|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 720.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDPVVQKLWDNILDY 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
2.14e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 371.43 E-value: 2.14e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFHIGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 103 MYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATLTRFF 180
Cdd:COG1290 111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 181 ALH-FLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEK----VPFHSYYTFKDLVGFLIVMFLLSMLALFSPQLltDPE 255
Cdd:COG1290 191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN--PPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 256 NFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQILFWFYVGIF 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 831182080 334 FILTWIGACPVeaPYEQIGQVFTVLYFLYFLL 365
Cdd:COG1290 349 IVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.52e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 262.30 E-value: 2.52e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 10 PILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 90 WFFICIYFHIGRGMYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 831182080 168 GFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.98e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.44 E-value: 3.98e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 19 LVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 99 IGRGMYYG--SYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 831182080 177 TRFFALHFLLPFAIAGLAILHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-341 |
1.37e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPF-SHLGKFRSMSFYPLNQILFWFyvGIFFILt 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFiENVNKFQNPFRRPVATTVFLF--GTVVAL- 141
|
....
gi 831182080 338 WIGA 341
Cdd:TIGR01156 142 WLGI 145
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 720.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDPVVQKLWDNILDY 379
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLVQKLWDNILDY 379
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-367 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 659.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 12 LKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWF 91
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 92 FICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAV 171
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 172 DNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLALFSPQLL 251
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 252 TDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQILFWFYVG 331
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 831182080 332 IFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDP 367
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-378 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 632.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDPVVQKLWDNILD 378
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-379 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 631.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYF-LYFLLDPVVQKLWDNILDY 379
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFtILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 616.93 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 5 IRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALH 84
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 85 ANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEW 164
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 165 VWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLA 244
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQI 324
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 831182080 325 LFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLL 365
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLL 361
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 608.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 5 IRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALH 84
Cdd:MTH00131 4 LRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 85 ANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEW 164
Cdd:MTH00131 84 ANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 165 VWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLA 244
Cdd:MTH00131 164 IWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 245 LFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQI 324
Cdd:MTH00131 244 LFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQF 323
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 831182080 325 LFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLL 365
Cdd:MTH00131 324 LFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLV 364
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 598.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDPVVQKLWDNIL 377
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
3-365 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 593.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 3 SPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRA 82
Cdd:MTH00034 2 GPLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 83 LHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLV 162
Cdd:MTH00034 82 IHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 163 EWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSM 242
Cdd:MTH00034 162 QWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 243 LALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLN 322
Cdd:MTH00034 242 LALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLS 321
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 831182080 323 QILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLL 365
Cdd:MTH00034 322 QIAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLF 364
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 592.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 3 SPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRA 82
Cdd:MTH00100 2 TNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 83 LHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLV 162
Cdd:MTH00100 82 LHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 163 EWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSM 242
Cdd:MTH00100 162 EWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLML 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 243 LALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLN 322
Cdd:MTH00100 242 LVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLS 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 831182080 323 QILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFL-LDPVVQKLWDNIL 377
Cdd:MTH00100 322 QCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILiLMPIASLIENNLL 377
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 552.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFLLDPVVQKLWDNIL 377
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAISKLWDDLL 377
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-377 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 511.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 4 PIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRAL 83
Cdd:MTH00022 2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 84 HANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVE 163
Cdd:MTH00022 82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 164 WVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSML 243
Cdd:MTH00022 162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 244 ALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQ 323
Cdd:MTH00022 242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 831182080 324 ILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFL-LDPVVQKLWDNIL 377
Cdd:MTH00022 322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLvLIPLLGELENQLL 376
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 508.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 1 MRSPIRKVHPILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLL 80
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 81 RALHANGASWFFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKM 160
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 161 LVEWVWGGFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLL 240
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 241 SMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYP 320
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 831182080 321 LNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVFTVLYFLYFL-LDPVVQKLWDNIL 377
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLiLMPLAGYLENKLL 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
11-365 |
7.68e-139 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 400.47 E-value: 7.68e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 11 ILKLVNGaLVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASW 90
Cdd:MTH00033 8 LLEPVND-IIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 91 FFICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFA 170
Cdd:MTH00033 87 FFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFS 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 171 VDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLALFS--P 248
Cdd:MTH00033 167 VSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIEPriE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 249 QLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQILFWF 328
Cdd:MTH00033 247 TLLQDPENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWF 326
|
330 340 350
....*....|....*....|....*....|....*...
gi 831182080 329 YVGIFFILTWIGACPVEA-PYEQIGQVFTVLYFLYFLL 365
Cdd:MTH00033 327 IVGDFIILTWIGSAPAGAdPYVLIGRIATIFYFGYFLV 364
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
23-365 |
2.14e-127 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 371.43 E-value: 2.14e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFHIGRG 102
Cdd:COG1290 31 PFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRG 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 103 MYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATLTRFF 180
Cdd:COG1290 111 FFYGAYKKPRelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFF 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 181 ALH-FLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEK----VPFHSYYTFKDLVGFLIVMFLLSMLALFSPQLltDPE 255
Cdd:COG1290 191 ALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERKKTEkvdgVPFHPYYTVKDGFGFFVFLGVFALLAFFFPIN--PPP 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 256 NFIPANPLVTPVHIQPEWYFLFAYAILRSIP--NKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQILFWFYVGIF 333
Cdd:COG1290 269 NYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTALGVAFIVFF 348
|
330 340 350
....*....|....*....|....*....|..
gi 831182080 334 FILTWIGACPVeaPYEQIGQVFTVLYFLYFLL 365
Cdd:COG1290 349 IVLTILGANPP--IATLLGSINTVTYFAFFLI 378
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-365 |
1.72e-125 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 365.42 E-value: 1.72e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 15 VNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFIC 94
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 95 IYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNA 174
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 175 TLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLsMLALFSPQLLTDP 254
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFI-IFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 255 ENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFshLGKFRSMsFYPLNQILFWFYVGIFF 334
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIF--VNNYTSC-LNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|.
gi 831182080 335 ILTWIGACPVEAPYEQIGQVFTVLYFLYFLL 365
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILL 349
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
12-358 |
1.51e-99 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 299.21 E-value: 1.51e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 12 LKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWF 91
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 92 FICIYFHIGRGMYYGSYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAV 171
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 172 DNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSNNPLGL-NSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLALFSPQL 250
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 251 LTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGgviGLVGSIAILFILPFSHLGKfrSMSFYPLNQILFWFYV 330
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIG---GLVLVLSFLFFLWVPTFNG--SSVYSVWRQVNFWLIV 316
|
330 340
....*....|....*....|....*...
gi 831182080 331 GIFFILTWIGACPVEAPYEQIGQVFTVL 358
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVL 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-207 |
2.52e-87 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 262.30 E-value: 2.52e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 10 PILKLVNGALVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGAS 89
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 90 WFFICIYFHIGRGMYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWG 167
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKKPRelTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 831182080 168 GFAVDNATLTRFFALHFLLPFAIAGLAILHLLFLHETGSN 207
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-205 |
3.98e-78 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 238.44 E-value: 3.98e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 19 LVDLPAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFH 98
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 99 IGRGMYYG--SYVNIHTWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATL 176
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 831182080 177 TRFFALHFLLPFAIAGLAILHLLFLHETG 205
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
208-355 |
2.46e-47 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 157.81 E-value: 2.46e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 208 NPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLALFSPQLLTDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPN 287
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 831182080 288 KLGGVIGLVGSIAILFILPFSHLGKFRSMsFYPLNQILFWFYVGIFFILTWIGACPVEAPYEQIGQVF 355
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
91-254 |
2.03e-43 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 148.54 E-value: 2.03e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 91 FFICIYFHIGRGMYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGG 168
Cdd:pfam13631 3 FIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLFGG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 169 FAVDNATLTRFFALHF-LLPFAIAGLAILHLLFLHETGSNNPLGLNSDGEKVPFHSYYTFKDLVGFLIVMFLLSMLALFS 247
Cdd:pfam13631 83 PFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQIN 162
|
....*..
gi 831182080 248 PQLLTDP 254
Cdd:pfam13631 163 PIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
259-359 |
2.91e-43 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 145.70 E-value: 2.91e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPFSHLGKFRSMSFYPLNQILFWFYVGIFFILTW 338
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 831182080 339 IGACPVEAPYEQIGQVFTVLY 359
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-210 |
6.21e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 135.99 E-value: 6.21e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 23 PAPSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFHIGRG 102
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 103 MYYGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATLTRFF 180
Cdd:PRK03735 113 FFTGGYKKPRelNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 831182080 181 ALH-FLLPFAIAGLAILHLLFLHETGSNNPL 210
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
25-210 |
1.97e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 115.97 E-value: 1.97e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 25 PSNLSIWWNFGSLLGLCLGIQIVTGLFLAMHYTAHVDLAFNSVIHISRDVTYGWLLRALHANGASWFFICIYFHIGRGMY 104
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 105 YGSYVNIH--TWNIGVILLFLTMGTAFLGYVLPWGQMSFWGATVITNLLSAVPYVGKMLVEWVWGGFAVDNATLTRFFAL 182
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*....
gi 831182080 183 H-FLLPFAIAGLAILHLLFLHETGSNNPL 210
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
259-342 |
8.91e-11 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 60.02 E-value: 8.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPF-SHLGKFRSMSFYPLNQILFWFYvgiFFILT 337
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFlENVNKFQNPFRRPVATTVFLIG---TAVAL 141
|
....*..
gi 831182080 338 W--IGAC 342
Cdd:CHL00058 142 WlgIGAT 148
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
237-328 |
9.09e-10 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 57.11 E-value: 9.09e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 237 MFLLSMLALFSPQLLTDPenfipANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPF-SHLGKFRS 315
Cdd:COG5679 49 IALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFiENVNKFQN 123
|
90
....*....|...
gi 831182080 316 MSFYPLNQILFWF 328
Cdd:COG5679 124 PFRRPVATAVFLF 136
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
259-341 |
1.37e-09 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 56.34 E-value: 1.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 831182080 259 PANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIGLVGSIAILFILPF-SHLGKFRSMSFYPLNQILFWFyvGIFFILt 337
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFiENVNKFQNPFRRPVATTVFLF--GTVVAL- 141
|
....
gi 831182080 338 WIGA 341
Cdd:TIGR01156 142 WLGI 145
|
|
| |
