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Conserved domains on  [gi|62511215|sp|Q8R0L1|]
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RecName: Full=Signal-transducing adaptor protein 2; Short=STAP-2

Protein Classification

PH-like and SH2_STAP2 domain-containing protein( domain architecture ID 10351463)

PH-like and SH2_STAP2 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SH2_STAP2 cd10404
Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a ...
151-247 3.28e-60

Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a signal-transducing adaptor protein. It is composed of a Pleckstrin homology (PH) and SH2 domains along with several tyrosine phosphorylation sites. The STAP2 protein is the substrate of breast tumor kinase, an Src-type non-receptor tyrosine kinase that mediates the interactions linking proteins involved in signal transduction pathways. STAP2 has alternative splicing variants. STAP2 has been shown to interact with tyrosine-protein kinase 6 (PTK6). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


:

Pssm-ID: 198267  Cd Length: 97  Bit Score: 190.49  E-value: 3.28e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKDSVSVTTRQILNGSPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd10404   1 PSCFLKVSRLEAQLLLERYPECGNLLLRPGGDGADGVSVTTRQMLNGTPVVRHYKVKREGPKYVIDVEEPFSCTSLDAVV 80
                        90
                ....*....|....*..
gi 62511215 231 NYFVTHTKRALVPFLLD 247
Cdd:cd10404  81 NYFVSHTKKALVPFLLD 97
PH-like super family cl17171
Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like ...
9-135 1.50e-57

Pleckstrin homology-like domain; The PH-like family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.


The actual alignment was detected with superfamily member cd13268:

Pssm-ID: 473070  Cd Length: 127  Bit Score: 184.59  E-value: 1.50e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215   9 RGPKLKGAPPSHYYESFLEKKGPCDQDYRKFWAGLQGLAICFYNSNRDLQPLEKLDLRLFSKLRDEALLGSSRDTAyHFS 88
Cdd:cd13268   1 RQERPKIQLPPCYYEGFLEKKRPKDREYRKLWTELCGTTLFFYNDKKDTQYVEKLDLSALESLTDEISRGRNLDAA-RFT 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 62511215  89 LVLRDQEVKFKVESLESCEMWKGFILTVVELRVPSNLTLLPGHLYMM 135
Cdd:cd13268  80 LVLKDEEVKFKAENLESREEWKGFILTVTELSVPTSLTLLPGQIHML 126
 
Name Accession Description Interval E-value
SH2_STAP2 cd10404
Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a ...
151-247 3.28e-60

Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a signal-transducing adaptor protein. It is composed of a Pleckstrin homology (PH) and SH2 domains along with several tyrosine phosphorylation sites. The STAP2 protein is the substrate of breast tumor kinase, an Src-type non-receptor tyrosine kinase that mediates the interactions linking proteins involved in signal transduction pathways. STAP2 has alternative splicing variants. STAP2 has been shown to interact with tyrosine-protein kinase 6 (PTK6). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198267  Cd Length: 97  Bit Score: 190.49  E-value: 3.28e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKDSVSVTTRQILNGSPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd10404   1 PSCFLKVSRLEAQLLLERYPECGNLLLRPGGDGADGVSVTTRQMLNGTPVVRHYKVKREGPKYVIDVEEPFSCTSLDAVV 80
                        90
                ....*....|....*..
gi 62511215 231 NYFVTHTKRALVPFLLD 247
Cdd:cd10404  81 NYFVSHTKKALVPFLLD 97
PH_Brdg1 cd13268
BCR downstream signaling 1 Pleckstrin homology (PH) domain; Brdg1 is thought to function as a ...
9-135 1.50e-57

BCR downstream signaling 1 Pleckstrin homology (PH) domain; Brdg1 is thought to function as a docking protein acting downstream of Tec, a protein tyrosine kinases (PTK), in B-cell antigen receptor (BCR) signaling. BRDG1 contains a proline-rich (PR) motif which is thought to bind SH3 or WW domains, a PH domain, and multiple tyrosine residues which are potential target sites for SH2 domains. Since PH domains bind phospholipids it is thought to be involved in the tethering of Tec and BRDG1 to the cell membrane.Tec and Pyk2, but not Btk, Bmx, Lyn, Syk, or c-Abl, induces phosphorylation of BRDG1 on tyrosine residues. Efficient phosphorylation requires both the PH and SH2 domains of BRDG1 and the kinase domain of Tec. The overexpression of BRDG1 increases theBCR-mediated activation of cAMP-response element binding protein (CREB). Phosphorylated BRDG1 is hypothesized to recruit CREB either directly or through its recruitment of downstream effectors which then recruit CREB. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270088  Cd Length: 127  Bit Score: 184.59  E-value: 1.50e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215   9 RGPKLKGAPPSHYYESFLEKKGPCDQDYRKFWAGLQGLAICFYNSNRDLQPLEKLDLRLFSKLRDEALLGSSRDTAyHFS 88
Cdd:cd13268   1 RQERPKIQLPPCYYEGFLEKKRPKDREYRKLWTELCGTTLFFYNDKKDTQYVEKLDLSALESLTDEISRGRNLDAA-RFT 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 62511215  89 LVLRDQEVKFKVESLESCEMWKGFILTVVELRVPSNLTLLPGHLYMM 135
Cdd:cd13268  80 LVLKDEEVKFKAENLESREEWKGFILTVTELSVPTSLTLLPGQIHML 126
 
Name Accession Description Interval E-value
SH2_STAP2 cd10404
Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a ...
151-247 3.28e-60

Src homology 2 domain found in Signal-transducing adaptor protein 2 (STAP2); STAP2 is a signal-transducing adaptor protein. It is composed of a Pleckstrin homology (PH) and SH2 domains along with several tyrosine phosphorylation sites. The STAP2 protein is the substrate of breast tumor kinase, an Src-type non-receptor tyrosine kinase that mediates the interactions linking proteins involved in signal transduction pathways. STAP2 has alternative splicing variants. STAP2 has been shown to interact with tyrosine-protein kinase 6 (PTK6). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198267  Cd Length: 97  Bit Score: 190.49  E-value: 3.28e-60
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKDSVSVTTRQILNGSPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd10404   1 PSCFLKVSRLEAQLLLERYPECGNLLLRPGGDGADGVSVTTRQMLNGTPVVRHYKVKREGPKYVIDVEEPFSCTSLDAVV 80
                        90
                ....*....|....*..
gi 62511215 231 NYFVTHTKRALVPFLLD 247
Cdd:cd10404  81 NYFVSHTKKALVPFLLD 97
PH_Brdg1 cd13268
BCR downstream signaling 1 Pleckstrin homology (PH) domain; Brdg1 is thought to function as a ...
9-135 1.50e-57

BCR downstream signaling 1 Pleckstrin homology (PH) domain; Brdg1 is thought to function as a docking protein acting downstream of Tec, a protein tyrosine kinases (PTK), in B-cell antigen receptor (BCR) signaling. BRDG1 contains a proline-rich (PR) motif which is thought to bind SH3 or WW domains, a PH domain, and multiple tyrosine residues which are potential target sites for SH2 domains. Since PH domains bind phospholipids it is thought to be involved in the tethering of Tec and BRDG1 to the cell membrane.Tec and Pyk2, but not Btk, Bmx, Lyn, Syk, or c-Abl, induces phosphorylation of BRDG1 on tyrosine residues. Efficient phosphorylation requires both the PH and SH2 domains of BRDG1 and the kinase domain of Tec. The overexpression of BRDG1 increases theBCR-mediated activation of cAMP-response element binding protein (CREB). Phosphorylated BRDG1 is hypothesized to recruit CREB either directly or through its recruitment of downstream effectors which then recruit CREB. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270088  Cd Length: 127  Bit Score: 184.59  E-value: 1.50e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215   9 RGPKLKGAPPSHYYESFLEKKGPCDQDYRKFWAGLQGLAICFYNSNRDLQPLEKLDLRLFSKLRDEALLGSSRDTAyHFS 88
Cdd:cd13268   1 RQERPKIQLPPCYYEGFLEKKRPKDREYRKLWTELCGTTLFFYNDKKDTQYVEKLDLSALESLTDEISRGRNLDAA-RFT 79
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*..
gi 62511215  89 LVLRDQEVKFKVESLESCEMWKGFILTVVELRVPSNLTLLPGHLYMM 135
Cdd:cd13268  80 LVLKDEEVKFKAENLESREEWKGFILTVTELSVPTSLTLLPGQIHML 126
SH2_STAP_family cd09939
Src homology 2 domain found in Signal-transducing adaptor protein (STAP) family; STAP1 and ...
151-246 1.40e-46

Src homology 2 domain found in Signal-transducing adaptor protein (STAP) family; STAP1 and STAP2 are signal-transducing adaptor proteins. They are composed of a Pleckstrin homology (PH) and SH2 domains along with several tyrosine phosphorylation sites. STAP-1 is an ortholog of BRDG1 (BCR downstream signaling 1). STAP1 protein functions as a docking protein acting downstream of Tec tyrosine kinase in B cell antigen receptor signaling. The protein is phosphorylated by Tec and participates in a positive feedback loop, increasing Tec activity. STAP1 has been shown to interact with C19orf2, an unconventional prefoldin RPB5 interactor. The STAP2 protein is the substrate of breast tumor kinase, an Src-type non-receptor tyrosine kinase that mediates the interactions linking proteins involved in signal transduction pathways. STAP2 has alternative splicing variants. STAP2 has been shown to interact with tyrosine-protein kinase 6 (PTK6). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198192  Cd Length: 94  Bit Score: 155.01  E-value: 1.40e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGkDSVSVTTRQILNGsPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd09939   1 PACFYTVSRKEATELLERNPSCGNMLLRPGSDS-RNYSVTTRQEINI-PVIRHYKVMSVGQNYTIELEKPVTCPNLFSVI 78
                        90
                ....*....|....*.
gi 62511215 231 NYFVTHTKRALVPFLL 246
Cdd:cd09939  79 NYFVKETRGNLRPFIL 94
SH2_STAP1 cd10403
Src homology 2 domain found in Signal-transducing adaptor protein 1 (STAP1); STAP1 is a ...
151-246 2.31e-35

Src homology 2 domain found in Signal-transducing adaptor protein 1 (STAP1); STAP1 is a signal-transducing adaptor protein. It is composed of a Pleckstrin homology (PH) and SH2 domains along with several tyrosine phosphorylation sites. STAP-1 is an ortholog of BRDG1 (BCR downstream signaling 1). STAP1 protein functions as a docking protein acting downstream of Tec tyrosine kinase in B cell antigen receptor signaling. The protein is phosphorylated by Tec and participates in a positive feedback loop, increasing Tec activity. STAP1 has been shown to interact with C19orf2, an unconventional prefoldin RPB5 interactor. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198266  Cd Length: 94  Bit Score: 125.60  E-value: 2.31e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKdSVSVTTRQILNGsPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd10403   1 PACFYKVSRKEAEELLERNPSCGNMLLRPGSDSS-NYSITTRQEINK-PRIKHYRVMSRGQGYTIELEKPVTCPTLHDVI 78
                        90
                ....*....|....*.
gi 62511215 231 NYFVTHTKRALVPFLL 246
Cdd:cd10403  79 NYFVEKTRGNLRPFIM 94
SH2_C-SH2_PLC_gamma_like cd09932
C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma; Phospholipase C gamma is a ...
151-236 6.25e-09

C-terminal Src homology 2 (C-SH2) domain in Phospholipase C gamma; Phospholipase C gamma is a signaling molecule that is recruited to the C-terminal tail of the receptor upon autophosphorylation of a highly conserved tyrosine. PLCgamma is composed of a Pleckstrin homology (PH) domain followed by an elongation factor (EF) domain, 2 catalytic regions of PLC domains that flank 2 tandem SH2 domains (N-SH2, C-SH2), and ending with a SH3 domain and C2 domain. N-SH2 SH2 domain-mediated interactions represent a crucial step in transmembrane signaling by receptor tyrosine kinases. SH2 domains recognize phosphotyrosine (pY) in the context of particular sequence motifs in receptor phosphorylation sites. Both N-SH2 and C-SH2 have a very similar binding affinity to pY. But in growth factor stimulated cells these domains bind to different target proteins. N-SH2 binds to pY containing sites in the C-terminal tails of tyrosine kinases and other receptors. Recently it has been shown that this interaction is mediated by phosphorylation-independent interactions between a secondary binding site found exclusively on the N-SH2 domain and a region of the FGFR1 tyrosine kinase domain. This secondary site on the SH2 cooperates with the canonical pY site to regulate selectivity in mediating a specific cellular process. C-SH2 binds to an intramolecular site on PLCgamma itself which allows it to hydrolyze phosphatidylinositol-4,5-bisphosphate into diacylglycerol and inositol triphosphate. These then activate protein kinase C and release calcium. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198186  Cd Length: 104  Bit Score: 53.04  E-value: 6.25e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPECGNLLLRPGGDGKDSVSVTTRqiLNGSpvVKHYKVKRAGSKYVIDVEDPFscpSLEAVV 230
Cdd:cd09932   5 EWFHANLTREQAEEMLMRVPRDGAFLVRPSETDPNSFAISFR--AEGK--IKHCRIKQEGRLFVIGTSQFE---SLVELV 77

                ....*.
gi 62511215 231 NYFVTH 236
Cdd:cd09932  78 SYYEKH 83
SH2 cd00173
Src homology 2 (SH2) domain; In general, SH2 domains are involved in signal transduction; they ...
151-233 4.13e-08

Src homology 2 (SH2) domain; In general, SH2 domains are involved in signal transduction; they bind pTyr-containing polypeptide ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites. They are present in a wide array of proteins including: adaptor proteins (Nck1, Crk, Grb2), scaffolds (Slp76, Shc, Dapp1), kinases (Src, Syk, Fps, Tec), phosphatases (Shp-1, Shp-2), transcription factors (STAT1), Ras signaling molecules (Ras-Gap), ubiquitination factors (c-Cbl), cytoskeleton regulators (Tensin), signal regulators (SAP), and phospholipid second messengers (PLCgamma), amongst others.


Pssm-ID: 198173 [Multi-domain]  Cd Length: 79  Bit Score: 50.15  E-value: 4.13e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEAQLLLERYPEcGNLLLRPGGDGKDSVSVTtrqILNGSPVVKHYKVKRAGSKYVIDVEDPFSCPSLEAVV 230
Cdd:cd00173   1 PWFHGSISREEAERLLRGKPD-GTFLVRESSSEPGDYVLS---VRSGDGKVKHYLIERNEGGYYLLGGSGRTFPSLPELV 76

                ...
gi 62511215 231 NYF 233
Cdd:cd00173  77 EHY 79
SH2_Srm cd10360
Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine ...
151-233 5.31e-05

Src homology 2 (SH2) domain found in Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristoylation sites (srm); Srm is a nonreceptor protein kinase that has two SH2 domains, a SH3 domain, and a kinase domain with a tyrosine residue for autophosphorylation. However it lacks an N-terminal glycine for myristoylation and a C-terminal tyrosine which suppresses kinase activity when phosphorylated. Srm is most similar to members of the Tec family who other members include: Tec, Btk/Emb, and Itk/Tsk/Emt. However Srm differs in its N-terminal unique domain it being much smaller than in the Tec family and is closer to Src. Srm is thought to be a new family of nonreceptor tyrosine kinases that may be redundant in function. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198223  Cd Length: 79  Bit Score: 41.48  E-value: 5.31e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEA-QLLLERYPECGNLLLRPGGDGKDSVSVTTRqilnGSPVVKHYKVKRA--GSKYvIDVEDPFscPSLE 227
Cdd:cd10360   1 PWYFSGISRTQAqQLLLSPPNEPGAFLIRPSESSLGGYSLSVR----AQAKVCHYRICMApsGSLY-LQKGRLF--PGLE 73

                ....*.
gi 62511215 228 AVVNYF 233
Cdd:cd10360  74 ELLAYY 79
SH2_Src_Blk cd10371
Src homology 2 (SH2) domain found in B lymphoid kinase (Blk); Blk is a member of the Src ...
152-233 1.28e-04

Src homology 2 (SH2) domain found in B lymphoid kinase (Blk); Blk is a member of the Src non-receptor type tyrosine kinase family of proteins. Blk is expressed in the B-cells. Unlike most other Src members Blk lacks cysteine residues in the SH4 domain that undergo palmitylation. Blk is required for the development of IL-17-producing gamma-delta T cells. Furthermore, Blk is expressed in lymphoid precursors and, in this capacity, plays a role in regulating thymus cellularity during ontogeny. Blk has a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 198234 [Multi-domain]  Cd Length: 100  Bit Score: 40.77  E-value: 1.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 152 WCFLQVSRLEAQ-LLLERYPECGNLLLRPGGDGKDSVSVTTRQILNGSPVVKHYKVKRAGS-KYVIDVEDPFscPSLEAV 229
Cdd:cd10371   5 WFFRTISRKDAErQLLAPMNKAGSFLIRESESNKGAFSLSVKDVTTQGEVVKHYKIRSLDNgGYYISPRITF--PTLQAL 82

                ....
gi 62511215 230 VNYF 233
Cdd:cd10371  83 VQHY 86
SH2_Src_family cd09933
Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases; The Src ...
151-237 1.48e-03

Src homology 2 (SH2) domain found in the Src family of non-receptor tyrosine kinases; The Src family kinases are nonreceptor tyrosine kinases that have been implicated in pathways regulating proliferation, angiogenesis, invasion and metastasis, and bone metabolism. It is thought that transforming ability of Src is linked to its ability to activate key signaling molecules in these pathways, rather than through direct activity. As such blocking Src activation has been a target for drug companies. Src family members can be divided into 3 groups based on their expression pattern: 1) Src, Fyn, and Yes; 2) Blk, Fgr, Hck, Lck, and Lyn; and 3) Frk-related kinases Frk/Rak and Iyk/Bsk Of these, cellular c-Src is the best studied and most frequently implicated in oncogenesis. The c-Src contains five distinct regions: a unique N-terminal domain, an SH3 domain, an SH2 domain, a kinase domain and a regulatory tail, as do the other members of the family. Src exists in both active and inactive conformations. Negative regulation occurs through phosphorylation of Tyr, resulting in an intramolecular association between phosphorylated Tyr and the SH2 domain of SRC, which locks the protein in a closed conformation. Further stabilization of the inactive state occurs through interactions between the SH3 domain and a proline-rich stretch of residues within the kinase domain. Conversely, dephosphorylation of Tyr allows SRC to assume an open conformation. Full activity requires additional autophosphorylation of a Tyr residue within the catalytic domain. Loss of the negative-regulatory C-terminal segment has been shown to result in increased activity and transforming potential. Phosphorylation of the C-terminal Tyr residue by C-terminal Src kinase (Csk) and Csk homology kinase results in increased intramolecular interactions and consequent Src inactivation. Specific phosphatases, protein tyrosine phosphatase a (PTPa) and the SH-containing phosphatases SHP1/SHP2, have also been shown to take a part in Src activation. Src is also activated by direct binding of focal adhesion kinase (Fak) and Crk-associated substrate (Cas) to the SH2 domain. SRC activity can also be regulated by numerous receptor tyrosine kinases (RTKs), such as Her2, epidermal growth factor receptor (EGFR), fibroblast growth factor receptor, platelet-derived growth factor receptor (PDGFR), and vascular endothelial growth factor receptor (VEGFR). In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.


Pssm-ID: 199827  Cd Length: 101  Bit Score: 37.95  E-value: 1.48e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 62511215 151 PWCFLQVSRLEA--QLLLERYPeCGNLLLRPGGDGKDSVSVTTRQILNGS-PVVKHYKVKR--AGSKYVIDVEdpfSCPS 225
Cdd:cd09933   4 EWFFGKIKRKDAekLLLAPGNP-RGTFLIRESETTPGAYSLSVRDGDDARgDTVKHYRIRKldNGGYYITTRA---TFPT 79
                        90
                ....*....|..
gi 62511215 226 LEAVVNYFVTHT 237
Cdd:cd09933  80 LQELVQHYSKDA 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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