|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
6-1368 |
0e+00 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 1299.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 6 SDFAPDLYDFIESNNLDEDNLIRAASAAEEgfhtpAAPDLLYGSQGMFGVDDAPLATPAVVIPPPSPAPEP--------- 76
Cdd:PHA03307 1 SDNAPDLYDLIEAAAEGGEFFPRPPATPGD-----AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEpptgpppgp 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 77 ---------------------------------RGGKAKRSPARAAVPASPAHNPAPGLAEMLKMVHSSAATGAGRR--- 120
Cdd:PHA03307 76 gteapanesrstptwslstlapasparegsptpPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPpaa 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 121 ---------DTGSSGGGAYNQGTGSDTETCPGSPGAEFPPSASP---EGRPAPRGRSISISSSSSSSSSTEDQADGAGAS 188
Cdd:PHA03307 156 gaspaavasDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPaaaSPRPPRRSSPISASASSPAPAPGRSAADDAGAS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 189 SSSSSSSEDSDSDDGGEEKTPRPHPSPSAAKTQPATGSPgqisgdriapgsytPKSGRSEKGHQSPVGAFAASTGAPTPS 268
Cdd:PHA03307 236 SSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASG--------------WNGPSSRPGPASSSSSPRERSPSPSPS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 269 NPG-GPLAPGARILEYLEGVRDANLAKTL---EKPDPRMSPPGQSPHRAPKDQRPKSALAGASKRKRCHPRPIPQTAATT 344
Cdd:PHA03307 302 SPGsGPAPSSPRASSSSSSSRESSSSSTSsssESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAAS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 345 GAEEALPGCAWDLLDMNCSSQAPGLGTCQR------------------EPLLTPSGDPWPGSDAPPPGRVRYGGTGDSRD 406
Cdd:PHA03307 382 AGRPTRRRARAAVAGRARRRDATGRFPAGRprpspldagaasgafyarYPLLTPSGEPWPGSPPPPPGRVRYGGLGDSRP 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 407 GLWDDPEIVLAASRYAEAQTAVPVFVPEMGDSTKQYNALVRMVFEN-REAMSWLQNSKLGGADQNLAQFCQKFIHAPRGH 485
Cdd:PHA03307 462 GLWDAPEVREAAARYEASPGPVPVYVPEMGDSAKQYAALVRLLYTPdREAMGWLQNPKLTGPDQALDQFCQKKFQAPRGS 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 486 GSFITGSVANPLPHIGDAMAAGNALWALPHAAASVAMSRRYDRTQKSFILQSLRRAYADMAYPRDDAGRQDSHSAAGVTA 565
Cdd:PHA03307 542 GSFITGSVARPVPHIGDAMAAGNALWALPHAAAAVAMSRRYDRAQKGFLLQSLRRAYAPMAYPENAADTGAGAAAPAPAA 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 566 sypaqaqaasqqPDPPAtsarvreeytrvcaalgprrktAAAGPGtrtpkpTAFRLRELGDVCVLACQAVFEALLRLRGG 645
Cdd:PHA03307 622 ------------PRPDA----------------------AAAGGA------SARPLRELADACVLACRAVLEALLEGPDG 661
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 646 ASAVPGLdpsEIPSPACPPEALCSNPAGLETAACALYELRDLVERARLLGdsDPIHRLGPDELRLAVRAVLVVARTVAPL 725
Cdd:PHA03307 662 LSAVPGL---AFPRPACPPRALEACPARLESWLRELRDLRDAVYLARLRG--DLPVAGGREERVAAVRAVSLVARTVAPL 736
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 726 VRYNAEGARARASAWTITQAVFSIPSLAGGMLGEAVGLLAPPRSQSSSSVggdvgqqqSLSSSEGSQTSRIPALWPTVPG 805
Cdd:PHA03307 737 VRYSPRRARARASAWDITDALFSNPSLVPAKLAEALALLEPAEPQRGAGS--------SPPVRAEAAFRRPGRLRRSGPA 808
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 806 KPLVVPATSHSQSSSPQHQSSGGPTtcsratqTQARPSGQKARSPPAASQailgqempvssqggggpaPYASPNDRPVNG 885
Cdd:PHA03307 809 ADAASRTASKRKSRSHTPDGGSESS-------GPARPPGAAARPPPARSS------------------ESSKSKPAAAGG 863
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 886 RPRGKSGKRRSEPLEPAAGELPGSRGGYDPVAPVESPPAPKRRVgtQAPRALGPMPPEGPHRRGGFRRVPHGDCHTPPPG 965
Cdd:PHA03307 864 RARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRP--APRVKLGPMPPGGPDPRGGFRRVPPGDLHTPAPS 941
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 966 DSARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAREGARFGELAASGPLRRRAAWMNQIPDPEDV 1045
Cdd:PHA03307 942 AAALAAYCPPEVVAELVDHPLFPEPWRPALAFDPEALAEIAARCGGPPPRSGSAFGPLRASGPLRRRAAWMRQIPDPEDV 1021
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1046 KVVVLYSPLPDEDLLGGLPttrPGGSRREPLWSDIKGGLSALLAALGNRVLTKRSHAWAGNWTGPPDVSALNAQGVLLLS 1125
Cdd:PHA03307 1022 RVVVLYSPLPGEHLFGVPA---PDASPGGPAWSPERGGLSFLLAALGNRLCLPDSHAWAGNWTGAPDVSALNAQGVLLLS 1098
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1126 TGDLAFTGCIEYLCLRLGSARRKLLVLDAVSLEDWPQDGPAISQYHIYMRATLTPRVACAVRWPRERHLSRAVLTSSTLF 1205
Cdd:PHA03307 1099 TRDLAFAGAVEYLCLRLGSARRRLIVLDTVDPEDWPADGPAVSQYHVYLRCAVLPRAQCAVRWPAARDLARAVLTSSRVF 1178
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1206 GPGLFARAEAAFARLYPNSEPLKLCRAANVAYTVDTRAGERTRVPLPPREYRQRVLPDYDGCKDMRAQAEGLGFHDPDFE 1285
Cdd:PHA03307 1179 GPGLFARVEAAFARLYPDAPPLRLCRGANVRYTVRTRLGPRTRVPLPPREYRQAVLPALDGCKDMAAQAEGLGLGAPDFL 1258
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1286 EGAAQSHRAANRWGLGAWLRPVYLACGRRGAGAvEPAEllIPELLSEFCRVALLEPDAEAEPLVMPITEAPRR---RAPR 1362
Cdd:PHA03307 1259 EGEAHSHRAANRWGLGAPLRPVYLAEGRRAAIA-GPDE--LPAVVRAFCRAALLEPDPEAPPLVLPPSAAAEAahaRAPR 1335
|
....*.
gi 9629793 1363 VEWEPG 1368
Cdd:PHA03307 1336 VTWAKS 1341
|
|
| Herpes_ICP4_C |
pfam03585 |
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 ... |
949-1374 |
1.81e-145 |
|
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the C-terminal region that probably acts as an enhancer for the N-terminal region.
Pssm-ID: 281570 Cd Length: 444 Bit Score: 450.99 E-value: 1.81e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 949 GGFRRVPHGDCHTPPPGDSARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGP-------------PAR 1015
Cdd:pfam03585 1 GGFRRFPVGTVHTQTPPQSALNAYCPPGAFAELVDFPLFPEPWRPALRFDPEALADIAARVANAlpgggdynsneiiTSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1016 EGARFGELAASGPLRRRAAWMNQIPDPEDVKVVVLYSPLPDEDLLGGLPTTRPggsrrePLWSDIKGGLSALLAALGNRV 1095
Cdd:pfam03585 81 ASRAFGPPTATSKLRRRTAWMRQIPDPEDVRIVVLYSPLPGEDLFCVPAPDTP------PKWSNKRGGLSFLLAALSNRL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1096 LTKRSHAWAGNWTGPPDVSALNAQGVLLLSTGDLAFTGCIEYLCLRLGSARRKLLVLDAVSLEDWPQDGPAISQYHIYMR 1175
Cdd:pfam03585 155 CLPKTSAWAGNWTGAPDVSALTAMGVLLLSTRDLAFAGAVEYLGRQCMKRKRRLIVMDTVEDRYWPPDGPAISEEHTYMK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1176 ATLTPRVACAVRWPRERHLSRAVLTSSTLFGPGLFARAEAAFARLYPNSEPLKLCRAANVAYTVDTRAGERTRVPLPPRE 1255
Cdd:pfam03585 235 CIISPRSQCCVRWPGLLDLGRTVIASRRVFGPLTFARLEQAYAELYPEDSPLNLCRGGNVRYTVETRLGPVTCVPTSPRE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1256 YRQRVLPDYDGCKDMRAQAEGLGFHDPDFEEGAAQSHRAANRWGLGAWLRPVYLACGRRgAGAVEPAELLIPElLSEFCR 1335
Cdd:pfam03585 315 YRAAVLPVFDGCKDLARQSRGLGLGAPDFLCEEAHSHRAARRWGLGAPLRPVYVIEGRM-NAIAGPSFLHVPT-ARNFCR 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 9629793 1336 VALLEPDAEAEPLVMPITEAP------------RRRAPRVEWEPGFGQRST 1374
Cdd:pfam03585 393 SALLEPDPEARPLVLHIPEGTcsalaedmvasaLPPCPRITWGQGFGHEEG 443
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
567-1077 |
5.94e-03 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 41.40 E-value: 5.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 567 YPAQAQAASQQPDPPATSARVREEYTRVCAALGPRRKTAAAGPGTRTPKPTAFRLRELGDVCVLACQAVFEALLRLRGGA 646
Cdd:COG3321 866 YPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAALLAL 945
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 647 SAVPGLDPSEIPSPACPPEALCSNPAGLETAACALYELRDLVERARLLGDSDPIHRLGPDELRLAVRAVLVVARTVAPLV 726
Cdd:COG3321 946 AAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALA 1025
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 727 RYNAEGARARASAWTITQAVFSIPSLAGGMLGEAVGLLAPPRSQSSSSVGGDVGQQQSLSSSEGSQTSRIPALWPTVPGK 806
Cdd:COG3321 1026 ALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAALAAA 1105
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 807 PLVVPATSHSQSSSPQHQSSGGPTTCSRATQTQARPSGQKARSPPAASQAILGQEMPVSSQGGGGPAPYASPNDRPVNGR 886
Cdd:COG3321 1106 LLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALALAAAL 1185
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 887 PRGKSGKRRSEPLEPAAGELPGSRGGYDPVAPVESPPAPKRRVGTQAPRALGPMPPEGPHRRGGFRRVPHGDCHTPPPGD 966
Cdd:COG3321 1186 AAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALAALALL 1265
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 967 SARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAREGARFGELAASGPLRRRAAWMNQIPDPEDVK 1046
Cdd:COG3321 1266 AAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAA 1345
|
490 500 510
....*....|....*....|....*....|.
gi 9629793 1047 VVVLYSPLPDEDLLGGLPTTRPGGSRREPLW 1077
Cdd:COG3321 1346 AAAAAAAAAAAAAAAAALAAAAGAAAAAAAL 1376
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
6-1368 |
0e+00 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 1299.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 6 SDFAPDLYDFIESNNLDEDNLIRAASAAEEgfhtpAAPDLLYGSQGMFGVDDAPLATPAVVIPPPSPAPEP--------- 76
Cdd:PHA03307 1 SDNAPDLYDLIEAAAEGGEFFPRPPATPGD-----AADDLLSGSQGQLVSDSAELAAVTVVAGAAACDRFEpptgpppgp 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 77 ---------------------------------RGGKAKRSPARAAVPASPAHNPAPGLAEMLKMVHSSAATGAGRR--- 120
Cdd:PHA03307 76 gteapanesrstptwslstlapasparegsptpPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPpaa 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 121 ---------DTGSSGGGAYNQGTGSDTETCPGSPGAEFPPSASP---EGRPAPRGRSISISSSSSSSSSTEDQADGAGAS 188
Cdd:PHA03307 156 gaspaavasDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPaaaSPRPPRRSSPISASASSPAPAPGRSAADDAGAS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 189 SSSSSSSEDSDSDDGGEEKTPRPHPSPSAAKTQPATGSPgqisgdriapgsytPKSGRSEKGHQSPVGAFAASTGAPTPS 268
Cdd:PHA03307 236 SSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASG--------------WNGPSSRPGPASSSSSPRERSPSPSPS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 269 NPG-GPLAPGARILEYLEGVRDANLAKTL---EKPDPRMSPPGQSPHRAPKDQRPKSALAGASKRKRCHPRPIPQTAATT 344
Cdd:PHA03307 302 SPGsGPAPSSPRASSSSSSSRESSSSSTSsssESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAAS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 345 GAEEALPGCAWDLLDMNCSSQAPGLGTCQR------------------EPLLTPSGDPWPGSDAPPPGRVRYGGTGDSRD 406
Cdd:PHA03307 382 AGRPTRRRARAAVAGRARRRDATGRFPAGRprpspldagaasgafyarYPLLTPSGEPWPGSPPPPPGRVRYGGLGDSRP 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 407 GLWDDPEIVLAASRYAEAQTAVPVFVPEMGDSTKQYNALVRMVFEN-REAMSWLQNSKLGGADQNLAQFCQKFIHAPRGH 485
Cdd:PHA03307 462 GLWDAPEVREAAARYEASPGPVPVYVPEMGDSAKQYAALVRLLYTPdREAMGWLQNPKLTGPDQALDQFCQKKFQAPRGS 541
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 486 GSFITGSVANPLPHIGDAMAAGNALWALPHAAASVAMSRRYDRTQKSFILQSLRRAYADMAYPRDDAGRQDSHSAAGVTA 565
Cdd:PHA03307 542 GSFITGSVARPVPHIGDAMAAGNALWALPHAAAAVAMSRRYDRAQKGFLLQSLRRAYAPMAYPENAADTGAGAAAPAPAA 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 566 sypaqaqaasqqPDPPAtsarvreeytrvcaalgprrktAAAGPGtrtpkpTAFRLRELGDVCVLACQAVFEALLRLRGG 645
Cdd:PHA03307 622 ------------PRPDA----------------------AAAGGA------SARPLRELADACVLACRAVLEALLEGPDG 661
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 646 ASAVPGLdpsEIPSPACPPEALCSNPAGLETAACALYELRDLVERARLLGdsDPIHRLGPDELRLAVRAVLVVARTVAPL 725
Cdd:PHA03307 662 LSAVPGL---AFPRPACPPRALEACPARLESWLRELRDLRDAVYLARLRG--DLPVAGGREERVAAVRAVSLVARTVAPL 736
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 726 VRYNAEGARARASAWTITQAVFSIPSLAGGMLGEAVGLLAPPRSQSSSSVggdvgqqqSLSSSEGSQTSRIPALWPTVPG 805
Cdd:PHA03307 737 VRYSPRRARARASAWDITDALFSNPSLVPAKLAEALALLEPAEPQRGAGS--------SPPVRAEAAFRRPGRLRRSGPA 808
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 806 KPLVVPATSHSQSSSPQHQSSGGPTtcsratqTQARPSGQKARSPPAASQailgqempvssqggggpaPYASPNDRPVNG 885
Cdd:PHA03307 809 ADAASRTASKRKSRSHTPDGGSESS-------GPARPPGAAARPPPARSS------------------ESSKSKPAAAGG 863
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 886 RPRGKSGKRRSEPLEPAAGELPGSRGGYDPVAPVESPPAPKRRVgtQAPRALGPMPPEGPHRRGGFRRVPHGDCHTPPPG 965
Cdd:PHA03307 864 RARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRP--APRVKLGPMPPGGPDPRGGFRRVPPGDLHTPAPS 941
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 966 DSARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAREGARFGELAASGPLRRRAAWMNQIPDPEDV 1045
Cdd:PHA03307 942 AAALAAYCPPEVVAELVDHPLFPEPWRPALAFDPEALAEIAARCGGPPPRSGSAFGPLRASGPLRRRAAWMRQIPDPEDV 1021
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1046 KVVVLYSPLPDEDLLGGLPttrPGGSRREPLWSDIKGGLSALLAALGNRVLTKRSHAWAGNWTGPPDVSALNAQGVLLLS 1125
Cdd:PHA03307 1022 RVVVLYSPLPGEHLFGVPA---PDASPGGPAWSPERGGLSFLLAALGNRLCLPDSHAWAGNWTGAPDVSALNAQGVLLLS 1098
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1126 TGDLAFTGCIEYLCLRLGSARRKLLVLDAVSLEDWPQDGPAISQYHIYMRATLTPRVACAVRWPRERHLSRAVLTSSTLF 1205
Cdd:PHA03307 1099 TRDLAFAGAVEYLCLRLGSARRRLIVLDTVDPEDWPADGPAVSQYHVYLRCAVLPRAQCAVRWPAARDLARAVLTSSRVF 1178
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1206 GPGLFARAEAAFARLYPNSEPLKLCRAANVAYTVDTRAGERTRVPLPPREYRQRVLPDYDGCKDMRAQAEGLGFHDPDFE 1285
Cdd:PHA03307 1179 GPGLFARVEAAFARLYPDAPPLRLCRGANVRYTVRTRLGPRTRVPLPPREYRQAVLPALDGCKDMAAQAEGLGLGAPDFL 1258
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1286 EGAAQSHRAANRWGLGAWLRPVYLACGRRGAGAvEPAEllIPELLSEFCRVALLEPDAEAEPLVMPITEAPRR---RAPR 1362
Cdd:PHA03307 1259 EGEAHSHRAANRWGLGAPLRPVYLAEGRRAAIA-GPDE--LPAVVRAFCRAALLEPDPEAPPLVLPPSAAAEAahaRAPR 1335
|
....*.
gi 9629793 1363 VEWEPG 1368
Cdd:PHA03307 1336 VTWAKS 1341
|
|
| Herpes_ICP4_C |
pfam03585 |
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 ... |
949-1374 |
1.81e-145 |
|
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the C-terminal region that probably acts as an enhancer for the N-terminal region.
Pssm-ID: 281570 Cd Length: 444 Bit Score: 450.99 E-value: 1.81e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 949 GGFRRVPHGDCHTPPPGDSARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGP-------------PAR 1015
Cdd:pfam03585 1 GGFRRFPVGTVHTQTPPQSALNAYCPPGAFAELVDFPLFPEPWRPALRFDPEALADIAARVANAlpgggdynsneiiTSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1016 EGARFGELAASGPLRRRAAWMNQIPDPEDVKVVVLYSPLPDEDLLGGLPTTRPggsrrePLWSDIKGGLSALLAALGNRV 1095
Cdd:pfam03585 81 ASRAFGPPTATSKLRRRTAWMRQIPDPEDVRIVVLYSPLPGEDLFCVPAPDTP------PKWSNKRGGLSFLLAALSNRL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1096 LTKRSHAWAGNWTGPPDVSALNAQGVLLLSTGDLAFTGCIEYLCLRLGSARRKLLVLDAVSLEDWPQDGPAISQYHIYMR 1175
Cdd:pfam03585 155 CLPKTSAWAGNWTGAPDVSALTAMGVLLLSTRDLAFAGAVEYLGRQCMKRKRRLIVMDTVEDRYWPPDGPAISEEHTYMK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1176 ATLTPRVACAVRWPRERHLSRAVLTSSTLFGPGLFARAEAAFARLYPNSEPLKLCRAANVAYTVDTRAGERTRVPLPPRE 1255
Cdd:pfam03585 235 CIISPRSQCCVRWPGLLDLGRTVIASRRVFGPLTFARLEQAYAELYPEDSPLNLCRGGNVRYTVETRLGPVTCVPTSPRE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 1256 YRQRVLPDYDGCKDMRAQAEGLGFHDPDFEEGAAQSHRAANRWGLGAWLRPVYLACGRRgAGAVEPAELLIPElLSEFCR 1335
Cdd:pfam03585 315 YRAAVLPVFDGCKDLARQSRGLGLGAPDFLCEEAHSHRAARRWGLGAPLRPVYVIEGRM-NAIAGPSFLHVPT-ARNFCR 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 9629793 1336 VALLEPDAEAEPLVMPITEAP------------RRRAPRVEWEPGFGQRST 1374
Cdd:pfam03585 393 SALLEPDPEARPLVLHIPEGTcsalaedmvasaLPPCPRITWGQGFGHEEG 443
|
|
| Herpes_ICP4_N |
pfam03584 |
Herpesvirus ICP4-like protein N-terminal region; The immediate-early protein ICP4 ... |
391-548 |
1.15e-61 |
|
Herpesvirus ICP4-like protein N-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the N-terminal region that contains sites for DNA binding and homodimerization.
Pssm-ID: 367571 [Multi-domain] Cd Length: 163 Bit Score: 207.76 E-value: 1.15e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 391 PPPGRVRYGGTGDSRDGLWDDPEIVLAASRYAEAQTAVPVFVPEMGDSTKQYNALVRMVFE-NREAMSWLQNSKLGGADQ 469
Cdd:pfam03584 2 PPPGRVLYGGLGDSRPGLWGAPEVREARARFEASGAPAPVYVPELGDAAQQYAALVNLLYTpDAEPLGWLQNPRLNPGDV 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 9629793 470 NLAQFCQKFIHAPRGHGSFITGSVANPLPHIGDAMAAGNALWALPHAAASVAMSRRYDRTQKSFILQSLRRAYADMAYP 548
Cdd:pfam03584 82 ALNQICQKISGAARNSGSAVTGSVARAVPHIGYAMAAGRALWALPHAAAAVAMSRRYDRAQKTFLLTSLRRAYAPLAFP 160
|
|
| PHA03308 |
PHA03308 |
transcriptional regulator ICP4; Provisional |
390-568 |
8.98e-12 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165563 [Multi-domain] Cd Length: 1463 Bit Score: 70.22 E-value: 8.98e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 390 APPPGRVRYGGTGdSRDGLWDDPEIVLAASRYAEAQTAVPVFVPEMGDSTKQYNALVR--MVFENREAMSWLQNSKLGGA 467
Cdd:PHA03308 357 SPPSRGQVYHGSG-YRQSLVDDPQVREAAAEFHANPKSASVYLEEYGMPVEQLERLVEefMVHPLSRVSYGYGGPKLSPR 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 468 DQNLAQFCqkfihAPRGHGSFITG----SVANPLPHIGDAMAAGNALWALPHAAASVAMSRRYDRTQKSFILQSLRRAYA 543
Cdd:PHA03308 436 DKRLCELC-----ALRGPGSSEGGlsrsAVPTCLPHVAHAMRDGRVSLALPHLTELVRVCRRYDHPQKTYLLAALRRAFV 510
|
170 180
....*....|....*....|....*
gi 9629793 544 DMAYPrddaGRQDSHSAAGVTASYP 568
Cdd:PHA03308 511 PFVFP----GAAVDPTAASASGDHP 531
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
391-548 |
4.40e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 58.33 E-value: 4.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 391 PPPGRVRYGGTGDSRDGLWDDPEIVLAASRYAEAQTAVPVFVPEMGDSTKQYNALVR--MVFENREAMSWLQNSKLGGAD 468
Cdd:PHA03309 632 PPAADYVYYGKTGYRPSMAAHPDVRRAAEEFSASDAAARVYVEEFGMAVEQHERLVAefMLQPLSRVSHSYGGSRLNKTE 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 469 QNLAQFCQK-----------FIHAPRGHGSFITG--SVANPLPHIGDAMAAGNALWALPHAAASVAMSRRYDRTQKSFIL 535
Cdd:PHA03309 712 KNLCKICLPpdggddrdgggKSRGGRGGGSKDASrtAMATGVPHIVHAMRDGRAALALPHLMDVIRVCRRYDASQKTYLL 791
|
170
....*....|...
gi 9629793 536 QSLRRAYADMAYP 548
Cdd:PHA03309 792 SCLRLAFAPLVFP 804
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
650-1058 |
4.05e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 4.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 650 PGLDPSEIPSPACPPEALCSNPAGLETAACALYEL---RDLVERARLLGDSDPIHRLGPDELRLAVRAVLVVARTVAPlv 726
Cdd:PHA03247 2627 PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVsrpRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPP-- 2704
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 727 rynAEGARARASAWTITQAVFSIPSLAGGMLGEAVGLLAPPRSQSSSSVGGDVGQQQSLSSSEGSQTSRIPALWPTVPGK 806
Cdd:PHA03247 2705 ---PPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPR 2781
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 807 PLVVPATSHSQSSSPQHQSSGGPTTCSRATQtqARPSGQKARSPPAASQAILGQEMPVSSQGGGGP-APYASPNDRPVNG 885
Cdd:PHA03247 2782 RLTRPAVASLSESRESLPSPWDPADPPAAVL--APAAALPPAASPAGPLPPPTSAQPTAPPPPPGPpPPSLPLGGSVAPG 2859
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 886 RPRGKSGKRRSEPLEPAAGELPGSRGGYDPVAPVESPPAPKRRVGTQAPRAlgPMPPEGPHRRGGFRRVPHGDCHTPPPG 965
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQ--PQAPPPPQPQPQPPPPPQPQPPPPPPP 2937
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 966 DSARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAREGARFGELAASGPLRRRAAWMNQI-----P 1040
Cdd:PHA03247 2938 RPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLalheeT 3017
|
410
....*....|....*....
gi 9629793 1041 DPEDVKVV-VLYSPLPDED 1058
Cdd:PHA03247 3018 DPPPVSLKqTLWPPDDTED 3036
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
786-1027 |
1.10e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.33 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 786 SSSEGSQTSRIPALWPTVPGKPLVVPATSHSQSSSPQHQSSGGPTTCSRATQTQArpSGQKARSPPAASQAILGQEMPvs 865
Cdd:PRK12323 366 GQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVA--AAPARRSPAPEALAAARQASA-- 441
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 866 SQGGGGPAPYASPNDRPVNGRPRgksgkrrseplePAAGELPgsrggydPVAPVESPPAPKRRVGTQAPRALGPMPPEgp 945
Cdd:PRK12323 442 RGPGGAPAPAPAPAAAPAAAARP------------AAAGPRP-------VAAAAAAAPARAAPAAAPAPADDDPPPWE-- 500
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 946 hrrggfrRVPhGDCHTPPPGDSARAaycPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAR-EGARFGELA 1024
Cdd:PRK12323 501 -------ELP-PEFASPAPAQPDAA---PAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPvVAPRPPRAS 569
|
...
gi 9629793 1025 ASG 1027
Cdd:PRK12323 570 ASG 572
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
142-397 |
1.21e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 142 PGSPGAEFPPSASPEGRPAP----RGRSISISSSSSSSSSTEDQADGAGASSSSSSSSEDSDSDDGGEEKTPRPHPSPSA 217
Cdd:PHA03247 2639 DPHPPPTVPPPERPRDDPAPgrvsRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSA 2718
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 218 AKTQPATGSPGQIS-GDRIAPGSYTPKSGRSEKGHQSPVGAFAASTGAPTPSNPGGPLAPGARILEYLEGVRDANLAKTL 296
Cdd:PHA03247 2719 TPLPPGPAAARQASpALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 297 ekPDPRMSPPGQSPHRAPKDQRPKSALAGASKRKRCHPRPIPQTAATTGAEEALPGCAWdlldmncssQAPGlGTCQREP 376
Cdd:PHA03247 2799 --PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGS---------VAPG-GDVRRRP 2866
|
250 260
....*....|....*....|.
gi 9629793 377 lltPSGDPWPGSDAPPPGRVR 397
Cdd:PHA03247 2867 ---PSRSPAAKPAAPARPPVR 2884
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
554-976 |
1.30e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 554 RQDSHSAAGVTASYPAQAQAASQQPDPPATSARVREEYTRVCAALGPRRKTAAAGPGTRTPKPTAFRLRELGDVCVLACQ 633
Cdd:PRK07764 380 RLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 634 AVFEALLRLRGGASAVPGLDPSEIPSPACPPEALCSNPAGLETAACALY---------ELRDLVERARLLgdsdpIHRLG 704
Cdd:PRK07764 460 AAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDaatlrerwpEILAAVPKRSRK-----TWAIL 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 705 PDELRLA-VRA-VLVVARTVAPLVRYNAEGARARAsawtITQAVfsipslaGGMLGEAVGLLApprsqsssSVGGDVGqq 782
Cdd:PRK07764 535 LPEATVLgVRGdTLVLGFSTGGLARRFASPGNAEV----LVTAL-------AEELGGDWQVEA--------VVGPAPG-- 593
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 783 qslssseGSQTSRIPALWPTVPGKPLVVPATSHSQSSSPQHQSSGGPTTCSRATQTQARPSGQKARSPPAASQAILGQEM 862
Cdd:PRK07764 594 -------AAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 863 PVSSQGGGGPAPyASPNDRPVNGRPRGKSGKRRSEPLEPAAGELPGSRGgydPVAPVESPPAPKRRVGTQAPRALGPMPP 942
Cdd:PRK07764 667 DGWPAKAGGAAP-AAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQA---DDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
410 420 430
....*....|....*....|....*....|....
gi 9629793 943 EGPHRRGGFRRVPHGDCHTPPPGDSARAAYCPPE 976
Cdd:PRK07764 743 PEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPP 776
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
567-1077 |
5.94e-03 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 41.40 E-value: 5.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 567 YPAQAQAASQQPDPPATSARVREEYTRVCAALGPRRKTAAAGPGTRTPKPTAFRLRELGDVCVLACQAVFEALLRLRGGA 646
Cdd:COG3321 866 YPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAAALLAL 945
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 647 SAVPGLDPSEIPSPACPPEALCSNPAGLETAACALYELRDLVERARLLGDSDPIHRLGPDELRLAVRAVLVVARTVAPLV 726
Cdd:COG3321 946 AAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALALLAAAALLLAAAAAAAALLALA 1025
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 727 RYNAEGARARASAWTITQAVFSIPSLAGGMLGEAVGLLAPPRSQSSSSVGGDVGQQQSLSSSEGSQTSRIPALWPTVPGK 806
Cdd:COG3321 1026 ALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAALAAAALALALAALAAA 1105
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 807 PLVVPATSHSQSSSPQHQSSGGPTTCSRATQTQARPSGQKARSPPAASQAILGQEMPVSSQGGGGPAPYASPNDRPVNGR 886
Cdd:COG3321 1106 LLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAAAALLLALALALAAAL 1185
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 887 PRGKSGKRRSEPLEPAAGELPGSRGGYDPVAPVESPPAPKRRVGTQAPRALGPMPPEGPHRRGGFRRVPHGDCHTPPPGD 966
Cdd:COG3321 1186 AAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAAAAAALLAALAALALL 1265
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 967 SARAAYCPPELVAELIDHPLFPEAWRPALTFDPQALATIAARCNGPPAREGARFGELAASGPLRRRAAWMNQIPDPEDVK 1046
Cdd:COG3321 1266 AAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAALAALAAAVAAALALAA 1345
|
490 500 510
....*....|....*....|....*....|.
gi 9629793 1047 VVVLYSPLPDEDLLGGLPTTRPGGSRREPLW 1077
Cdd:COG3321 1346 AAAAAAAAAAAAAAAAALAAAAGAAAAAAAL 1376
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
83-310 |
8.06e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 8.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 83 RSPARAAVPASPAHNPA----PGLAEMLKMVHSSAATGAGRRDTGSSGGGAYNQGTGSDTETCPGSPGAEFPPSASPeGR 158
Cdd:PHA03378 695 QPPPRAPTPMRPPAAPPgraqRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAP-GA 773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 159 PAP------------RGRSISISSSSSSSSSTEDQADGAGASSSSSSSSEDSDSDDGGEEKTPRPHPS-PSAAKTQPATG 225
Cdd:PHA03378 774 PTPqpppqappapqqRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKkPAALERQAAAG 853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 226 ---SPGQISGDRI--APGSYTPKSGRSE----KGHQSPVGAfAASTGAPT----PSNPGGPLAPgarileylEGVRDANL 292
Cdd:PHA03378 854 ptpSPGSGTSDKIvqAPVFYPPVLQPIQvmrqLGSVRAAAA-STVTQAPTeytgERRGVGPMHP--------TDIPPSKR 924
|
250
....*....|....*...
gi 9629793 293 AKTLEKPDPRMSPPGQSP 310
Cdd:PHA03378 925 AKTDAYVESQPPHGGQSH 942
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
801-1050 |
9.02e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 9.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 801 PTVPGKPLVVPATS-HSQSSSPQHQSSGGPTTCSRATQTQARPSGQKARSPPAASQAILGQEMPVSSqggggPAPYASPN 879
Cdd:PHA03247 2551 PPPPLPPAAPPAAPdRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPL-----PPDTHAPD 2625
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 880 DRPVNGRPRGksgkrrSEPLEPAAGELPGSRGGYDPVAPveSPPAPKRRVGTQAPRALGPMPPEGPHRRGGFRRV----- 954
Cdd:PHA03247 2626 PPPPSPSPAA------NEPDPHPPPTVPPPERPRDDPAP--GRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVgslts 2697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9629793 955 -----PHGDCHTPPPGDSARAAYCPPELVAELIDHPLFPEA-------------------WRPALTFDPQALATIAARCN 1010
Cdd:PHA03247 2698 ladppPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAApappavpagpatpggparpARPPTTAGPPAPAPPAAPAA 2777
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 9629793 1011 GPPAREGArfgelAASGPLRRRAAWMNQIPDPEDVKVVVL 1050
Cdd:PHA03247 2778 GPPRRLTR-----PAVASLSESRESLPSPWDPADPPAAVL 2812
|
|
| |
