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actin-related protein 3B isoform 1 [Mus musculus]
Protein Classification
actin-related protein 3 ( domain architecture ID 1003867 )
actin-related protein 3 (ACTR3) is an ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF)
List of domain hits
Name
Accession
Description
Interval
E-value
PTZ00280 super family
cl29668
Actin-related protein 3; Provisional
2-417
0e+00
Actin-related protein 3; Provisional
The actual alignment was detected with superfamily member PTZ00280 :Pssm-ID: 240343
Cd Length: 414
Bit Score: 718.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 2 A GS LP PC V V D C GTGYTK L GYAGNTEP QF IIP SC IA IRESAKV vdqaq RR VLR G VD DLDF F IGDEA IDKP - T Y ATKW P IR H 80
Cdd:PTZ00280 1 A ST LP VV V I D N GTGYTK M GYAGNTEP TY IIP TL IA DNSKQSR ----- RR SKK G FE DLDF Y IGDEA LAAS k S Y TLTY P MK H 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 81 GIVEDWDLME R F M EQ VV FKYLR A EPE D HYF LM TEPP L N T PENREY L AEIMFE S FNV P GLYIAVQAVLAL A ASWTS RQVG E 160
Cdd:PTZ00280 76 GIVEDWDLME K F W EQ CI FKYLR C EPE E HYF IL TEPP M N P PENREY T AEIMFE T FNV K GLYIAVQAVLAL R ASWTS KKAK E 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 161 R -- TLTG I VIDSGDGVTHVIPV AE GYVIGS C IKHIP I AGRDIT Y FIQQ L LRER EVG IP P E QS L ET A KA IKEKYCY IC PDI 238
Cdd:PTZ00280 156 L gg TLTG T VIDSGDGVTHVIPV VD GYVIGS S IKHIP L AGRDIT N FIQQ M LRER GEP IP A E DI L LL A QR IKEKYCY VA PDI 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 239 VR EF A KYD V DP RKWI K Q YT GI N AINQ K KFII DVGYERFLGPE I FFHPE FANPDFMESISD VVD EV IQSCPID V RRPLYKN 318
Cdd:PTZ00280 236 AK EF E KYD S DP KNHF K K YT AV N SVTK K PYTV DVGYERFLGPE M FFHPE IFSSEWTTPLPE VVD DA IQSCPID C RRPLYKN 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 319 V VLSGGSTMF RD F GR RLQRD LKRV VD A RLK LSQ ELSGG RI KP K P VE V Q VV T H HM QRYAVW F GGSMLAS T PEF FQ VCHTK K 398
Cdd:PTZ00280 316 I VLSGGSTMF KG F DK RLQRD VRKR VD R RLK KAE ELSGG KL KP I P ID V N VV S H PR QRYAVW Y GGSMLAS S PEF EK VCHTK A 395
410
....*....|....*....
gi 52345394 399 D Y E EYGPSICR H N P VF GVM 417
Cdd:PTZ00280 396 E Y D EYGPSICR Y N N VF HSV 414
Name
Accession
Description
Interval
E-value
PTZ00280
PTZ00280
Actin-related protein 3; Provisional
2-417
0e+00
Actin-related protein 3; Provisional
Pssm-ID: 240343
Cd Length: 414
Bit Score: 718.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 2 A GS LP PC V V D C GTGYTK L GYAGNTEP QF IIP SC IA IRESAKV vdqaq RR VLR G VD DLDF F IGDEA IDKP - T Y ATKW P IR H 80
Cdd:PTZ00280 1 A ST LP VV V I D N GTGYTK M GYAGNTEP TY IIP TL IA DNSKQSR ----- RR SKK G FE DLDF Y IGDEA LAAS k S Y TLTY P MK H 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 81 GIVEDWDLME R F M EQ VV FKYLR A EPE D HYF LM TEPP L N T PENREY L AEIMFE S FNV P GLYIAVQAVLAL A ASWTS RQVG E 160
Cdd:PTZ00280 76 GIVEDWDLME K F W EQ CI FKYLR C EPE E HYF IL TEPP M N P PENREY T AEIMFE T FNV K GLYIAVQAVLAL R ASWTS KKAK E 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 161 R -- TLTG I VIDSGDGVTHVIPV AE GYVIGS C IKHIP I AGRDIT Y FIQQ L LRER EVG IP P E QS L ET A KA IKEKYCY IC PDI 238
Cdd:PTZ00280 156 L gg TLTG T VIDSGDGVTHVIPV VD GYVIGS S IKHIP L AGRDIT N FIQQ M LRER GEP IP A E DI L LL A QR IKEKYCY VA PDI 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 239 VR EF A KYD V DP RKWI K Q YT GI N AINQ K KFII DVGYERFLGPE I FFHPE FANPDFMESISD VVD EV IQSCPID V RRPLYKN 318
Cdd:PTZ00280 236 AK EF E KYD S DP KNHF K K YT AV N SVTK K PYTV DVGYERFLGPE M FFHPE IFSSEWTTPLPE VVD DA IQSCPID C RRPLYKN 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 319 V VLSGGSTMF RD F GR RLQRD LKRV VD A RLK LSQ ELSGG RI KP K P VE V Q VV T H HM QRYAVW F GGSMLAS T PEF FQ VCHTK K 398
Cdd:PTZ00280 316 I VLSGGSTMF KG F DK RLQRD VRKR VD R RLK KAE ELSGG KL KP I P ID V N VV S H PR QRYAVW Y GGSMLAS S PEF EK VCHTK A 395
410
....*....|....*....
gi 52345394 399 D Y E EYGPSICR H N P VF GVM 417
Cdd:PTZ00280 396 E Y D EYGPSICR Y N N VF HSV 414
ACTIN
smart00268
Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
6-412
1.73e-153
Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Pssm-ID: 214592 [Multi-domain]
Cd Length: 373
Bit Score: 438.62
E-value: 1.73e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 6 P PC V V D C G T G YT K L G Y AG NTE PQ FII PS CIA iresakvvd QAQRRVLRGV D DL D F F I GDEA ID K PTYAT - K W PI RH GIVE 84
Cdd:smart00268 2 P AI V I D N G S G TI K A G F AG EDF PQ VVF PS IVG --------- RPKDGKGMVG D AK D I F V GDEA QE K RGGLE l K Y PI EN GIVE 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 85 D WD L ME RFMEQVV F KY LR A EPE D H YF L M TEPP L N TPE NRE YLA EIMFE S FN V P G LYIA V QAVL A L A AS WTS rqvgertl T 164
Cdd:smart00268 73 N WD D ME KIWDYTF F NE LR V EPE E H PV L L TEPP M N PKS NRE KIL EIMFE T FN F P A LYIA I QAVL S L Y AS GRT -------- T 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 165 G I VIDSGDGVTHV I PV AE GYV IGSC IK H I P IAGRDIT YFIQQ LL R ER EVGIPPEQSL E TAKA IKEK Y CY ICP D IVR E FAK 244
Cdd:smart00268 145 G L VIDSGDGVTHV V PV VD GYV LPHA IK R I D IAGRDIT DYLKE LL S ER GYQFNSSAEF E IVRE IKEK L CY VAE D FEK E MKL 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 245 YD vdp RKWIKQYTGINAINQKKFI I D VG Y ERF LG PEI F F H PE FANPDF m ES I SDV V D E V IQ S C P IDVR RP LY K N V VLSGG 324
Cdd:smart00268 225 AR --- ESSESSKLEKTYELPDGNT I K VG N ERF RI PEI L F S PE LIGLEQ - KG I HEL V Y E S IQ K C D IDVR KD LY E N I VLSGG 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 325 ST MFRD FG R RL QRD LK RVV darlklsqelsggrik PK PVE V Q V VTHHMQR Y A VW F GGS M LAS TPE F FQVCH TKK D YEE Y G 404
Cdd:smart00268 301 ST LIPG FG E RL EKE LK QLA ---------------- PK KLK V K V IAPPERK Y S VW L GGS I LAS LST F EDMWI TKK E YEE S G 364
....*...
gi 52345394 405 PS I CRHNP 412
Cdd:smart00268 365 SQ I VERKC 372
COG5277
COG5277
Actin-related protein [Cytoskeleton];
1-410
6.17e-105
Actin-related protein [Cytoskeleton];
Pssm-ID: 227602 [Multi-domain]
Cd Length: 444
Bit Score: 317.44
E-value: 6.17e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 1 M A G SLP P CV V - D C G T G Y TK L G Y AGN TE P QFII PS CIAI R ES akvvdqa QRR V LRGVDDL D FFI G D EA --- I D KPTYATKW 76
Cdd:COG5277 1 M T G DNV P TI V i D N G S G T TK A G F AGN DT P TTVF PS IVGR R RD ------- EDS V MEDTEEK D TYV G N EA qnd R D NSLLELRY 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 77 PI RH GI VED WD L ME RFMEQVV F K -- Y L RAE PE D H YF L M TEPPLN T P E NRE YLA E IM FE SF NVP G LY I A V QAVL A L A AS WT 154
Cdd:COG5277 74 PI EN GI ILN WD A ME QIWDYTF F N kg D L LPS PE E H PL L L TEPPLN P P S NRE KIT E LL FE TL NVP A LY L A I QAVL S L Y AS GS 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 155 S rqvger TL TG I VIDSGD G VTHVIPV AE G Y V IGSCI K H I P I A GRDIT YFIQQ LLRE REVGIP -------- P E Q S L E TAKA 226
Cdd:COG5277 154 S ------ DE TG L VIDSGD S VTHVIPV VD G I V LPKAV K R I D I G GRDIT DYLKK LLRE KYPPSR gynlksel V E Y S S E IVNE 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 227 IKE KY C ------- Y ICP D IVR EF AKYDVD P RKWIKQY T GIN ---- A I NQKKFI ------ I DV G Y E - RF LG PEI F F H PE -- 286
Cdd:COG5277 228 IKE EV C etddesa Y VSL D AEE EF EEEEEK P AEKSTES T FQL sket S I AKESKE lpdgee I EF G N E e RF KA PEI L F K PE lp 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 287 ------------------ FA N PDFMES -------- ISDV V DEV IQ S C PI DVR RP LY K N V VL S GG STMFRD F GR RLQ RD L K 340
Cdd:COG5277 308 isgleeagkideskqelv AE N YEISPT nlgndiag LPEL V YQS IQ I C DE DVR KS LY S N I VL T GG TSKIPG F AE RLQ KE L T 387
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 341 rvvdarlklsqelsgg RIK P KPVE V Q V VTHHMQRYAV W F G G S M LAS TPE F F Q VCH TK KD YEE Y GP S I CRH 410
Cdd:COG5277 388 ---------------- SLA P SIWK V S V IPPPDPSLDA W L G A S I LAS LET F Q Q LWI TK EE YEE H GP D I LQE 441
Actin
pfam00022
Actin;
6-409
7.06e-97
Actin;
Pssm-ID: 394979 [Multi-domain]
Cd Length: 407
Bit Score: 295.75
E-value: 7.06e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 6 PPC V V D C G TGY T KL G Y AG NTE P QFI IPSC IAIRESA KV VD qaqrrvlrgvd DLDFFI GDEA IDK - P TYATKW P IRH GIV E 84
Cdd:pfam00022 2 SAL V I D N G SHT T RA G F AG EDA P KAV IPSC VGKPRGT KV EA ----------- ANKYYV GDEA LTY r P GMEVRS P VED GIV V 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 85 DWD L ME RFM E Q V VFKY L RAE PE D H YF L M TEPP L N T P E NRE YL AEIMFE S F N VP G LY I avqavl A LAASWTSRQV G e RT l T 164
Cdd:pfam00022 71 DWD A ME EIW E H V LKEE L QVD PE E H PL L L TEPP W N P P A NRE KA AEIMFE K F G VP A LY L ------ A KNPVLSAFAS G - RT - T 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 165 G I V I DSG D GVT H V I PV AE GYV IGSC I KHIPIA G RDI T YFIQQ LLR E R EVG I P P EQSLETA K A ------------------ 226
Cdd:pfam00022 143 G L V V DSG A GVT S V V PV HD GYV LQKA I RRSDLG G DFL T DYLRE LLR S R NIE I T P RYLIKSK K P gdpapavtkrelpdttys 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 227 ------------ IKE KY CY ICP D IVREFAKY dvdprkwikqytgi NA I NQKKFI ------ I DV G Y ERF LG PEI F F H P EFA 288
Cdd:pfam00022 223 yktyqerrvlee IKE SV CY VSD D PFGDETTS -------------- SS I PTRVYE lpdgst I IL G A ERF RV PEI L F N P SLI 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 289 NPD ------- FMES I SDVVDEV I QS C PI D V R RP L YK N V V LS GG STM F RD F GR RL QRD L KRVV darlklsqe LS G GRI K PK 361
Cdd:pfam00022 289 GSE selpppq TAVG I PELIVDA I NA C DV D L R PS L LA N I V VT GG NSL F PG F TE RL EKE L AQLA --------- PP G VKV K II 359
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 52345394 362 PVEVQ V VT hhmq RY AV W F GGS M LAS TPE F F Q VCHT K KD YEE Y G P S ICR 409
Cdd:pfam00022 360 APGNT V ER ---- RY SA W I GGS I LAS LGT F Q Q MWVS K QE YEE H G A S VVE 403
NBD_sugar-kinase_HSP70_actin
cd00012
Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily ...
9-196
9.61e-11
Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure.
Pssm-ID: 212657 [Multi-domain]
Cd Length: 185
Bit Score: 60.68
E-value: 9.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 9 VV D C G TGY TK L G Y A --- G NTE P QF I I P SCIAIR esakvvdqaqrrvlrgvddldffigdeaidkptyatkwpirh G I V E D 85
Cdd:cd00012 2 GI D I G STS TK A G V A dld G EIL P EE I V P TPVGRP ------------------------------------------ G A V T D 39
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 86 W D LM E RFMEQVVFKY LR - AEP E DHYFLM TEP PLNTP ENRE YL --------- AEIMF E SFNVPGLYIAVQ AV L A LA asw TS 155
Cdd:cd00012 40 L D EL E EALRELLKEA LR q LKS E IDAVGI TEP GGVPK ENRE VI ilpnlllip LALAL E DLGGVPVAVVND AV A A AL --- AE 116
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 52345394 156 RQV G ERTL T GI V I D S G D G V T HVIP V AE G YVIGSCIKHIP IA 196
Cdd:cd00012 117 GLF G KEED T VL V V D L G T G T T GIAI V ED G KGGVGAAGELG IA 157
Name
Accession
Description
Interval
E-value
PTZ00280
PTZ00280
Actin-related protein 3; Provisional
2-417
0e+00
Actin-related protein 3; Provisional
Pssm-ID: 240343
Cd Length: 414
Bit Score: 718.44
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 2 A GS LP PC V V D C GTGYTK L GYAGNTEP QF IIP SC IA IRESAKV vdqaq RR VLR G VD DLDF F IGDEA IDKP - T Y ATKW P IR H 80
Cdd:PTZ00280 1 A ST LP VV V I D N GTGYTK M GYAGNTEP TY IIP TL IA DNSKQSR ----- RR SKK G FE DLDF Y IGDEA LAAS k S Y TLTY P MK H 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 81 GIVEDWDLME R F M EQ VV FKYLR A EPE D HYF LM TEPP L N T PENREY L AEIMFE S FNV P GLYIAVQAVLAL A ASWTS RQVG E 160
Cdd:PTZ00280 76 GIVEDWDLME K F W EQ CI FKYLR C EPE E HYF IL TEPP M N P PENREY T AEIMFE T FNV K GLYIAVQAVLAL R ASWTS KKAK E 155
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 161 R -- TLTG I VIDSGDGVTHVIPV AE GYVIGS C IKHIP I AGRDIT Y FIQQ L LRER EVG IP P E QS L ET A KA IKEKYCY IC PDI 238
Cdd:PTZ00280 156 L gg TLTG T VIDSGDGVTHVIPV VD GYVIGS S IKHIP L AGRDIT N FIQQ M LRER GEP IP A E DI L LL A QR IKEKYCY VA PDI 235
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 239 VR EF A KYD V DP RKWI K Q YT GI N AINQ K KFII DVGYERFLGPE I FFHPE FANPDFMESISD VVD EV IQSCPID V RRPLYKN 318
Cdd:PTZ00280 236 AK EF E KYD S DP KNHF K K YT AV N SVTK K PYTV DVGYERFLGPE M FFHPE IFSSEWTTPLPE VVD DA IQSCPID C RRPLYKN 315
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 319 V VLSGGSTMF RD F GR RLQRD LKRV VD A RLK LSQ ELSGG RI KP K P VE V Q VV T H HM QRYAVW F GGSMLAS T PEF FQ VCHTK K 398
Cdd:PTZ00280 316 I VLSGGSTMF KG F DK RLQRD VRKR VD R RLK KAE ELSGG KL KP I P ID V N VV S H PR QRYAVW Y GGSMLAS S PEF EK VCHTK A 395
410
....*....|....*....
gi 52345394 399 D Y E EYGPSICR H N P VF GVM 417
Cdd:PTZ00280 396 E Y D EYGPSICR Y N N VF HSV 414
ACTIN
smart00268
Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
6-412
1.73e-153
Actin; ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Pssm-ID: 214592 [Multi-domain]
Cd Length: 373
Bit Score: 438.62
E-value: 1.73e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 6 P PC V V D C G T G YT K L G Y AG NTE PQ FII PS CIA iresakvvd QAQRRVLRGV D DL D F F I GDEA ID K PTYAT - K W PI RH GIVE 84
Cdd:smart00268 2 P AI V I D N G S G TI K A G F AG EDF PQ VVF PS IVG --------- RPKDGKGMVG D AK D I F V GDEA QE K RGGLE l K Y PI EN GIVE 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 85 D WD L ME RFMEQVV F KY LR A EPE D H YF L M TEPP L N TPE NRE YLA EIMFE S FN V P G LYIA V QAVL A L A AS WTS rqvgertl T 164
Cdd:smart00268 73 N WD D ME KIWDYTF F NE LR V EPE E H PV L L TEPP M N PKS NRE KIL EIMFE T FN F P A LYIA I QAVL S L Y AS GRT -------- T 144
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 165 G I VIDSGDGVTHV I PV AE GYV IGSC IK H I P IAGRDIT YFIQQ LL R ER EVGIPPEQSL E TAKA IKEK Y CY ICP D IVR E FAK 244
Cdd:smart00268 145 G L VIDSGDGVTHV V PV VD GYV LPHA IK R I D IAGRDIT DYLKE LL S ER GYQFNSSAEF E IVRE IKEK L CY VAE D FEK E MKL 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 245 YD vdp RKWIKQYTGINAINQKKFI I D VG Y ERF LG PEI F F H PE FANPDF m ES I SDV V D E V IQ S C P IDVR RP LY K N V VLSGG 324
Cdd:smart00268 225 AR --- ESSESSKLEKTYELPDGNT I K VG N ERF RI PEI L F S PE LIGLEQ - KG I HEL V Y E S IQ K C D IDVR KD LY E N I VLSGG 300
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 325 ST MFRD FG R RL QRD LK RVV darlklsqelsggrik PK PVE V Q V VTHHMQR Y A VW F GGS M LAS TPE F FQVCH TKK D YEE Y G 404
Cdd:smart00268 301 ST LIPG FG E RL EKE LK QLA ---------------- PK KLK V K V IAPPERK Y S VW L GGS I LAS LST F EDMWI TKK E YEE S G 364
....*...
gi 52345394 405 PS I CRHNP 412
Cdd:smart00268 365 SQ I VERKC 372
COG5277
COG5277
Actin-related protein [Cytoskeleton];
1-410
6.17e-105
Actin-related protein [Cytoskeleton];
Pssm-ID: 227602 [Multi-domain]
Cd Length: 444
Bit Score: 317.44
E-value: 6.17e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 1 M A G SLP P CV V - D C G T G Y TK L G Y AGN TE P QFII PS CIAI R ES akvvdqa QRR V LRGVDDL D FFI G D EA --- I D KPTYATKW 76
Cdd:COG5277 1 M T G DNV P TI V i D N G S G T TK A G F AGN DT P TTVF PS IVGR R RD ------- EDS V MEDTEEK D TYV G N EA qnd R D NSLLELRY 73
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 77 PI RH GI VED WD L ME RFMEQVV F K -- Y L RAE PE D H YF L M TEPPLN T P E NRE YLA E IM FE SF NVP G LY I A V QAVL A L A AS WT 154
Cdd:COG5277 74 PI EN GI ILN WD A ME QIWDYTF F N kg D L LPS PE E H PL L L TEPPLN P P S NRE KIT E LL FE TL NVP A LY L A I QAVL S L Y AS GS 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 155 S rqvger TL TG I VIDSGD G VTHVIPV AE G Y V IGSCI K H I P I A GRDIT YFIQQ LLRE REVGIP -------- P E Q S L E TAKA 226
Cdd:COG5277 154 S ------ DE TG L VIDSGD S VTHVIPV VD G I V LPKAV K R I D I G GRDIT DYLKK LLRE KYPPSR gynlksel V E Y S S E IVNE 227
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 227 IKE KY C ------- Y ICP D IVR EF AKYDVD P RKWIKQY T GIN ---- A I NQKKFI ------ I DV G Y E - RF LG PEI F F H PE -- 286
Cdd:COG5277 228 IKE EV C etddesa Y VSL D AEE EF EEEEEK P AEKSTES T FQL sket S I AKESKE lpdgee I EF G N E e RF KA PEI L F K PE lp 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 287 ------------------ FA N PDFMES -------- ISDV V DEV IQ S C PI DVR RP LY K N V VL S GG STMFRD F GR RLQ RD L K 340
Cdd:COG5277 308 isgleeagkideskqelv AE N YEISPT nlgndiag LPEL V YQS IQ I C DE DVR KS LY S N I VL T GG TSKIPG F AE RLQ KE L T 387
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 341 rvvdarlklsqelsgg RIK P KPVE V Q V VTHHMQRYAV W F G G S M LAS TPE F F Q VCH TK KD YEE Y GP S I CRH 410
Cdd:COG5277 388 ---------------- SLA P SIWK V S V IPPPDPSLDA W L G A S I LAS LET F Q Q LWI TK EE YEE H GP D I LQE 441
Actin
pfam00022
Actin;
6-409
7.06e-97
Actin;
Pssm-ID: 394979 [Multi-domain]
Cd Length: 407
Bit Score: 295.75
E-value: 7.06e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 6 PPC V V D C G TGY T KL G Y AG NTE P QFI IPSC IAIRESA KV VD qaqrrvlrgvd DLDFFI GDEA IDK - P TYATKW P IRH GIV E 84
Cdd:pfam00022 2 SAL V I D N G SHT T RA G F AG EDA P KAV IPSC VGKPRGT KV EA ----------- ANKYYV GDEA LTY r P GMEVRS P VED GIV V 70
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 85 DWD L ME RFM E Q V VFKY L RAE PE D H YF L M TEPP L N T P E NRE YL AEIMFE S F N VP G LY I avqavl A LAASWTSRQV G e RT l T 164
Cdd:pfam00022 71 DWD A ME EIW E H V LKEE L QVD PE E H PL L L TEPP W N P P A NRE KA AEIMFE K F G VP A LY L ------ A KNPVLSAFAS G - RT - T 142
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 165 G I V I DSG D GVT H V I PV AE GYV IGSC I KHIPIA G RDI T YFIQQ LLR E R EVG I P P EQSLETA K A ------------------ 226
Cdd:pfam00022 143 G L V V DSG A GVT S V V PV HD GYV LQKA I RRSDLG G DFL T DYLRE LLR S R NIE I T P RYLIKSK K P gdpapavtkrelpdttys 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 227 ------------ IKE KY CY ICP D IVREFAKY dvdprkwikqytgi NA I NQKKFI ------ I DV G Y ERF LG PEI F F H P EFA 288
Cdd:pfam00022 223 yktyqerrvlee IKE SV CY VSD D PFGDETTS -------------- SS I PTRVYE lpdgst I IL G A ERF RV PEI L F N P SLI 288
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 289 NPD ------- FMES I SDVVDEV I QS C PI D V R RP L YK N V V LS GG STM F RD F GR RL QRD L KRVV darlklsqe LS G GRI K PK 361
Cdd:pfam00022 289 GSE selpppq TAVG I PELIVDA I NA C DV D L R PS L LA N I V VT GG NSL F PG F TE RL EKE L AQLA --------- PP G VKV K II 359
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 52345394 362 PVEVQ V VT hhmq RY AV W F GGS M LAS TPE F F Q VCHT K KD YEE Y G P S ICR 409
Cdd:pfam00022 360 APGNT V ER ---- RY SA W I GGS I LAS LGT F Q Q MWVS K QE YEE H G A S VVE 403
PTZ00004
PTZ00004
actin-2; Provisional
9-407
7.35e-90
actin-2; Provisional
Pssm-ID: 240225
Cd Length: 378
Bit Score: 276.65
E-value: 7.35e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 9 VVD C G T G YT K L G Y AG NTE P QFII PS C iairesak V VDQAQRRVLR G VDDL D FFI GDEA I DK - PTYAT K W PI R HGIV ED WD 87
Cdd:PTZ00004 10 VVD N G S G MV K A G F AG DDA P RCVF PS I -------- V GRPKNPGIMV G MEEK D CYV GDEA Q DK r GILTL K Y PI E HGIV TN WD 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 88 L ME RFMEQVVFKY LR AE PE D H YF L M TE P PLN TPE NRE YLAE IMFE SF NVP GL Y I A V QAVL A L A AS wtsrqvg E RT l TGIV 167
Cdd:PTZ00004 82 D ME KIWHHTFYNE LR VA PE E H PV L L TE A PLN PKA NRE KMTQ IMFE TH NVP AM Y V A I QAVL S L Y AS ------- G RT - TGIV 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 168 I DSGDGV T H VI P VA EGY VIGSC I KHIPI AGRD I T YFIQQL L R ER EVGIPPEQSL E TAKA IKEK Y CYI CP D ivrefak Y D V 247
Cdd:PTZ00004 154 L DSGDGV S H TV P IY EGY SLPHA I HRLDV AGRD L T EYMMKI L H ER GTTFTTTAEK E IVRD IKEK L CYI AL D ------- F D E 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 248 DP rkwi KQYT G INAINQKKF ------ II D VG Y ERF LG PE IF F H P EFANPDFMES I SDVVDEV I QS C P ID V R RP LY K N V VL 321
Cdd:PTZ00004 227 EM ---- GNSA G SSDKYEESY elpdgt II T VG S ERF RC PE AL F Q P SLIGKEEPPG I HELTFQS I NK C D ID I R KD LY G N I VL 302
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 322 SGG S TM F R DFGR RL QRD L KRVV darlklsqelsggrik P KPVEVQ VV THHMQR Y A VW F GGS M L A S T P E F F Q VCH TK KD Y E 401
Cdd:PTZ00004 303 SGG T TM Y R GLPE RL TKE L TTLA ---------------- P STMKIK VV APPERK Y S VW I GGS I L S S L P T F Q Q MWV TK EE Y D 366
....*.
gi 52345394 402 E Y GPSI 407
Cdd:PTZ00004 367 E S GPSI 372
PTZ00281
PTZ00281
actin; Provisional
9-407
1.82e-77
actin; Provisional
Pssm-ID: 173506
Cd Length: 376
Bit Score: 244.99
E-value: 1.82e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 9 V V D C G T G YT K L G Y AG NTE P QFII PS CIA - I R ESAKV V DQA Q R rvlrgvddl D FFI GDEA ID K PTYA T - K W PI R HGIV ED W 86
Cdd:PTZ00281 10 V I D N G S G MC K A G F AG DDA P RAVF PS IVG r P R HTGVM V GMG Q K --------- D SYV GDEA QS K RGIL T l K Y PI E HGIV TN W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 87 D L ME RFMEQVVFKY LR AE PE D H YF L M TE P PLN TPE NRE YLAE IMFE S FN V P GL Y I A V QAVL A L A AS wtsrqvg E RT l TGI 166
Cdd:PTZ00281 81 D D ME KIWHHTFYNE LR VA PE E H PV L L TE A PLN PKA NRE KMTQ IMFE T FN T P AM Y V A I QAVL S L Y AS ------- G RT - TGI 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 167 V I DSGDGV T H VI P VA EGY VIGSC I KHIPI AGRD I T YFIQQL L R ER EVGIPPEQSL E TAKA IKEK YC Y ICP D IVR E F akyd 246
Cdd:PTZ00281 153 V M DSGDGV S H TV P IY EGY ALPHA I LRLDL AGRD L T DYMMKI L T ER GYSFTTTAER E IVRD IKEK LA Y VAL D FEA E M ---- 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 247 vdprkwik Q YTGINAINQ K KF ------ I I DV G Y ERF LG PE IF F H P E F AN pdf MES -- I SDVVDEV I QS C PI D V R RP LY K N 318
Cdd:PTZ00281 229 -------- Q TAASSSALE K SY elpdgq V I TI G N ERF RC PE AL F Q P S F LG --- MES ag I HETTYNS I MK C DV D I R KD LY G N 297
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 319 VVLSGG S TMF RDFGR R LQRD L K rvvdarlklsqelsgg RIK P KPVEVQVVTHHMQR Y A VW F GGS M LAS TPE F F Q VCHT K K 398
Cdd:PTZ00281 298 VVLSGG T TMF PGIAD R MNKE L T ---------------- ALA P STMKIKIIAPPERK Y S VW I GGS I LAS LST F Q Q MWIS K E 361
....*....
gi 52345394 399 D Y E E Y GPSI 407
Cdd:PTZ00281 362 E Y D E S GPSI 370
PTZ00466
PTZ00466
actin-like protein; Provisional
7-407
1.60e-75
actin-like protein; Provisional
Pssm-ID: 240426
Cd Length: 380
Bit Score: 239.85
E-value: 1.60e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 7 P CVV D C GTGY T K L G Y AG NTE P QFII PS CIA i R ESA K vvdqaqr RV LR G VDDLDF F I G DE A ----- ID K P TY atkw PI R HG 81
Cdd:PTZ00466 14 P III D N GTGY I K A G F AG EDV P NLVF PS YVG - R PKY K ------- RV MA G AVEGNI F V G NK A eeyrg LL K V TY ---- PI N HG 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 82 I V E D W DL ME RFMEQ V v FKYLRAEP E D H YF L M TE P PLN TPE N R E YL AE IM FE S FNVP G L Y I AV QA V L A L AASWTS rqvger 161
Cdd:PTZ00466 82 I I E N W ND ME NIWIH V - YNSMKINS E E H PV L L TE A PLN PQK N K E KI AE VF FE T FNVP A L F I SI QA I L S L YSCGKT ------ 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 162 tl T G I V I D S GDGV T H VIPVA EGY V I GSC I KHIPI AGRDIT YFIQQ LLR EREVGIPPEQSL E TA K AI KE KY CY ICPDIVR E 241
Cdd:PTZ00466 155 -- N G T V L D C GDGV C H CVSIY EGY S I TNT I TRTDV AGRDIT TYLGY LLR KNGHLFNTSAEM E VV K NM KE NC CY VSFNMNK E 232
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 242 FAKYD vdprkwi K QY T GINA I NQKKFI I DV G Y ER FLG PE IF F H P EFANPDFM e SI S DVVDEV I QSCPI D V RR P LY KNV VL 321
Cdd:PTZ00466 233 KNSSE ------- K AL T TLPY I LPDGSQ I LI G S ER YRA PE VL F N P SILGLEYL - GL S ELIVTS I TRADM D L RR T LY SHI VL 304
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 322 SGG S TMF RD FG R RL QRDLK rvvdarlklsqelsgg RIK PK PVEVQVVTHHMQRYAVWF GGS M LAS TPE F FQVCHT K KDYE 401
Cdd:PTZ00466 305 SGG T TMF HG FG D RL LNEIR ---------------- KFA PK DITIRISAPPERKFSTFI GGS I LAS LAT F KKIWIS K QEFD 368
....*.
gi 52345394 402 EYG PS I 407
Cdd:PTZ00466 369 EYG SV I 374
PTZ00452
PTZ00452
actin; Provisional
1-407
2.60e-57
actin; Provisional
Pssm-ID: 185631
Cd Length: 375
Bit Score: 192.66
E-value: 2.60e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 1 M AGSL P PC V V D C G T GY T K L G Y AG NTE P QFII P SCIA iresakvv DQA Q RRVLRGVDDLDFFI G D EA - IDKPTY A T K W PI R 79
Cdd:PTZ00452 1 M QAQY P AV V I D N G S GY C K I G I AG DDA P TSCF P AIVG -------- RSK Q NDGIFSTFNKEYYV G E EA q AKRGVL A I K E PI Q 72
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 80 H GI VED WD LM E RFMEQVVFKY L RAE PED HYFL MT EP P L N TPE NRE YLAE IMFE S FN V P G LYI AVQ AVL A L AA S WTS rqvg 159
Cdd:PTZ00452 73 N GI INS WD DI E IIWHHAFYNE L CMS PED QPVF MT DA P M N SKF NRE RMTQ IMFE T FN T P C LYI SNE AVL S L YT S GKT ---- 148
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 160 ertl T G I V I DSG D GVTH VI PV A EG YV I GSC I KH I PI AGR DI T YFIQ Q L L R E REVGIPPEQSLETA K A IKE KY CY IC pdiv 239
Cdd:PTZ00452 149 ---- I G L V V DSG E GVTH CV PV F EG HQ I PQA I TK I NL AGR LC T DYLT Q I L Q E LGYSLTEPHQRIIV K N IKE RL CY TA ---- 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 240 refakyd V DP RKWIKQ Y TGI N AINQ ----- KKF I IDVGYER F LGP EI F F H P EFANPD f MES I SDVVDEV I QS C PI D V R RP 314
Cdd:PTZ00452 221 ------- L DP QDEKRI Y KES N SQDS pyklp DGN I LTIKSQK F RCS EI L F Q P KLIGLE - VAG I HHLAYSS I KK C DL D L R QE 292
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 315 L YK N V VLSGG S T M F RDFGR RL QRD L KRV V DAR LK lsqelsggrikpkpve V QV VTHHMQ R YAV W F GGS MLAS ---- T P EF 390
Cdd:PTZ00452 293 L CR N I VLSGG T T L F PGIAN RL SNE L TNL V PSQ LK ---------------- I QV AAPPDR R FSA W I GGS IQCT lstq Q P QW 356
410
....*....|....*..
gi 52345394 391 FQ vcht KKD Y E E Y GPSI 407
Cdd:PTZ00452 357 IK ---- RQE Y D E Q GPSI 369
NBD_sugar-kinase_HSP70_actin
cd00012
Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily ...
9-196
9.61e-11
Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily; This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure.
Pssm-ID: 212657 [Multi-domain]
Cd Length: 185
Bit Score: 60.68
E-value: 9.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 9 VV D C G TGY TK L G Y A --- G NTE P QF I I P SCIAIR esakvvdqaqrrvlrgvddldffigdeaidkptyatkwpirh G I V E D 85
Cdd:cd00012 2 GI D I G STS TK A G V A dld G EIL P EE I V P TPVGRP ------------------------------------------ G A V T D 39
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52345394 86 W D LM E RFMEQVVFKY LR - AEP E DHYFLM TEP PLNTP ENRE YL --------- AEIMF E SFNVPGLYIAVQ AV L A LA asw TS 155
Cdd:cd00012 40 L D EL E EALRELLKEA LR q LKS E IDAVGI TEP GGVPK ENRE VI ilpnlllip LALAL E DLGGVPVAVVND AV A A AL --- AE 116
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 52345394 156 RQV G ERTL T GI V I D S G D G V T HVIP V AE G YVIGSCIKHIP IA 196
Cdd:cd00012 117 GLF G KEED T VL V V D L G T G T T GIAI V ED G KGGVGAAGELG IA 157
FtsA
COG0849
Cell division ATPase FtsA [Cell cycle control, cell division, chromosome partitioning];
160-231
9.15e-03
Cell division ATPase FtsA [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 223918 [Multi-domain]
Cd Length: 418
Bit Score: 37.98
E-value: 9.15e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 52345394 160 E RT L TGIV ID S G D G V T HVIPVAE G YVIG sc IKH IP IA G RDI T YF I QQL L R erevgippe QSL E T A KA IK E KY 231
Cdd:COG0849 200 E KE L GVAL ID I G G G T T DIAIYKN G ALRY -- TGV IP VG G DHV T KD I AKG L K --------- TPF E E A ER IK I KY 260
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.20
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01