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Conserved domains on  [gi|7245649]
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Chain A, CELLOBIOHYDROLASE II

Protein Classification

glycoside hydrolase family 6 protein( domain architecture ID 10474417)

glycoside hydrolase family 6 protein similar to Humicola insolens endoglucanase-6B that cuts internal beta-1,4-glucosidic bonds, and to Podospora anserina exoglucanase CEL6B that cuts the non-reducing end beta-1,4-glucosidic linkages in cellulose and cellotetraose to release cellobiose

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_hydro_6 pfam01341
Glycosyl hydrolases family 6;
43-326 1.59e-160

Glycosyl hydrolases family 6;


:

Pssm-ID: 426212  Cd Length: 293  Bit Score: 451.30  E-value: 1.59e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649     43 EVPSFQWLDRNVTVDTLlVQTLSEIREANQAGanpQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREI 122
Cdd:pfam01341  13 DVPTFVWLDTIAAIPGL-EDALADARAAAKAG---GRTPVLVVYNLPDRDCAALASNGELSSADAGLARYKEYIDPIAAI 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    123 LISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFA 201
Cdd:pfam01341  89 IGDYSDLRAVVVIEPDSLANLVTNLSVPKCANAASAYEEGIAYALKQLNApPNVYVYLDAGHAGWLGWDANLGPAAELLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    202 KIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQ-FIVDQGRSGKQPTgQKEW 280
Cdd:pfam01341 169 KVYKAAGGPASVRGFATNVSNYNPTDEPTSPSYTQWNPNFDEKHYGEALSPLLVAAGFPAHiFIIDTSRNGNQGT-RPEW 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 7245649    281 GHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAAR 326
Cdd:pfam01341 248 GDWCNPPGAGFGVRPTTNTGDPLVDAFVWVKPPGESDGTSDSSAPR 293
 
Name Accession Description Interval E-value
Glyco_hydro_6 pfam01341
Glycosyl hydrolases family 6;
43-326 1.59e-160

Glycosyl hydrolases family 6;


Pssm-ID: 426212  Cd Length: 293  Bit Score: 451.30  E-value: 1.59e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649     43 EVPSFQWLDRNVTVDTLlVQTLSEIREANQAGanpQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREI 122
Cdd:pfam01341  13 DVPTFVWLDTIAAIPGL-EDALADARAAAKAG---GRTPVLVVYNLPDRDCAALASNGELSSADAGLARYKEYIDPIAAI 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    123 LISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFA 201
Cdd:pfam01341  89 IGDYSDLRAVVVIEPDSLANLVTNLSVPKCANAASAYEEGIAYALKQLNApPNVYVYLDAGHAGWLGWDANLGPAAELLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    202 KIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQ-FIVDQGRSGKQPTgQKEW 280
Cdd:pfam01341 169 KVYKAAGGPASVRGFATNVSNYNPTDEPTSPSYTQWNPNFDEKHYGEALSPLLVAAGFPAHiFIIDTSRNGNQGT-RPEW 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 7245649    281 GHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAAR 326
Cdd:pfam01341 248 GDWCNPPGAGFGVRPTTNTGDPLVDAFVWVKPPGESDGTSDSSAPR 293
 
Name Accession Description Interval E-value
Glyco_hydro_6 pfam01341
Glycosyl hydrolases family 6;
43-326 1.59e-160

Glycosyl hydrolases family 6;


Pssm-ID: 426212  Cd Length: 293  Bit Score: 451.30  E-value: 1.59e-160
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649     43 EVPSFQWLDRNVTVDTLlVQTLSEIREANQAGanpQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREI 122
Cdd:pfam01341  13 DVPTFVWLDTIAAIPGL-EDALADARAAAKAG---GRTPVLVVYNLPDRDCAALASNGELSSADAGLARYKEYIDPIAAI 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    123 LISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDL-PHVAMYMDAGHAGWLGWPANIQPAAELFA 201
Cdd:pfam01341  89 IGDYSDLRAVVVIEPDSLANLVTNLSVPKCANAASAYEEGIAYALKQLNApPNVYVYLDAGHAGWLGWDANLGPAAELLA 168

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7245649    202 KIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQ-FIVDQGRSGKQPTgQKEW 280
Cdd:pfam01341 169 KVYKAAGGPASVRGFATNVSNYNPTDEPTSPSYTQWNPNFDEKHYGEALSPLLVAAGFPAHiFIIDTSRNGNQGT-RPEW 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 7245649    281 GHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAAR 326
Cdd:pfam01341 248 GDWCNPPGAGFGVRPTTNTGDPLVDAFVWVKPPGESDGTSDSSAPR 293
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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