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Conserved domains on  [gi|585966|sp|P37088|]
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RecName: Full=Amiloride-sensitive sodium channel subunit alpha; AltName: Full=Alpha-NaCH; AltName: Full=Epithelial Na(+) channel subunit alpha; Short=Alpha-ENaC; Short=ENaCA; AltName: Full=Nonvoltage-gated sodium channel 1 subunit alpha; AltName: Full=SCNEA

Protein Classification

epithelial sodium channel family protein( domain architecture ID 10017482)

epithelial sodium channel (ENaC) family protein acts as sodium channel transporter; similar to Homo sapiens acid-sensing ion channel 1 and amiloride-sensitive sodium channel subunits alpha/beta/gamma/delta

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
54-647 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


:

Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 999.63  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      54 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 133
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     134 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 212
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     213 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 292
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     293 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 372
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     373 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 452
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     453 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 532
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     533 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 612
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 585966     613 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 647
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
54-647 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 999.63  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      54 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 133
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     134 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 212
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     213 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 292
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     293 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 372
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     373 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 452
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     453 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 532
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     533 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 612
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 585966     613 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 647
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
62-572 5.08e-114

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 349.54  E-value: 5.08e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      62 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 139
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     140 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 219
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     220 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 297
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     298 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 373
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     374 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 453
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     454 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 531
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 585966     532 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 572
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
PHA02682 PHA02682
ORF080 virion core protein; Provisional
607-665 1.70e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 47.16  E-value: 1.70e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 585966    607 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 665
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
 
Name Accession Description Interval E-value
ENaC TIGR00859
sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC ...
54-647 0e+00

sodium channel transporter; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the vertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273304 [Multi-domain]  Cd Length: 595  Bit Score: 999.63  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      54 SYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTIC 133
Cdd:TIGR00859   1 SYRELLVWFCNNTTTHGAIRIVCSRGGRLKRALWALLTLLALALLLWQCGLLVRYYLSYPVSVSLSVNSDKLTFPAVTLC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     134 TLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSR-RDLRGTLPHPLQRLRVPPPPHGaRRARSVASSLRD 212
Cdd:TIGR00859  81 NLNPYRYSKVKHLLEELDLETAQTLLSLYGYNSSLARSARSNNRnRIPLVVLDETLPRHPVPRDLFT-RQVHNKLISNRS 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     213 NNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQA 292
Cdd:TIGR00859 160 NSPQVNASDWKVGFKLCNNNGSDCFYRTYTSGVQAVREWYRFHYINIFAQVPAEDKDRMGYQLEDFILTCRFDGESCDAR 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     293 NYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPG 372
Cdd:TIGR00859 240 NFTHFHHPMYGNCYTFNSGENSNLLTSSMPGAENGLKLVLDIEQDEYLPLLSTEAGARVMVHSQDEPPFIDDLGFGVRPG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     373 VETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSS 452
Cdd:TIGR00859 320 TETSISMQEDELQRLGGPYGDCTENGSDVPVENLYNSSYSIQACLRSCFQRYMVENCGCAYYHYPLPGGAEYCNYEQHPD 399
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     453 WGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELN 532
Cdd:TIGR00859 400 WAYCYYKLYAEFDQEELGCFSVCREPCNFTEYKLTLSMARWPSAASEDWLLHVLSRQNEYNITLIRNGIAKLNIFFEELN 479
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     533 YKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAELVFDLLVIMFLMLLRRFRsRYWSPGRGGRGAQEVASTLASS 612
Cdd:TIGR00859 480 YRTIEESPAYNVVTLLSNLGGQMGLWMGASVLCVLELLELIIDLIFITLLRLLWRFR-KWWQRRRGPPYAEPPEPVSADT 558
                         570       580       590
                  ....*....|....*....|....*....|....*..
gi 585966     613 PPSHFCPHPMSLSLSQPGPAPSP--ALTAPPPAYATL 647
Cdd:TIGR00859 559 PPSLQLDDPPTFPSALPLPHASGlsLPGTPPPNYNTL 595
ASC pfam00858
Amiloride-sensitive sodium channel;
62-572 5.08e-114

Amiloride-sensitive sodium channel;


Pssm-ID: 459966 [Multi-domain]  Cd Length: 439  Bit Score: 349.54  E-value: 5.08e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      62 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNIN--LNSDKLVFPAVTICTLNPYR 139
Cdd:pfam00858   1 FCENTSIHG-VRYIKSKDGFLRRLFWLLLFLASLIFLIYLISLLFEKYLSYPVITVIEeiLYVWNVPFPAVTICNLNPFR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     140 YPEIKEELEELDRITEQTLFDLykyssfttlvagsrsrrdlrgtlphplqrlrvpppphgarrarsvasslrdnnpqvdw 219
Cdd:pfam00858  80 YSALKELSLFYDNLSFLLYLKF---------------------------------------------------------- 101
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     220 kdwkigfqlcNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFN--QVSCNqANYSHF 297
Cdd:pfam00858 102 ----------KFLEKILKSLTSNTEELEDELKLLLDFTNELLNSLSGYILNLGLRCEDLIVSCSFGgeKEDCS-ANFTPI 170
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     298 HHpMYGNCYTFNDKNNSNLWMSSM---PGINNGLSLMLRAEQND-FIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGV 373
Cdd:pfam00858 171 LT-EYGNCYTFNSKDNGSKLYPRRlkgAGSGRGLSLILNIQQSEtYSPLDYQAAGFKVSIHSPGEPPDVDKRGFSVPPGT 249
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     374 ETSISMRKETLDRLGGDYGDCTKNgsdvPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVeycdyrKHSSW 453
Cdd:pfam00858 250 ETSVGIQPTEITTLKRPYGNCTFD----DEKLLYFKSYSQSNCLLECRQNYILKLCGCVPFFYPLPPGT------KTGAD 319
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     454 GYCYYKLQVDFSS--DHLGCFtKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKEL 531
Cdd:pfam00858 320 IPCLLNYEDHLLEvnEGLSCQ-DCLPPCNETEYETEISYSTWPSLSSQLFLLYYELSTYNNSSSTIRENLAKLNIYFKEL 398
                         490       500       510       520
                  ....*....|....*....|....*....|....*....|.
gi 585966     532 NYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 572
Cdd:pfam00858 399 NYETYRRSPAYTWTDLLSSIGGQLGLFLGASVLSLVEIVYF 439
deg-1 TIGR00867
degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of ...
62-572 3.33e-67

degenerin; The Epithelial Na+ Channel (ENaC) Family (TC 1.A.06)The ENaC family consists of sodium channels from animals and has no recognizable homologues in other eukaryotes or bacteria. The vertebrate ENaC proteins from epithelial cells cluster tightly together on the phylogenetic tree: voltage-insensitive ENaC homologues are also found in the brain. Eleven sequenced C. elegans proteins, including the degenerins, are distantly related to the vertebrate proteins as well as to each other. At least some ofthese proteins form part of a mechano-transducing complex for touch sensitivity. Other members of the ENaC family, the acid-sensing ion channels, ASIC1-3,are homo- or hetero-oligomeric neuronal H+-gated channels that mediate pain sensation in response to tissue acidosis. The homologous Helix aspersa(FMRF-amide)-activated Na+ channel is the first peptide neurotransmitter-gated ionotropic receptor to be sequenced.Mammalian ENaC is important for the maintenance of Na+ balance and the regulation of blood pressure. Three homologous ENaC subunits, a, b and g, havebeen shown to assemble to form the highly Na+-selective channel.This model is designed from the invertebrate members of the ENaC family. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273309 [Multi-domain]  Cd Length: 600  Bit Score: 231.27  E-value: 3.33e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966      62 FCNNTTIHGaIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRY- 140
Cdd:TIGR00867   2 FCYKTTFHG-IPMVATASNSFSRAFWVALFLICLLMFAYQAYILISKYFQYEKIVDIQLKFETAPFPAITVCNLNPYKYs 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     141 -----PEIKEELE------------ELDRITEQTLFDLYKYSSFTTLVAgsRSRRDLRGTLPHPLQRLRVPPPPHGARRA 203
Cdd:TIGR00867  81 lvrsvPEISETLDafdraigasnksEGDELELITERKLHSKTRRQKLKA--KGAPELEDGMYEPVFSQCTCDEQGMGECK 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     204 RSVASSLRDNN------------------PQVDWKDWKIGfqLCNQN--------------KSDCFYQTYS------SGV 245
Cdd:TIGR00867 159 SQRSAEPRGHTsrcicaydrvtgdawpcfPYSTWTTKKCS--LCNDNgfcpkpnkkgakeqKDPCLCQSESnhcvshPGK 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     246 DAVREWYRFHYINILSRLPETLPSLEED---------------------------------------TLGNFIFACRFNQ 286
Cdd:TIGR00867 237 GIIREIWPNLENNDPTTGKPTTEAPETLealgfgnmtdevaittqakenlifamaalsdkarealsyTKHELILKCSFNG 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     287 VSCN-QANYSHFHHPMYGNCYTFNDKNNSNLwMSSMPGINNGLSLMLRAEQNDFIPLlSTVTGARVMVHGQDEPAFMDDG 365
Cdd:TIGR00867 317 KPCDiDRDFTLHIDPVFGNCYTFNYNRSVNL-SSSRAGPMYGLRLLLFVNQSDYLPT-TEAAGVRLTIHDKDEFPFPDTF 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     366 GFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVP-VENLYpsKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEY 444
Cdd:TIGR00867 395 GYSAPTGYISSFGVRLKQMSRLPAPYGNCVDTGKDSSyIYKGY--IYSPEGCHRSCFQRLIIAKCGCADPRFPVPEGTRH 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966     445 CD---------YRKHSSWgycyyklQVDFSSDHLGCftKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVN 515
Cdd:TIGR00867 473 CQafnktdrecLETLTGD-------LGELHHSIFKC--RCQQPCQESIYTTTYSAAKWPSGSLKITLGSCDSNTASECNE 543
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 585966     516 NKRNGVAKVNIFFKELNYKTNSESPSVTMVTLLSNLGSQWSLWFGSSVLSVVEMAEL 572
Cdd:TIGR00867 544 YYRENAAMIEVFYEQLNYELLTESEAYTLVNLIADFGGQLGLWLGASVITVCEFVFL 600
PHA02682 PHA02682
ORF080 virion core protein; Provisional
607-665 1.70e-05

ORF080 virion core protein; Provisional


Pssm-ID: 177464 [Multi-domain]  Cd Length: 280  Bit Score: 47.16  E-value: 1.70e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 585966    607 STLASSPPshfCPHPMSLSLSQPGPAPSPALTAP------PPAYATLGPRPSPGGSAGASSSTCP 665
Cdd:PHA02682  80 SPLAPSPA---CAAPAPACPACAPAAPAPAVTCPapapacPPATAPTCPPPAVCPAPARPAPACP 141
PUMA pfam15826
Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated ...
613-669 2.05e-03

Bcl-2-binding component 3, p53 upregulated modulator of apoptosis; PUMA (p53 upregulated modulator of apoptosis) is a family of eukaryotic proteins that are a target for activation by p53. The proteins contain BH3 domains and are induced in cells after p53 activation. They bind to Bcl-2, localize to the mitochondria to induce cytochrome c release, and activate the rapid induction of apoptosis.


Pssm-ID: 374148 [Multi-domain]  Cd Length: 189  Bit Score: 39.94  E-value: 2.05e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 585966     613 PPSHFCPHPMSLSLSQPG-----------PAPSPALTAPPP---AYATLGPRPSPGGSAGASSSTCPLGGP 669
Cdd:pfam15826  25 PLGRLVPSAVSCGLCEPGlnprvagpsllPAPGAALAPPSPppvWVSCTSQPRAYGGPRWRRRAPRPLAGP 95
PLN02258 PLN02258
9-cis-epoxycarotenoid dioxygenase NCED
590-653 3.13e-03

9-cis-epoxycarotenoid dioxygenase NCED


Pssm-ID: 215145 [Multi-domain]  Cd Length: 590  Bit Score: 40.84  E-value: 3.13e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 585966    590 SRYWSPGRGGRGAQEVASTLASSPPSHFCPHPMS------LSLSQPGPAPSPALTAPPPAYATLGPRPSP 653
Cdd:PLN02258   3 SSNPTSRSQSHASSSSSSSSQSSPPSSTSPRPRRrkpsasSLLHTPSILPLPKLSSPSPPSVTLPPAATT 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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