|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00017 |
PTZ00017 |
histone H2A; Provisional |
34-151 |
3.07e-68 |
|
histone H2A; Provisional
Pssm-ID: 185399 Cd Length: 134 Bit Score: 202.67 E-value: 3.07e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDE 113
Cdd:PTZ00017 16 KPVSRSAKAGLQFPVGRVHRYLKKGRYAK-RVGAGAPVYLAAVLEYLTAEVLELAGNAAKDNKKKRITPRHIQLAIRNDE 94
|
90 100 110
....*....|....*....|....*....|....*....
gi 84994758 114 ELDTLV-KATIAGGGVIPHIHKALMNKGPQPVLVKPPKR 151
Cdd:PTZ00017 95 ELNKLLaGVTIASGGVLPNIHKVLLPKKSKPKQGKKQNK 133
|
|
| H2A |
cd00074 |
Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two ... |
34-140 |
1.21e-54 |
|
Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding of specific chromatin-associated proteins.
Pssm-ID: 238029 Cd Length: 115 Bit Score: 167.51 E-value: 1.21e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSAdGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDE 113
Cdd:cd00074 9 KKRSRSARAGLQFPVGRIHRYLKKGRYA-ERVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKKRITPRHLQLAVRNDE 87
|
90 100
....*....|....*....|....*...
gi 84994758 114 ELDTLVK-ATIAGGGVIPHIHKALMNKG 140
Cdd:cd00074 88 ELNKLLKgVTIASGGVLPNIHKVLLPKK 115
|
|
| H2A |
smart00414 |
Histone 2A; |
37-139 |
9.01e-53 |
|
Histone 2A;
Pssm-ID: 197711 Cd Length: 106 Bit Score: 162.50 E-value: 9.01e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 37 SRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD 116
Cdd:smart00414 1 SRSARAGLQFPVGRIHRLLRKGTYAK-RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKRRITPRHLQLAIRNDEELN 79
|
90 100
....*....|....*....|....
gi 84994758 117 TLVKA-TIAGGGVIPHIHKALMNK 139
Cdd:smart00414 80 KLLKGvTIAQGGVLPNIHKVLLPK 103
|
|
| HTA1 |
COG5262 |
Histone H2A [Chromatin structure and dynamics]; |
36-139 |
7.81e-44 |
|
Histone H2A [Chromatin structure and dynamics];
Pssm-ID: 227587 Cd Length: 132 Bit Score: 140.77 E-value: 7.81e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 36 MSRAARAGLQFPVGRVHRMLKsRVSADGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 115
Cdd:COG5262 17 QSRSAKAGLIFPVGRVKRLLK-KGNYRMRIGAGAPVYLAAVLEYLAAEILELAGNAARDNKKKRIIPRHLQLAIRNDEEL 95
|
90 100
....*....|....*....|....*
gi 84994758 116 DTLVK-ATIAGGGVIPHIHKALMNK 139
Cdd:COG5262 96 NKLLGdVTIAQGGVLPNINPGLLPK 120
|
|
| Histone |
pfam00125 |
Core histone H2A/H2B/H3/H4; |
34-112 |
1.53e-16 |
|
Core histone H2A/H2B/H3/H4;
Pssm-ID: 425478 [Multi-domain] Cd Length: 127 Bit Score: 70.91 E-value: 1.53e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSADGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD 112
Cdd:pfam00125 49 KYQKSTDLLIYKLPFARVVREIVKSTKTDLRISADAVVALQEALEDYLVELFEDANLLAKHAKRVTITPKDIQLARRLR 127
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00017 |
PTZ00017 |
histone H2A; Provisional |
34-151 |
3.07e-68 |
|
histone H2A; Provisional
Pssm-ID: 185399 Cd Length: 134 Bit Score: 202.67 E-value: 3.07e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDE 113
Cdd:PTZ00017 16 KPVSRSAKAGLQFPVGRVHRYLKKGRYAK-RVGAGAPVYLAAVLEYLTAEVLELAGNAAKDNKKKRITPRHIQLAIRNDE 94
|
90 100 110
....*....|....*....|....*....|....*....
gi 84994758 114 ELDTLV-KATIAGGGVIPHIHKALMNKGPQPVLVKPPKR 151
Cdd:PTZ00017 95 ELNKLLaGVTIASGGVLPNIHKVLLPKKSKPKQGKKQNK 133
|
|
| PLN00154 |
PLN00154 |
histone H2A; Provisional |
35-139 |
1.35e-65 |
|
histone H2A; Provisional
Pssm-ID: 177756 Cd Length: 136 Bit Score: 195.93 E-value: 1.35e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 35 PMSRAARAGLQFPVGRVHRMLKSRVSADGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE 114
Cdd:PLN00154 28 PTSRSSRAGLQFPVGRIHRQLKQRVSAHGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE 107
|
90 100
....*....|....*....|....*
gi 84994758 115 LDTLVKATIAGGGVIPHIHKALMNK 139
Cdd:PLN00154 108 LDTLIKGTIAGGGVIPHIHKSLINK 132
|
|
| H2A |
cd00074 |
Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two ... |
34-140 |
1.21e-54 |
|
Histone 2A; H2A is a subunit of the nucleosome. The nucleosome is an octamer containing two H2A, H2B, H3, and H4 subunits. The H2A subunit performs essential roles in maintaining structural integrity of the nucleosome, chromatin condensation, and binding of specific chromatin-associated proteins.
Pssm-ID: 238029 Cd Length: 115 Bit Score: 167.51 E-value: 1.21e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSAdGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDE 113
Cdd:cd00074 9 KKRSRSARAGLQFPVGRIHRYLKKGRYA-ERVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKKRITPRHLQLAVRNDE 87
|
90 100
....*....|....*....|....*...
gi 84994758 114 ELDTLVK-ATIAGGGVIPHIHKALMNKG 140
Cdd:cd00074 88 ELNKLLKgVTIASGGVLPNIHKVLLPKK 115
|
|
| H2A |
smart00414 |
Histone 2A; |
37-139 |
9.01e-53 |
|
Histone 2A;
Pssm-ID: 197711 Cd Length: 106 Bit Score: 162.50 E-value: 9.01e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 37 SRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELD 116
Cdd:smart00414 1 SRSARAGLQFPVGRIHRLLRKGTYAK-RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKRRITPRHLQLAIRNDEELN 79
|
90 100
....*....|....*....|....
gi 84994758 117 TLVKA-TIAGGGVIPHIHKALMNK 139
Cdd:smart00414 80 KLLKGvTIAQGGVLPNIHKVLLPK 103
|
|
| HTA1 |
COG5262 |
Histone H2A [Chromatin structure and dynamics]; |
36-139 |
7.81e-44 |
|
Histone H2A [Chromatin structure and dynamics];
Pssm-ID: 227587 Cd Length: 132 Bit Score: 140.77 E-value: 7.81e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 36 MSRAARAGLQFPVGRVHRMLKsRVSADGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 115
Cdd:COG5262 17 QSRSAKAGLIFPVGRVKRLLK-KGNYRMRIGAGAPVYLAAVLEYLAAEILELAGNAARDNKKKRIIPRHLQLAIRNDEEL 95
|
90 100
....*....|....*....|....*
gi 84994758 116 DTLVK-ATIAGGGVIPHIHKALMNK 139
Cdd:COG5262 96 NKLLGdVTIAQGGVLPNINPGLLPK 120
|
|
| PLN00157 |
PLN00157 |
histone H2A; Provisional |
35-139 |
1.59e-37 |
|
histone H2A; Provisional
Pssm-ID: 177758 Cd Length: 132 Bit Score: 124.96 E-value: 1.59e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 35 PMSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE 114
Cdd:PLN00157 16 ATSRSAKAGLQFPVGRIARYLKAGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIVPRHIQLAVRNDEE 94
|
90 100
....*....|....*....|....*.
gi 84994758 115 LDTLVK-ATIAGGGVIPHIHKALMNK 139
Cdd:PLN00157 95 LSKLLGgVTIAAGGVLPNIHSVLLPK 120
|
|
| PLN00156 |
PLN00156 |
histone H2AX; Provisional |
36-139 |
8.26e-37 |
|
histone H2AX; Provisional
Pssm-ID: 215080 Cd Length: 139 Bit Score: 123.15 E-value: 8.26e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 36 MSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 115
Cdd:PLN00156 20 VSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEEL 98
|
90 100
....*....|....*....|....*
gi 84994758 116 DTLVKA-TIAGGGVIPHIHKALMNK 139
Cdd:PLN00156 99 SKLLGSvTIAAGGVLPNIHQTLLPK 123
|
|
| PLN00153 |
PLN00153 |
histone H2A; Provisional |
36-139 |
1.93e-32 |
|
histone H2A; Provisional
Pssm-ID: 165721 Cd Length: 129 Bit Score: 111.73 E-value: 1.93e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 36 MSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEEL 115
Cdd:PLN00153 15 VSRSAKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEEL 93
|
90 100
....*....|....*....|....*
gi 84994758 116 DTLV-KATIAGGGVIPHIHKALMNK 139
Cdd:PLN00153 94 GKLLgEVTIASGGVLPNIHAVLLPK 118
|
|
| PTZ00252 |
PTZ00252 |
histone H2A; Provisional |
37-139 |
7.91e-23 |
|
histone H2A; Provisional
Pssm-ID: 240330 Cd Length: 134 Bit Score: 87.33 E-value: 7.91e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84994758 37 SRAARAGLQFPVGRVHRMLKsRVSADGRVGSTAAVYASAILEYLTAEVLELAGNAS--KDLKVKRITPRHLQLAIRGDEE 114
Cdd:PTZ00252 17 GRSAKAGLIFPVGRVGSLLR-RGQYARRIGASGAVYMAAVLEYLTAELLELSVKAAaqQAKKPKRLTPRTVTLAVRHDDD 95
|
90 100
....*....|....*....|....*.
gi 84994758 115 LDTLVK-ATIAGGGVIPHIHKALMNK 139
Cdd:PTZ00252 96 LGSLLKnVTLSRGGVMPSLNKALAKK 121
|
|
| Histone |
pfam00125 |
Core histone H2A/H2B/H3/H4; |
34-112 |
1.53e-16 |
|
Core histone H2A/H2B/H3/H4;
Pssm-ID: 425478 [Multi-domain] Cd Length: 127 Bit Score: 70.91 E-value: 1.53e-16
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84994758 34 TPMSRAARAGLQFPVGRVHRMLKSRVSADGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGD 112
Cdd:pfam00125 49 KYQKSTDLLIYKLPFARVVREIVKSTKTDLRISADAVVALQEALEDYLVELFEDANLLAKHAKRVTITPKDIQLARRLR 127
|
|
| PLN00155 |
PLN00155 |
histone H2A; Provisional |
36-80 |
5.90e-09 |
|
histone H2A; Provisional
Pssm-ID: 165723 Cd Length: 58 Bit Score: 49.32 E-value: 5.90e-09
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 84994758 36 MSRAARAGLQFPVGRVHRMLKSRVSADgRVGSTAAVYASAILEYL 80
Cdd:PLN00155 15 VSRSAKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYL 58
|
|
| Histone_H2A_C |
pfam16211 |
C-terminus of histone H2A; |
113-139 |
3.24e-08 |
|
C-terminus of histone H2A;
Pssm-ID: 435219 Cd Length: 35 Bit Score: 46.72 E-value: 3.24e-08
10 20
....*....|....*....|....*...
gi 84994758 113 EELDTLVK-ATIAGGGVIPHIHKALMNK 139
Cdd:pfam16211 1 EELNKLLGgVTIAQGGVLPNIHKVLLPK 28
|
|
| BUR6 |
COG5247 |
Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]; |
45-118 |
2.39e-06 |
|
Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription];
Pssm-ID: 227572 Cd Length: 113 Bit Score: 43.80 E-value: 2.39e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84994758 45 QFPVGRVHRMLKSRVSAdGRVGSTAAVYASAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTL 118
Cdd:COG5247 23 RFPIARLKKIMQLDEDI-GKVGQSTPVIASKALEMFLTEIVGLSLKEARKKSSKRMTSEFLKRATESDEKFDFL 95
|
|
|