|
Name |
Accession |
Description |
Interval |
E-value |
| POM121 |
pfam15229 |
POM121 family; |
292-527 |
2.58e-91 |
|
POM121 family;
Pssm-ID: 464572 [Multi-domain] Cd Length: 226 Bit Score: 292.72 E-value: 2.58e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 292 KEKKKRTVAEED-QLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSS 370
Cdd:pfam15229 1 KESRKRTVKDEDgQSVTEGQDSKRRRPDSSGSAQSAFRPLLANGVPSSFVPKPGPLKRGLHSKSSEDSLIKRSQTSSLSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 371 LasactggipsSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCQqSSSSPPLVTDKES 450
Cdd:pfam15229 81 C----------SKRNAITSSYSSTRGFPQLQKRSGPGASPLSSPASSRSQTPQRPAKKARSEEGHS-SSSSASVKSDKEK 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74181810 451 PGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLE 527
Cdd:pfam15229 150 QPEKVADTPSGKKQNSRNSPPTSGSSRPRKRKIPLLPSRRGEPLTLPPPPQLGYRVTAEDLDLEKKAALQWINKVLE 226
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
422-707 |
1.18e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 422 PERPAKKTREEEPcqqssSSPPLVTDKESPGEKVTDTTTGKQQSSW---TSPPTPGSSGQRKRKIQLlpsRRGDQLTLPP 498
Cdd:PHA03247 2577 PSEPAVTSRARRP-----DAPPQSARPRAPVDDRGDPRGPAPPSPLppdTHAPDPPPPSPSPAANEP---DPHPPPTVPP 2648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 499 PPELGYSITAEDLDMERKASLQ------------WFNKVLEDK--PDDASASATDGPPSTSPPFTFTLPAV----GPAAS 560
Cdd:PHA03247 2649 PERPRDDPAPGRVSRPRRARRLgraaqassppqrPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATplppGPAAA 2728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 561 PASLPAPSSNPLLESLKKMQESPA--------PSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATF 632
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 74181810 633 LGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPA 707
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV 2883
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
918-1164 |
3.99e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 47.83 E-value: 3.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 918 SSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLkAAASTFGAPA 997
Cdd:COG3469 2 SSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-ATSSTTSTTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 998 STQPAFGSTTSVFSFGSATTSGFGAaataatttqttnsgsssslfgssAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSG 1077
Cdd:COG3469 81 TATAAAAAATSTSATLVATSTASGA-----------------------NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1078 TFSFGSGQSGTPGTTTSfgslsQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASST 1157
Cdd:COG3469 138 ASATSSAGSTTTTTTVS-----GTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGL 212
|
....*..
gi 74181810 1158 PAQGFVG 1164
Cdd:COG3469 213 PKHVLVG 219
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
974-1180 |
3.24e-03 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 41.58 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 974 TFGSAaqPAFGGLKAAASTFGAPASTQPafgSTTSVFSFGSattsgFGAAATAATTTQTTNSGSSSSLFGSSAPSPFTFG 1053
Cdd:pfam15967 5 SFGGG--PGSTATAGGGFSFGAAAASNP---GSTGGFSFGT-----LGAAPAATATTTTATLGLGGGLFGQKPATGFTFG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1054 G---SAAPAGSGGFGLSATPGTSSTSGTFSFGSGQ------------SGTPGTTTSFGSLSQNTlGAPSQGSPFAFSVGS 1118
Cdd:pfam15967 75 TpasSTAATGPTGLTLGTPAATTAASTGFSLGFNKpaasatpfslpaSSTSGGGLSLGSVLTST-AAQQGATGFTLNLGG 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 74181810 1119 TP-----ESKPVFGGTSTPTFG----QSAPAPGVGTTGSSLSFGASSTPAqgfvgvgpfgSAAPSFSIGAG 1180
Cdd:pfam15967 154 TPatttaVSTGLSLGSTLTSLGgslfQNTNSTGLGQTTLGLTLLATSTAP----------VSAPAASEGLG 214
|
|
| PTZ00473 |
PTZ00473 |
Plasmodium Vir superfamily; Provisional |
1069-1170 |
4.49e-03 |
|
Plasmodium Vir superfamily; Provisional
Pssm-ID: 240430 [Multi-domain] Cd Length: 420 Bit Score: 40.99 E-value: 4.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1069 TPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSpFAFSVGSTPESKPVFGGTStptfGQSAPAPGVGTTGS 1148
Cdd:PTZ00473 316 GPYNANYGGQFNSRSGRTGSSESIRGFTYDSSTTYGGSSYGT-SQTDSTSTYGSRSTFDSST----GGGSQSGGGSTYGG 390
|
90 100
....*....|....*....|..
gi 74181810 1149 SLSFGASSTPAQGFVGVGPFGS 1170
Cdd:PTZ00473 391 SSTFDGSSRGSSDSFGVSYFGP 412
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
328-639 |
4.66e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.31 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 328 EPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSSLASACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPT 407
Cdd:PHA03307 127 PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 408 SSPFSSPASSRSQTPERPAKKTREEEPCQQSSSSPPLVTDKESPGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLP 487
Cdd:PHA03307 207 PRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 488 SRRGDQLTLPPPPELGYSitAEDLDMERKASLQWfnkvlEDKPDDASASATDGPPSTSPpftftlPAVGPAASPASLPAP 567
Cdd:PHA03307 287 SSSSPRERSPSPSPSSPG--SGPAPSSPRASSSS-----SSSRESSSSSTSSSSESSRG------AAVSPGPSPSRSPSP 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 74181810 568 SSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS 639
Cdd:PHA03307 354 SRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGA 425
|
|
| SAP130_C |
pfam16014 |
Histone deacetylase complex subunit SAP130 C-terminus; |
537-631 |
4.95e-03 |
|
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain] Cd Length: 371 Bit Score: 40.69 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 537 ATDGPPSTSPPFTFTLPAVGPAASP-----ASLPAPSSNPLLESLKKMQES---PAPSSSEPAEAATVAAPSPPKTPSLL 608
Cdd:pfam16014 69 APAAPPSQPSVVLSTLPAAMAVTPPipasmANVVAPPTQPAASSTAACAVSsvlPEIKIKQEAEPMDTSQSVPPLTPTSI 148
|
90 100
....*....|....*....|...
gi 74181810 609 APLVSPLAGPLASTSSDSKPAAT 631
Cdd:pfam16014 149 SPALTSLANNLSVPAGDLLPGAS 171
|
|
| KREPA2 |
cd23959 |
Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of ... |
528-698 |
7.99e-03 |
|
Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of the parasitic protozoan's KREPA RNA editing catalytic complex (RECC). Kinetoplastid RNA editing (KRE) proteins occur as pairs or sets of related proteins in multiple complexes. KREPA complex is composed of six components (KREPA1-6), which share a conserved C-terminal region containing an oligonucleotide-binding (OB)-fold-like domain. KREPAs are responsible for the site-specific insertion and deletion of U nucleotides in the kinetoplastid mitochondria pre-messenger RNA. Apart from the conserved C-terminal OB-fold domain, KREPA1, KREPA2, and KREPA3 contain two conserved C2H2 zinc-finger domains. KREPA2 and kinetoplastid RNA editing ligase 1 (KREL1) are specific for ligation post-U-deletion and are paralogous to KREL2 and KREPA1 that are specific for ligation post-U-insertion. KREPA2, is critical for RECC stability and KREL1 integration into the complex.
Pssm-ID: 467780 [Multi-domain] Cd Length: 424 Bit Score: 40.24 E-value: 7.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 528 DKPDDASASATDGPPSTSPPFT-FTLPAVGPAASPASL----PAPSSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPP 602
Cdd:cd23959 70 DGPGLVTASTVSDCYVGNANFYeVDMSDAFAMAPDESLgpfrAARVPNPFSASSSTQRETHKTAQVAPPKAEPQTAPVTP 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 603 ----KTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS-SITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLF 677
Cdd:cd23959 150 fgqlPMFGQHPPPAKPLPAAAAAQQSSASPGEVASPFASGTvSASPFATATDTAPSSGAPDGFPAEASAPSPFAAPASAA 229
|
170 180
....*....|....*....|.
gi 74181810 678 GMLSPPASSSSLATPAPACAS 698
Cdd:cd23959 230 SFPAAPVANGEAATPTHACTI 250
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| POM121 |
pfam15229 |
POM121 family; |
292-527 |
2.58e-91 |
|
POM121 family;
Pssm-ID: 464572 [Multi-domain] Cd Length: 226 Bit Score: 292.72 E-value: 2.58e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 292 KEKKKRTVAEED-QLHLDGQENKRRRHDSGGSGHSAFEPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSS 370
Cdd:pfam15229 1 KESRKRTVKDEDgQSVTEGQDSKRRRPDSSGSAQSAFRPLLANGVPSSFVPKPGPLKRGLHSKSSEDSLIKRSQTSSLSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 371 LasactggipsSSRNAITSSYSSTRGISQLWKRSGPTSSPFSSPASSRSQTPERPAKKTREEEPCQqSSSSPPLVTDKES 450
Cdd:pfam15229 81 C----------SKRNAITSSYSSTRGFPQLQKRSGPGASPLSSPASSRSQTPQRPAKKARSEEGHS-SSSSASVKSDKEK 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74181810 451 PGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLPSRRGDQLTLPPPPELGYSITAEDLDMERKASLQWFNKVLE 527
Cdd:pfam15229 150 QPEKVADTPSGKKQNSRNSPPTSGSSRPRKRKIPLLPSRRGEPLTLPPPPQLGYRVTAEDLDLEKKAALQWINKVLE 226
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
422-707 |
1.18e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 422 PERPAKKTREEEPcqqssSSPPLVTDKESPGEKVTDTTTGKQQSSW---TSPPTPGSSGQRKRKIQLlpsRRGDQLTLPP 498
Cdd:PHA03247 2577 PSEPAVTSRARRP-----DAPPQSARPRAPVDDRGDPRGPAPPSPLppdTHAPDPPPPSPSPAANEP---DPHPPPTVPP 2648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 499 PPELGYSITAEDLDMERKASLQ------------WFNKVLEDK--PDDASASATDGPPSTSPPFTFTLPAV----GPAAS 560
Cdd:PHA03247 2649 PERPRDDPAPGRVSRPRRARRLgraaqassppqrPRRRAARPTvgSLTSLADPPPPPPTPEPAPHALVSATplppGPAAA 2728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 561 PASLPAPSSNPLLESLKKMQESPA--------PSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATF 632
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGgparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPP 2808
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 74181810 633 LGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPA 707
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPV 2883
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
529-671 |
2.70e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 48.56 E-value: 2.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 529 KPDDASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPssnplleslkkmQESPAPSSSEPAEAATVAAPSPPKTPSLL 608
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAP------------AAAPAAAASAPAAPPAAAPPAPVAAPAAA 432
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 74181810 609 APLVSPLAGPLASTSSDSKPAATflgLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTP 671
Cdd:PRK14951 433 APAAAPAAAPAAVALAPAPPAQA---APETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTE 492
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
526-672 |
2.88e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 48.23 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 526 LEDKPDDASASaTDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESlkkmqeSPAPSSSEPAEAATVAAPSPPKTP 605
Cdd:PRK14971 362 LTQKGDDASGG-RGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQ------PSAPQSATQPAGTPPTVSVDPPAA 434
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 74181810 606 SLLAPLVSPLAGPLASTSSDSKPAATFLglasASSITPLTdskSSGVSQAEQSVSTPASTASSPTPK 672
Cdd:PRK14971 435 VPVNPPSTAPQAVRPAQFKEEKKIPVSK----VSSLGPST---LRPIQEKAEQATGNIKEAPTGTQK 494
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
918-1164 |
3.99e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 47.83 E-value: 3.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 918 SSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLkAAASTFGAPA 997
Cdd:COG3469 2 SSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTA-ATSSTTSTTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 998 STQPAFGSTTSVFSFGSATTSGFGAaataatttqttnsgsssslfgssAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSG 1077
Cdd:COG3469 81 TATAAAAAATSTSATLVATSTASGA-----------------------NTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSG 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1078 TFSFGSGQSGTPGTTTSfgslsQNTLGAPSQGSPFAFSVGSTPESKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASST 1157
Cdd:COG3469 138 ASATSSAGSTTTTTTVS-----GTETATGGTTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGL 212
|
....*..
gi 74181810 1158 PAQGFVG 1164
Cdd:COG3469 213 PKHVLVG 219
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
782-1170 |
7.44e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 47.08 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 782 TGLGTATSTVASGTAASASKPVFGFGVTTAASTASSTMTSTSQSVLFGGAPPVTTSSSAPALASIFQFGKPLAPAASAAG 861
Cdd:COG4625 165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 862 TSFSQPLASSTQTAASNSGFSGFGSTLTTSTSAPATTSQPTLTFSNTVTPTFNIPFSSSAKPALPTYPGANSQPTFGATD 941
Cdd:COG4625 245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 942 GATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAFGGLKAAASTFGAPASTQPAFGSTTSVFSFGSATTSGFG 1021
Cdd:COG4625 325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1022 AAATAATTTQTTNSGSSSSLFGSSAPSPFTFGGSAAPAGSGGFGLSATPGTSSTSGTFSFGSGQSGTP-GTTTSFGSLSQ 1100
Cdd:COG4625 405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGaGTLTLTGNNTY 484
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 74181810 1101 NTLGAPSQGSPFAFSVGSTPE--------SKPVFGGTSTPTFGQSAPAPGVGTTGSSLSFGASSTPAQGFVGVGPFGS 1170
Cdd:COG4625 485 TGTTTVNGGGNYTQSAGSTLAvevdaansDRLVVTGTATLNGGTVVVLAGGYAPGTTYTILAVAAALDALAGNGDLSA 562
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
529-631 |
1.23e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 529 KPDDASASATDGPPSTSPPftfTLPAVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLL 608
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAA---SAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113
|
90 100
....*....|....*....|....*...
gi 74181810 609 APLVSPLAGPLAST-----SSDSKPAAT 631
Cdd:PRK12270 114 EDEVTPLRGAAAAVaknmdASLEVPTAT 141
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
530-630 |
1.26e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 530 PDDASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESLKKM--QESPAPSSSEPAEAATVAAPSPPKTPSL 607
Cdd:PRK07994 376 APAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAArqQLQRAQGATKAKKSEPAAASRARPVNSA 455
|
90 100
....*....|....*....|...
gi 74181810 608 LAPLVSPLAGPLASTSSDSKPAA 630
Cdd:PRK07994 456 LERLASVRPAPSALEKAPAKKEA 478
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
974-1180 |
3.24e-03 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 41.58 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 974 TFGSAaqPAFGGLKAAASTFGAPASTQPafgSTTSVFSFGSattsgFGAAATAATTTQTTNSGSSSSLFGSSAPSPFTFG 1053
Cdd:pfam15967 5 SFGGG--PGSTATAGGGFSFGAAAASNP---GSTGGFSFGT-----LGAAPAATATTTTATLGLGGGLFGQKPATGFTFG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1054 G---SAAPAGSGGFGLSATPGTSSTSGTFSFGSGQ------------SGTPGTTTSFGSLSQNTlGAPSQGSPFAFSVGS 1118
Cdd:pfam15967 75 TpasSTAATGPTGLTLGTPAATTAASTGFSLGFNKpaasatpfslpaSSTSGGGLSLGSVLTST-AAQQGATGFTLNLGG 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 74181810 1119 TP-----ESKPVFGGTSTPTFG----QSAPAPGVGTTGSSLSFGASSTPAqgfvgvgpfgSAAPSFSIGAG 1180
Cdd:pfam15967 154 TPatttaVSTGLSLGSTLTSLGgslfQNTNSTGLGQTTLGLTLLATSTAP----------VSAPAASEGLG 214
|
|
| PTZ00473 |
PTZ00473 |
Plasmodium Vir superfamily; Provisional |
1069-1170 |
4.49e-03 |
|
Plasmodium Vir superfamily; Provisional
Pssm-ID: 240430 [Multi-domain] Cd Length: 420 Bit Score: 40.99 E-value: 4.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 1069 TPGTSSTSGTFSFGSGQSGTPGTTTSFGSLSQNTLGAPSQGSpFAFSVGSTPESKPVFGGTStptfGQSAPAPGVGTTGS 1148
Cdd:PTZ00473 316 GPYNANYGGQFNSRSGRTGSSESIRGFTYDSSTTYGGSSYGT-SQTDSTSTYGSRSTFDSST----GGGSQSGGGSTYGG 390
|
90 100
....*....|....*....|..
gi 74181810 1149 SLSFGASSTPAQGFVGVGPFGS 1170
Cdd:PTZ00473 391 SSTFDGSSRGSSDSFGVSYFGP 412
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
328-639 |
4.66e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.31 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 328 EPLVANGVPAAFVPKPGSLKRSLASQSSDDHLNKRSRTSSVSSLASACTGGIPSSSRNAITSSYSSTRGISQLWKRSGPT 407
Cdd:PHA03307 127 PPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 408 SSPFSSPASSRSQTPERPAKKTREEEPCQQSSSSPPLVTDKESPGEKVTDTTTGKQQSSWTSPPTPGSSGQRKRKIQLLP 487
Cdd:PHA03307 207 PRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPAS 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 488 SRRGDQLTLPPPPELGYSitAEDLDMERKASLQWfnkvlEDKPDDASASATDGPPSTSPpftftlPAVGPAASPASLPAP 567
Cdd:PHA03307 287 SSSSPRERSPSPSPSSPG--SGPAPSSPRASSSS-----SSSRESSSSSTSSSSESSRG------AAVSPGPSPSRSPSP 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 74181810 568 SSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPPKTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS 639
Cdd:PHA03307 354 SRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGA 425
|
|
| SAP130_C |
pfam16014 |
Histone deacetylase complex subunit SAP130 C-terminus; |
537-631 |
4.95e-03 |
|
Histone deacetylase complex subunit SAP130 C-terminus;
Pssm-ID: 464973 [Multi-domain] Cd Length: 371 Bit Score: 40.69 E-value: 4.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 537 ATDGPPSTSPPFTFTLPAVGPAASP-----ASLPAPSSNPLLESLKKMQES---PAPSSSEPAEAATVAAPSPPKTPSLL 608
Cdd:pfam16014 69 APAAPPSQPSVVLSTLPAAMAVTPPipasmANVVAPPTQPAASSTAACAVSsvlPEIKIKQEAEPMDTSQSVPPLTPTSI 148
|
90 100
....*....|....*....|...
gi 74181810 609 APLVSPLAGPLASTSSDSKPAAT 631
Cdd:pfam16014 149 SPALTSLANNLSVPAGDLLPGAS 171
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
829-1025 |
6.33e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 40.51 E-value: 6.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 829 GGAPPVTTSSSAPALASIFQFGKPLAPAASAAGTSFSQPLASSTQTAASNSGFSGFGSTltTSTSAPATTSQPTLTFSNT 908
Cdd:COG3469 3 SVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGT--GTTAASSTAATSSTTSTTA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 909 VTPTFNIPFSSSAKPALPTYPGANSQPTFGATDGATKPALAPSFGSSFTFGNSVASAPSAAPAPATFGSAAQPAfGGLKA 988
Cdd:COG3469 81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVS-GTETA 159
|
170 180 190
....*....|....*....|....*....|....*..
gi 74181810 989 AASTFGAPASTQPAFGSTTSVFSFGSATTSGFGAAAT 1025
Cdd:COG3469 160 TGGTTTTSTTTTTTSASTTPSATTTATATTASGATTP 196
|
|
| KREPA2 |
cd23959 |
Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of ... |
528-698 |
7.99e-03 |
|
Kinetoplastid RNA Editing Protein A2 (KREPA2); The KREPA2 (TbMP63) protein is a component of the parasitic protozoan's KREPA RNA editing catalytic complex (RECC). Kinetoplastid RNA editing (KRE) proteins occur as pairs or sets of related proteins in multiple complexes. KREPA complex is composed of six components (KREPA1-6), which share a conserved C-terminal region containing an oligonucleotide-binding (OB)-fold-like domain. KREPAs are responsible for the site-specific insertion and deletion of U nucleotides in the kinetoplastid mitochondria pre-messenger RNA. Apart from the conserved C-terminal OB-fold domain, KREPA1, KREPA2, and KREPA3 contain two conserved C2H2 zinc-finger domains. KREPA2 and kinetoplastid RNA editing ligase 1 (KREL1) are specific for ligation post-U-deletion and are paralogous to KREL2 and KREPA1 that are specific for ligation post-U-insertion. KREPA2, is critical for RECC stability and KREL1 integration into the complex.
Pssm-ID: 467780 [Multi-domain] Cd Length: 424 Bit Score: 40.24 E-value: 7.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 528 DKPDDASASATDGPPSTSPPFT-FTLPAVGPAASPASL----PAPSSNPLLESLKKMQESPAPSSSEPAEAATVAAPSPP 602
Cdd:cd23959 70 DGPGLVTASTVSDCYVGNANFYeVDMSDAFAMAPDESLgpfrAARVPNPFSASSSTQRETHKTAQVAPPKAEPQTAPVTP 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 603 ----KTPSLLAPLVSPLAGPLASTSSDSKPAATFLGLASAS-SITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSMLF 677
Cdd:cd23959 150 fgqlPMFGQHPPPAKPLPAAAAAQQSSASPGEVASPFASGTvSASPFATATDTAPSSGAPDGFPAEASAPSPFAAPASAA 229
|
170 180
....*....|....*....|.
gi 74181810 678 GMLSPPASSSSLATPAPACAS 698
Cdd:cd23959 230 SFPAAPVANGEAATPTHACTI 250
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
533-759 |
8.93e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.22 E-value: 8.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 533 ASASATDGPPSTSPPFTFTLPAVGPAASPASLPAPSSNPLLESLKKMQESPAPSSSePAEAATVAAPSPPKTPSLLAPlv 612
Cdd:PRK07003 418 AAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPAD-SGSASAPASDAPPDAAFEPAP-- 494
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74181810 613 sPLAGPLASTSSDSKPAATfLGLASASSITPLTDSKSSGVSQAEQSVSTPASTASSPTPKPSML--FGMLSPPASSSSLA 690
Cdd:PRK07003 495 -RAAAPSAATPAAVPDARA-PAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLrnAGMRVSSDRGARAA 572
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 74181810 691 TPAPACASPMFKPIFPATPKSESDSPLPSSSSAATTASSSTAPPTAASTTPTFKPIFDKMEPFTAMPLS 759
Cdd:PRK07003 573 AAAKPAAAPAAAPKPAAPRVAVQVPTPRARAATGDAPPNGAARAEQAAESRGAPPPWEDIPPDDYVPLS 641
|
|
|