|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.86e-169 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 474.70 E-value: 2.86e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKLWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 597709685 321 INTLVAILATMSITLLPISPMILAIV 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.55e-139 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 399.56 E-value: 1.55e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSlNPTLLIAMALL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKLWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 597709685 321 INTL-VAILATMSITLLPISPMILAIV 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
6.92e-138 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 395.06 E-value: 6.92e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKLWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 597709685 321 INTLVAILATMSITLLPISPMILAI 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.47e-118 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 345.68 E-value: 2.47e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPhTTNHMKL-WH-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKMkWQfEN 319
|
330 340
....*....|....*....|....*
gi 597709685 319 KPINTLVAILATMSITLLPISPMIL 343
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLS 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
4.74e-101 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 301.50 E-value: 4.74e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKLWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*
gi 597709685 321 INTLVAILATMSITLLPISPMILAI 345
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-267 |
6.55e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 262.94 E-value: 6.55e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQ 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 TGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260
....*....|....*....|....*..
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISL 267
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
2.40e-60 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 196.97 E-value: 2.40e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 1 MNPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWq 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 81 tgqwdITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTsqsLNPTLLIAMALL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 161 SAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYCATITLppHTTNHMKLWHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|...
gi 597709685 321 INTLVAILATMSITLLPISPMIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-275 |
2.59e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.15 E-value: 2.59e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 5 AKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 85 DITqltcpvscLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNP-TLLIAMALLSAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 164 LGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSiKTLKLATLMTTWTKTPTLSAT 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270
....*....|....*....|....*....|..
gi 597709685 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-275 |
6.57e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 166.88 E-value: 6.57e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 7 LIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSmtnawqTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 87 TQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPTLLIAMALLSAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 167 WMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTLSATLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260
....*....|....*....|....*....
gi 597709685 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-342 |
8.21e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.59 E-value: 8.21e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 8 IFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 88 qLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPmtLFFMTSQSLNPTLLIAMALLSAALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAP--LLILAFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 168 MGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTLSATLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 248 LLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIALLSLLSLFFYLRLAYcatiTLPPHTTNHMKLWHTNKPINTLVAI 327
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY----KSLILSNWMINFLMKINLLYSGLFI 308
|
330
....*....|....*
gi 597709685 328 LATMSITLLPISPMI 342
Cdd:MTH00197 309 LLMMMLPLLMIFTMI 323
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-270 |
1.16e-30 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 120.99 E-value: 1.16e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 14 LLGTAITTSSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALILF--------------SSMTNA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 79 WQTGQWDITQLTcpVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKL----PPMTLFFMTSQSLNP--- 151
Cdd:COG1007 192 LAAGGANSPLLL--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwq 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 152 TLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLAL--LNFYL--YVLITTAVFLTLNSIK---- 223
Cdd:COG1007 270 LLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVILLLSrkgg 349
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 597709685 224 -TLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:COG1007 350 eAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.67e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 117.82 E-value: 4.67e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 13 LLLGTAITTSSNHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASALILFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 79 WQTGQWDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFmtSQSLNPTLLIAMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 159 LLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIII----IYSPKLALLNFYLYVLITTAVFLTLNSIKTLK--LATLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 597709685 233 TWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.58e-28 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 112.02 E-value: 1.58e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 23 SNHWIMAWTGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 91 CPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLL-STAMKLPP-----MTLFFMTSQSLNPTLLIAMALLSAAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 165 GGWMGLNQTQTRKILAFSSISHLGWMAIII----IYSPKLALLNFYLYVLITTAVFLTLNSI-----KTLKLATLMTTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 597709685 236 KTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
4.70e-27 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 110.88 E-value: 4.70e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 13 LLLGTAITTSSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 88 QLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTamkLPPMTLFFMTSQ-SLNPTLLIAMALLSAALGG 166
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLAT---VPKIGVFSILVQiGPVTNVVLICAVLSIIYGA 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 167 WMGLNQTQTRKILAFSSISHLGW----MAIIIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLK--LATLMTTWTKTPTL 240
Cdd:MTH00199 263 IGALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVI 342
|
250 260
....*....|....*....|....*..
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-281 |
2.05e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.44 E-value: 2.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 14 LLGTAITTSSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALIL--------------FSSMTNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 79 WQTGQWDITQLTcpVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKL----PPMTLFFMTSQSLNPT-- 152
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaVLLRLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 153 -LLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLAL--LNFYL--YVLITTAVFLTLNSIKT-LK 226
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFGVISLLRRkGG 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 597709685 227 LATLMTTWT----KTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATI 281
Cdd:PRK05777 351 EAESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVI 409
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-275 |
1.90e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 100.41 E-value: 1.90e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 14 LLGTAITTSSNHWIMAWTGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQLTCP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 93 VSCLILT------------SAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKL----PPMTLFFMTSQSLNPT---L 153
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIaifaVFLRLFLYILFGFSEAwqiF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 154 LIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITT-------AVFLTLNSIK--- 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYAlmslgafGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 597709685 224 TLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGL 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-283 |
3.11e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 93.67 E-value: 3.11e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 13 LLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQLTCP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 93 VS----------CLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAM-KLPP------MTLFFMTSQSLNP-TLL 154
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFLgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 155 IAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYV----LITTAVFLTLNSI----KTLK 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAAGAIeratGTRD 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 597709685 227 LATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
7.40e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 87.61 E-value: 7.40e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 15 LGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASALILFSSMTNAWQTGQ-- 83
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNeg 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 84 ------------WDITQLTCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTamkLPPMTLF-FMTSQSLN 150
Cdd:MTH00198 279 mlgtilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAI---IPKFTVYiLLTSLVIT 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 151 PTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLI-TTAVFLTLNSIKTL---- 225
Cdd:MTH00198 356 SKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALASFTVICTLeefg 435
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 597709685 226 --------------------KLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 436 trtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
6.60e-17 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 81.59 E-value: 6.60e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 7 LIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHP-RAIEAATKYFLVQAAASALIL--FSSM--TNAWQT 81
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFSWLygLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 82 GQWDI------TQLTCPVSCLI----LTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPM--------TLFF 143
Cdd:CHL00049 194 ELQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASalatrifdIPFY 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 144 MTSQSLNPTLLIaMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII-------YSPKLALLNFYLYVLITTAVF 216
Cdd:CHL00049 274 FSSNEWHLLLEI-LAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMNLGTFAC 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 597709685 217 LTLNSIKT-----LKLATLmttWTKTPTLSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 353 IVLFGLRTgtdniRDYAGL---YTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.19e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 77.78 E-value: 1.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 50 PRAIEAATKYFLVQAAASALILF---------------SSMTNAWQTGQwditQLTCPVSCLILTSAIAMKLGLAPFHFW 114
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgssllyglsggstqlSAIALALITSP----SLGLALALVFVIAGIAFKISAVPFHQW 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 115 FPEVLQGTPLTTGLLLST-------AMKLPPMTLFFMTSQSLNPTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHL 187
Cdd:PRK02504 233 TPDVYEGSPTPVVAFLSVgskaagfALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQA 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 188 GWMAIIII------YSPKLALLNFYLYVLITTAVFLTLNSIKT--LKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTG 259
Cdd:PRK02504 313 GFVMIGLVagteagYASMVFYLLAYLFMNLGAFACVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAG 392
|
....
gi 597709685 260 FLPK 263
Cdd:PRK02504 393 FFGK 396
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
6.55e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 66.12 E-value: 6.55e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 50 PRAIEAATKYFLVQAAASALILFSSMTNAWQTG------QWDITQLTCPVSCLILTS---AIAMKLGLAPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtfdllELLNLPLPFGVQTWLFLAffiAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 120 QGTPLTTGLLLSTAMKLPP-------MTLFFMTSQSLNPtLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTygflrfnLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 193 IIIYSPKLALLNFYLYV----LITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
....
gi 597709685 265 LIIQ 268
Cdd:TIGR01972 391 LILL 394
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-283 |
7.78e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 65.87 E-value: 7.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 49 HPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQW-----DITQLTCPVS-----CLILTSAIAMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTaqlllFLAFFIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 119 LQGTPLTTGLLLSTAM-KLP-------PMTLFFMTSQSLNPtLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWM 190
Cdd:COG1008 236 HVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAP-LLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 191 AIIIIYSPKLALLNFYLYV----LITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLP 262
Cdd:COG1008 315 LLGIFALNPLGLQGAVLQMvshgLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
|
250 260
....*....|....*....|.
gi 597709685 263 KWLIIQELTKQemAPAATIIA 283
Cdd:COG1008 395 EFLVLLGAFQV--NPWLAILA 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.23e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.81 E-value: 8.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASALILFS---------SMTNAWQTGQWDIT-QLTCPVSCLILTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENpTVVAKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 102 IAMKLGLAPFHFWFPEVLQGTP--LTTGLLLSTAMKLPPM--TLFFMTSQSLNPT----LLIAMALLSAALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 174 QTRKILAFSSISHLGWM------AIIIIYSPKLA-------------LLNFYLY----VLITTAVFLTLNSIKTLKLATL 230
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggiyhIVNHALYkallFLTAGAVIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|....*.
gi 597709685 231 MTTWTKTptlSATLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKT---TIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-282 |
4.07e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 60.66 E-value: 4.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFS-SMTNAwQTGQWDITQL--------TCPVSCLILTSAIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLagalaenpTVVTAFGFVLLALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 104 MKLGLAPFHFWFPEVLQGTPLTTGLLLS-TAMKLPPMTLF----------FMTSQSLNpTLLIAMALLSAALGGWMGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIriyftvfggdFRFALGLG-WLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 173 TQTRKILAFSSISHLGWMAIIIIYSPKLALLN--FYL--YVLITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATL 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAglLHLlhHALMKGALFLAAGAIevtyGTRRLSELSGLGRRMPLTAAAF 372
|
250 260 270
....*....|....*....|....*....|....*...
gi 597709685 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATII 282
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVL 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-275 |
1.29e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.24 E-value: 1.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 2 NPQAKLIFISSLLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASALILFSSMTNAWQT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 82 GQWDITQL-----------TCPVSCLILTSAIAMKLGLAPFHFWFPEVLQGTPLT--------------TGLLLSTAMkL 136
Cdd:PRK08668 175 GTFDFADIsqglindtstgFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSfsavlsgqlsklgaYGFLLVLYV-L 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 137 PPMTLF-----FMTSQSLNpTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKL----ALLNFYL 207
Cdd:PRK08668 254 PGTKLFsefgtYRGVPLFN-YILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLgfagGLFHVFN 332
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 597709685 208 YVLITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:PRK08668 333 HALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-263 |
4.17e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 58.01 E-value: 4.17e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 96 LILTSAIAmKLGLAPFHFWFPEVLQG-TPLTtGLLLSTAM---------KLPPMtlfFMTSQSLNPTLLIaMALLSAALG 165
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAApTPVS-AYLHAAAMvkagiylvaRLAPG---FADVPVWRPTVLV-LGLATMLLG 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 166 GWMGLNQTQTRKILAFSSISHLGWMAIII-IYSPKLALLNFYLYV---LITTAVFLTLNSIK----TLKLATLMTTWTKT 237
Cdd:PRK12644 282 GWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGIIDhstgTRDIRKLSGLGRRQ 361
|
170 180
....*....|....*....|....*.
gi 597709685 238 PTLSATLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 362 PVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-268 |
6.82e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.86 E-value: 6.82e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 8 IFISSLLLgtaiTTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 78 AWQTGQWdiTQLTCPVSCL---ILTSAIAM-------KLGLAPFHFWFPEVLQGTP-----LTTGLLLSTAMkLPPMTLF 142
Cdd:PRK06458 192 GEMAILW--TELLKHASLLdptLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPspvsaLLSGVLLNVAL-YAVLRYY 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 143 FMTSQSLNP----TLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLA----LLNFYLYVLITTA 214
Cdd:PRK06458 269 ILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGifaaLLHMLNHSLTKSA 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 597709685 215 VFLT----LNSIKTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 349 IFFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
5.54e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.97 E-value: 5.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFS-----------SMTNAWQTGQWDITQLTCPVSCLILTSA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyaitgtlNMGDMFLIIQDLPTNRAIQIGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 102 IAMKLGLAPFHFWFPEVLQGTPLTTGLLLS-TAMKLPPMTL-----------FFMTSQSLNpTLLIAMALLSAALGGWMG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvfkanFVFTTLPFN-NVFMILAALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 170 LNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYV----LITTAVFLTLNSIK----TLKLATLMTTWTKTPTLS 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 597709685 242 ATLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
7.75e-08 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 53.89 E-value: 7.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 29 AWtglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDI------------TQLTCPVSCL 96
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgilhsdvwaekPGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 97 ILTSAIAmKLGLAPFHFWFPEVLQG-TPLTTGLLLSTAMKLPPMTLF-FMTSQSLNPT---LLIAMALLSAALGGWMGLN 171
Cdd:PRK12650 214 IAVAAFT-KSAQFPFHFWLPEAMAAiTPVSAFLHAAAVVKAGIYLLLrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 172 QTQTRKILAFSSISHLGWM-AIIIIYSP---KLALLNFYLYVLITTAVFLTLNSIK----TLKLATLMTTWTKTPTLSAT 243
Cdd:PRK12650 293 KTDLKKLTAYSTVSQLGWIvATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVS 372
|
250 260
....*....|....*....|
gi 597709685 244 LMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 373 VTIAALSMAAVPPLFGFVSK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.03e-07 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 51.74 E-value: 3.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 50 PRAIEAATKYFLVQAAASALILFSSMT----NAWQTGQWDITQL-TCPVSC-------LILTSAIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlNLPLPPgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 118 VLQ-----GTPLTTGLLLSTA------MKLPpmtLFFMTSQSLNPtLLIAMALLSAALGGWMGLNQTQTRKILAFSSISH 186
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEFAP-IIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 187 LGWMAIIIIYSPKLALLNFYLYV----LITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLT 258
Cdd:PRK05846 313 MGFVTLGIFAGNQLGIQGAIFQMishgLSSAALFLLVGVLydrlHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
|
....*....
gi 597709685 259 GFLPKWLII 267
Cdd:PRK05846 393 GFVGEFLIL 401
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-283 |
4.89e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.31 E-value: 4.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 23 SNHWIMAWTGLEINTLAILPLISKSHH-PRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQL------------ 89
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaaptilsspl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 90 TCPVSCLILTSAIAmKLGLAPFHFWFPEVLQG-TPLTTgLLLSTAM---------KLPPmtLFFMTSQSLnpTLLIAMAL 159
Cdd:COG1009 210 LTLILLLLLLGAFG-KSAQFPLHFWLPDAMEGpTPVSA-LLHAATMvkagvyllaRLSP--LFALSPVWL--TVVAIIGA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 160 LSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFylyvLITTAVF---LTLNS---IKTL------KL 227
Cdd:COG1009 284 ITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFH----LLTHAFFkalLFLGAgsvIHATgtrdirKM 359
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 597709685 228 ATLmttWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMAPAATIIA 283
Cdd:COG1009 360 GGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLAVA 413
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
1.41e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.64 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQ-----LTCPVSCLILTSAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 109 A------PFHFWFPEVL-QGTPLTTGLLLS------TAMKLPPMTLFFMTSQ-SLNPTLLIAMALLSAALGGWMGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYaKAKPFGSALLQTfskfvlVALMLVIFKLFGGLSYfPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 175 TRKILAFSSISHLGWMAIIII----YSPKLALLNFYLYVLITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 597709685 247 TLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
3.00e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 48.60 E-value: 3.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 13 LLLGTAITTSSNHWIMAWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------SALILFSSMTNAWQTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 87 TQLTCPV----------SCLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 153 ----LLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVLITTAVFLTL--------N 220
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 597709685 221 SIKTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-283 |
4.47e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 48.38 E-value: 4.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 110 PFHFWFPEVLQG-TPLTTGLLLSTAMKLPPMTLffmtsQSLNP---------TLLIAMALLSAALGGWMGLNQTQTRKIL 179
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMVKAGIYLL-----ARLNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 180 AFSSISHLGWMAIIIIYSPKLALLNFYLYV----LITTAVFLTLNSIK-------TLKLATLmttWTKTPTLSATLMLTL 248
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAA 364
|
170 180 190
....*....|....*....|....*....|....*
gi 597709685 249 LSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:PRK12647 365 LSMAGLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
9-270 |
4.62e-06 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 48.25 E-value: 4.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 9 FISSLLLGTAITTSSNH--WIMAWTGLEINTLAILPLISKSHHPraieaATKYFLVQAAASALILFSSMTNAWQTGQWDI 86
Cdd:PRK06459 78 YILTILGMAIVLTSDNYllFLAGWEIMTIPSYVAIALTKKNKRP-----AFVFMAFGELSTVLILAGFAWAFIISGTTNF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 87 TQLTCPVSCLILTSAIAMKLGLAPFHF--WFPEVLQGTPLTTGLLLSTAMKLppMTLFFMTS-QSLNPT--------LLI 155
Cdd:PRK06459 153 SYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTL--MGVYGILKmTILTQTipigyfglTIL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 156 AMALLSAALGGWMGLNQTQTRKILAFSSISHLGWM-----AIIIIYSPKLALLNFYLYVLIT---------TAVFLTLNS 221
Cdd:PRK06459 231 AIGAFSILFGALYAYVSENVKGLLAFSTIENNGAIlvalgLYMVTKQLITSIEHFSLITVILysfahsvakTGLFLSSGL 310
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 597709685 222 IKTLKLATLMTTWTKTPTLSATLMLtlLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 311 QEKQSITYSKKIRNRWIELGLTLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
5.30e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.02 E-value: 5.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 103 AMKLGLAPFHFWFPEVLQGTP---------LTTGLLLSTAMKLppMTLFFMTSQSLNPTLLIAMALLSAALGGWMGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPiaiaalfgaLLTKVGVYAIART--FTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 174 QTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLY----VLITTAVFL----TLNSIKTLKLATLMTTWTKTPTLSATLM 245
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYlihdMIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFF 377
|
170 180
....*....|....*....|...
gi 597709685 246 LTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 378 IAALSLAGIPPLSGFYGKFFIVE 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
7.94e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 47.25 E-value: 7.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQLTC--PVSCLILTSAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 111 FHFWFPEVLQGTPLTTGLLLSTA-MKLPPMTLFFMTSQSLNPTLLIAM-ALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVvVKAGVFPLVRCALDVPGLDLIVRIfGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 189 WmaiiIIYSPKLALLNFYLYVLITTAVFLTLNSIKTLKLATLMTTWTKTPTLSAtLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07234 283 F----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIP-LTMASFSIAGFPLLAGFVSKVLTLK 357
|
...
gi 597709685 269 ELT 271
Cdd:PRK07234 358 NLL 360
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-270 |
1.25e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 47.03 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 55 AATKYFLVQAAASALILFSSMTNAWQTGQWDITQLTCP-----VSCLILTSAIAMKLGLAPFHFWFPEVLQGTP-----L 124
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPsnvsaL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 125 TTGLLLSTAM-KLPPMTLFFMTSQSLNPTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLG--------WMAIIII 195
Cdd:PRK08667 243 MSGVMLKVAVyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 196 YSPKLALLNF-------YLYVLITTAVFLTLNSI----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK08667 323 GLDTLALLALggalfhsLNHALFKSLLFLTAGSVvhatGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASEL 402
|
....*.
gi 597709685 265 LIIQEL 270
Cdd:PRK08667 403 LLYESF 408
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-268 |
1.52e-05 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 46.48 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 96 LILTSAIAMKLGLAPFhFWFPEVLQGTPLTTGLLLSTAMK-------LPPMTLFFMTSQSLNPTLLIAMALLSAALGGWM 168
Cdd:PRK12663 211 LLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALFAALLTkvgiyalIRVFTLLFPQERELLHPLLATMAAITMVIGALG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 169 GLNQTQTRKILAFSSISHLGWMAIiiiyspKLALLN--------FYLY--VLITTAVFLTLNSIKTL----KLATLMTTW 234
Cdd:PRK12663 290 ALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVhdMVVKTALFLIAGSLVRLtgyrSLQYLGGLY 363
|
170 180 190
....*....|....*....|....*....|....
gi 597709685 235 TKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 364 RKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
1.74e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.47 E-value: 1.74e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 597709685 295 RLAYCATITLPPHTTNHMKLWHTNKPINT-LVAILATMSITLLPISP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
3.00e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 45.73 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 96 LILTSAIAMKLGLAPFHFWFPEVLQGTP-----LTTGLLLST---AMkLPPMTLFFmTSQSLNpTLLIAMALLSAALGGW 167
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPapvtaVFAGLLTKVgvyAI-IRTHTLLF-PGGGLD-TLLMVVALLTMVVGIL 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 168 MGLNQTQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYV----LITTAVFLTLNSIK----TLKLATLMTTWTKTPT 239
Cdd:PRK12665 290 GAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRRLGGLAKASPL 369
|
170 180
....*....|....*....|....*....
gi 597709685 240 LSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-268 |
5.31e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.70 E-value: 5.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 55 AATKYFLVQAAASALILFSSMTNAWQTGQWD------ITQLTCPVSCLILTSAI----AMKLGLAPFHFWFPEV-LQGTP 123
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAyTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 124 LTTGLLLSTAMKLPP-------MTLFFMTSQSLNPTLLIaMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIIIY 196
Cdd:PRK07363 238 AVAILLGGVLAKLGTygllrfgLQLFPQTWSLVAPGLAI-IGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 197 SPKLALLNFYLYVL---ITTAVFLTLNSIKTLKLAT--------LMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWL 265
Cdd:PRK07363 317 GTQLSLLGAVAQMIshgLILALLFHLVGIVERKVGTrdldvlngLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEFI 396
|
...
gi 597709685 266 IIQ 268
Cdd:PRK07363 397 VFQ 399
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
6.06e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 44.69 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 55 AATKYFLVQAAASALILFSSMTNAWQTG--QWDITQL---TCPVSCLILTSA-----IAMKLGLAPFHFWFPE--VLQGT 122
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDahVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 123 PLTTgLLLSTAMKLPP-------MTLFFMTSQSLNPTLLIaMALLSAALGGWMGLNQTQTRKILAFSSISHLGWMAIIII 195
Cdd:PRK06473 238 PVSV-LLAGVLLKLGTygllrfgVGLFPEAWVYLAPWLAT-WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 196 YSPKLALLNFYLYV----LITTAVFLTL-------NSIKTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVFQMishgLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
..
gi 597709685 265 LI 266
Cdd:PRK06473 396 LV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.25e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.76 E-value: 1.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 101 AIAMKLGLAPFHFWFPEVLQGTPLTTGLLLS-TAMKLPPMTLFFMT-------SQSLNPTLlIAMALLSAALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAgILLKLGGYGLVRLSwpilplgAQNLAPAV-IAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 173 TQTRKILAFSSISHLGWMAIIIIYSPKLALLNFYLYVL---ITTAVFLTLNSIKTLKLATLMTTWTK-----TPTLSATL 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLahgIVSSLLFILVTILYDRHHTRLIKYYRglsitMPIWGTIM 397
|
170 180
....*....|....*....|...
gi 597709685 245 MLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYLSI 420
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
92-268 |
2.48e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.02 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 92 PVSCLILTSAI--AMKLGLapfHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLF---FMTSQSLNPTLLIA--MALLSAAL 164
Cdd:MTH00032 226 IIGILLLIGCIgkSAQLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsFPLFEKAPLTLLIItiFGALTAFF 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 165 GGWMGLNQTQTRKILAFSSISHLGWMAIIIIY--SPKLALLNFYLYVLITTAVFLTLNSI---------KTLKLATLMTT 233
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS 382
|
170 180 190
....*....|....*....|....*....|....*
gi 597709685 234 WTKTPTLsatLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 383 IPFTYTM---MLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
143-268 |
4.90e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 42.06 E-value: 4.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 143 FMTSQSLNPTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLG-WMAIIIIYSPKLALLNFYLYVLITTAVFLTLNS 221
Cdd:MTH00207 235 FLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGS 314
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 597709685 222 I-----KTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 315 LihshhHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-278 |
1.55e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 107 GLAPFHFWFPEVLQGTPLTTGLLLSTA-MKLPPMTLFFMTSQSLNPTL-----LIAMALLSAALGGWMGLNQTQTRKILA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 181 FSSISHLGWMAI--------IIIYSPKLALLNFY--LYVLIT-----TAVFLTLNSI----KTLKLATLMTTWTKTPTLS 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNhslfkSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|....*..
gi 597709685 242 ATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPA 278
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSGA 391
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
2.03e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 40.12 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 110 PFHFWFPEVLQG-TPLTTGLLLSTAMKLPPMTLFFMTS----QSLNPTLLIAMALLSAALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAApTPVSAYLHSATMVKAGIFLLFRFTPllglSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 185 SHLGW-MAII-----IIYSPKLALLNFYLYVLIT------------TAVFLTLNSIK----TLKLATLMTTWTKTPTLSA 242
Cdd:PRK12646 308 SQLGMiMAMVgigggYAQHQQDAIASIYVFVLFAalfhlmnhaifkCALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 597709685 243 TLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-268 |
2.90e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.29 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 95 CLILTSAIAMKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQ--SLNPTLLIAMAL---LSAALGGWMG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALIIVTIvgsLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 170 LNQTQTRKILAFSSISHLGWMAIII-IYSPKLALLNFYLYVLITTAVFLTLNSI--------KTLKLATLMTTwtkTPTL 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPLT 369
|
170 180
....*....|....*....|....*...
gi 597709685 241 SATLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00020 370 YIFFLIGSLSLMGFPYLTGFYSKDLILE 397
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
3.87e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.04 E-value: 3.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 48 HHPRAIEAATKYFLVQAAASALILFSSMTNAWQTGQWDITQL--------TCPVSCLILTSAIAMKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselieNIKGHPLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 114 WFPEVLQGTPLTTGLLLSTAMKLPPMTLFFMTSQSLNPT-----LLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 189 WMAIIIIYSPK------LALLNFYLYVLITTAVFLTL------NSIKTLKLATLMTTWTKTPTLSATLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLLNHATFKACLFLvagivaHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 597709685 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
104-272 |
9.05e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 37.16 E-value: 9.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 104 MKLGLAPFHFWFPEVLQGTPLTTGLLLSTAMKLPPMtLFFMTSQSLNPTLLIAMALLSAALGGWMGLNqtqTRKILAFSS 183
Cdd:MTH00091 69 MKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFL-LVLLQFFSKNFFFLLLFGLLICFFQMFLLKS---YKNLLILSS 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 184 ISHLGWMAIIIIYSpklaLLN-FYLYVLITTAVFLtlnsiktlklatLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLP 262
Cdd:MTH00091 145 TESFNWLILSFFFS----FFNvFFLFFYYFLLMLF------------LIPKFNNVNKLNFVSWETLLVFMNLPFSVTFFV 208
|
170
....*....|
gi 597709685 263 KWLIIQELTK 272
Cdd:MTH00091 209 KIFSLSEILK 218
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-283 |
9.99e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 37.49 E-value: 9.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 2 NPQAKLIFISSLLLGTAITTSSNHWIMaWTGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASAL-------ILFSS 74
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSDLFTM-FVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLlflpaviLIYTK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 75 MTNAWQTGQWDITQLTCPVSCLILTSAIAmKLGLAPFHFWFPE-VLQGTPLT----------TGLLLSTAMKLPPMTLFF 143
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIA-KTAIFPVHSWLPAaMVAHYPVSallhavivvkTGLFCIYKILLYIFGLSY 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 597709685 144 MTSQSLNPTLLIAMALLSAALGGWMGLNQTQTRKILAFSSISHLGW--MAIIIIYSPKLALLNFYL--YVLITTAVFLTL 219
Cdd:PRK06589 273 LQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSM 352
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 597709685 220 NSIKTLK----LATLMTTWTKTPTLSATLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMAPAATIIA 283
Cdd:PRK06589 353 GSIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420
|
|
| |
