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Conserved domains on  [gi|620968808|ref|XP_007658949|]
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uncharacterized protein C4orf36 homolog [Ornithorhynchus anatinus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4522 super family cl20898
Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. ...
 1-116 1.19e-44

Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. This family of proteins is found in mammals. In human this protein is known as C4orf36.


The actual alignment was detected with superfamily member pfam15022:

Pssm-ID: 434399  Cd Length: 117  Bit Score: 142.64  E-value: 1.19e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 620968808    1 MAYGLPRKNTVKWILRRSCYTVQEPWELAALTRILFENLLKIKVPLFDDIKHASLSKLKPVKTVKHEQPPSAQTLAMERE 80
Cdd:pfam15022   1 MAYGLPRKNTVKTILRGSCYNVQEPWDLALLTKTWYTNLANIRLPFLGEIAFGSPLKLTKCKTIKEGLLPSAESIKLERE 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 620968808   81 YEQKRLKEIELRNKMAEQIQSLLKGKRGGLRKPLPP 116
Cdd:pfam15022  81 YEMKRLTKLKCQENASEEIQLSLRERKVGLRRPLPP 116
 
Name Accession Description Interval E-value
DUF4522 pfam15022
Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. ...
 1-116 1.19e-44

Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. This family of proteins is found in mammals. In human this protein is known as C4orf36.


Pssm-ID: 434399  Cd Length: 117  Bit Score: 142.64  E-value: 1.19e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 620968808    1 MAYGLPRKNTVKWILRRSCYTVQEPWELAALTRILFENLLKIKVPLFDDIKHASLSKLKPVKTVKHEQPPSAQTLAMERE 80
Cdd:pfam15022   1 MAYGLPRKNTVKTILRGSCYNVQEPWDLALLTKTWYTNLANIRLPFLGEIAFGSPLKLTKCKTIKEGLLPSAESIKLERE 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 620968808   81 YEQKRLKEIELRNKMAEQIQSLLKGKRGGLRKPLPP 116
Cdd:pfam15022  81 YEMKRLTKLKCQENASEEIQLSLRERKVGLRRPLPP 116
 
Name Accession Description Interval E-value
DUF4522 pfam15022
Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. ...
 1-116 1.19e-44

Protein of unknown function (DUF4522); This family of proteins is functionally uncharacterized. This family of proteins is found in mammals. In human this protein is known as C4orf36.


Pssm-ID: 434399  Cd Length: 117  Bit Score: 142.64  E-value: 1.19e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 620968808    1 MAYGLPRKNTVKWILRRSCYTVQEPWELAALTRILFENLLKIKVPLFDDIKHASLSKLKPVKTVKHEQPPSAQTLAMERE 80
Cdd:pfam15022   1 MAYGLPRKNTVKTILRGSCYNVQEPWDLALLTKTWYTNLANIRLPFLGEIAFGSPLKLTKCKTIKEGLLPSAESIKLERE 80

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 620968808   81 YEQKRLKEIELRNKMAEQIQSLLKGKRGGLRKPLPP 116
Cdd:pfam15022  81 YEMKRLTKLKCQENASEEIQLSLRERKVGLRRPLPP 116
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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