEVERLRSAQVQTERTLEARERAHRQR 1884
Cdd:PRK04863 629 VTEYmQQLLERERELTVERDELAARKQALDEEI 661
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
439-1205 |
3.68e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 49.02 E-value: 3.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 439 LHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANEllsrekgn 518
Cdd:pfam01576 238 LAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALKTELE-------- 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 519 LTHSLQVTQQQAKELR-QELEKLQAAQEELKRQHN-QLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEV 596
Cdd:pfam01576 310 DTLDTTAAQQELRSKReQEVTELKKALEEETRSHEaQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAEL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 597 REALScailqrdVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEE 676
Cdd:pfam01576 390 QAELR-------TLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKD 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 677 kVALLGRQQQAEHATTMAVEKQELLEQLRLEQ-EVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLS 755
Cdd:pfam01576 463 -VSSLESQLQDTQELLQEETRQKLNLSTRLRQlEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLE 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 756 GRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLE 835
Cdd:pfam01576 542 ALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYA 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 836 ARREQLEADsqalllAKETLTGELAGLRQQVTSTEEKAALDKelmTQKLVQAEREAQASlreqraaHEEDLQRLQHEKEA 915
Cdd:pfam01576 622 EERDRAEAE------AREKETRALSLARALEEALEAKEELER---TNKQLRAEMEDLVS-------SKDDVGKNVHELER 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 916 AWRELQAERAQLQGQLQQEREELlarmeaekeelskeiaalqQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHS 995
Cdd:pfam01576 686 SKRALEQQVEEMKTQLEELEDEL-------------------QATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQ 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 996 LAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTG---NLGRQREACMREAEELRT 1072
Cdd:pfam01576 747 LVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAqmkDLQRELEEARASRDEILA 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1073 QLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANE 1152
Cdd:pfam01576 827 QSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTE 906
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 568931104 1153 DKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDS 1205
Cdd:pfam01576 907 LLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEG 959
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
464-982 |
3.90e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 48.59 E-value: 3.90e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 464 RKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSAnelLSREKGNLTHSLQVTQQQAKEL-RQELEKLQA 542
Cdd:pfam07111 161 EEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQ---LSKTQEELEAQVTLVESLRKYVgEQVPPEVHS 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 543 AQEELKRQHnqledaQEDSVQEGARARRELERShrqLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALT 622
Cdd:pfam07111 238 QTWELERQE------LLDTMQHLQEDRADLQAT---VELLQVRVQSLTHMLALQEEELTRKIQPSDSLEPEFPKKCRSLL 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 623 KaeAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQdklelnRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLE 702
Cdd:pfam07111 309 N--RWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQE------QVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQM 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 703 QLRLEQEVERQGLQGSLCVAEQareaLEQQILVLRSERSHLQEQLAQLSrQLSGRDQELEQALRESQRQVEALERAAREK 782
Cdd:pfam07111 381 ELSRAQEARRRQQQQTASAEEQ----LKFVVNAMSSTQIWLETTMTRVE-QAVARIPSLSNRLSYAVRKVHTIKGLMARK 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 783 EAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEAR-REQLEADSQALLLAKETLTGEL-- 859
Cdd:pfam07111 456 VALAQLRQESCPPPPPAPPVDADLSLELEQLREERNRLDAELQLSAHLIQQEVGRaREQGEAERQQLSEVAQQLEQELqr 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 860 -------------AGLRQQVTSTEEKAALDKELMTQK------LVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWREL 920
Cdd:pfam07111 536 aqeslasvgqqleVARQGQQESTEEAASLRQELTQQQeiygqaLQEKVAEVETRLREQLSDTKRRLNEARREQAKAVVSL 615
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 921 QaeRAQLQGQLQQEREELLARM--EAEKEELSKEIAALQQ-ERDEGLLLAESEKQQALSLKESEK 982
Cdd:pfam07111 616 R--QIQHRATQEKERNQELRRLqdEARKEEGQRLARRVQElERDKNLMLATLQQEGLLSRYKQQR 678
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
759-1277 |
4.03e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.80 E-value: 4.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQALRESQRQVEALERAARE----KEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEK-------EALESSLFDV 827
Cdd:PRK04863 233 QDMEAALRENRMTLEAIRVTQSDrdlfKHLITESTNYVAADYMRHANERRVHLEEALELRRELytsrrqlAAEQYRLVEM 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 828 QRQLAQLEARREQLEADSQAlllAKETLTGELAGLRQQvtsteekaaldkelmtqklvQAEREAQASLREQRAAHEEdlq 907
Cdd:PRK04863 313 ARELAELNEAESDLEQDYQA---ASDHLNLVQTALRQQ--------------------EKIERYQADLEELEERLEE--- 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 908 rlqhekeaawrelQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAeSEKQQALSLKESEKTALSe 987
Cdd:PRK04863 367 -------------QNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRA-IQYQQAVQALERAKQLCG- 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 988 klmgtrhsLAAISLEmerqkrDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEE-RTGNLGRQREACMRE 1066
Cdd:PRK04863 432 --------LPDLTAD------NAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQLvRKIAGEVSRSEAWDV 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1067 AeelrtqlrvledtrdglrRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEelrsavkkaeseRIS 1146
Cdd:PRK04863 498 A------------------RELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCK------------RLG 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1147 LKLANEDKEQKLALLEEARVSvakeagELRASLQEVERSRLEARRELQELRRQMKTLDSdngrLGRELADLQGRLA-LGE 1225
Cdd:PRK04863 548 KNLDDEDELEQLQEELEARLE------SLSESVSEARERRMALRQQLEQLQARIQRLAA----RAPAWLAAQDALArLRE 617
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1226 RT--EKESRREALGLRQRLLKGESSL-------EALKQELQGSQRKLQEQEAEFRARERGL 1277
Cdd:PRK04863 618 QSgeEFEDSQDVTEYMQQLLERERELtverdelAARKQALDEEIERLSQPGGSEDPRLNAL 678
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
441-1018 |
4.05e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 441 KRQLQVQDMRGRYEASQELLGSVRKQlsdseGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLT 520
Cdd:TIGR00618 257 KKQQLLKQLRARIEELRAQEAVLEET-----QERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRA 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 521 HSLQvtQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVR--- 597
Cdd:TIGR00618 332 AHVK--QQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQreq 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 598 -----EALSCAILQRDVLQTEKAEVAEaLTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKlelnrLIAQ 672
Cdd:TIGR00618 410 atidtRTSAFRDLQGQLAHAKKQQELQ-QRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKE-----QIHL 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 673 LEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSR 752
Cdd:TIGR00618 484 QETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKE 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 753 QLSGRDQELE-----------------------------------QALRESQRQVEALERAAREKEAMAKER---AGLAV 794
Cdd:TIGR00618 564 QMQEIQQSFSiltqcdnrskedipnlqnitvrlqdlteklseaedMLACEQHALLRKLQPEQDLQDVRLHLQqcsQELAL 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 795 KLAAAEREGRTLSEEAIR--LRLEKEALESSLFDVQRQLAQLEARREQLEAD------SQALLLAKETLTGELAGLRQQV 866
Cdd:TIGR00618 644 KLTALHALQLTLTQERVRehALSIRVLPKELLASRQLALQKMQSEKEQLTYWkemlaqCQTLLRELETHIEEYDREFNEI 723
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 867 TSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRlQHEKEAAWRELQAERAQLQGQLQQEREELlarmEAEK 946
Cdd:TIGR00618 724 ENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFN-NNEEVTAALQTGAELSHLAAEIQFFNRLR----EEDT 798
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568931104 947 EELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDR 1018
Cdd:TIGR00618 799 HLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAK 870
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
703-931 |
4.39e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 4.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 703 QLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQEL---EQALRESQRQVEALERAA 779
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELaalEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 780 REKEAMAKERAGLAVKLAAAEREGRTLSEE--------AIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLA 851
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEdfldavrrLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 852 KETLTGELAGLRQQVtstEEKAALDKELMTQKlvQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAER-AQLQGQ 930
Cdd:COG4942 180 LAELEEERAALEALK---AERQKLLARLEKEL--AELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGfAALKGK 254
|
.
gi 568931104 931 L 931
Cdd:COG4942 255 L 255
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1170-1576 |
5.68e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.23 E-value: 5.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1170 KEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKES--RREALGLRQRLLKGES 1247
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEalEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1248 SLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLE 1327
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1328 VELARVEAQRRVAEAQLGGLRSALRRGLGLGRVSSSPAREAPAGGSGDGLSSPSPLEYSPRSQPPSPGLIASPAPPDLDP 1407
Cdd:COG4717 234 NELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1408 EAVRDA-LRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQ----------LQKAVAESEEAWRSADRR 1476
Cdd:COG4717 314 EELEEEeLEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLeeleqeiaalLAEAGVEDEEELRAALEQ 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1477 LSGAQAELALQEESVRRSKRECRATLDQMAV-----LERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASE 1551
Cdd:COG4717 394 AEEYQELKEELEELEEQLEELLGELEELLEAldeeeLEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE 473
|
410 420
....*....|....*....|....*
gi 568931104 1552 SRSIKLELQRRALEGELQRSRLGLG 1576
Cdd:COG4717 474 LLQELEELKAELRELAEEWAALKLA 498
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
454-760 |
6.61e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 47.59 E-value: 6.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 454 EASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKEL 533
Cdd:COG4372 34 RKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEEL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 534 RQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAIL-------- 605
Cdd:COG4372 114 QEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALdellkean 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 606 QRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQ 685
Cdd:COG4372 194 RNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDT 273
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568931104 686 QAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQE 760
Cdd:COG4372 274 EEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1665-1917 |
7.66e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 7.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1665 DRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEgqlqqlqqalrqrqegeamalRSVQKLQEERR 1744
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA---------------------RRIRALEQELA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1745 LLQERLGSLQRALAQLEAEKRDLERSAlqfdKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQ 1824
Cdd:COG4942 80 ALEAELAELEKEIAELRAELEAQKEEL----AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1825 QQIQHLEAQVDVALEGNHNPVQPEAGEQQlELQQEVERLRSAQVQTERTLEARERAHRQRVSGLEEQVSTLKAQLHQELR 1904
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELE-EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
250
....*....|...
gi 568931104 1905 RSSASVSLPPGTP 1917
Cdd:COG4942 235 EAAAAAERTPAAG 247
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
726-1038 |
8.66e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 47.20 E-value: 8.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 726 REALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRT 805
Cdd:COG4372 19 RPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQ 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 806 LSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKLV 885
Cdd:COG4372 99 AQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSE 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 886 QAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLL 965
Cdd:COG4372 179 AEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILK 258
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568931104 966 LAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEA 1038
Cdd:COG4372 259 EIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELA 331
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
764-945 |
9.43e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.07 E-value: 9.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 764 ALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEA 843
Cdd:COG1579 1 AMPEDLRALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 844 DSQALLLAKE--TLTGELAGLRQQVTSTEEKAaldKELMTQklVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQ 921
Cdd:COG1579 81 QLGNVRNNKEyeALQKEIESLKRRISDLEDEI---LELMER--IEELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
170 180
....*....|....*....|....
gi 568931104 922 AERAqlqgQLQQEREELLARMEAE 945
Cdd:COG1579 156 AELE----ELEAEREELAAKIPPE 175
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
694-1117 |
1.37e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.26 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 694 AVEKQELLEQlRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLsgrdqeleQALRESQRQVE 773
Cdd:PRK04863 278 ANERRVHLEE-ALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL--------NLVQTALRQQE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 774 ALERAAREKEAM--AKERAGLAVKLAAAEREGRtlSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQAL--- 848
Cdd:PRK04863 349 KIERYQADLEELeeRLEEQNEVVEEADEQQEEN--EARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALera 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 849 --LLAKETLTGELAGLRQQVTSTEEKAALDKELMT-QKLVQAE----REAQASLREQRAAHE---EDLQRLQHEKEAAWR 918
Cdd:PRK04863 427 kqLCGLPDLTADNAEDWLEEFQAKEQEATEELLSLeQKLSVAQaahsQFEQAYQLVRKIAGEvsrSEAWDVARELLRRLR 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 919 ELQAERAQLQgQLQQEREELLARmeaekeelskeiaaLQQERDEGLLLAESEKQQALSL-KESEKTALSEKLMGTRHSLa 997
Cdd:PRK04863 507 EQRHLAEQLQ-QLRMRLSELEQR--------------LRQQQRAERLLAEFCKRLGKNLdDEDELEQLQEELEARLESL- 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 998 aislemERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAqTVKELEERTGnlgrqreacmreaEELRTQLRVl 1077
Cdd:PRK04863 571 ------SESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQD-ALARLREQSG-------------EEFEDSQDV- 629
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 568931104 1078 edtrDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLS 1117
Cdd:PRK04863 630 ----TEYMQQLLERERELTVERDELAARKQALDEEIERLS 665
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1020-1262 |
1.41e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1020 TLNALTSELRDLRAQLEEATAAHAQTVKELEErtgnLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQ 1099
Cdd:COG4942 14 AAAAQADAAAEAEAELEQLQQEIAELEKELAA----LKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1100 DSSEAHRQEASELRRSLSegakerealrrsnEELRSAVKKAESERISLKLANEDKEQ---KLALLEEARVSVAKEAGELR 1176
Cdd:COG4942 90 KEIAELRAELEAQKEELA-------------ELLRALYRLGRQPPLALLLSPEDFLDavrRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1177 ASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQEL 1256
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
....*.
gi 568931104 1257 QGSQRK 1262
Cdd:COG4942 237 AAAAER 242
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1396-1622 |
1.72e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.91 E-value: 1.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1396 LIASPAPPDLDPEAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADR 1475
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1476 RLSGAQAELALQEES----VRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASE 1551
Cdd:COG4942 91 EIAELRAELEAQKEElaelLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1552 SRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGALAKVEE 1622
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1458-1884 |
1.97e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 1.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1458 QLQKAVAESEEAwrSADRRLSGAQAELALQEESVRR---SKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEA 1534
Cdd:PRK02224 191 QLKAQIEEKEEK--DLHERLNGLESELAELDEEIERyeeQREQARETRDEADEVLEEHEERREELETLEAEIEDLRETIA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1535 KLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLS 1614
Cdd:PRK02224 269 ETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLR 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1615 GALAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKNLHLQKALSTCEH-------DRQVLQERLDAARQALSEARRQS 1687
Cdd:PRK02224 349 EDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRErfgdapvDLGNAEDFLEELREERDELRERE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1688 SSLGEQVQTLRGELASLELQRGDAEGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEaekrDL 1767
Cdd:PRK02224 429 AELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAE----DL 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1768 ERSALQFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEGNhnpvqp 1847
Cdd:PRK02224 505 VEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELN------ 578
|
410 420 430
....*....|....*....|....*....|....*..
gi 568931104 1848 eagEQQLELQQEVERLRSAQVQTERTLEARERAHRQR 1884
Cdd:PRK02224 579 ---SKLAELKERIESLERIRTLLAAIADAEDEIERLR 612
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
471-951 |
1.99e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 46.27 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 471 EGERRGLEEQLQRLRDQTAASAQAQeDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQ 550
Cdd:pfam05557 17 EKKQMELEHKRARIELEKKASALKR-QLDRESDRNQELQKRIRLLEKREAEAEEALREQAELNRLKKKYLEALNKKLNEK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 551 HNQLEDAQEDSV---QEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEA------L 621
Cdd:pfam05557 96 ESQLADAREVISclkNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAeqrikeL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 622 TKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKlELNRLIAQLEEEKVAL---LGRQQQA-EHATTMAVEK 697
Cdd:pfam05557 176 EFEIQSQEQDSEIVKNSKSELARIPELEKELERLREHNKHLN-ENIENKLLLKEEVEDLkrkLEREEKYrEEAATLELEK 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 698 QELLEQLRLEQEVErQGLQGSLCVAEQAR---EALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALR-------E 767
Cdd:pfam05557 255 EKLEQELQSWVKLA-QDTGLNLRSPEDLSrriEQLQQREIVLKEENSSLTSSARQLEKARRELEQELAQYLKkiedlnkK 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 768 SQRQVEALERAAREKEAMAKERAGLAVKLAAAEREgRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQA 847
Cdd:pfam05557 334 LKRHKALVRRLQRRVLLLTKERDGYRAILESYDKE-LTMSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGG 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 848 LLLAKETLTGELAGLRQQV------TSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQ-------RLQHEKE 914
Cdd:pfam05557 413 YKQQAQTLERELQALRQQEsladpsYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRCLQGdydpkktKVLHLSM 492
|
490 500 510
....*....|....*....|....*....|....*..
gi 568931104 915 AAWRELQAERAQLQGQLQQEREELLARMEAEKEELSK 951
Cdd:pfam05557 493 NPAAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQ 529
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
621-1062 |
2.50e-04 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 46.05 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 621 LTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKV-ALLGRQQQAEHATTMAVEKQE 699
Cdd:COG5278 78 LEPYEEARAEIDELLAELRSLTADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLeAALALVRSGEGKALMDEIRAR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 700 LLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAA 779
Cdd:COG5278 158 LLLLALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALELLAA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 780 REKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGEL 859
Cdd:COG5278 238 LALALALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAAAAA 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 860 AGLRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELL 939
Cdd:COG5278 318 AAAAAAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLAIAA 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 940 ARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRN 1019
Cdd:COG5278 398 AAAAAAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAALAAL 477
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 568931104 1020 TLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREA 1062
Cdd:COG5278 478 AAAAAALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAA 520
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1493-1840 |
2.60e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.21 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1493 RSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVldasesRSIKLELQRRALEGELQRSR 1572
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREY------EGYELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1573 LGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSgalakvEESEGNLRSKVQSLTDALTQSSASLSSTQDKN 1652
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLG------EEEQLRVKEKIGELEAEIASLERSIAEKEREL 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1653 LHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQLqqlqqalrqrqegeAMA 1732
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEF--------------AET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1733 LRSVQKLQEERRLLQERLGSLQR--------------ALAQLEAEKRDLERSALQFDKDRVALRKTLDKVEREKLRSHED 1798
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKReldrlqeelqrlseELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAAD 463
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 568931104 1799 TLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQVDVALEG 1840
Cdd:TIGR02169 464 LSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEER 505
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
884-1312 |
2.72e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.87 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 884 LVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREellarMEAEKEELSKEIAALQQERDEg 963
Cdd:pfam05483 262 LLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKA-----LEEDLQIATKTICQLTEEKEA- 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 964 lllaesekqqalSLKESEKTALSEKLMGTRhsLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHA 1043
Cdd:pfam05483 336 ------------QMEELNKAKAAHSFVVTE--FEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKN 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1044 QTVKELEERTGNLGrQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKER 1123
Cdd:pfam05483 402 NKEVELEELKKILA-EDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTEL 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1124 EALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMKtl 1203
Cdd:pfam05483 481 EKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFI-- 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1204 dsdngrlgRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRArergllgsLEE 1283
Cdd:pfam05483 559 --------QKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKA--------LKK 622
|
410 420 430
....*....|....*....|....*....|...
gi 568931104 1284 ARGAEKRLLDS----ARSLELRLEAVRAETSEL 1312
Cdd:pfam05483 623 KGSAENKQLNAyeikVNKLELELASAKQKFEEI 655
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1586-1705 |
2.89e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 45.34 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1586 QDRVDSLQRQVAD-------SEVKAGTLQLTVERLSGALAKVEesegNLRSKVQSLTDALTQSSASLsstqdknlhlqka 1658
Cdd:PRK09039 52 DSALDRLNSQIAEladllslERQGNQDLQDSVANLRASLSAAE----AERSRLQALLAELAGAGAAA------------- 114
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568931104 1659 lstcEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLE 1705
Cdd:PRK09039 115 ----EGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALE 157
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1107-1617 |
3.50e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 3.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1107 QEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERislklanedkeQKLALLEEARVSVAKEAGELRASLQEVERSR 1186
Cdd:PRK03918 200 KELEEVLREINEISSELPELREELEKLEKEVKELEELK-----------EEIEELEKELESLEGSKRKLEEKIRELEERI 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1187 LEARRELQELRRQMKtldsdngrlgrELADLQGRLALGERTEKESRRealgLRQRLLKGESSLEALKQELQGSQRKLQEQ 1266
Cdd:PRK03918 269 EELKKEIEELEEKVK-----------ELKELKEKAEEYIKLSEFYEE----YLDELREIEKRLSRLEEEINGIEERIKEL 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1267 EA------EFRARERGLLGSLEEARGAEKrLLDSARSLELRLEAVRAETSELGL-----RLSAAEGRAQGLEVELARVEA 1335
Cdd:PRK03918 334 EEkeerleELKKKLKELEKRLEELEERHE-LYEEAKAKKEELERLKKRLTGLTPeklekELEELEKAKEEIEEEISKITA 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1336 QRRVAEAQLGGLRSALRRGLGLGRVSSSPAREapaggsgdglsspspleysprsqppspgliaspappdLDPEAVRDALR 1415
Cdd:PRK03918 413 RIGELKKEIKELKKAIEELKKAKGKCPVCGRE-------------------------------------LTEEHRKELLE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1416 DFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAvaeseEAWRSADRRLSGaqaelaLQEESVRRSK 1495
Cdd:PRK03918 456 EYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA-----EQLKELEEKLKK------YNLEELEKKA 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1496 RECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRSIK----LELQRRALEgELQRS 1571
Cdd:PRK03918 525 EEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFEsveeLEERLKELE-PFYNE 603
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 568931104 1572 RLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTVERLSGAL 1617
Cdd:PRK03918 604 YLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
1196-1343 |
4.17e-04 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 44.57 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1196 LRRQMKTLDSDNGRLGRELADLQGRLALgERTEKESRREALGlrqRLLKGESSLEALKQELQGSQRKLQEQEAEFRARER 1275
Cdd:PRK09039 44 LSREISGKDSALDRLNSQIAELADLLSL-ERQGNQDLQDSVA---NLRASLSAAEAERSRLQALLAELAGAGAAAEGRAG 119
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 1276 GLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQ 1343
Cdd:PRK09039 120 ELAQELDSEKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRDRESQAKIADLGRRLNVALAQ 187
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
613-1712 |
4.88e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 613 EKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSL-------SKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQ 685
Cdd:pfam01576 13 ELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLqaetelcAEAEEMRARLAARKQELEEILHELESRLEEEEERSQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 686 QAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSgrdqELEQAL 765
Cdd:pfam01576 93 QLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERIS----EFTSNL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 766 RESQRQVEALERAAREKEAMAkeraglavklaaAEREGRTLSEEAIRLRLEK--EALESSLFDVQRQLAQLEARREQLEA 843
Cdd:pfam01576 169 AEEEEKAKSLSKLKNKHEAMI------------SDLEERLKKEEKGRQELEKakRKLEGESTDLQEQIAELQAQIAELRA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 844 dsqALLLAKETLTGELAGLRQQVTSTEEKAALDKELMTQKL-----VQAEREAQASLREQRAAHEEDLQRLQHEKE---- 914
Cdd:pfam01576 237 ---QLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISelqedLESERAARNKAEKQRRDLGEELEALKTELEdtld 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 915 --AAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEkLMGT 992
Cdd:pfam01576 314 ttAAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAE-LQAE 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 993 RHSLAAISLEMERQKRDAQS-------------RQEQDRN-TLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGR 1058
Cdd:pfam01576 393 LRTLQQAKQDSEHKRKKLEGqlqelqarlseseRQRAELAeKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQD 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1059 QREACMREAEE---LRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALrrsnEELRs 1135
Cdd:pfam01576 473 TQELLQEETRQklnLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEAL----EEGK- 547
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1136 avKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEvERSRLEArreLQELRRQMKTLDSDNGRLGRELA 1215
Cdd:pfam01576 548 --KRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDH-QRQLVSN---LEKKQKKFDQMLAEEKAISARYA 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1216 DLQGRlALGERTEKESRreALGLRQRLlkgesslealkQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSA 1295
Cdd:pfam01576 622 EERDR-AEAEAREKETR--ALSLARAL-----------EEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSK 687
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1296 RSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLglgrvssspareapaggsgd 1375
Cdd:pfam01576 688 RALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQL-------------------- 747
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1376 glsspspleysprsqppspgliaspappdldpeavRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDhAASR 1455
Cdd:pfam01576 748 -----------------------------------VKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQID-AANK 791
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1456 A-----KQLQKAVAESEEAWRSADRRLSGAQAELALQEESvrrskrecratldqmavlERSLQATESELRASQEKVSKMK 1530
Cdd:pfam01576 792 GreeavKQLKKLQAQMKDLQRELEEARASRDEILAQSKES------------------EKKLKNLEAELLQLQEDLAASE 853
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1531 ATEAKLESDKRRLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADSEVKAGTLQLTV 1610
Cdd:pfam01576 854 RARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTS 933
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1611 ERLSGALAKVEESEGNLRSKVQSLTDAL-TQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALSEA------ 1683
Cdd:pfam01576 934 QKSESARQQLERQNKELKAKLQEMEGTVkSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKKLKEVllqved 1013
|
1130 1140 1150
....*....|....*....|....*....|
gi 568931104 1684 -RRQSSSLGEQVQTLRGELASLELQRGDAE 1712
Cdd:pfam01576 1014 eRRHADQYKDQAEKGNSRMKQLKRQLEEAE 1043
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
479-905 |
5.08e-04 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 44.90 E-value: 5.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 479 EQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQ 558
Cdd:COG5278 104 EQQARLDELEALIDQWLAELEQVIALRRAGGLEAALALVRSGEGKALMDEIRARLLLLALALAALLLAAAALLLLLLALA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 559 EDSVQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKL 638
Cdd:COG5278 184 ALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALELLAALALALALLLAALLLALLAALALAALL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 639 RAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGS 718
Cdd:COG5278 264 AAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAAAAAAAAAAAALAALLALALATALAAAAAA 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 719 LCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAA 798
Cdd:COG5278 344 LALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLAIAAAAAAAAAEAAAAAAAAAAASAAEALE 423
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 799 AEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALDKE 878
Cdd:COG5278 424 LAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAALAALAAAAAALAEAEAAAALAAAAALSLAL 503
|
410 420
....*....|....*....|....*..
gi 568931104 879 LMTQKLVQAEREAQASLREQRAAHEED 905
Cdd:COG5278 504 ALAALLLAAAEAALAAALAAALASAEL 530
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
445-634 |
5.98e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 5.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 445 QVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELL----SREKGNLT 520
Cdd:COG4942 56 QLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLAlllsPEDFLDAV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 521 HSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQedsvQEGARARRELERSHRQLEQLEVKRSGLTKELVEVREAL 600
Cdd:COG4942 136 RRLQYLKYLAPARREQAEELRADLAELAALRAELEAER----AELEALLAELEEERAALEALKAERQKLLARLEKELAEL 211
|
170 180 190
....*....|....*....|....*....|....
gi 568931104 601 SCAILQRDVLQTEKAEVAEALTKAEAGRAQLELS 634
Cdd:COG4942 212 AAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
671-1195 |
6.94e-04 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 44.82 E-value: 6.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 671 AQLEEEKVALLGRQQQAEHATTMAVEKQELLeqLRLEQEVERQgLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQL 750
Cdd:NF041483 183 ARAEAERLAEEARQRLGSEAESARAEAEAIL--RRARKDAERL-LNAASTQAQEATDHAEQLRSSTAAESDQARRQAAEL 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 751 SRQLSGRDQELEQALRESQRQVEALEraarekeAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSlfdvqrq 830
Cdd:NF041483 260 SRAAEQRMQEAEEALREARAEAEKVV-------AEAKEAAAKQLASAESANEQRTRTAKEEIARLVGEATKEA------- 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 831 lAQLEARREQLEADSQAlllAKETLTGELAGLRQQVTSTEEKAALDKELMTQK--LVQAEREAQASLReqraAHEEDLQR 908
Cdd:NF041483 326 -EALKAEAEQALADARA---EAEKLVAEAAEKARTVAAEDTAAQLAKAARTAEevLTKASEDAKATTR----AAAEEAER 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 909 LQHEKEAAWRELQAERA----QLQGQLQQEREELLARMEAEKEELSKEIAALQQERDEGL-----LLAESEKQQALSLKE 979
Cdd:NF041483 398 IRREAEAEADRLRGEAAdqaeQLKGAAKDDTKEYRAKTVELQEEARRLRGEAEQLRAEAVaegerIRGEARREAVQQIEE 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 980 SEKTA---LSEKLMGTRHSLAAISLEMERQKRDAQSR----QEQDRNTLNALTSELRDLRAQLEE-ATAAHAQTVKELEE 1051
Cdd:NF041483 478 AARTAeelLTKAKADADELRSTATAESERVRTEAIERattlRRQAEETLERTRAEAERLRAEAEEqAEEVRAAAERAARE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1052 RTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELL-----EAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREAL 1126
Cdd:NF041483 558 LREETERAIAARQAEAAEELTRLHTEAEERLTAAEEALadaraEAERIRREAAEETERLRTEAAERIRTLQAQAEQEAER 637
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 1127 RRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQE 1195
Cdd:NF041483 638 LRTEAAADASAARAEGENVAVRLRSEAAAEAERLKSEAQESADRVRAEAAAAAERVGTEAAEALAAAQE 706
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
110-824 |
7.54e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 44.72 E-value: 7.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 110 AIKYNAVNERDTEHSQDLDSALLRLEEEQQRSASLAQVNAMLREQLDQANLANQALSEDIRKVTSDWTRSCKELEQREAV 189
Cdd:pfam15921 249 ALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQ 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 190 WRRE-EESFNTYfsseHSRLLRLWRQVMGLRRQASEVKmgTERDllQLGGELVRTSRAVQELglglSASLHRAESKAEAA 268
Cdd:pfam15921 329 LRSElREAKRMY----EDKIEELEKQLVLANSELTEAR--TERD--QFSQESGNLDDQLQKL----LADLHKREKELSLE 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 269 LEKQKLL--QAQLEEQLQAKLLREKDLAQLQVQ--SDLDKADLSARVTELALSVEHLQNQNSEKDQVNrTLSDKLEALES 344
Cdd:pfam15921 397 KEQNKRLwdRDTGNSITIDHLRRELDDRNMEVQrlEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKE 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 345 L--RLQEQTTLDTEDGEGLQQTLRDLAqAALSDTESGVQLSSSERTADTSDGSLRGFSGQRTPTPPRHSPgRGRSPRRGL 422
Cdd:pfam15921 476 MlrKVVEELTAKKMTLESSERTVSDLT-ASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLR-NVQTECEAL 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 423 SPACSDSSTLTLIHSALHKRQLQVQDMRGRYEASQELlgsVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQE----DA 498
Cdd:pfam15921 554 KLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQV---EKAQLEKEINDRRLELQEFKILKDKKDAKIRELEarvsDL 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 499 QREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQ----EGARARRELER 574
Cdd:pfam15921 631 ELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNklkmQLKSAQSELEQ 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 575 SHRQLEQLEVKRSGLTKELVEVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSA 654
Cdd:pfam15921 711 TRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAG 790
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 655 LNESLAQDKLELNRLIAQLEeekVALlgrqqqaEHATTMAVEKQELLEqlRLEQEVERQGLQGSLCVAE------QAREA 728
Cdd:pfam15921 791 ELEVLRSQERRLKEKVANME---VAL-------DKASLQFAECQDIIQ--RQEQESVRLKLQHTLDVKElqgpgyTSNSS 858
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 729 LEQQILVLRS-ERSHLQEQLAQLSRQLSGRDQELEQALRESqrQVEALERAAREKEAMAKERAglAVKLAAAEREGRTLS 807
Cdd:pfam15921 859 MKPRLLQPASfTRTHSNVPSSQSTASFLSHHSRKTNALKED--PTRDLKQLLQELRSVINEEP--TVQLSKAEDKGRAPS 934
|
730
....*....|....*..
gi 568931104 808 EEAIRLRLEKEALESSL 824
Cdd:pfam15921 935 LGALDDRVRDCIIESSL 951
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
764-1060 |
7.91e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.83 E-value: 7.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 764 ALRESQRQVEALERAAREKEAMAKeraglavklAAAEREgrtlSEEAIRLRLEKEAlesslfdvQRQLAQLEARREQLEA 843
Cdd:NF012221 1536 ATSESSQQADAVSKHAKQDDAAQN---------ALADKE----RAEADRQRLEQEK--------QQQLAAISGSQSQLES 1594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 844 DSQALLlaketltgELAGLRQQVTSTEEKAALDKEL--MTQKLVQAEREAQAS------LREQRAahEEDLQRLQHE--- 912
Cdd:NF012221 1595 TDQNAL--------ETNGQAQRDAILEESRAVTKELttLAQGLDALDSQATYAgesgdqWRNPFA--GGLLDRVQEQldd 1664
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 913 -KEAAWRELQAERAQLQGQLQQEREElLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKlmg 991
Cdd:NF012221 1665 aKKISGKQLADAKQRHVDNQQKVKDA-VAKSEAGVAQGEQNQANAEQDIDDAKADAEKRKDDALAKQNEAQQAESDA--- 1740
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 992 trHSLAaislemerqkRDAQSRQEQDrntlnALTSELRDLRAQleeataAHAQTVKELEERTGNlgRQR 1060
Cdd:NF012221 1741 --NAAA----------NDAQSRGEQD-----ASAAENKANQAQ------ADAKGAKQDESDKPN--RQG 1784
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1475-1912 |
8.38e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 44.44 E-value: 8.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1475 RRLSGAQAELALQEESVRRSKRECRATLDQM----------AVLERSLQATESELRASQEKVSKMKAT-EAKLESDKR-- 1541
Cdd:pfam12128 390 RDIAGIKDKLAKIREARDRQLAVAEDDLQALeselreqleaGKLEFNEEEYRLKSRLGELKLRLNQATaTPELLLQLEnf 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1542 -----RLKEVLDASESRSIKLELQRRALEGELQRSRLGLGDREAHAQALQDRVDSLQRQVADsevKAGTLqltVERLSGA 1616
Cdd:pfam12128 470 derieRAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFP---QAGTL---LHFLRKE 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1617 LAKVEESEGNLRSKVQSLTDALTQSSASLSSTQDKN-----LHLQKALSTCEHD-RQVLQERLDAARQALSEARRQSSSL 1690
Cdd:pfam12128 544 APDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNlygvkLDLKRIDVPEWAAsEEELRERLDKAEEALQSAREKQAAA 623
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1691 GEQVQTLRGELASLELQRGDA-EGQLQQLQQALRQRQEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRD-LE 1768
Cdd:pfam12128 624 EEQLVQANGELEKASREETFArTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAwLE 703
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1769 RSALQFDKDRVALRKTLDKVEREKlrshedtlrlNAERGRLDRTLTGAELDLAEAQQQIQHlEAQVDVALEGNHNPVQPE 1848
Cdd:pfam12128 704 EQKEQKREARTEKQAYWQVVEGAL----------DAQLALLKAAIAARRSGAKAELKALET-WYKRDLASLGVDPDVIAK 772
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568931104 1849 AGEQQLELQQEVERL---RSAQVQTERTLEARERAHRQRVSGLEEQVSTLKAQLHQELRRSSASVSL 1912
Cdd:pfam12128 773 LKREIRTLERKIERIavrRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKL 839
|
|
| COG5281 |
COG5281 |
Phage-related minor tail protein [Mobilome: prophages, transposons]; |
937-1363 |
8.88e-04 |
|
Phage-related minor tail protein [Mobilome: prophages, transposons];
Pssm-ID: 444092 [Multi-domain] Cd Length: 603 Bit Score: 44.22 E-value: 8.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 937 ELLARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQ 1016
Cdd:COG5281 2 AALAAAAALAAAAAAAAASAAAAAAAAALAAAAAAAAAAAGLAAAAAAAAAASLAAAAAAAALAAAAAAAAAAAAADALA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1017 DRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREAcMREAEELRTQLRVLEDTRDGLRRELLEAQRKGR 1096
Cdd:COG5281 82 AALAEDAAAAAAAAEAALAALAAAALALAAAALAEAALAAAAAAAA-AAAAAAAAAAAAAAAAAEAAKAAAAAAAAAALA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1097 DSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARvSVAKEAGELR 1176
Cdd:COG5281 161 AAAAAAAAAAAAAAAAAALAAASAAAAAAAAKAAAEAAAEAAAAAEAAAAAAAAAAEAAAAEAQALAAA-ALAEQAALAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1177 ASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQEL 1256
Cdd:COG5281 240 ASAAAQALAALAAAAAAAALALAAAAELALTAQAEAAAAAAAAAAAAAQAAEAAAAAAEAQALAAAAAAAAAQLAAAAAA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1257 QGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGL----EVELAR 1332
Cdd:COG5281 320 AAQALRAAAQALAALAQRALAAAALAAAAQEAALAAAAAALQAALEAAAAAAAAELAAAGDWAAGAKAALaeyaDSATNV 399
|
410 420 430
....*....|....*....|....*....|.
gi 568931104 1333 VEAQRRVAEAQLGGLRSALRRGLGLGRVSSS 1363
Cdd:COG5281 400 AAQVAQAATSAFSGLTDALAGAVTTGKLLFD 430
|
|
| CHASE3 |
COG5278 |
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms]; |
882-1330 |
9.80e-04 |
|
Extracytoplasmic sensor domain CHASE3 (specificity unknown) [Signal transduction mechanisms];
Pssm-ID: 444089 [Multi-domain] Cd Length: 530 Bit Score: 44.13 E-value: 9.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 882 QKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERD 961
Cdd:COG5278 82 EEARAEIDELLAELRSLTADNPEQQARLDELEALIDQWLAELEQVIALRRAGGLEAALALVRSGEGKALMDEIRARLLLL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 962 EGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAA 1041
Cdd:COG5278 162 ALALAALLLAAAALLLLLLALAALLALAELLLLALARALAALLLLLLLEAELAAAAALLAAAAALAALAALELLAALALA 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1042 HAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAK 1121
Cdd:COG5278 242 LALLLAALLLALLAALALAALLAAALLALAALLLALAAAAALAAAAALELAAAEALALAELELELLLAAAAAAAAAAAAA 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1122 EREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMK 1201
Cdd:COG5278 322 AAALAALLALALATALAAAAAALALLAALLAEAAAAAAEEAEAAAEAAAAALAGLAEVEAEGAAEAVELEVLAIAAAAAA 401
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1202 TLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSL 1281
Cdd:COG5278 402 AAAEAAAAAAAAAAASAAEALELAEALAEALALAEEEALALAAASSELAEAGAALALAAAEALAEELAAVAALAALAAAA 481
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 568931104 1282 EEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVEL 1330
Cdd:COG5278 482 AALAEAEAAAALAAAAALSLALALAALLLAAAEAALAAALAAALASAEL 530
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1021-1144 |
1.03e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.08 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1021 LNALTSELRDLRAQLEEATAAHAQT-VKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQ 1099
Cdd:COG2433 382 LEELIEKELPEEEPEAEREKEHEEReLTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLERELSEARSEERREI 461
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 568931104 1100 DSS---EAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESER 1144
Cdd:COG2433 462 RKDreiSRLDREIERLERELEEERERIEELKRKLERLKELWKLEHSGE 509
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
940-1291 |
1.07e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 940 ARMEAEKEELSKEIAALQQERDEGLLLAESEKQQALSL-KESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDR 1018
Cdd:PRK04863 275 MRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMaRELAELNEAESDLEQDYQAASDHLNLVQTALRQQEKIERYQ 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1019 NTLNALTselrdlrAQLEEATAAhaqtVKELEErtgnlgrqreacmrEAEELRTQLRVLEDTRDGLRRELLEAQRKGRDS 1098
Cdd:PRK04863 355 ADLEELE-------ERLEEQNEV----VEEADE--------------QQEENEARAEAAEEEVDELKSQLADYQQALDVQ 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1099 QDSSEAHRQEASELRRSlsEGAKEREALRRSNEELRSAVKKAESERISLKLanEDKEQKLALLEEARVSVAKEAGELRAS 1178
Cdd:PRK04863 410 QTRAIQYQQAVQALERA--KQLCGLPDLTADNAEDWLEEFQAKEQEATEEL--LSLEQKLSVAQAAHSQFEQAYQLVRKI 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1179 LQEVERSRL-EARRELQELRRQMKTLDSDNGRLGRELADLQGRLALgERTEKESRREALGLRQRLLKGESSLEALKQELQ 1257
Cdd:PRK04863 486 AGEVSRSEAwDVARELLRRLREQRHLAEQLQQLRMRLSELEQRLRQ-QQRAERLLAEFCKRLGKNLDDEDELEQLQEELE 564
|
330 340 350
....*....|....*....|....*....|....
gi 568931104 1258 GSQRKLQEQEAEFRARERGLLGSLEEARGAEKRL 1291
Cdd:PRK04863 565 ARLESLSESVSEARERRMALRQQLEQLQARIQRL 598
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1020-1526 |
1.26e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1020 TLNALTSELRDLRAQLE--EATAAHAQTVKELEERTGNLGRQREAcmREAEELRTQLRVLEDTRDGLRRELLEAQRKGRD 1097
Cdd:COG4913 236 DLERAHEALEDAREQIEllEPIRELAERYAAARERLAELEYLRAA--LRLWFAQRRLELLEAELEELRAELARLEAELER 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1098 SQDSSEAHRQEASELRRSLSE-GAKEREALRRSNEELRSAVKKAESER-------ISLKLANEDKEQKLALLEEARVSVA 1169
Cdd:COG4913 314 LEARLDALREELDELEAQIRGnGGDRLEQLEREIERLERELEERERRRarleallAALGLPLPASAEEFAALRAEAAALL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1170 KEAGELRASLQ----EVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLA------------LGE----RTEK 1229
Cdd:COG4913 394 EALEEELEALEealaEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAealgldeaelpfVGElievRPEE 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1230 ESRREAL-----GLRQRLL------------------KGESSLEALKQELQGSQR----------KLQEQEAEFRARERG 1276
Cdd:COG4913 474 ERWRGAIervlgGFALTLLvppehyaaalrwvnrlhlRGRLVYERVRTGLPDPERprldpdslagKLDFKPHPFRAWLEA 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1277 LLG---------SLEEARGAEKRLL------DSARSLELRLEAVRAETSELGL----RLSAAEGRAQGLEVELARVEAQR 1337
Cdd:COG4913 554 ELGrrfdyvcvdSPEELRRHPRAITragqvkGNGTRHEKDDRRRIRSRYVLGFdnraKLAALEAELAELEEELAEAEERL 633
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1338 RVAEAQLGGLRSALRRGLGLGRVSSSPAREAPAggsgdglsspspleysprsqppspgliaspappdldpEAVRDALRDF 1417
Cdd:COG4913 634 EALEAELDALQERREALQRLAEYSWDEIDVASA-------------------------------------EREIAELEAE 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1418 LQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSADRRLSGAQAELALQE----ESVRR 1493
Cdd:COG4913 677 LERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELrallEERFA 756
|
570 580 590
....*....|....*....|....*....|...
gi 568931104 1494 SKRECRATLDQMAVLERSLQATESELRASQEKV 1526
Cdd:COG4913 757 AALGDAVERELRENLEERIDALRARLNRAEEEL 789
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
527-846 |
1.48e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.57 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 527 QQQAKELRQELEKLQAAQEEL------KRQHNQLEDAQEDSVQEGARARRELER--SHRQLEQLEVKRSGLTKELVEVRE 598
Cdd:pfam17380 288 QQQEKFEKMEQERLRQEKEEKareverRRKLEEAEKARQAEMDRQAAIYAEQERmaMERERELERIRQEERKRELERIRQ 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 599 AlSCAILQRDVLQTEKAEVaEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKV 678
Cdd:pfam17380 368 E-EIAMEISRMRELERLQM-ERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEERA 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 679 ALLGRQQQAEhattmaVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRD 758
Cdd:pfam17380 446 REMERVRLEE------QERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLE 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 759 QELEQ---ALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREgrtlseeairlRLEKEALESSLFdvqRQLAQLE 835
Cdd:pfam17380 520 KEMEErqkAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERS-----------RLEAMEREREMM---RQIVESE 585
|
330
....*....|.
gi 568931104 836 ARREQLEADSQ 846
Cdd:pfam17380 586 KARAEYEATTP 596
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
606-847 |
1.70e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 606 QRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQ 685
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 686 QaehattmavEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILvlrsershlqeqLAQLSRQLSGRDQELEQAL 765
Cdd:COG4942 101 A---------QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQY------------LKYLAPARREQAEELRADL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 766 RESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEeaiRLRLEKEALESSLFDVQRQLAQLEARREQLEADS 845
Cdd:COG4942 160 AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLA---RLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
..
gi 568931104 846 QA 847
Cdd:COG4942 237 AA 238
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
439-743 |
1.80e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.97 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 439 LHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANELLSREKGN 518
Cdd:COG4372 61 LEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 519 LTHSLQVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQE----DSVQEGARARRELERSHRQLEQLEVKRSGLTKELV 594
Cdd:COG4372 141 LQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAeqalDELLKEANRNAEKEEELAEAEKLIESLPRELAEEL 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 595 EVREALSCAILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLE 674
Cdd:COG4372 221 LEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLAL 300
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 675 EEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHL 743
Cdd:COG4372 301 LLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVAD 369
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
640-974 |
1.95e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 640 AEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGRQQQAEHATTMAVEKQELLEQLRLEQEVERQGL---Q 716
Cdd:COG4372 28 ALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELeslQ 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 717 GSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKL 796
Cdd:COG4372 108 EEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 797 AAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQLEADSQALLLAKETLTGELAGLRQQVTSTEEKAALD 876
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 877 KELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAAL 956
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|....*...
gi 568931104 957 QQERDEGLLLAESEKQQA 974
Cdd:COG4372 348 VGLLDNDVLELLSKGAEA 365
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
763-867 |
2.10e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.15 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 763 QALRESQRQVEALERaarEKEAMAKER-AGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEARREQL 841
Cdd:COG0542 411 EELDELERRLEQLEI---EKEALKKEQdEASFERLAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRYGKI 487
|
90 100
....*....|....*....|....*.
gi 568931104 842 EADSQALLLAKETLTGELAGLRQQVT 867
Cdd:COG0542 488 PELEKELAELEEELAELAPLLREEVT 513
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
524-851 |
2.38e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 42.58 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 524 QVTQQQAKELRQELEKLQAAQEELKRQHNQLEDAQEdsvqEGARARRELERSHRQLEQLEVKRSGLTKELVEVREALSCA 603
Cdd:COG4372 24 ILIAALSEQLRKALFELDKLQEELEQLREELEQARE----ELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQA 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 604 ILQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKMSALNESLAQDKLELNRLIAQLEEEKVALLGR 683
Cdd:COG4372 100 QEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 684 QQQAE------HATTMAVEKQELLEQLRLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQEQLAQLSRQLSGR 757
Cdd:COG4372 180 EAEQAldellkEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKE 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 758 DQELEQALRESQRQVEALERAAREKEAMAKERAGLAVKLAAAEREGRTLSEEAIRLRLEKEALESSLFDVQRQLAQLEAR 837
Cdd:COG4372 260 IEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAEL 339
|
330
....*....|....
gi 568931104 838 REQLEADSQALLLA 851
Cdd:COG4372 340 ADLLQLLLVGLLDN 353
|
|
| PstA |
COG4985 |
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and ... |
679-758 |
2.60e-03 |
|
ABC-type phosphate transport system, auxiliary component PstA [Inorganic ion transport and metabolism];
Pssm-ID: 444009 [Multi-domain] Cd Length: 545 Bit Score: 42.60 E-value: 2.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 679 ALLGRQQQAE--HATTMAVEKQEL------LEQLRLEQevERQGLQGSLCVAEQAReaLEQQILVLRSERSHLQEQLAQL 750
Cdd:COG4985 159 ELQQRLERALelRDQIDDIEKGDIgainyqLERLRLKE--RRLELDGQLDDEAQAD--IEAERAELEAEYAVLEQQLDAL 234
|
....*...
gi 568931104 751 sRQLSGRD 758
Cdd:COG4985 235 -RQQINRD 241
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1395-1822 |
2.69e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1395 GLIASPAPPDLDPEAVRDALRDFLQELRSAQRERDELKVQTSTLSQQLVEMEAERDHAASRAKQLQKAVAESEEAWRSAD 1474
Cdd:PRK02224 297 DLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAR 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1475 RRLSGAQAELALQEESVRRSKRECRATLDQMAVLERSLQATESELRASQEKVSKMKATEAKLESDKRRLKEVLDASESRS 1554
Cdd:PRK02224 377 EAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPE 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1555 IKLELQRRALEGELQRSRlglgdreahaqalqDRVDSLQRQVADSEVKAGTLQLTVERLSgALAKVEESEGNLRSKVQSL 1634
Cdd:PRK02224 457 CGQPVEGSPHVETIEEDR--------------ERVEELEAELEDLEEEVEEVEERLERAE-DLVEAEDRIERLEERREDL 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1635 TDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGDAEGQ 1714
Cdd:PRK02224 522 EELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAI 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1715 LQQLQQALRQRQEGEAMAlrsvqKLQEERRllqERLGSLQRALAQLEAEKRDLERSALQFDKDRVAlrKTLDKVErEKLR 1794
Cdd:PRK02224 602 ADAEDEIERLREKREALA-----ELNDERR---ERLAEKRERKRELEAEFDEARIEEAREDKERAE--EYLEQVE-EKLD 670
|
410 420
....*....|....*....|....*...
gi 568931104 1795 shedtlRLNAERGRLDRTLTGAELDLAE 1822
Cdd:PRK02224 671 ------ELREERDDLQAEIGAVENELEE 692
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
1066-1275 |
2.76e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.73 E-value: 2.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1066 EAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKkaeseRI 1145
Cdd:PRK10929 24 DEKQITQELEQAKAAKTPAQAEIVEALQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPR-----SV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1146 SLKLANEDKEQKL-----ALLEEARVSVAKE--AGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGR-ELADL 1217
Cdd:PRK10929 99 PPNMSTDALEQEIlqvssQLLEKSRQAQQEQdrAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQaQLTAL 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 1218 QGRLALGERTEKE---------SRREALGLRQRLLKGESS-LEALKQELQGSQRKLQEQEAEfRARER 1275
Cdd:PRK10929 179 QAESAALKALVDElelaqlsanNRQELARLRSELAKKRSQqLDAYLQALRNQLNSQRQREAE-RALES 245
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
931-1338 |
2.91e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.50 E-value: 2.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 931 LQQEREELLARMEAEKEELSKEIAALQQERDEGLLLAE--SEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKR 1008
Cdd:pfam10174 343 LQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGeiRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKE 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1009 DAQSRQEQDRNTLNALTSelrdlraqLEEATAAHAQTVKELEERTGNLGRQReacMREAEELRTQLRVLEDTRDGLRREL 1088
Cdd:pfam10174 423 RVKSLQTDSSNTDTALTT--------LEEALSEKERIIERLKEQREREDRER---LEELESLKKENKDLKEKVSALQPEL 491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1089 LEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKlANEDKEQKLALLEearvsv 1168
Cdd:pfam10174 492 TEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVR-TNPEINDRIRLLE------ 564
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1169 akeagelraslQEVERSRLEARRELQELRRQMKTLdsdngrlgreladlqgRLALGERTEKESRREAL-GLRQRLLKGES 1247
Cdd:pfam10174 565 -----------QEVARYKEESGKAQAEVERLLGIL----------------REVENEKNDKDKKIAELeSLTLRQMKEQN 617
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1248 SLEALKQELQGSQRKLQEQEaefrarergllgsLEEARGAEKRLLDSARSLELR-----LEAVRAETSELGLRLSAAEGR 1322
Cdd:pfam10174 618 KKVANIKHGQQEMKKKGAQL-------------LEEARRREDNLADNSQQLQLEelmgaLEKTRQELDATKARLSSTQQS 684
|
410
....*....|....*.
gi 568931104 1323 AQGLEVELARVEAQRR 1338
Cdd:pfam10174 685 LAEKDGHLTNLRAERR 700
|
|
| PRK10920 |
PRK10920 |
putative uroporphyrinogen III C-methyltransferase; Provisional |
731-798 |
3.04e-03 |
|
putative uroporphyrinogen III C-methyltransferase; Provisional
Pssm-ID: 236795 Cd Length: 390 Bit Score: 42.01 E-value: 3.04e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568931104 731 QQILVLRSERSHLQEQLAQLSRQLSGRDQELEQALresQRQVEALERAAREKEAMAKERAGLAVKLAA 798
Cdd:PRK10920 60 QQAQNQTATNDALANQLTALQKAQESQKQELEGIL---KQQAKALDQANRQQAALAKQLDELQQKVAT 124
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
462-754 |
3.23e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.31 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 462 SVRKQLSDSEGERRGLEEQLQRLRDQTaasaqaqEDAQREAQRLRSANELLSREKGNLTHSLQVTQQQAKELRQELEKLQ 541
Cdd:TIGR04523 346 QLKKELTNSESENSEKQRELEEKQNEI-------EKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQ 418
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 542 AAQEELKRQH-------------------------------NQLEDAQEDSVQEGAR----ARRELERSHRQLEQLEVKR 586
Cdd:TIGR04523 419 QEKELLEKEIerlketiiknnseikdltnqdsvkeliiknlDNTRESLETQLKVLSRsinkIKQNLEQKQKELKSKEKEL 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 587 SGLTKELVEVREalscailQRDVLQTEKAEVAEALTKAEAGRAQLELSLTKLRAEEASLRDSLSKmsalnESLAQDKLEL 666
Cdd:TIGR04523 499 KKLNEEKKELEE-------KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK-----ENLEKEIDEK 566
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 667 NRLIAQLEEEKVALLGRQQQA-EHATTMAVEKQELLEQLrLEQEVERQGLQGSLCVAEQAREALEQQILVLRSERSHLQE 745
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKqELIDQKEKEKKDLIKEI-EEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
....*....
gi 568931104 746 QLAQLSRQL 754
Cdd:TIGR04523 646 EVKQIKETI 654
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
743-1011 |
3.31e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 743 LQEQLAQLSRQLSGRDQELEQALRESQRQVEALERAAREkeamAKERAGLAvklaaaeregrTLSEEAIRLRLEKEALES 822
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEE----FRQKNGLV-----------DLSEEAKLLLQQLSELES 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 823 SLFDVQRQLAQLEARREQLEadsqalllaketltgelaglRQQVTSTEEKAALDKELMTQKLVQAEREAQASLREQRAAH 902
Cdd:COG3206 227 QLAEARAELAEAEARLAALR--------------------AQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 903 EEDLQRLQhekeaawrELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERD--EGLLLAESEKQQALSLKES 980
Cdd:COG3206 287 TPNHPDVI--------ALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAqlEARLAELPELEAELRRLER 358
|
250 260 270
....*....|....*....|....*....|.
gi 568931104 981 EKTALSEKLMGTRHSLAAISLEMERQKRDAQ 1011
Cdd:COG3206 359 EVEVARELYESLLQRLEEARLAEALTVGNVR 389
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
730-1121 |
3.96e-03 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 41.97 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 730 EQQILVLRSERSHLQEQLAQLSRQLSGRDQELEQAlrESQRQVEALERAAREKEAMAKER-AGLAVKLAAAEREGRTL-- 806
Cdd:pfam13166 95 QEKIAKLKKEIKDHEEKLDAAEANLQKLDKEKEKL--EADFLDECWKKIKRKKNSALSEAlNGFKYEANFKSRLLREIek 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 807 --SEEAIRLRLEK-EALESSLFDVQRQ-LAQLEARREQLEA-DSQALLLAKetltgelaglrqQVTSTEEKAALDKELMT 881
Cdd:pfam13166 173 dnFNAGVLLSDEDrKAALATVFSDNKPeIAPLTFNVIDFDAlEKAEILIQK------------VIGKSSAIEELIKNPDL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 882 QKLVQA---------------EREAQASLREQRAAH-----EEDLQRLQHEKEAAWRELQAERAQLQG-----QLQQERE 936
Cdd:pfam13166 241 ADWVEQglelhkahldtcpfcGQPLPAERKAALEAHfddefTEFQNRLQKLIEKVESAISSLLAQLPAvsdlaSLLSAFE 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 937 ELLARMEAEKEELSKEIAALQQErdegllLAESEKQQALSLKESEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQ 1016
Cdd:pfam13166 321 LDVEDIESEAEVLNSQLDGLRRA------LEAKRKDPFKSIELDSVDAKIESINDLVASINELIAKHNEITDNFEEEKNK 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1017 DRNTLNA-LTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRElLEAQRKG 1095
Cdd:pfam13166 395 AKKKLRLhLVEEFKSEIDEYKDKYAGLEKAINSLEKEIKNLEAEIKKLREEIKELEAQLRDHKPGADEINKL-LKAFGFG 473
|
410 420 430
....*....|....*....|....*....|..
gi 568931104 1096 RDSQDSSEA------HRQEASELRRSLSEGAK 1121
Cdd:pfam13166 474 ELELSFNEEgkgyriIRKGGSQAAETLSEGER 505
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
1003-1175 |
4.29e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1003 MERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRD 1082
Cdd:PHA02562 204 IEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVIKMYEK 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1083 G-------------------LRRELLEAQRKGRDSQDSSEAHRQ---EASELRRSLSEGAKEREALRRSNEELRSAVKKA 1140
Cdd:PHA02562 284 GgvcptctqqisegpdritkIKDKLKELQHSLEKLDTAIDELEEimdEFNEQSKKLLELKNKISTNKQSLITLVDKAKKV 363
|
170 180 190
....*....|....*....|....*....|....*
gi 568931104 1141 ESERISLKLANEDKEQKLALLEEARVSVAKEAGEL 1175
Cdd:PHA02562 364 KAAIEELQAEFVDNAEELAKLQDELDKIVKTKSEL 398
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1177-1353 |
4.73e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1177 ASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQEL 1256
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1257 QGSQRKLQEQEAEF----RARERGLLGSLEEARGAEKRLL---DSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVE 1329
Cdd:COG4942 100 EAQKEELAELLRALyrlgRQPPLALLLSPEDFLDAVRRLQylkYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180
....*....|....*....|....
gi 568931104 1330 LARVEAQRRVAEAQLGGLRSALRR 1353
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLAR 203
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
870-988 |
5.02e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.69 E-value: 5.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 870 EEKAALDKELMTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQeREELLARmeaEKEEL 949
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQ-KEENLDR---KLELL 105
|
90 100 110
....*....|....*....|....*....|....*....
gi 568931104 950 SKEIAALQQERDEglllaESEKQQALSLKESEKTALSEK 988
Cdd:PRK12704 106 EKREEELEKKEKE-----LEQKQQELEKKEEELEELIEE 139
|
|
| GBP_C |
cd16269 |
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal ... |
876-959 |
5.45e-03 |
|
Guanylate-binding protein, C-terminal domain; Guanylate-binding protein (GBP), C-terminal domain. Guanylate-binding proteins (GBPs) are synthesized after activation of the cell by interferons. The biochemical properties of GBPs are clearly different from those of Ras-like and heterotrimeric GTP-binding proteins. They bind guanine nucleotides with low affinity (micromolar range), are stable in their absence, and have a high turnover GTPase. In addition to binding GDP/GTP, they have the unique ability to bind GMP with equal affinity and hydrolyze GTP not only to GDP, but also to GMP. This C-terminal domain has been shown to mediate inhibition of endothelial cell proliferation by inflammatory cytokines.
Pssm-ID: 293879 [Multi-domain] Cd Length: 291 Bit Score: 41.02 E-value: 5.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 876 DKELM-TQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIA 954
Cdd:cd16269 190 DQALTeKEKEIEAERAKAEAAEQERKLLEEQQRELEQKLEDQERSYEEHLRQLKEKMEEERENLLKEQERALESKLKEQE 269
|
....*
gi 568931104 955 ALQQE 959
Cdd:cd16269 270 ALLEE 274
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
527-782 |
5.92e-03 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 41.22 E-value: 5.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 527 QQQAKELRQELEKLQAAQEELKRQHNQLEDAQEDSVQEGARARRELERSHRQLEQLEVKRSGLTKelvevrealSCAILQ 606
Cdd:PRK11637 46 RDQLKSIQQDIAAKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRETQNTLNQLNKQIDELNA---------SIAKLE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 607 RDVLQTEK---AEVAEALTKAEAGRAQLELSltklraEEASLRDS--LSKMSALNESLAQDKLELNRLIAQLEEEKVALL 681
Cdd:PRK11637 117 QQQAAQERllaAQLDAAFRQGEHTGLQLILS------GEESQRGEriLAYFGYLNQARQETIAELKQTREELAAQKAELE 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 682 GRQQQAEHATTMAVEKQELLEQLRLEQEVERQGLQGSLcvaeqarEALEQQILVLRSERSHLQEQLAQLSRQLSGR-DQE 760
Cdd:PRK11637 191 EKQSQQKTLLYEQQAQQQKLEQARNERKKTLTGLESSL-------QKDQQQLSELRANESRLRDSIARAEREAKARaERE 263
|
250 260
....*....|....*....|..
gi 568931104 761 LEQALRESQRQVEALERAAREK 782
Cdd:PRK11637 264 AREAARVRDKQKQAKRKGSTYK 285
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
880-1033 |
6.26e-03 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 41.54 E-value: 6.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 880 MTQKLVQAEREAQASLREQRAAHEEDLQRLQHEKEA-----AWRELQAERAQLQGQlQQEREELLARMEAEKEElskeia 954
Cdd:PTZ00491 659 ITTKSQEAAARHQAELLEQEARGRLERQKMHDKAKAeeqrtKLLELQAESAAVESS-GQSRAEALAEAEARLIE------ 731
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 955 alqqerdeglllAESEKQQAlslkesEKTALSEKLMgtrhslAAISLEMERQKRDAQSRQEQDRNTLN-ALTSELRDLRA 1033
Cdd:PTZ00491 732 ------------AEAEVEQA------ELRAKALRIE------AEAELEKLRKRQELELEYEQAQNELEiAKAKELADIEA 787
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1631-1833 |
6.29e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 6.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1631 VQSLTDALTQSSASLSSTQDKNLHLQKALSTCEHDRQVLQERLDAARQALSEARRQSSSLGEQVQTLRGELASLELQRGD 1710
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1711 AEGQLQQLQQALRQR------------------QEGEAMALRSVQKLQEERRLLQERLGSLQRALAQLEAEKRDLERSAL 1772
Cdd:COG4942 95 LRAELEAQKEELAELlralyrlgrqpplalllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568931104 1773 QFDKDRVALRKTLDKVEREKLRSHEDTLRLNAERGRLDRTLTGAELDLAEAQQQIQHLEAQ 1833
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1008-1333 |
7.97e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 7.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1008 RDAQSRQEQDRNTLNALTSELRDLRAQLEEATAAHAQTVKELEERTGNLgrqrEACMREAEELRTQLRVLEDTRDGLRRE 1087
Cdd:COG4372 41 DKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQL----QAAQAELAQAQEELESLQEEAEELQEE 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1088 LLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARVS 1167
Cdd:COG4372 117 LEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1168 VAKEAGELRASLQEVERSRLEARRELQELRRQMKTLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGES 1247
Cdd:COG4372 197 EKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEE 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1248 SLEALKQELQGSQRKLQEQEAEFRARERGLLGSLEEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLE 1327
Cdd:COG4372 277 ELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVL 356
|
....*.
gi 568931104 1328 VELARV 1333
Cdd:COG4372 357 ELLSKG 362
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
438-661 |
8.64e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 8.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 438 ALHKRQLQVQDMRGRYEASQELLGSVRKQLSDSEGERRGLEEQLQRLRDQTAASAQAQEDAQREAQRLRSANEllsrekg 517
Cdd:COG4913 665 SAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE------- 737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 518 nlthslQVTQQQAKELRQELEKL--QAAQEEL-KRQHNQLEDAQEDSVQEGARARRELERSHRQ-LEQLEVKRSGLTKEL 593
Cdd:COG4913 738 ------AAEDLARLELRALLEERfaAALGDAVeRELRENLEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADL 811
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568931104 594 VEVREALS-CAILQRDVLQTEKAEVAEALTKAEagRAQLELSLTKLRAEEASLRDSLSKmsaLNESLAQ 661
Cdd:COG4913 812 ESLPEYLAlLDRLEEDGLPEYEERFKELLNENS--IEFVADLLSKLRRAIREIKERIDP---LNDSLKR 875
|
|
| COG5281 |
COG5281 |
Phage-related minor tail protein [Mobilome: prophages, transposons]; |
882-1380 |
8.84e-03 |
|
Phage-related minor tail protein [Mobilome: prophages, transposons];
Pssm-ID: 444092 [Multi-domain] Cd Length: 603 Bit Score: 41.13 E-value: 8.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 882 QKLVQAEREAQASLREQRAAHEEDLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIAALQQERD 961
Cdd:COG5281 2 AALAAAAALAAAAAAAAASAAAAAAAAALAAAAAAAAAAAGLAAAAAAAAAASLAAAAAAAALAAAAAAAAAAAAADALA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 962 EGLLLAESEKQQALSLKESEKTALSEKLMGTRhSLAAISLEMERQKRDAQSRQEQDRNTLNALTSELRDLRAQLEEATAA 1041
Cdd:COG5281 82 AALAEDAAAAAAAAEAALAALAAAALALAAAA-LAEAALAAAAAAAAAAAAAAAAAAAAAAAAAEAAKAAAAAAAAAALA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1042 HAQTVKELEERTGNLGRQREACMREAEELRTQLRVLEDTRDGLRRELLEAQRKGRDSQDSSEAHRQEASELRRSLSEGAK 1121
Cdd:COG5281 161 AAAAAAAAAAAAAAAAAALAAASAAAAAAAAKAAAEAAAEAAAAAEAAAAAAAAAAEAAAAEAQALAAAALAEQAALAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1122 EREALRRSNEELRSAVKKAESERislKLANEDKEQKLALLEEARVSVAKEAGELRASLQEVERSRLEARRELQELRRQMK 1201
Cdd:COG5281 241 SAAAQALAALAAAAAAAALALAA---AAELALTAQAEAAAAAAAAAAAAAQAAEAAAAAAEAQALAAAAAAAAAQLAAAA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1202 TLDSDNGRLGRELADLQGRLALGERTEKESRREALGLRQRLLKGESSLEALKQELQGSQRKLQEQEAEFRARERGLLGSL 1281
Cdd:COG5281 318 AAAAQALRAAAQALAALAQRALAAAALAAAAQEAALAAAAAALQAALEAAAAAAAAELAAAGDWAAGAKAALAEYADSAT 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 1282 EEARGAEKRLLDSARSLELRLEAVRAETSELGLRLSAAEGRAQGLEVELARVEAQRRVAEAQLGGLRSALRRGLGLGRVS 1361
Cdd:COG5281 398 NVAAQVAQAATSAFSGLTDALAGAVTTGKLLFDALASSIASIADALANAALASAADALGGALAGALGGLFGGGGGAAAGA 477
|
490
....*....|....*....
gi 568931104 1362 SSPAREAPAGGSGDGLSSP 1380
Cdd:COG5281 478 AVYAGALGPFASGGVVSGP 496
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
757-975 |
9.78e-03 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 40.70 E-value: 9.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 757 RDQELEQA----LRESQRQV----EALERAAREKEAMAKERAGL--AVKLAAAEREGRTLSEEAIRLRLEKEALESSLFD 826
Cdd:PRK05035 441 IEQEKKKAeeakARFEARQArlerEKAAREARHKKAAEARAAKDkdAVAAALARVKAKKAAATQPIVIKAGARPDNSAVI 520
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 827 VQRQLAQLEARREQLEADSQALLLAKETlTGELAGLR--------QQVTSTEEKAALDKElmtQKLVQAEREAQASLREQ 898
Cdd:PRK05035 521 AAREARKAQARARQAEKQAAAAADPKKA-AVAAAIARakakkaaqQAANAEAEEEVDPKK---AAVAAAIARAKAKKAAQ 596
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568931104 899 RAAHEE-DLQRLQHEKEAAWRELQAERAQLQGQLQQEREELLARMEAEKEELSKEIA------ALQQERDEGLLLAESEK 971
Cdd:PRK05035 597 QAASAEpEEQVAEVDPKKAAVAAAIARAKAKKAEQQANAEPEEPVDPRKAAVAAAIArakarkAAQQQANAEPEEAEDPK 676
|
....
gi 568931104 972 QQAL 975
Cdd:PRK05035 677 KAAV 680
|
|
| |
