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Conserved domains on  [gi|568956336|ref|XP_006530834|]
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prostaglandin E2 receptor EP1 subtype isoform X1 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
69-394 5.11e-107

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15144:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 294  Bit Score: 318.26  E-value: 5.11e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAQVAGRMRRRRSAaTFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGG---- 144
Cdd:cd15144    1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 145 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWC 224
Cdd:cd15144   80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 225 FISLGPRGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLrarwrrrrsrrfrktagpddRRRWGSRGPrlasassas 304
Cdd:cd15144  160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV--------------------RARLRKKCS--------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 305 sitsatatlrssrggGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGW---NSNSLQRPLFLAVRLASWNQ 381
Cdd:cd15144  211 ---------------CSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSyerPKHQYEKLLFLGVRLASWNQ 275
                        330
                 ....*....|...
gi 568956336 382 ILDPWVYILLRQA 394
Cdd:cd15144  276 ILDPWVYILLRRA 288
 
Name Accession Description Interval E-value
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
69-394 5.11e-107

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 318.26  E-value: 5.11e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAQVAGRMRRRRSAaTFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGG---- 144
Cdd:cd15144    1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 145 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWC 224
Cdd:cd15144   80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 225 FISLGPRGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLrarwrrrrsrrfrktagpddRRRWGSRGPrlasassas 304
Cdd:cd15144  160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV--------------------RARLRKKCS--------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 305 sitsatatlrssrggGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGW---NSNSLQRPLFLAVRLASWNQ 381
Cdd:cd15144  211 ---------------CSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSyerPKHQYEKLLFLGVRLASWNQ 275
                        330
                 ....*....|...
gi 568956336 382 ILDPWVYILLRQA 394
Cdd:cd15144  276 ILDPWVYILLRRA 288
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
314-388 5.79e-04

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 41.51  E-value: 5.79e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568956336  314 RSSRGGGSARRVhahdVEMVGQLVGIMVVsciCWSPLLVLVVLAIGGWN---SNSLQRPLFLAVRLASWNQILDPWVY 388
Cdd:pfam00001 186 KSSERTQRRRKA----LKTLAVVVVVFIL---CWLPYHIVNLLDSLALDcelSRLLDKALSVTLWLAYVNSCLNPIIY 256
 
Name Accession Description Interval E-value
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
69-394 5.11e-107

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 318.26  E-value: 5.11e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAQVAGRMRRRRSAaTFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGG---- 144
Cdd:cd15144    1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 145 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWC 224
Cdd:cd15144   80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 225 FISLGPRGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLrarwrrrrsrrfrktagpddRRRWGSRGPrlasassas 304
Cdd:cd15144  160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV--------------------RARLRKKCS--------- 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 305 sitsatatlrssrggGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGW---NSNSLQRPLFLAVRLASWNQ 381
Cdd:cd15144  211 ---------------CSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSyerPKHQYEKLLFLGVRLASWNQ 275
                        330
                 ....*....|...
gi 568956336 382 ILDPWVYILLRQA 394
Cdd:cd15144  276 ILDPWVYILLRRA 288
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
69-395 3.44e-66

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 213.26  E-value: 3.44e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAqvagRMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGG--AC 146
Cdd:cd14981    1 GESPAPPALMFVFGVLGNLLALIVLA----RSSKSHKWSVFYRLVAGLAITDLLGILLTSPVVLAVYASNFEWDGGqpLC 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 147 HFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFI 226
Cdd:cd14981   77 DYFGFMMSFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLLGLGSYVLQYPGTWCFL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 227 SLGPrGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLrarwrrrrsrrfrktagpddRRRWGSRgprlasassassi 306
Cdd:cd14981  157 DFYS-KNTGDAAYAYLYSILGLLILLVTLLCNLLVIITLL--------------------RMRRRKK------------- 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 307 tsatatlRSSRGGGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGWnSNSLQRPLFLAVRLASWNQILDPW 386
Cdd:cd14981  203 -------RHRRSRRSARRQKRNEIQMVVLLLAITVVFSVCWLPLMIRVLINATGD-SEKNGKTDLLAVRMASWNQILDPW 274

                 ....*....
gi 568956336 387 VYILLRQAM 395
Cdd:cd14981  275 VYILLRKEV 283
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
76-395 3.03e-48

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 166.54  E-value: 3.03e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  76 IFSMTLGAVSNVLALALLAQVAGRMRRRrSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRA-----PAGGACHFLG 150
Cdd:cd15145    8 IIFMTVGILSNSLAIAILMKAYQRFRQK-SKASFLLLASGLVITDFFGHLINGTIAVFVYASDKDwirfdQSNILCSVFG 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 151 GCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFISLGP 230
Cdd:cd15145   87 ICMVFFGLCPLLLGSVMAVERCIGVTKPIFHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWCFYKTEH 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 231 RGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALlrarwrrrrsrrfrktagpddrrrwgsrgprlasassassitsat 310
Cdd:cd15145  167 IEDWEDRFYLLLFSFLGLLALAISFLCNAITGITL--------------------------------------------- 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 311 atLRSSRGGGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLV-LVVLAIGGWNSNSLQRPLFLAVRLASWNQILDPWVYI 389
Cdd:cd15145  202 --LRVKFRSQQHRQGRSHHFEMVIQLLAIMCVSCICWSPFLVtMANIGINGRDSLESCETILFALRMATWNQILDPWVYI 279

                 ....*.
gi 568956336 390 LLRQAM 395
Cdd:cd15145  280 LLRKAV 285
7tmA_TXA2_R cd15143
thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
99-395 1.08e-35

thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The thromboxane receptor, also known as the prostanoid TP receptor, is a class A G-protein coupled receptor whose endogenous ligand is thromboxane A2 (TXA2). TXA2 is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and stimulates platelet aggregation, Ca2+ influx into platelets, and also causes vasoconstriction. TXA2 has been shown to be involved in immune regulation, angiogenesis and metastasis, among many others. Activation of TXA2 receptor is coupled to G(q) and G(13), resulting in the activations of phospholipase C and RhoGEF, respectively. TXA2 receptor is widely distributed in the body and is abundantly expressed in thymus and spleen.


Pssm-ID: 320271 [Multi-domain]  Cd Length: 296  Bit Score: 133.41  E-value: 1.08e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  99 RMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRA-----PAGGACHFLGGCMVFFGLCPLLLGCGMAVERCV 173
Cdd:cd15143   30 RKTKSRSRSSFLIFLCGLVVTDFLGLLVTGTIVISFHLTNFNwrvvdPDCYLCNFMGLSMVFYGLCPLLLGATMAVERFF 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 174 GVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFISLGPRGGwrQALLAGLFAGLGLAALLA 253
Cdd:cd15143  110 GINRPFSRSTAMSKRRAWYMVGMVWAFAFLLGLLPILGLGRYTLQYPGSWCFLTLLFDSK--DVAFGLLFSFLGILSVGL 187
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 254 ALVCNTLSGLALlrarwrrrrsrrfrktagpddrrrwgsrgprlasassassitsatatLRSSRGGGSARRVHAHDVEMV 333
Cdd:cd15143  188 SFLLNTVSVVTL-----------------------------------------------CRVYHDRESVQRRRDSEVEMM 220
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568956336 334 GQLVGIMVVSCICWSPLLVLVV---------LAIGGWNSNSLQRPLFLAVRLASWNQILDPWVYILLRQAM 395
Cdd:cd15143  221 VQLLGIMVIASVCWLPLLVFIAqtvlqkppaMLLAGQIPRLTEKKLLIYLRFATWNQILDPWVYILFRRAV 291
7tmA_PGE2_EP3 cd15146
prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G ...
71-393 2.13e-29

prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP3, also called prostanoid EP3 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP3 receptor by PGE2 preferentially couples to G(i) protein. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels, which subsequently produces smooth muscle contraction. Knockout mice studies suggest that the EP3 receptor may act as a systemic vasopressor. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320274 [Multi-domain]  Cd Length: 308  Bit Score: 116.52  E-value: 2.13e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  71 SPALPIFSMTLGAVSNVLALALLAQVAgRMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRA-----PAGGA 145
Cdd:cd15146    3 SVAFPITMMITGMVGNALAMLLVYRSY-RKKENKRKRSFLLCIGSLALTDLFGQLLTSPIVISVYLSDRKwervdPSGRL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 146 CHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCF 225
Cdd:cd15146   82 CPFFGLCMTVFGLCPLFIASAMAIERALAIRAPHWYSSHMKTRVTKAVLLGIWLAVLAFALLPIAGVGQYTLQWPGTWCF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 226 ISLGpRGGWRQALLAGLFAGLGLAALLAALVCNTLSGLALLrarwrrrrSRRFRKTAGPDDRRRWGsrgpRLAsassass 305
Cdd:cd15146  162 ISTG-DGEPGNNFFASTFASLGLFSLCVTFSCNLATIRALV--------SRCKTKAGASVSSKQWE----RIT------- 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 306 itsatatlrssrgggsarrvhahdVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGWNSNSLQRP---------------L 370
Cdd:cd15146  222 ------------------------TETLIQLLGIMCVLSACWSPLLVLMLKMISNHTSSEHCKSatappqstelqkdcnF 277
                        330       340
                 ....*....|....*....|....
gi 568956336 371 FL-AVRLASWNQILDPWVYILLRQ 393
Cdd:cd15146  278 FLtAVRLASLNQILDPWVYLLLRK 301
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
69-395 1.97e-23

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 99.88  E-value: 1.97e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAqvagRMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGRAPAGGA-CH 147
Cdd:cd15142    1 ATPPTIPAVMFIFGVVGNLIAIVVLC----KSRKEQKETTFYTLVCGLAVTDLLGTCLASPVTIATYLKGRWPGGQPlCE 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 148 FLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFIS 227
Cdd:cd15142   77 YFSFILLFFSLSGLSIICAMSIERYLAINHAYFYNHYVDKRLAGLTLFAIYASNILFCALPSMGLGKSKLQYPKTWCFID 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 228 lgprggWRQALLAGLF-----AGLGLAALLAALVCNTLSGLALLRARWRRRRSRRFRKTAGPDDRRRWGSRgprlasass 302
Cdd:cd15142  157 ------WRTNVSVHAAysymyAGFSSLLILVTVLCNVLVCGALIRMHRQFVRRTSLGTDQRLSDFRRRRSF--------- 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 303 assitsatatlrssrgggsaRRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLaiggwnsNSLQRPLF----------L 372
Cdd:cd15142  222 --------------------RRMAGAEIQMVILLIATSVVVLICSIPLVVRVFV-------NQLYQPAVekdldknpdlQ 274
                        330       340
                 ....*....|....*....|...
gi 568956336 373 AVRLASWNQILDPWVYILLRQAM 395
Cdd:cd15142  275 AIRIASVNPILDPWIYILLRKTV 297
7tmA_PGE2_EP2 cd15139
prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G ...
69-392 3.26e-14

prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP2, also called prostanoid EP2 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP2 receptor by PGE2 causes cAMP accumulation through G(s) protein activation, which subsequently produces smooth muscle relaxation and mediates the systemic vasodepressor response to PGE2. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320267 [Multi-domain]  Cd Length: 299  Bit Score: 72.89  E-value: 3.26e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  69 GTSPALPIFSMTLGAVSNVLALALLAQVAgRMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYT-----AGRAPAG 143
Cdd:cd15139    1 GGSPAISALMFSAGVLGNVLALVLLERRR-RKEVGRRQSLFHVLVTSLVITDLLGTCLISPVVLASYSrnttlVGMSPNR 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 144 GACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYeLQY-PGT 222
Cdd:cd15139   80 LVCGYFGFAMTFFSLATMLILLAMALERCLSIGHPYFYERYVSKRCGYVTIPLIYLLCALFCLFPFLGFGKY-VQYcPGT 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 223 WCFISLGPRGGWRQALLAGLFAGLGLAALLAAlVCNTLSGLALLRARwrrrrsrrfrktagpddRRRWGSRgprlasass 302
Cdd:cd15139  159 WCFIDMNPEASEHRAYANLYATLLLLLIVAVV-LCNASVIYHLVRMY-----------------RRRKRNR--------- 211
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 303 assitsatatlRSSRGGGSARRVH---AHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGWNSNslQRPLFLAVRLASW 379
Cdd:cd15139  212 -----------SSVGGRARSHRRRfsmAEEVEHLILLVFMTIIFVICSLPLTIQVYMNTFSDSEN--HKWDLIALRFLSV 278
                        330
                 ....*....|...
gi 568956336 380 NQILDPWVYILLR 392
Cdd:cd15139  279 NPIIDPWVFIILS 291
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
99-395 7.27e-13

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 69.08  E-value: 7.27e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336  99 RMRRRRSAATFLLFVASLLAIDLAGHVIPGALVLRLYT-----AGRAPAGGACHFLGGCMVFFGLCPLLLGCGMAVERCV 173
Cdd:cd15141   29 RKERRTKSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAqnsslLGLAAGQPLCHLFAFAMTFFGLASMLILFAMAVERCL 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 174 GVTQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFISLGPRGGWRQALLAGLFAGLGLAALLA 253
Cdd:cd15141  109 AISHPYFYAQHSGRRLAKLALPAIYAFGALFCALPLLGVGRHKQYCPGTWCFIRMTVPGHREPGSLAFSLLYASLMALLI 188
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 254 ALV--CNTLSGLALLRARWRrrrsrrfrktagpdDRRRWGSrgprlasassassitsatatLRSSRGGGSARRVHAHDVE 331
Cdd:cd15141  189 AAIflCNGSVTVSLCRMYRG--------------QKARRGS--------------------LRRCGRLGWWLGQGEEEVD 234
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568956336 332 MVGQLVGIMVVSCICWSPLLVLVVlaIGGWNSNSLQRPLFLAVRLASWNQILDPWVYILLRQAM 395
Cdd:cd15141  235 HLILLALMTVIFVVCSLPLTIRAF--LGAIAPDGNESGDLLAFRFSAFNPILDPWIFIIFRKAV 296
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
103-228 6.07e-05

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 44.89  E-value: 6.07e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 103 RRSAATFLLFVASLLAIDLAGHVIPGALVLRLYTAGR-----APAGGA--CHFLGGCMVFFGLCPLLLGCGMAVERCVGV 175
Cdd:cd15140   39 RPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRslvglTPAGNLnlCQVFAFLMIFFGLASTFILLAMALECWLSL 118
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 568956336 176 TQPLIHAARVSVARARLALAVLAAMALAVALLPLVHVGRYELQYPGTWCFISL 228
Cdd:cd15140  119 GHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQYCPGTWCFIQM 171
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
314-388 5.79e-04

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 41.51  E-value: 5.79e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568956336  314 RSSRGGGSARRVhahdVEMVGQLVGIMVVsciCWSPLLVLVVLAIGGWN---SNSLQRPLFLAVRLASWNQILDPWVY 388
Cdd:pfam00001 186 KSSERTQRRRKA----LKTLAVVVVVFIL---CWLPYHIVNLLDSLALDcelSRLLDKALSVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
313-391 9.01e-03

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 37.65  E-value: 9.01e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568956336 313 LRSSRGGGSARRVHAHDVEMVGQLVGIMVVSCICWSPLLVLVVLAIGGWNSNSLQRPLFLAVRLASW-NQILDPWVYILL 391
Cdd:cd00637  195 IRSSSSNSSRRRRRRRERKVTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPLPRILYFLALLLAYlNSAINPIIYAFF 274
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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