NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|73920029|sp|O89113|]
View 

RecName: Full=Immediate early response gene 5 protein

Protein Classification

IER domain-containing protein( domain architecture ID 12065715)

IER domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
IER pfam05760
Immediate early response protein (IER); This family consists of several eukaryotic immediate ...
 1-308 7.21e-77

Immediate early response protein (IER); This family consists of several eukaryotic immediate early response (IER) 2 and 5 proteins. The role of IER5 is unclear although it play an important role in mediating the cellular response to mitogenic signals. Again, little is known about the function of IER2 although it is thought to play a role in mediating the cellular responses to a variety of extracellular signals.


:

Pssm-ID: 461732  Cd Length: 310  Bit Score: 237.10  E-value: 7.21e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029     1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGPAGTPAVPPPQQPGEPVAgpp 80
Cdd:pfam05760   1 MECAVDAQSLISISLRKIHNSRTQRGGIKLHKNLLVSYVLRNARQVYLSEKYAELYRMQQYEEVAPPPEQQEYMAVC--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    81 sGWGEPPPPVARAawpepepqpqpqpqrpsvchtPGAGSSEPVAAVAGSGEALRGGEEdsaaaawgrVERPRAAssgggs 160
Cdd:pfam05760  78 -GEIPELNPLPLA---------------------EDVGDEGPADDVYCNGTGLESGEW---------HCGPRQA------ 120

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   161 dACPEGPRAVRRPCGCPPAV------------EERSSEDGSPAPPAPCPRKRGA-----------------AGVGGGRAS 211
Cdd:pfam05760 121 -AGPEEPAHARAPSAAPPSPadsalmleeackSPDPSSEEYPAPPAVPRKRGAAqcnkttvldldthvvttVENGYLHQD 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   212 CSAPGSTPL------KKPRRNSEE-----QPVT---------------GEDDTDEEMETGNVANLISIFGSSFSGLLRKS 265
Cdd:pfam05760 200 CCAQPKQPCqgaqapAKKKRKVDFgyyivDPEEvlpdfapckrarfedCSDSDPEELDTSNISNLISIFGSGFSGLVSRQ 279

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 73920029   266 PaggreeeeaeegGPEAAEPGQICCDKPVLRDMSPWSTAIVAF 308
Cdd:pfam05760 280 P------------DLEQIFNGQICCSKQVLASLGAWTRAIVAF 310
 
Name Accession Description Interval E-value
IER pfam05760
Immediate early response protein (IER); This family consists of several eukaryotic immediate ...
 1-308 7.21e-77

Immediate early response protein (IER); This family consists of several eukaryotic immediate early response (IER) 2 and 5 proteins. The role of IER5 is unclear although it play an important role in mediating the cellular response to mitogenic signals. Again, little is known about the function of IER2 although it is thought to play a role in mediating the cellular responses to a variety of extracellular signals.


Pssm-ID: 461732  Cd Length: 310  Bit Score: 237.10  E-value: 7.21e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029     1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGPAGTPAVPPPQQPGEPVAgpp 80
Cdd:pfam05760   1 MECAVDAQSLISISLRKIHNSRTQRGGIKLHKNLLVSYVLRNARQVYLSEKYAELYRMQQYEEVAPPPEQQEYMAVC--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    81 sGWGEPPPPVARAawpepepqpqpqpqrpsvchtPGAGSSEPVAAVAGSGEALRGGEEdsaaaawgrVERPRAAssgggs 160
Cdd:pfam05760  78 -GEIPELNPLPLA---------------------EDVGDEGPADDVYCNGTGLESGEW---------HCGPRQA------ 120

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   161 dACPEGPRAVRRPCGCPPAV------------EERSSEDGSPAPPAPCPRKRGA-----------------AGVGGGRAS 211
Cdd:pfam05760 121 -AGPEEPAHARAPSAAPPSPadsalmleeackSPDPSSEEYPAPPAVPRKRGAAqcnkttvldldthvvttVENGYLHQD 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   212 CSAPGSTPL------KKPRRNSEE-----QPVT---------------GEDDTDEEMETGNVANLISIFGSSFSGLLRKS 265
Cdd:pfam05760 200 CCAQPKQPCqgaqapAKKKRKVDFgyyivDPEEvlpdfapckrarfedCSDSDPEELDTSNISNLISIFGSGFSGLVSRQ 279

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 73920029   266 PaggreeeeaeegGPEAAEPGQICCDKPVLRDMSPWSTAIVAF 308
Cdd:pfam05760 280 P------------DLEQIFNGQICCSKQVLASLGAWTRAIVAF 310
PHA03247 PHA03247
large tegument protein UL36; Provisional
 50-198 2.26e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 2.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    50 DPCPGLYLAGPAGTP--AVPPPQ---QPGEPVAGP----PSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPG---- 116
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPdrSVPPPRpapRPSEPAVTSrarrPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDpppp 2629

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   117 AGSSEPVAAVAGSGEALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSPAPPAPC 196
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPE 2709


                  ..
gi 73920029   197 PR 198
Cdd:PHA03247 2710 PA 2711
 
Name Accession Description Interval E-value
IER pfam05760
Immediate early response protein (IER); This family consists of several eukaryotic immediate ...
 1-308 7.21e-77

Immediate early response protein (IER); This family consists of several eukaryotic immediate early response (IER) 2 and 5 proteins. The role of IER5 is unclear although it play an important role in mediating the cellular response to mitogenic signals. Again, little is known about the function of IER2 although it is thought to play a role in mediating the cellular responses to a variety of extracellular signals.


Pssm-ID: 461732  Cd Length: 310  Bit Score: 237.10  E-value: 7.21e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029     1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGPAGTPAVPPPQQPGEPVAgpp 80
Cdd:pfam05760   1 MECAVDAQSLISISLRKIHNSRTQRGGIKLHKNLLVSYVLRNARQVYLSEKYAELYRMQQYEEVAPPPEQQEYMAVC--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    81 sGWGEPPPPVARAawpepepqpqpqpqrpsvchtPGAGSSEPVAAVAGSGEALRGGEEdsaaaawgrVERPRAAssgggs 160
Cdd:pfam05760  78 -GEIPELNPLPLA---------------------EDVGDEGPADDVYCNGTGLESGEW---------HCGPRQA------ 120

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   161 dACPEGPRAVRRPCGCPPAV------------EERSSEDGSPAPPAPCPRKRGA-----------------AGVGGGRAS 211
Cdd:pfam05760 121 -AGPEEPAHARAPSAAPPSPadsalmleeackSPDPSSEEYPAPPAVPRKRGAAqcnkttvldldthvvttVENGYLHQD 199

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   212 CSAPGSTPL------KKPRRNSEE-----QPVT---------------GEDDTDEEMETGNVANLISIFGSSFSGLLRKS 265
Cdd:pfam05760 200 CCAQPKQPCqgaqapAKKKRKVDFgyyivDPEEvlpdfapckrarfedCSDSDPEELDTSNISNLISIFGSGFSGLVSRQ 279

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 73920029   266 PaggreeeeaeegGPEAAEPGQICCDKPVLRDMSPWSTAIVAF 308
Cdd:pfam05760 280 P------------DLEQIFNGQICCSKQVLASLGAWTRAIVAF 310
PHA03247 PHA03247
large tegument protein UL36; Provisional
 50-198 2.26e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 2.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    50 DPCPGLYLAGPAGTP--AVPPPQ---QPGEPVAGP----PSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPG---- 116
Cdd:PHA03247 2550 DPPPPLPPAAPPAAPdrSVPPPRpapRPSEPAVTSrarrPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDpppp 2629

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   117 AGSSEPVAAVAGSGEALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSPAPPAPC 196
Cdd:PHA03247 2630 SPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPE 2709


                  ..
gi 73920029   197 PR 198
Cdd:PHA03247 2710 PA 2711
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
58-232 1.11e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 43.71  E-value: 1.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   58 AGPAgtPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGGE 137
Cdd:PRK12323 372 AGPA--TAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPA 449

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029  138 EDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSS--EDGSPAPPAPCPRKRGAAGVGGGRASCSAP 215
Cdd:PRK12323 450 PAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPpwEELPPEFASPAPAQPDAAPAGWVAESIPDP 529

                        170
                 ....*....|....*..
gi 73920029  216 GSTPLKKPRRNSEEQPV 232
Cdd:PRK12323 530 ATADPDDAFETLAPAPA 546
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 58-240 4.06e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 4.06e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   58 AGPAGTPAVPPPQQPGEPVA-GPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGG 136
Cdd:PRK07764 595 AGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAG 674

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029  137 EEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEE------------RSSEDGSPAPPAP--CPRKRGA 202
Cdd:PRK07764 675 GAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQppqaaqgasapsPAADDPVPLPPEPddPPDPAGA 754

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 73920029  203 AGVGGGRASCSAPGSTPLKKPRRNSEEQPVTGEDDTDE 240
Cdd:PRK07764 755 PAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPS 792
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 53-198 4.67e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 4.67e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   53 PGLYLAGPAGTPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSvcHTPGAGSSEPVAAVAGSGEA 132
Cdd:PRK07764 636 PAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAP--AGAAPAQPAPAPAATPPAGQ 713

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 73920029  133 LRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSPAPPAPCPR 198
Cdd:PRK07764 714 ADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 58-188 1.10e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.47  E-value: 1.10e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   58 AGPAGTPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSE---PVAAVAGSGEALR 134
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAaaaPAAAPAAAPAAVA 446

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 73920029  135 GGEEDSAAAAWGRVERPRAASSGggsdacPEGPRAVRRPCGCPPAVEERSSEDG 188
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPE------PAVASAAPAPAAAPAAARLTPTEEG 494
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
58-195 1.25e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 40.60  E-value: 1.25e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   58 AGPAGTPAVPPPQQPGEPVAGPPsgwgePPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGGE 137
Cdd:PRK07003 400 TAVTGAAGAALAPKAAAAAAATR-----AEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADS 474

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 73920029  138 EDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPcgCPPAVEERSSEDGSPAPPAP 195
Cdd:PRK07003 475 GSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDA--RAPAAASREDAPAAAAPPAP 530
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 58-169 4.17e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 38.81  E-value: 4.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   58 AGPAGTPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGGE 137
Cdd:PRK07764 391 AGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAP 470

                         90       100       110
                 ....*....|....*....|....*....|..
gi 73920029  138 EDSAAAAWGRVERPRAASSGGGSDACPEGPRA 169
Cdd:PRK07764 471 AAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
41-217 5.08e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 38.68  E-value: 5.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   41 RSARQVYLSDPCPGLYLAGPAGTPAVPPPQQPGE---PVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGA 117
Cdd:PRK07003 375 RVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAalaPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKAN 454

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029  118 GSSEPVAAVAGSGEALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCgcPPAVEERSSEdgsPAPPAPCP 197
Cdd:PRK07003 455 ARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDAR--APAAASREDA---PAAAAPPA 529

                        170       180
                 ....*....|....*....|
gi 73920029  198 RKRGAAGVGGGRASCSAPGS 217
Cdd:PRK07003 530 PEARPPTPAAAAPAARAGGA 549
PHA03247 PHA03247
large tegument protein UL36; Provisional
 59-197 5.26e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 38.77  E-value: 5.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    59 GPAGTPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAA-VAGSGEALRGGE 137
Cdd:PHA03247 2693 GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARpPTTAGPPAPAPP 2772

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   138 EDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEdGSPAPPAPCP 197
Cdd:PHA03247 2773 AAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPA-ASPAGPLPPP 2831
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 60-162 8.63e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 37.66  E-value: 8.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   60 PAGTPAVPPPQQPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGGEED 139
Cdd:PRK07764 411 APAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAP 490

                         90       100
                 ....*....|....*....|...
gi 73920029  140 SAAAAwgrveRPRAASSGGGSDA 162
Cdd:PRK07764 491 AAAPA-----APAAPAAPAGADD 508
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
36-219 9.73e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 37.55  E-value: 9.73e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   36 VSLVLRSARQVYLSDPCPGLYLAGPAGTPAVPPPQQPGEPVAGPPS-----------------GWGEPPPPVARAAWPEP 98
Cdd:PRK12323 382 VAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSpapealaaarqasargpGGAPAPAPAPAAAPAAA 461

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   99 EPQPQPQPQRPSVCHTPGAGSSEPVAAVAGSGEALRGGEEDSAAAAWGRVERPRAASSGGGSDACPegpravrRPCGCPP 178
Cdd:PRK12323 462 ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIP-------DPATADP 534

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 73920029  179 AVEERSSEDGSPAPPAPCPRKRGAAGVGGGRASCSAPGSTP 219
Cdd:PRK12323 535 DDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD 575
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 48-236 9.92e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 37.84  E-value: 9.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029    48 LSDPCPGLYLAGPAGTPAVPPPQqPGEPVAGPPSGWGEPPPPVARAAWPEPEPQPQPQPQRPSVCHTPGAGSSEPVAAVA 127
Cdd:PHA03307   92 LSTLAPASPAREGSPTPPGPSSP-DPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSR 170

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 73920029   128 GSGEALRGGEEDSAAAAWGRVERPRAASSGGGSDACPEGPRAVRRPCGCPPAVEERSSEDGSPAPPAPCPRKRGAAGVGG 207
Cdd:PHA03307  171 QAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWG 250

                         170       180
                  ....*....|....*....|....*....
gi 73920029   208 GRASCSAPGSTPLKKPRRNSEEQPVTGED 236
Cdd:PHA03307  251 PENECPLPRPAPITLPTRIWEASGWNGPS 279
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH