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Conserved domains on  [gi|758995664|ref|XP_961667|]
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chromate ion transporter [Neurospora crassa OR74A]

Protein Classification

chromate transporter( domain architecture ID 10493415)

chromate transporter reduces chromate accumulation and is essential for chromate resistance

Gene Ontology:  GO:0015109|GO:0015703
PubMed:  9791139
TCDB:  2.A.51

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
373-551 6.07e-38

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


:

Pssm-ID: 426763  Cd Length: 163  Bit Score: 137.22  E-value: 6.07e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  373 LFVNMYLAGTIIFGGGPVVIPLLREYVVAE-GWVNPRDFLIGLALIQAFPGPNF-NFAVFLGALTAIGsgnnpvAGAVLA 450
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKrGWLTEEEFLDLLALAQALPGPIAvNLATFIGYKVAGG------LGALVA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  451 WVGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWcvgyidegfqygKSLGADPWWVVVTATSY 530
Cdd:pfam02417  75 TLGFFLPSFLLILLLAPFYERFRDNPLVQAALRGLRAAVVGLIAAAALSLA------------KSALFDLTALLLALAAF 142
                         170       180
                  ....*....|....*....|.
gi 758995664  531 VGGRWFNLKAPVAIILGAIMG 551
Cdd:pfam02417 143 LLLLLFKVNPILVILAAGLLG 163
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
46-211 8.38e-30

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


:

Pssm-ID: 426763  Cd Length: 163  Bit Score: 114.87  E-value: 8.38e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664   46 VFRVNWHLGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFLLWSL 125
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKRGWLTEEEFLDLLALAQALPGPIAVNLATFIGYKVAGGLGALVATLGFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  126 PGAIGMYALAVGVSKIDETlpRPVYALLSGLNAGTVGVIALAAVELSEKAITDrLTRILVFLGATAGMLYNALWyFPVLM 205
Cdd:pfam02417  81 PSFLLILLLAPFYERFRDN--PLVQAALRGLRAAVVGLIAAAALSLAKSALFD-LTALLLALAAFLLLLLFKVN-PILVI 156

                  ....*.
gi 758995664  206 LASGIA 211
Cdd:pfam02417 157 LAAGLL 162
 
Name Accession Description Interval E-value
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
373-551 6.07e-38

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


Pssm-ID: 426763  Cd Length: 163  Bit Score: 137.22  E-value: 6.07e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  373 LFVNMYLAGTIIFGGGPVVIPLLREYVVAE-GWVNPRDFLIGLALIQAFPGPNF-NFAVFLGALTAIGsgnnpvAGAVLA 450
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKrGWLTEEEFLDLLALAQALPGPIAvNLATFIGYKVAGG------LGALVA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  451 WVGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWcvgyidegfqygKSLGADPWWVVVTATSY 530
Cdd:pfam02417  75 TLGFFLPSFLLILLLAPFYERFRDNPLVQAALRGLRAAVVGLIAAAALSLA------------KSALFDLTALLLALAAF 142
                         170       180
                  ....*....|....*....|.
gi 758995664  531 VGGRWFNLKAPVAIILGAIMG 551
Cdd:pfam02417 143 LLLLLFKVNPILVILAAGLLG 163
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
46-211 8.38e-30

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


Pssm-ID: 426763  Cd Length: 163  Bit Score: 114.87  E-value: 8.38e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664   46 VFRVNWHLGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFLLWSL 125
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKRGWLTEEEFLDLLALAQALPGPIAVNLATFIGYKVAGGLGALVATLGFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  126 PGAIGMYALAVGVSKIDETlpRPVYALLSGLNAGTVGVIALAAVELSEKAITDrLTRILVFLGATAGMLYNALWyFPVLM 205
Cdd:pfam02417  81 PSFLLILLLAPFYERFRDN--PLVQAALRGLRAAVVGLIAAAALSLAKSALFD-LTALLLALAAFLLLLLFKVN-PILVI 156

                  ....*.
gi 758995664  206 LASGIA 211
Cdd:pfam02417 157 LAAGLL 162
2A51 TIGR00937
chromate transporter, chromate ion transporter (CHR) family; Members of this family probably ...
53-551 1.51e-27

chromate transporter, chromate ion transporter (CHR) family; Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions]


Pssm-ID: 273350 [Multi-domain]  Cd Length: 368  Bit Score: 114.01  E-value: 1.51e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664   53 LGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFLLWSLPGAIGMY 132
Cdd:TIGR00937   4 LGLLSFGGPVAHAGYMREELVDERQWMSEASYNDLVALAQFLPGPASSQVAIYLGYLLGGIVGAILAGLAFTLPSFLLVV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  133 ALAVGVSKIdETLPrPVYALLSGLNAGTVGVIALAAVELSEKAItdRLTRILVFLgATAGMLYNALWYFPVLMLASGIAT 212
Cdd:TIGR00937  84 ALAWAYVHY-GSLP-AVGAWFYGLQAAVIALIAQAVWKLGKKLV--GPDRLLWGI-ALVTALGTILWPSEWIQLLLGILV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  213 LVhdLRWMHQPISAIvgfgtdlkgklirawpfgkwpgsasdagndnnaavqgrrnsaddeesiemssvakatatassssg 292
Cdd:TIGR00937 159 LV--LGWRRPPAKIP----------------------------------------------------------------- 171
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  293 arpragqqsqlsdlpvteqeastssstgeneprtistefRLDFSWKIGTAIVACFFATFVAVMVTRGvfpnppgLPLLYH 372
Cdd:TIGR00937 172 ---------------------------------------KVWLRQYALVAFLALGLALLALLLPLAD-------SSLASV 205
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  373 LFVNMYLAGTIIFGGGPVVIPLLREYVVAEG-WVNPRDFLIGLALIQAFPGPNFNFAVFLGALTAigsgnnPVAGAVLAW 451
Cdd:TIGR00937 206 LGIFFYKAGALVFGGGYVVVPFLEGGVVDRGnWLTAGQFLDGIALAQITPGPLFITATFIGYLVA------GFPGAIAAT 279
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  452 VGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWCVGYIDegfqygkslgaDPWWVVVTATSYV 531
Cdd:TIGR00937 280 VAIFLPSFLLVLGVLPYFKKLGKNPIIRAFLDGVNAGVVGLLVAATIDLARTSAVD-----------IPTLLVFVSLFAA 348
                         490       500
                  ....*....|....*....|
gi 758995664  532 GGRWFNLKAPVAIILGAIMG 551
Cdd:TIGR00937 349 LLKFKKLPEWVVVLLAALAG 368
ChrA COG2059
Chromate transport protein ChrA [Inorganic ion transport and metabolism];
42-211 9.57e-19

Chromate transport protein ChrA [Inorganic ion transport and metabolism];


Pssm-ID: 224970  Cd Length: 195  Bit Score: 84.22  E-value: 9.57e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  42 RSWNVFRVNWHLGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFL 121
Cdd:COG2059    6 TLLELFFLFLKLGLLGFGGGAAHIPLMRREVVERRKWISEEEFADALAISQLLPGPIATQLAIYVGYKLAGILGALIAGL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 122 LWSLPGAIGMYALAVGVSKIDETlpRPVYALLSGLNAGTVGVIALAAVELSEKAITDRLTRILVFLGATAGMLYNALWYF 201
Cdd:COG2059   86 AFVLPSILIMLGLALLLKRFGDL--PLVKGILKGLKPAIIALVLQAVWRLGKKALKGRGWVGLAVLTVIAILLLPTKFVH 163
                        170
                 ....*....|
gi 758995664 202 PVLMLASGIA 211
Cdd:COG2059  164 PLVIILAGLL 173
ChrA COG2059
Chromate transport protein ChrA [Inorganic ion transport and metabolism];
364-548 9.90e-16

Chromate transport protein ChrA [Inorganic ion transport and metabolism];


Pssm-ID: 224970  Cd Length: 195  Bit Score: 75.75  E-value: 9.90e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 364 PPGLPLLYHLFVNMYLAGTIIFGGGPVVIPLLR-EYVVAEGWVNPRDFLIGLALIQAFPGPN-FNFAVFLGALTAigsgn 441
Cdd:COG2059    1 AQKLMTLLELFFLFLKLGLLGFGGGAAHIPLMRrEVVERRKWISEEEFADALAISQLLPGPIaTQLAIYVGYKLA----- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 442 nPVAGAVLAWVGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWcvgyidegfqyGKSLGADPW 521
Cdd:COG2059   76 -GILGALIAGLAFVLPSILIMLGLALLLKRFGDLPLVKGILKGLKPAIIALVLQAVWRLG-----------KKALKGRGW 143
                        170       180
                 ....*....|....*....|....*..
gi 758995664 522 WVVVTATSYVGGRWFNLKAPVAIILGA 548
Cdd:COG2059  144 VGLAVLTVIAILLLPTKFVHPLVIILA 170
 
Name Accession Description Interval E-value
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
373-551 6.07e-38

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


Pssm-ID: 426763  Cd Length: 163  Bit Score: 137.22  E-value: 6.07e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  373 LFVNMYLAGTIIFGGGPVVIPLLREYVVAE-GWVNPRDFLIGLALIQAFPGPNF-NFAVFLGALTAIGsgnnpvAGAVLA 450
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKrGWLTEEEFLDLLALAQALPGPIAvNLATFIGYKVAGG------LGALVA 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  451 WVGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWcvgyidegfqygKSLGADPWWVVVTATSY 530
Cdd:pfam02417  75 TLGFFLPSFLLILLLAPFYERFRDNPLVQAALRGLRAAVVGLIAAAALSLA------------KSALFDLTALLLALAAF 142
                         170       180
                  ....*....|....*....|.
gi 758995664  531 VGGRWFNLKAPVAIILGAIMG 551
Cdd:pfam02417 143 LLLLLFKVNPILVILAAGLLG 163
Chromate_transp pfam02417
Chromate transporter; Members of this family probably act as chromate transporters. Members of ...
46-211 8.38e-30

Chromate transporter; Members of this family probably act as chromate transporters. Members of this family are found in both bacteria and archaebacteria. The proteins are composed of one or two copies of this region. The alignment contains two conserved motifs, FGG and PGP.


Pssm-ID: 426763  Cd Length: 163  Bit Score: 114.87  E-value: 8.38e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664   46 VFRVNWHLGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFLLWSL 125
Cdd:pfam02417   1 LFLTFLKIGLFSFGGGYAVIPLIQREVVEKRGWLTEEEFLDLLALAQALPGPIAVNLATFIGYKVAGGLGALVATLGFFL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  126 PGAIGMYALAVGVSKIDETlpRPVYALLSGLNAGTVGVIALAAVELSEKAITDrLTRILVFLGATAGMLYNALWyFPVLM 205
Cdd:pfam02417  81 PSFLLILLLAPFYERFRDN--PLVQAALRGLRAAVVGLIAAAALSLAKSALFD-LTALLLALAAFLLLLLFKVN-PILVI 156

                  ....*.
gi 758995664  206 LASGIA 211
Cdd:pfam02417 157 LAAGLL 162
2A51 TIGR00937
chromate transporter, chromate ion transporter (CHR) family; Members of this family probably ...
53-551 1.51e-27

chromate transporter, chromate ion transporter (CHR) family; Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions]


Pssm-ID: 273350 [Multi-domain]  Cd Length: 368  Bit Score: 114.01  E-value: 1.51e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664   53 LGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFLLWSLPGAIGMY 132
Cdd:TIGR00937   4 LGLLSFGGPVAHAGYMREELVDERQWMSEASYNDLVALAQFLPGPASSQVAIYLGYLLGGIVGAILAGLAFTLPSFLLVV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  133 ALAVGVSKIdETLPrPVYALLSGLNAGTVGVIALAAVELSEKAItdRLTRILVFLgATAGMLYNALWYFPVLMLASGIAT 212
Cdd:TIGR00937  84 ALAWAYVHY-GSLP-AVGAWFYGLQAAVIALIAQAVWKLGKKLV--GPDRLLWGI-ALVTALGTILWPSEWIQLLLGILV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  213 LVhdLRWMHQPISAIvgfgtdlkgklirawpfgkwpgsasdagndnnaavqgrrnsaddeesiemssvakatatassssg 292
Cdd:TIGR00937 159 LV--LGWRRPPAKIP----------------------------------------------------------------- 171
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  293 arpragqqsqlsdlpvteqeastssstgeneprtistefRLDFSWKIGTAIVACFFATFVAVMVTRGvfpnppgLPLLYH 372
Cdd:TIGR00937 172 ---------------------------------------KVWLRQYALVAFLALGLALLALLLPLAD-------SSLASV 205
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  373 LFVNMYLAGTIIFGGGPVVIPLLREYVVAEG-WVNPRDFLIGLALIQAFPGPNFNFAVFLGALTAigsgnnPVAGAVLAW 451
Cdd:TIGR00937 206 LGIFFYKAGALVFGGGYVVVPFLEGGVVDRGnWLTAGQFLDGIALAQITPGPLFITATFIGYLVA------GFPGAIAAT 279
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  452 VGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWCVGYIDegfqygkslgaDPWWVVVTATSYV 531
Cdd:TIGR00937 280 VAIFLPSFLLVLGVLPYFKKLGKNPIIRAFLDGVNAGVVGLLVAATIDLARTSAVD-----------IPTLLVFVSLFAA 348
                         490       500
                  ....*....|....*....|
gi 758995664  532 GGRWFNLKAPVAIILGAIMG 551
Cdd:TIGR00937 349 LLKFKKLPEWVVVLLAALAG 368
ChrA COG2059
Chromate transport protein ChrA [Inorganic ion transport and metabolism];
42-211 9.57e-19

Chromate transport protein ChrA [Inorganic ion transport and metabolism];


Pssm-ID: 224970  Cd Length: 195  Bit Score: 84.22  E-value: 9.57e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664  42 RSWNVFRVNWHLGFTAFGGPPVHFRIFNVKFVQKTKWIDEQVYQELFSVSQALSGPGSTKMLYCINLIQDGFLAAVFSFL 121
Cdd:COG2059    6 TLLELFFLFLKLGLLGFGGGAAHIPLMRREVVERRKWISEEEFADALAISQLLPGPIATQLAIYVGYKLAGILGALIAGL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 122 LWSLPGAIGMYALAVGVSKIDETlpRPVYALLSGLNAGTVGVIALAAVELSEKAITDRLTRILVFLGATAGMLYNALWYF 201
Cdd:COG2059   86 AFVLPSILIMLGLALLLKRFGDL--PLVKGILKGLKPAIIALVLQAVWRLGKKALKGRGWVGLAVLTVIAILLLPTKFVH 163
                        170
                 ....*....|
gi 758995664 202 PVLMLASGIA 211
Cdd:COG2059  164 PLVIILAGLL 173
ChrA COG2059
Chromate transport protein ChrA [Inorganic ion transport and metabolism];
364-548 9.90e-16

Chromate transport protein ChrA [Inorganic ion transport and metabolism];


Pssm-ID: 224970  Cd Length: 195  Bit Score: 75.75  E-value: 9.90e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 364 PPGLPLLYHLFVNMYLAGTIIFGGGPVVIPLLR-EYVVAEGWVNPRDFLIGLALIQAFPGPN-FNFAVFLGALTAigsgn 441
Cdd:COG2059    1 AQKLMTLLELFFLFLKLGLLGFGGGAAHIPLMRrEVVERRKWISEEEFADALAISQLLPGPIaTQLAIYVGYKLA----- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 758995664 442 nPVAGAVLAWVGIFSPGLILVHGTMGIWSAVRSKRWVKAVLRGVNASAVGLIYTAVYRIWcvgyidegfqyGKSLGADPW 521
Cdd:COG2059   76 -GILGALIAGLAFVLPSILIMLGLALLLKRFGDLPLVKGILKGLKPAIIALVLQAVWRLG-----------KKALKGRGW 143
                        170       180
                 ....*....|....*....|....*..
gi 758995664 522 WVVVTATSYVGGRWFNLKAPVAIILGA 548
Cdd:COG2059  144 VGLAVLTVIAILLLPTKFVHPLVIILA 170
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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