|
Name |
Accession |
Description |
Interval |
E-value |
| Tryp_SPc |
smart00020 |
Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens ... |
306-535 |
1.60e-99 |
|
Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. A few, however, are active as single chain molecules, and others are inactive due to substitutions of the catalytic triad residues.
Pssm-ID: 214473 [Multi-domain] Cd Length: 229 Bit Score: 300.36 E-value: 1.60e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 306 RIVGGALTSESKWPWQVSLHF-GTTHICGGTLIDAQWVLTAAHCFfvtREKLLEGWKVYAGTSNLHQLPEA--ASISQII 382
Cdd:smart00020 1 RIVGGSEANIGSFPWQVSLQYgGGRHFCGGSLISPRWVLTAAHCV---RGSDPSNIRVRLGSHDLSSGEEGqvIKVSKVI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 383 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDEKTSPFLREVQVNLIDFKKCN 462
Cdd:smart00020 78 IHPNYNPSTYDNDIALLKLKEPVTLSDNVRPICLPSSNYNVPAGTTCTVSGWGRTSEGAGSLPDTLQEVNVPIVSNATCR 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 463 DYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCeQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 535
Cdd:smart00020 158 RAYSGGGAITDNMLCAGGLEGGKDACQGDSGGPLVC-NDGRWVLVGIVSWGSGCARPGKPGVYTRVSSYLDWI 229
|
|
| Tryp_SPc |
cd00190 |
Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens ... |
307-535 |
4.43e-97 |
|
Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.
Pssm-ID: 238113 [Multi-domain] Cd Length: 232 Bit Score: 294.18 E-value: 4.43e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 307 IVGGALTSESKWPWQVSLHFGT-THICGGTLIDAQWVLTAAHCFfvtREKLLEGWKVYAGTSNLHQLPE---AASISQII 382
Cdd:cd00190 1 IVGGSEAKIGSFPWQVSLQYTGgRHFCGGSLISPRWVLTAAHCV---YSSAPSNYTVRLGSHDLSSNEGggqVIKVKKVI 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 383 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDeKTSPFLREVQVNLIDFKKCN 462
Cdd:cd00190 78 VHPNYNPSTYDNDIALLKLKRPVTLSDNVRPICLPSSGYNLPAGTTCTVSGWGRTSEGG-PLPDVLQEVNVPIVSNAECK 156
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 463 DYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 535
Cdd:cd00190 157 RAYSYGGTITDNMLCAGGLEGGKDACQGDSGGPLVCNDNGRGVLVGIVSWGSGCARPNYPGVYTRVSSYLDWI 229
|
|
| Trypsin |
pfam00089 |
Trypsin; |
307-535 |
5.11e-70 |
|
Trypsin;
Pssm-ID: 395042 [Multi-domain] Cd Length: 219 Bit Score: 223.86 E-value: 5.11e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 307 IVGGALTSESKWPWQVSLHFGT-THICGGTLIDAQWVLTAAHCFfvtreKLLEGWKVYAGTSNLHQLPEA---ASISQII 382
Cdd:pfam00089 1 IVGGDEAQPGSFPWQVSLQLSSgKHFCGGSLISENWVLTAAHCV-----SGASDVKVVLGAHNIVLREGGeqkFDVEKII 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 383 INGNYTDEQDDYDIALIRLSKPLTLSAHIHPACLPMHGQTFGLNETCWITGFGKTKETDEKTSpfLREVQVNLIDFKKCN 462
Cdd:pfam00089 76 VHPNYNPDTLDNDIALLKLESPVTLGDTVRPICLPDASSDLPVGTTCTVSGWGNTKTLGPSDT--LQEVTVPVVSRETCR 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 463 DYlvYDSYLTPRMMCAGDlrGGRDSCQGDSGGPLVCEQNnrwYLAGVTSWGTGCGQKNKPGVYTKVTEVLPWI 535
Cdd:pfam00089 154 SA--YGGTVTDTMICAGA--GGKDACQGDSGGPLVCSDG---ELIGIVSWGYGCASGNYPGVYTPVSSYLDWI 219
|
|
| SRCR_2 |
pfam15494 |
Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain ... |
212-302 |
4.82e-30 |
|
Scavenger receptor cysteine-rich domain; SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.
Pssm-ID: 434754 Cd Length: 99 Bit Score: 113.19 E-value: 4.82e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 212 WDKSLLKVYSGSSGEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAHRDITSSF-------LLSEYNTTIQESLY-RS 283
Cdd:pfam15494 1 GPNFLLQVYSSARPSWLPVCSDDWNPAYGRQACQQLGYLRLTYHKSVNLSDISGNSsqefmklNSSSLNTDLYEALQpRD 80
|
90
....*....|....*....
gi 111185930 284 QCPSRRYVSLQCSHCGLRA 302
Cdd:pfam15494 81 SCSSGSVVSLRCSECGLRS 99
|
|
| COG5640 |
COG5640 |
Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, ... |
304-541 |
3.56e-26 |
|
Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 227927 [Multi-domain] Cd Length: 413 Bit Score: 110.74 E-value: 3.56e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 304 TGRIVGGALTSESKWPWQVSLhfgTTHI--------CGGTLIDAQWVLTAAHCFfvtrekllEGWKVYAGTSNLhQLPEA 375
Cdd:COG5640 30 SSRIIGGSNANAGEYPSLVAL---VDRIsdyvsgtfCGGSKLGGRYVLTAAHCA--------DASSPISSDVNR-VVVDL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 376 ASISQ--------IIINGNYTDEQDDYDIALIRLSKPLTLSAH-IHPACLPmhgQTFGLNETCW----ITGFGKTKETD- 441
Cdd:COG5640 98 NDSSQaerghvrtIYVHEFYSPGNLGNDIAVLELARAASLPRVkITSFDAS---DTFLNSVTTVspmtNGTFGVTTPSDv 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 442 EKTSP---FLREVQVNLIDFKKCNDYLVY----DSYLTPRMMCAGdlRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGT 514
Cdd:COG5640 175 PRSSPkgtILHEVAVLFVPLSTCAQYKGCanasDGATGLTGFCAG--RPPKDACQGDSGGPIFHKGEEGRVQRGVVSWGD 252
|
250 260
....*....|....*....|....*...
gi 111185930 515 G-CGQKNKPGVYTKVTEVLPWIYRKMES 541
Cdd:COG5640 253 GgCGGTLIPGVYTNVSNYQDWIAAMTNG 280
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
6-122 |
1.88e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 70.10 E-value: 1.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 6 HRNSSPARTPPQAS-PARTSPARA-PPQASPAR-TPPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPsrss 81
Cdd:PHA03378 671 HIPYQPSPTGANTMlPIQWAPGTMqPPPRAPTPmRPPAAPPGRAqRPAAATGRARPPAAAPGRARPPAAAPGRARP---- 746
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 111185930 82 sgrsssarsasTTSSPTRVYLVRATPVGAVPIRASPARSAP 122
Cdd:PHA03378 747 -----------PAAAPGRARPPAAAPGRARPPAAAPGAPTP 776
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
11-131 |
5.25e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 68.56 E-value: 5.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 11 PARTPPQASPARTSPARAPPQASPART----PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPSRSSSGRS 85
Cdd:PHA03378 655 PQVEITPYKPTWTQIGHIPYQPSPTGAntmlPIQWAPGTMqPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRA 734
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 111185930 86 SSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03378 735 RPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPP 780
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-136 |
6.74e-12 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 68.56 E-value: 6.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARA-PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPsrSSSG 83
Cdd:PHA03378 693 TMQPPPRAPTPMRPPAAPPGRAqRPAAATGRArPPAAAPGRArPPAAAPGRARPPAAAPGRARPPAAAPGRARP--PAAA 770
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASParsAPATRATRESPGLSFP 136
Cdd:PHA03378 771 PGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGP---TSMQLMPRAAPGQQGP 820
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
9-131 |
2.02e-11 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 67.01 E-value: 2.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARaPPQASPART-PPQASPTR-TPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSS 86
Cdd:PHA03378 667 TQIGHIPYQPSPTGANTML-PIQWAPGTMqPPPRAPTPmRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRAR 745
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 111185930 87 SARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03378 746 PPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRP 790
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-129 |
2.78e-11 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 66.24 E-value: 2.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARtPPQASPARTSPARA------PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARASLARAPPS 78
Cdd:PHA03378 699 RAPTPMR-PPAAPPGRAQRPAAatgrarPPAAAPGRArPPAAAPGRArPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQ 777
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 111185930 79 RSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPiRASPARSAPATRATRE 129
Cdd:PHA03378 778 PPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMP-RAAPGQQGPTKQILRQ 827
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
4-131 |
5.02e-11 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 65.28 E-value: 5.02e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASParAPPPQASPARASPARASLARAppsrssSG 83
Cdd:PRK12323 367 QSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAA--ARAVAAAPARRSPAPEALAAA------RQ 438
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 111185930 84 RSSSARSASTTSSPTRVylvrATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK12323 439 ASARGPGGAPAPAPAPA----AAPAAAARPAAAGPRPVAAAAAAAPAR 482
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
12-136 |
3.54e-10 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 62.78 E-value: 3.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 12 ARTPPQASPARTSPARA------PPQASPART-PPQASPTRT-PPQASPARAPPPQASPARASPARAslARAPPSRSSSG 83
Cdd:PHA03378 713 RAQRPAAATGRARPPAAapgrarPPAAAPGRArPPAAAPGRArPPAAAPGRARPPAAAPGAPTPQPP--PQAPPAPQQRP 790
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03378 791 RGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGRPSLKKP 843
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
3-147 |
3.60e-10 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 62.42 E-value: 3.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARAPPqasPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPV---AQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA 443
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA-TRATRESPGLsfpkfSWQETQRQL 147
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAaARLTPTEEGD-----VWHATVQQL 504
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
3-151 |
6.41e-10 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 61.82 E-value: 6.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTrTPPQASPARAPPPQAS---------PARASPARASLA 73
Cdd:PRK12323 437 RQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAA-APARAAPAAAPAPADDdpppweelpPEFASPAPAQPD 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 74 RAPPSRSSSGRSSSARSASTTSSPTRVylVRATPVGAVPIRASPARSAPATRATRESPGLSfPKF--SWQETQRQLPLIG 151
Cdd:PRK12323 516 AAPAGWVAESIPDPATADPDDAFETLA--PAPAAAPAPRAAAATEPVVAPRPPRASASGLP-DMFdgDWPALAARLPVRG 592
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
9-148 |
7.98e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 58.80 E-value: 7.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQA----SPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGR 84
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAvaslSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 85 SSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP---GLSFPKFSWQETQRQLP 148
Cdd:PHA03247 2835 QPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPpvrRLARPAVSRSTESFALP 2901
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
7-132 |
1.55e-08 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 57.38 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARA-PPQASPART-PPQASPTRT-PPQASPARA---PPPQASPA-----RASPARASLARA 75
Cdd:PHA03378 723 RARPPAAAPGRARPPAAAPGRArPPAAAPGRArPPAAAPGRArPPAAAPGAPtpqPPPQAPPApqqrpRGAPTPQPPPQA 802
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 76 PPSRSSSGRSSSARSASTTSSPTRVYLVRATPVG--AVPIRASPARSAPAtrATRESPG 132
Cdd:PHA03378 803 GPTSMQLMPRAAPGQQGPTKQILRQLLTGGVKRGrpSLKKPAALERQAAA--GPTPSPG 859
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
4-130 |
6.86e-08 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 55.38 E-value: 6.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PRK07764 389 GGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAP 468
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 111185930 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRES 130
Cdd:PRK07764 469 APAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRER 515
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
5-124 |
8.38e-08 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 55.33 E-value: 8.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 5 SHRNSSPART-PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PHA03247 2727 AARQASPALPaAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPAD 2806
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 111185930 84 RSSSARSASTTSSPTrvylvrATPVGAVPIRASPARSAPAT 124
Cdd:PHA03247 2807 PPAAVLAPAAALPPA------ASPAGPLPPPTSAQPTAPPP 2841
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
3-123 |
1.05e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.61 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASptRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PRK07764 384 RLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAP--APAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAA 461
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 111185930 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA 123
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
10-77 |
1.36e-07 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 53.33 E-value: 1.36e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 10 SP-ARTPPQASPARTSPARAPPQASPARTPPQASPTrTPPQASPArAPPPQASPARASPARA---SLARAPP 77
Cdd:PHA02682 80 SPlAPSPACAAPAPACPACAPAAPAPAVTCPAPAPA-CPPATAPT-CPPPAVCPAPARPAPAcppSTRQCPP 149
|
|
| SR |
smart00202 |
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR ... |
224-297 |
1.52e-07 |
|
Scavenger receptor Cys-rich; The sea urchin egg peptide speract contains 4 repeats of SR domains that contain 6 conserved cysteines. May bind bacterial antigens in the protein MARCO.
Pssm-ID: 214555 [Multi-domain] Cd Length: 101 Bit Score: 49.65 E-value: 1.52e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 224 SGEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAH-RDITSSFLLSEYNTTIQE-SLyrSQCPSRRYVSLQCSH 297
Cdd:smart00202 19 NGQWGTVCDDGWDLRDANVVCRQLGFGGAVSASGSAYfGPGSGPIWLDNVRCSGTEaSL--SDCPHSGWGSHNCSH 92
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
7-124 |
3.12e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.45 E-value: 3.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQ-ASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRS 85
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAApAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAP 462
|
90 100 110
....*....|....*....|....*....|....*....
gi 111185930 86 SSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPAT 124
Cdd:PRK07764 463 SAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPA 501
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
8-77 |
3.76e-07 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 3.76e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
11-136 |
3.78e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 52.93 E-value: 3.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 11 PARTPP-QASPARTSPARAP-PQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07003 427 PAAPAPpATADRGDDAADGDaPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAA 506
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 111185930 89 RSASttssptrvylvrATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 507 VPDA------------RAPAAASREDAPAAAAPPAPEARPPTPAAAAP 542
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
11-77 |
3.95e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 52.86 E-value: 3.95e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK14971 393 SAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQAVRPAQFKEEKKIP 459
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
12-131 |
4.14e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 4.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 12 ARTPPQASPAR--TSPARAPPQASPARTP-PQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PHA03247 2655 DPAPGRVSRPRraRRLGRAAQASSPPQRPrRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPA 2734
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 111185930 89 RSASTTSSPTRVylVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PHA03247 2735 LPAAPAPPAVPA--GPATPGGPARPARPPTTAGPPAPAPPAAP 2775
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
29-136 |
6.16e-07 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.02 E-value: 6.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 29 PPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSSPTRVylVRATPV 108
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAA--PAAAPA 443
|
90 100 110
....*....|....*....|....*....|
gi 111185930 109 GAVPIRASPARSAPATRAT--RESPGLSFP 136
Cdd:PRK14951 444 AVALAPAPPAQAAPETVAIpvRVAPEPAVA 473
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
4-140 |
9.08e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.25 E-value: 9.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSP-----ARAPPQASP---ARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPpvrrlARPAVSRSTesfALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 76 PPSRSSSGRSSSARSASTTSS--------PTRVYLVRATPVGAVPIRASPARSAPaTRATRESPGLSfpkfSW 140
Cdd:PHA03247 2940 QPPLAPTTDPAGAGEPSGAVPqpwlgalvPGRVAVPRFRVPQPAPSREAPASSTP-PLTGHSLSRVS----SW 3007
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
16-77 |
1.63e-06 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 51.04 E-value: 1.63e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 16 PQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAP 99
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
4-131 |
2.22e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 2.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSPAraPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PRK07764 654 PKHVAVPDASDGGDGWPAKAGGA--APAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 111185930 84 RSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 732 SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779
|
|
| SRCR |
pfam00530 |
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular ... |
225-297 |
2.32e-06 |
|
Scavenger receptor cysteine-rich domain; These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.
Pssm-ID: 425734 [Multi-domain] Cd Length: 97 Bit Score: 46.19 E-value: 2.32e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 225 GEWLPVCSSSWNDTDSKRTCQQLGFDSAYRTTEVAHRDITSS--FLLSEYNTTIQE-SLyrSQCPSRRYVSLQCSH 297
Cdd:pfam00530 15 GSWGTVCDDGWDLRDANVVCRQLGCGGAVSASSGASFFGPGTgpIWLDDVRCSGNEtSL--WQCPHRPWGNHNCSH 88
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
17-131 |
2.40e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 17 QASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSS 96
Cdd:PRK07764 386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQ 465
|
90 100 110
....*....|....*....|....*....|....*
gi 111185930 97 PTrvylvrATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 466 PA------PAPAAAPEPTAAPAPAPPAAPAPAAAP 494
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
10-77 |
3.75e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 49.74 E-value: 3.75e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 10 SPARTPPQASPARTSPARAPPQASpARTPPQASPTRtPPQASPARAPPPqaSPARASPARASLARAPP 77
Cdd:PRK14965 381 APAPPSAAWGAPTPAAPAAPPPAA-APPVPPAAPAR-PAAARPAPAPAP--PAAAAPPARSADPAAAA 444
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
12-136 |
5.68e-06 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.08 E-value: 5.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 12 ARTPPQASPARTSPARAPPqASPArtPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSsgrsssarsa 91
Cdd:PRK07003 409 ALAPKAAAAAAATRAEAPP-AAPA--PPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSG---------- 475
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 111185930 92 sttssptrvylVRATPVGAVPiraSPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 476 -----------SASAPASDAP---PDAAFEPAPRAAAPSAATPAA 506
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
3-136 |
6.25e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPARTP-PQASPARTSPARAPPQASP----ARTPPQ-ASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PHA03247 2662 SRPRRARRLGRAAqASSPPQRPRRRAARPTVGSltslADPPPPpPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 111185930 77 PSRSSSGRS----SSARSASTTSSPTRVYLVRAtPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2742 PAVPAGPATpggpARPARPPTTAGPPAPAPPAA-PAAGPPRRLTRPAVASLSESRESLPSPWDP 2804
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
8-148 |
8.20e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 48.65 E-value: 8.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 8 NSSPARTPPQASPARTSPARapPQASPArTPPQASPTRTPPQASPARAPPPQASPArASPARASLARAPPSRSSSGRSss 87
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVR--PTPAPS-TRPKAAAAANIPPKEPVRETATPPPVP-PRPVAPPVPHTPESAPKLTRA-- 434
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 88 arsasttssptrvylvrATPVGAVPIRASPARSAPATRATRESPG-LSFPKFSWQETQRQLP 148
Cdd:PRK14950 435 -----------------AIPVDEKPKYTPPAPPKEEEKALIADGDvLEQLEAIWKQILRDVP 479
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
7-77 |
9.06e-06 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 47.55 E-value: 9.06e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 7 RNSSPARTPPQASPARTSPARAPPqasparTPPQASPTRTPPQASPARAPPPQASParasPARASLARAPP 77
Cdd:PHA02682 92 APACPACAPAAPAPAVTCPAPAPA------CPPATAPTCPPPAVCPAPARPAPACP----PSTRQCPPAPP 152
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2-77 |
9.09e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 9.09e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPpqASPARTPPQASPTRTPPQASPARAP-PPQASPAR--ASPARASLARAPP 77
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSP--SPAANEPDPHPPPTVPPPERPRDDPaPGRVSRPRraRRLGRAAQASSPP 2680
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
4-131 |
1.01e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 48.31 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSPARAppQASPARTPPQASPTR--TPPQASPARAPPPQASPARASPARASLARAPPSRSS 81
Cdd:PRK07003 369 GGGVPARVAGAVPAPGARAAAAVGA--SAVPAVTAVTGAAGAalAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGD 446
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 111185930 82 SGRSSSARSASTTssPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07003 447 APVPAKANARASA--DSRCDERDAQPPADSGSASAPASDAPPDAAFEPAP 494
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
1-132 |
1.06e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 1 MDRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASP-TRTPPQASPARAPPPQASPARASPARASLARAPPSR 79
Cdd:PRK07764 663 SDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPaATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLP 742
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 80 SSSGRSSSARSASTTSSPTRVyLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PRK07764 743 PEPDDPPDPAGAPAQPPPPPA-PAPAAAPAAAPPPSPPSEEEEMAEDDAPSMD 794
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
11-132 |
1.81e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.01 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 11 PARTPPQASPARTSPARAPPQASP--------AR-----TPPQASPTRTP------PQASPARAPPPQASPARASPARAS 71
Cdd:PHA03247 2552 PPPLPPAAPPAAPDRSVPPPRPAPrpsepavtSRarrpdAPPQSARPRAPvddrgdPRGPAPPSPLPPDTHAPDPPPPSP 2631
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 72 LARA-PPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PHA03247 2632 SPAAnEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVG 2693
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
9-77 |
2.29e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 47.17 E-value: 2.29e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 9 SSPARTPPQASPARTSPARAP---PQASPARTPPQASPTRTPPQASPARAPPPQASPA---RASPARASLARAPP 77
Cdd:PRK07994 387 PTAAVAPPQAPAVPPPPASAPqqaPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAaasRARPVNSALERLAS 461
|
|
| SPATA3 |
pfam15662 |
Spermatogenesis-associated protein 3 family; The SPATA3 family of proteins is expressed ... |
8-77 |
2.61e-05 |
|
Spermatogenesis-associated protein 3 family; The SPATA3 family of proteins is expressed significantly in testis and faintly in epididymis in the ten tissues of testis, ovary, spleen, kidney, lung, heart, brain, epididymis, liver and skeletal muscle in mouse. Members are not expressed in the eight other tissues. This suggests that SPATA3 plays potential roles in spermatogenesis cell apoptosis or spermatogenesis.
Pssm-ID: 434837 [Multi-domain] Cd Length: 190 Bit Score: 44.96 E-value: 2.61e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPArTPPQASPTRTPPQASPARAPPPQASPARAS--PARASLARAPP 77
Cdd:pfam15662 25 ESTPQQPSSESAPQQPSPESTPQQPSPS-TTPQPSSESTPQQPASQALPAPEIRHSSRCllPPDPNTKAAPP 95
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
9-99 |
3.38e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.86 E-value: 3.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASP-ARTP------------PQASPTRTPPQAsPARAPPPQASPARASPARASLARA 75
Cdd:PHA03247 369 SAGRHHPKRASLPTRKRRSARHAATPfARGPggddqtrpaapvPASVPTPAPTPV-PASAPPPPATPLPSAEPGSDDGPA 447
|
90 100
....*....|....*....|....
gi 111185930 76 PPSRSSSGRSSSARSASTTSSPTR 99
Cdd:PHA03247 448 PPPERQPPAPATEPAPDDPDDATR 471
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
10-62 |
4.02e-05 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 45.60 E-value: 4.02e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 10 SPARTPPQASPARTSPArAPPQASPARTPPQASPTRTPPQASPARAP----PPQASP 62
Cdd:PLN02983 148 APVVMMQPPPPHAMPPA-SPPAAQPAPSAPASSPPPTPASPPPAKAPksshPPLKSP 203
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
2-77 |
4.58e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 4.58e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPAR--APPQASPARTPPQASPTRTPPQASPARAPP-PQASPARASPARASLARAPP 77
Cdd:PRK14951 400 APAPAAAPAAAASAPAAPPAAAPPAPvaAPAAAAPAAAPAAAPAAVALAPAPPAQAAPeTVAIPVRVAPEPAVASAAPA 478
|
|
| flhF |
PRK06995 |
flagellar biosynthesis protein FlhF; |
8-148 |
5.16e-05 |
|
flagellar biosynthesis protein FlhF;
Pssm-ID: 235904 [Multi-domain] Cd Length: 484 Bit Score: 45.73 E-value: 5.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQaspARTPPQASPTRtpPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PRK06995 73 VSRPAAPAAEPAPWLVEHAKRLTA---QREQLVARAAA--PAAPEAQAPAAPAERAAAENAARRLARAAAAAPRPRVPAD 147
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 88 ARSASTTSSPTRVYLVRATPVGAvPIRasparsapATRATRESpglSFPKFSWQETQRQLP 148
Cdd:PRK06995 148 AAAAVADAVKARIERIVNDTVMQ-ELR--------SLRGMLEE---QLASLAWGERQRRDP 196
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
9-131 |
5.34e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 46.01 E-value: 5.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPArtPPQASPTRTPPQASPAraPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07994 370 VPPQSAAPAASAQATAAPTAAVAPPQA--PAVPPPPASAPQQAPA--VPLPETTSQLLAARQQLQRAQGATKAKKSEPAA 445
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 111185930 89 RsasttssptrvylVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07994 446 A-------------SRARPVNSALERLASVRPAPSALEKAPAK 475
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
3-76 |
6.34e-05 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 45.31 E-value: 6.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARA-------PPQASPARTP--PQASPTRTPPQASPARAPPPQASPARASPARASLA 73
Cdd:PRK10905 134 RNGNASRQTAKTQTAERPATTRPARKqaviepkKPQATAKTEPkpVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTA 213
|
...
gi 111185930 74 RAP 76
Cdd:PRK10905 214 PVQ 216
|
|
| Treacle |
pfam03546 |
Treacher Collins syndrome protein Treacle; |
2-76 |
6.65e-05 |
|
Treacher Collins syndrome protein Treacle;
Pssm-ID: 427362 [Multi-domain] Cd Length: 480 Bit Score: 45.41 E-value: 6.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSP----ARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARAS---------PA 68
Cdd:pfam03546 31 DSDSEEETPAAKTPLQAKPSGKTPqvraASAPAKESPRKGAPPVPPGKTGPAAAQAQAGKPEEDSESSSeesdsegetPA 110
|
....*...
gi 111185930 69 RASLARAP 76
Cdd:pfam03546 111 AQTLTTSP 118
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-76 |
6.81e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.93 E-value: 6.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSP--ARTPPQASPARTSPARAPPQ----ASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03307 291 PRERSPSPSPssPGSGPAPSSPRASSSSSSSResssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPR 370
|
.
gi 111185930 76 P 76
Cdd:PHA03307 371 P 371
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
9-146 |
7.53e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.75 E-value: 7.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PRK07764 595 AGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAG 674
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 89 RSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFPKFSWQETQRQ 146
Cdd:PRK07764 675 GAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPS 732
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-132 |
7.55e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 7.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSS 81
Cdd:PHA03307 114 PDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEP 193
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 82 SGRSSSARSASTTSSPTRVYLVRATPVGAVPIR--ASPARSAPATRATRESPG 132
Cdd:PHA03307 194 PPSTPPAAASPRPPRRSSPISASASSPAPAPGRsaADDAGASSSDSSSSESSG 246
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
10-75 |
8.14e-05 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 45.50 E-value: 8.14e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 10 SPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PRK14965 392 PTPAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARSADPAAAASAGDRWRAFVAFV 457
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
3-77 |
8.43e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.55 E-value: 8.43e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 3 RGSHRNSSPARTPPQASPArtSPARAPPQASPARTPPQASPTRTPPQASPARAPPpqaSPARASPARASLARAPP 77
Cdd:PHA03307 345 PSPSRSPSPSRPPPPADPS--SPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGR---ARRRDATGRFPAGRPRP 414
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
3-136 |
1.07e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 45.31 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 3 RGSHRNSSPART--------PPQASPART-----SPARAPPQASPArtPPQASPTRTPPQASPARA--PPPQASPARASP 67
Cdd:PHA03247 2572 RPAPRPSEPAVTsrarrpdaPPQSARPRApvddrGDPRGPAPPSPL--PPDTHAPDPPPPSPSPAAnePDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 68 ARASLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPI----RASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLtslaDPPPPPPTPEPAPHALVSATPLP 2722
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
9-136 |
1.19e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 45.16 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTS-----PARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSG 83
Cdd:PHA03307 74 GPGTEAPANESRSTPTwslstLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPP 153
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 84 RSSSARsasttssptrvylvRATPVGAVPIR--ASPARSAPATRATRESPGLSFP 136
Cdd:PHA03307 154 AAGASP--------------AAVASDAASSRqaALPLSSPEETARAPSSPPAEPP 194
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
7-131 |
1.52e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.59 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARAPPQASPArTPPQASPTRTPPQASPARAPPPQASPARASP--ARASLARAPPSRSSSGR 84
Cdd:PRK07764 606 SGPPEEAARPAAPAAPAAPAAPAPAGAAA-APAEASAAPAPGVAAPEHHPKHVAVPDASDGgdGWPAKAGGAAPAAPPPA 684
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 111185930 85 SSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 685 PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731
|
|
| PRK14971 |
PRK14971 |
DNA polymerase III subunit gamma/tau; |
10-77 |
1.54e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.38 E-value: 1.54e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 10 SPARTPPQ-ASPARTSPArAPPQAS----PARTPPQASPTRTPPQASPARAP---PPQASPARASPARASLARAPP 77
Cdd:PRK14971 370 SGGRGPKQhIKPVFTQPA-AAPQPSaaaaASPSPSQSSAAAQPSAPQSATQPagtPPTVSVDPPAAVPVNPPSTAP 444
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
1-75 |
1.58e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 44.35 E-value: 1.58e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 1 MDRGSHRNSSPARTPPQ-ASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PRK14965 377 LERGAPAPPSAAWGAPTpAAPAAPPPAAAPPVPPAAPARPAAARPAPAPAPPAAAAPPARSADPAAAASAGDRWRA 452
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
8-77 |
1.89e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 1.89e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPAR-APPPQASPARASPARASLARAPP 77
Cdd:PRK07003 473 DSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREdAPAAAAPPAPEARPPTPAAAAPA 543
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
19-77 |
1.93e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 1.93e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 19 SPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK12270 37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAA 95
|
|
| FimV |
COG3170 |
Tfp pilus assembly protein FimV [Cell motility, Extracellular structures]; |
11-66 |
2.01e-04 |
|
Tfp pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 225711 [Multi-domain] Cd Length: 755 Bit Score: 44.13 E-value: 2.01e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 11 PARTPPQA-SPARTSPARAPPQASPARTPPQAS-PTRTPpqaSPARAPPPQASPARAS 66
Cdd:COG3170 142 PGYSPKSAlSAEPSHPVPAPAAASAPPPPPRAArPVRQP---APAPAAPGDTYTVRSG 196
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
27-131 |
2.09e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 27 RAPPQASPARTPPQASPTRTPPQASPArapPPQASPARASPARASLARAPPSRSSSGRSSSARSASTTSSPTRVYLVRAT 106
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAAPAAA---PAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPA 459
|
90 100
....*....|....*....|....*
gi 111185930 107 PVGAVPIRASPARSAPATRATRESP 131
Cdd:PRK07764 460 AAPSAQPAPAPAAAPEPTAAPAPAP 484
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
10-136 |
2.63e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 2.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 10 SPARTPPQAS-PARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSA 88
Cdd:PHA03307 164 SDAASSRQAAlPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSE 243
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 111185930 89 RSASTTSSPTRVYLVRATPVGAVPIRASPARS-APATRATRESPGLSFP 136
Cdd:PHA03307 244 SSGCGWGPENECPLPRPAPITLPTRIWEASGWnGPSSRPGPASSSSSPR 292
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
10-67 |
2.66e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 427171 [Multi-domain] Cd Length: 991 Bit Score: 43.99 E-value: 2.66e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 10 SPARTPPQASPARTSPARAPpqaspARTPPQASPTrTPPQASPARAPPPQASPARASP 67
Cdd:pfam03154 176 AQSGAASPPSPPPPGTTQAA-----TAGPTPSAPS-VPPQGSPATSQPPNQTQSTAAP 227
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
15-77 |
2.66e-04 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.90 E-value: 2.66e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 15 PPQASPARTSPARAPPQASPArTPPQASPtrtppqASPARAPPPQASPARASPARASLARAPP 77
Cdd:PLN02983 144 PPPPAPVVMMQPPPPHAMPPA-SPPAAQP------APSAPASSPPPTPASPPPAKAPKSSHPP 199
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
7-131 |
3.18e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.77 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTP-PQASPARTSP----ARAPPQASPARTPPQ----ASPTRTPPQASPARAPPPQASPA-RASPARASLARAP 76
Cdd:PHA03247 2675 QASSPPQRPrRRAARPTVGSltslADPPPPPPTPEPAPHalvsATPLPPGPAAARQASPALPAAPApPAVPAGPATPGGP 2754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 77 PSRSSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRAS----PARSAPATRATRESP 131
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESreslPSPWDPADPPAAVLA 2813
|
|
| FAP |
pfam07174 |
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment ... |
12-77 |
3.37e-04 |
|
Fibronectin-attachment protein (FAP); This family contains bacterial fibronectin-attachment proteins (FAP). Family members are rich in alanine and proline, are approximately 300 long, and seem to be restricted to mycobacteria. These proteins contain a fibronectin-binding motif that allows mycobacteria to bind to fibronectin in the extracellular matrix.
Pssm-ID: 429334 Cd Length: 301 Bit Score: 42.61 E-value: 3.37e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 12 ARTPPQASPARTSPARAPPQASPARTPPqASPTRTPPQASP--ARAPPPQASPARASPARASLARAPP 77
Cdd:pfam07174 37 AHADPEPAPPPPSTATAPPAPPPPPPAP-AAPAPPPPPAAPnaPNAPPPPADPNAPPPPPADPNAPPP 103
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
14-146 |
3.63e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.50 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 14 TPPQASPARtspaRAPPQASPartPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSAST 93
Cdd:PHA03377 551 TPPKVSPSD----RGPPKASP---PVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGPPASGPHEKQPPSSAPR 623
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 94 TSSPTRVYLVRATPVGAVPIRASPaRSAPATRATRESPGLSFPKFSWQETQRQ 146
Cdd:PHA03377 624 DMAPSVVRMFLRERLLEQSTGPKP-KSFWEMRAGRDGSGIQQEPSSRRQPATQ 675
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
11-68 |
3.72e-04 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 43.17 E-value: 3.72e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPA 68
Cdd:PRK06975 268 AAAQPATAAPAPSRMTDTNDSKSVTSQPAAAAAAPAPPPNPPATPPEPPARRGRGSAA 325
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
14-77 |
4.43e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 43.03 E-value: 4.43e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 111185930 14 TPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PRK14948 514 SGSASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP 577
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
2-67 |
4.86e-04 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.12 E-value: 4.86e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 2 DRGSHRNSSPARTPPQASP-ARTSPARAPPQASPARTPP--QASPTRTPPQASPARAPPPQASPARASP 67
Cdd:PHA03377 559 DRGPPKASPPVMAPPSTGPrVMATPSTGPRDMAPPSTGPrqQAKCKDGPPASGPHEKQPPSSAPRDMAP 627
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
7-73 |
5.36e-04 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 41.95 E-value: 5.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTP---PQASPARAPPPQASPARAS-------------PA-- 68
Cdd:PRK12757 121 IQQQAQQQQPPATTAQPQPVTPPRQTTAPVQPQTPAPVRTQpaaPVTQAVEAPKVEAEKEKEQrwmvqcgsfkgteQAes 200
|
....*.
gi 111185930 69 -RASLA 73
Cdd:PRK12757 201 vRAQLA 206
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
7-154 |
5.41e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.79 E-value: 5.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTrtpPQASpaRAPPPQASPARASPARASLARAPPSRSSSgrss 86
Cdd:PHA03269 38 QKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPT---PAAS--EKFDPAPAPHQAASRAPDPAVAPQLAAAP---- 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 87 sarsasttssptrvylvraTPVGAVPIRASP-ARSAPATRATRESPGLSFPKFSWQETQ------RQLPLIGCVI 154
Cdd:PHA03269 109 -------------------KPDAAEAFTSAAqAHEAPADAGTSAASKKPDPAAHTQHSPppfaytRSMEHIACTH 164
|
|
| PLN02983 |
PLN02983 |
biotin carboxyl carrier protein of acetyl-CoA carboxylase |
9-62 |
5.50e-04 |
|
biotin carboxyl carrier protein of acetyl-CoA carboxylase
Pssm-ID: 215533 [Multi-domain] Cd Length: 274 Bit Score: 42.13 E-value: 5.50e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 111185930 9 SSPARTPPqASPARTSPARAPPQASPARTPPQASPTRT-----PPQASPA-----RAPPPQASP 62
Cdd:PLN02983 156 PPPHAMPP-ASPPAAQPAPSAPASSPPPTPASPPPAKApksshPPLKSPMagtfyRSPAPGEPP 218
|
|
| Pro-rich |
pfam15240 |
Proline-rich; This family includes several eukaryotic proline-rich proteins. |
6-77 |
5.54e-04 |
|
Proline-rich; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 434562 [Multi-domain] Cd Length: 167 Bit Score: 40.74 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 6 HRNSSPARTPPQaSPARTSPARAPPQASPARTPPQA--SPTRTPPQASPAR-------APPPQASPARASPARASLARAP 76
Cdd:pfam15240 46 PQGPPPGGFPPR-PPASGRPPGPPPQGGPQQPPPQGgkQPQGPPPQGGPQRpppgkpqGPPPQGGPQQQGPPPPGKPQGP 124
|
.
gi 111185930 77 P 77
Cdd:pfam15240 125 P 125
|
|
| PRK11855 |
PRK11855 |
dihydrolipoamide acetyltransferase; Reviewed |
14-74 |
5.83e-04 |
|
dihydrolipoamide acetyltransferase; Reviewed
Pssm-ID: 237000 [Multi-domain] Cd Length: 547 Bit Score: 42.50 E-value: 5.83e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 14 TPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLAR 74
Cdd:PRK11855 194 VAAAAPAAAAAPAAAAPAAAAAAAPAPAPAAAAAPAAAAPAAAAAPGKAPHASPAVRRLAR 254
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-75 |
5.92e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 5.92e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARA 75
Cdd:PHA03307 317 SSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRA 390
|
|
| PHA03269 |
PHA03269 |
envelope glycoprotein C; Provisional |
5-75 |
6.48e-04 |
|
envelope glycoprotein C; Provisional
Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 42.41 E-value: 6.48e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 5 SHRNSSPARTPPQASPARTSPARAP-PQAS----PARTPPQASPTRTPPQASP--ARAPPPQASPARASPARASLARA 75
Cdd:PHA03269 50 ASRAPDPAVAPTSAASRKPDLAQAPtPAASekfdPAPAPHQAASRAPDPAVAPqlAAAPKPDAAEAFTSAAQAHEAPA 127
|
|
| PRK14965 |
PRK14965 |
DNA polymerase III subunits gamma and tau; Provisional |
21-77 |
6.63e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain] Cd Length: 576 Bit Score: 42.42 E-value: 6.63e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 21 ARTSPARAPPQASPARTPPQASP--TRTPPQASPARAPPPQASPARASPARAslARAPP 77
Cdd:PRK14965 378 ERGAPAPPSAAWGAPTPAAPAAPppAAAPPVPPAAPARPAAARPAPAPAPPA--AAAPP 434
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
7-136 |
6.67e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 6.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 7 RNSSPARTPPQASPARTSPARA--PPQASPART-PPQASPTRTPPQASPARAPPPQASPARASP----ARASLARAPPSR 79
Cdd:PHA03247 2795 RESLPSPWDPADPPAAVLAPAAalPPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPggdvRRRPPSRSPAAK 2874
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 80 SSSGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03247 2875 PAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQP 2931
|
|
| COG5373 |
COG5373 |
Uncharacterized membrane protein [Function unknown]; |
10-76 |
6.84e-04 |
|
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 227665 [Multi-domain] Cd Length: 931 Bit Score: 42.50 E-value: 6.84e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 10 SPARTP--PQASPARTSPARAPPQASPARTPPQ----ASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:COG5373 49 KAAEQMaaPEAAEAAPLPAAAESIASPEVPPPVppapAQEGEAPAAEQPSAVPAPSAAPAPAEPVEPSLAANP 121
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
13-132 |
7.65e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 7.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 13 RTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSSARSAS 92
Cdd:PHA03307 257 LPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESS 336
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 111185930 93 TTSSPTRVYLV-------RATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PHA03307 337 RGAAVSPGPSPsrspspsRPPPPADPSSPRKRPRPSRAPSSPAASAG 383
|
|
| Pro-rich |
pfam15240 |
Proline-rich; This family includes several eukaryotic proline-rich proteins. |
2-77 |
7.84e-04 |
|
Proline-rich; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 434562 [Multi-domain] Cd Length: 167 Bit Score: 40.35 E-value: 7.84e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:pfam15240 70 QGGPQQPPPQGGKQPQGPPPQGGPQRPPPGKPQGPPPQGGPQQQGPPPPGKPQGPPPQGGGPPPQPGNPQGPPPPP 145
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
1-130 |
8.26e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.47 E-value: 8.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 1 MDRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPA-RAPPPQASPARASPARASLARAPPSR 79
Cdd:PHA03307 85 RSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMlRPVGSPGPPPAASPPAAGASPAAVAS 164
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 111185930 80 SSSGRSSSARSASTTSSPTRvylVRATPVGAVPIRASPARSAPATRATRES 130
Cdd:PHA03307 165 DAASSRQAALPLSSPEETAR---APSSPPAEPPPSTPPAAASPRPPRRSSP 212
|
|
| DedD |
COG3147 |
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ... |
2-65 |
8.75e-04 |
|
Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225689 [Multi-domain] Cd Length: 226 Bit Score: 41.03 E-value: 8.75e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPPQAS---PARTPPQASPTRTPPQASPARAPPPQASPARA 65
Cdd:COG3147 80 DAGDAAAASVDPQPVAQPPVESTPAGVPVAAQtpkPVKPPKQPPAGAVPAKPTPKPEPKPVAEPAAA 146
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
9-76 |
9.16e-04 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 41.71 E-value: 9.16e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPArapPPQASPARASPARASLARAP 76
Cdd:PRK12373 247 ARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAAAEPA---PKEAAKAAAAAAKPALEDKP 311
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
10-77 |
9.70e-04 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 41.15 E-value: 9.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 10 SPARTPPQASPARTSPARAPpqASPARTPPQ---ASPTRTPPQASPARAPPPQAsPARASPAR----ASLAR------AP 76
Cdd:PHA03381 103 GPARGARGPAGSRGRGRRAE--SPSPRDPPNpkgASAPRGRKSACADSAALLDA-PAPAAPKRqktpAGLARklhfstAP 179
|
.
gi 111185930 77 P 77
Cdd:PHA03381 180 T 180
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
8-123 |
1.18e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PHA03307 110 GPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSP 189
|
90 100 110
....*....|....*....|....*....|....*.
gi 111185930 88 ARSASTTSSPTRvyLVRATPVGAVPIRASPARSAPA 123
Cdd:PHA03307 190 PAEPPPSTPPAA--ASPRPPRRSSPISASASSPAPA 223
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
5-77 |
1.35e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 40.76 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 5 SHRNSSPARTPPQAS-------PARTSPARAPPQASPARTPPQASPTRTP------PQASPARAPPPQASP-ARASPARA 70
Cdd:PHA03381 44 ARRGAGQARGRSQAErrfhhydEARADYPYYTGSSSEDERPADPRPSRRPhaqpeaSGPGPARGARGPAGSrGRGRRAES 123
|
....*..
gi 111185930 71 SLARAPP 77
Cdd:PHA03381 124 PSPRDPP 130
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
9-77 |
1.38e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 41.09 E-value: 1.38e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPP 77
Cdd:PHA03291 206 ATPRPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGTTPEAEGTPAPPTPGGGEAPPANATP 274
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
10-63 |
1.39e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 41.44 E-value: 1.39e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 10 SPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQAS-PARAPPPQASPA 63
Cdd:PRK01297 18 APAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDkPRRERKPKPASL 72
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
4-137 |
1.39e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 4 GSHRNSSPARTPPQASPARTSPARAPPQAS-PARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAPPSRSSS 82
Cdd:PHA03307 163 ASDAASSRQAALPLSSPEETARAPSSPPAEpPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSS 242
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 83 GRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFPK 137
Cdd:PHA03307 243 ESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPS 297
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
9-127 |
1.47e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 41.09 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPpqASPARTSPARAPPQASPARTPPQASPTRTPPQ---ASPARA--PPPQAS--PARASPARASLARAPPSRSS 81
Cdd:PTZ00436 227 AAPAKAA--APPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAkaaAPPAKAaaPPAKAAapPAKAAAPPAKAAAAPAKAAA 304
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 111185930 82 SGRSSSARSASTTSSPTRVylvrATPVGAVPIRASPARSAPATRAT 127
Cdd:PTZ00436 305 APAKAAAAPAKAAAPPAKA----AAPPAKAATPPAKAAAPPAKAAA 346
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
5-136 |
1.52e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 41.09 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 5 SHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQAS--PARAS--PARASlarAPPSRS 80
Cdd:PTZ00436 212 SGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAapPAKAAapPAKAA---APPAKA 288
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 81 SSGRSSSARSASTTSSPTRVYLVRATPVGAVPIR--ASPARSA--PATRATRESPGLSFP 136
Cdd:PTZ00436 289 AAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKaaAPPAKAAtpPAKAAAPPAKAAAAP 348
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
5-76 |
1.54e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 41.38 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 5 SHRNSSPARTPPQASPARTsparAPPQASPARTPPQASPT----------RTPPQASPARAPPPQASPARASPARASLAR 74
Cdd:PHA03309 1820 SSSSSSSSSSSPSSRPSRS----ATPSLSPSPSPPRRAPVdrsrsgrrreRDRPSANPFRWAPRQRSRADHSPDGTAPGD 1895
|
..
gi 111185930 75 AP 76
Cdd:PHA03309 1896 AP 1897
|
|
| PRK06549 |
PRK06549 |
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated |
24-76 |
1.57e-03 |
|
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Pssm-ID: 235826 [Multi-domain] Cd Length: 130 Bit Score: 38.64 E-value: 1.57e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 24 SPARAPPQASPARTPpqasptrTPPQASPARAPPPQAsPARASPARASLARAP 76
Cdd:PRK06549 23 APAQAAAPAQPASTP-------VPVPTEASPQVEAQA-PQPAAAAGADAMPSP 67
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
9-75 |
1.74e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 40.24 E-value: 1.74e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPP--QASPA-RAPPPQASPARASPARASLARA 75
Cdd:PRK12495 106 AEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTaqPATPDeRRSPRQRPPVSGEPPTPSTPDA 175
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
23-130 |
1.82e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.12 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 23 TSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARA----SLARAPPSRSSSGRSSSARSASTTSSPT 98
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAeasaAPAPGVAAPEHHPKHVAVPDASDGGDGW 669
|
90 100 110
....*....|....*....|....*....|..
gi 111185930 99 RVYLVRATPVGAVPIRASPARSAPATRATRES 130
Cdd:PRK07764 670 PAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
8-63 |
1.87e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 1.87e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 8 NSSPARTPPQASPARTSPA--RAPPQASPARTPPQASPTRTPPQASPARAPPPQASPA 63
Cdd:PRK12757 119 VQIQQQAQQQQPPATTAQPqpVTPPRQTTAPVQPQTPAPVRTQPAAPVTQAVEAPKVE 176
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
8-63 |
2.01e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 40.39 E-value: 2.01e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPA 63
Cdd:PRK10856 190 QTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPLPTDQAGVS 245
|
|
| PRK06975 |
PRK06975 |
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed |
17-76 |
2.14e-03 |
|
bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed
Pssm-ID: 235899 [Multi-domain] Cd Length: 656 Bit Score: 40.86 E-value: 2.14e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 17 QASPARTSPARAPP-QASPARTPPQASPTRTPPQASPARAPPP-QASPARASPARASLARAP 76
Cdd:PRK06975 264 TWADAAAQPATAAPaPSRMTDTNDSKSVTSQPAAAAAAPAPPPnPPATPPEPPARRGRGSAA 325
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
12-123 |
2.31e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.08 E-value: 2.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 12 ARTPPQASPARTS-PARAPPQASPARTPPQASPTRTP-----PQASPARAPPPQASPAR-ASPAR---ASLARAPPSRSS 81
Cdd:PHA03247 2816 AALPPAASPAGPLpPPTSAQPTAPPPPPGPPPPSLPLggsvaPGGDVRRRPPSRSPAAKpAAPARppvRRLARPAVSRST 2895
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 111185930 82 SGRSSSARSASTTSSPTRVYLVRATPVGAVPIRASPARSAPA 123
Cdd:PHA03247 2896 ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPP 2937
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
20-132 |
2.39e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 40.31 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 20 PARTSPAR---APPQASPARTPPQASPTR----------TPPQASPARAPPPQASPARASPARASLARAPpsrsssgrss 86
Cdd:PRK10905 127 PATVAPVRngnASRQTAKTQTAERPATTRparkqaviepKKPQATAKTEPKPVAQTPKRTEPAAPVASTK---------- 196
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 111185930 87 sarsastTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPG 132
Cdd:PRK10905 197 -------APAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTAG 235
|
|
| DamX |
COG3266 |
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ... |
9-77 |
2.45e-03 |
|
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 225805 [Multi-domain] Cd Length: 292 Bit Score: 39.94 E-value: 2.45e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 9 SSPARTPPQASPARTSPARA----PPQASPARTPPQASPTRTPPQASPARAPPPQASPARASpARASLARAPP 77
Cdd:COG3266 138 VRNASVPTAERPAITRPVRAqavsEPAVEPKAAKTATATEAKVQTASPAQTPATPPAGKGAA-ASGQLKSAPS 209
|
|
| PRK01297 |
PRK01297 |
ATP-dependent RNA helicase RhlB; Provisional |
17-69 |
2.52e-03 |
|
ATP-dependent RNA helicase RhlB; Provisional
Pssm-ID: 234938 [Multi-domain] Cd Length: 475 Bit Score: 40.28 E-value: 2.52e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 111185930 17 QASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPAR 69
Cdd:PRK01297 11 KGEAEQPAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRR 63
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
11-136 |
2.97e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQA-SPARASPARASLARAPPsRSSSGRSSSAR 89
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAAlAPKAAAAAAATRAEAPP-AAPAPPATADR 438
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 111185930 90 SASTTSSPTRVYLVRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07003 439 GDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAP 485
|
|
| Pro-rich |
pfam15240 |
Proline-rich; This family includes several eukaryotic proline-rich proteins. |
9-77 |
3.00e-03 |
|
Proline-rich; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 434562 [Multi-domain] Cd Length: 167 Bit Score: 38.81 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARA---PPQASP--ARTPPQASPTRTPPQA--------SPARAPPPQASPARASPARASLARA 75
Cdd:pfam15240 82 KQPQGPPPQGGPQRPPPGKPqgpPPQGGPqqQGPPPPGKPQGPPPQGggpppqpgNPQGPPPPPPGNPQGPPQRPPQPGN 161
|
..
gi 111185930 76 PP 77
Cdd:pfam15240 162 PQ 163
|
|
| motB |
PRK12799 |
flagellar motor protein MotB; Reviewed |
8-130 |
3.03e-03 |
|
flagellar motor protein MotB; Reviewed
Pssm-ID: 183756 [Multi-domain] Cd Length: 421 Bit Score: 40.08 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 8 NSSPARTPPQASPARTSPARAPpqaSPARTPPqASPTRTPPQASPARAPPPqaSPARASPARASLARAPPSRSSSGRSSS 87
Cdd:PRK12799 309 AVTQSSAITPSSAAIPSPAVIP---SSVTTQS-ATTTQASAVALSSAGVLP--SDVTLPGTVALPAAEPVNMQPQPMSTT 382
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 111185930 88 ARSASTTSSPTRvylVRATPVGAVPirASPARSAPATRATRES 130
Cdd:PRK12799 383 ETQQSSTGNITS---TANGPTTSLP--AAPASNIPVSPTSRDA 420
|
|
| PHA03291 |
PHA03291 |
envelope glycoprotein I; Provisional |
3-74 |
3.10e-03 |
|
envelope glycoprotein I; Provisional
Pssm-ID: 223033 [Multi-domain] Cd Length: 401 Bit Score: 39.94 E-value: 3.10e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQAS----PTRTPPQASPA--RAPPPQASPA-RASPARASLAR 74
Cdd:PHA03291 209 RPTPRTTASPETTPTPSTTTSPPSTTIPAPSTTIAAPQAGttpeAEGTPAPPTPGggEAPPANATPApEASRYELTVTQ 287
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
3-77 |
3.18e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 40.54 E-value: 3.18e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 3 RGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARaspaRASLARAPP 77
Cdd:PHA03307 862 GGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLGPMPPGGPDP----RGGFRRVPP 932
|
|
| PRK12495 |
PRK12495 |
hypothetical protein; Provisional |
12-129 |
3.25e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 183558 [Multi-domain] Cd Length: 226 Bit Score: 39.08 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 12 ARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQasPARASPARASLARAPPSRSSSGRSSSARSA 91
Cdd:PRK12495 100 AQPAAEAEAADQSAPPEASSTSATDEAATDPPATAAARDGPTPDPTAQ--PATPDERRSPRQRPPVSGEPPTPSTPDAHV 177
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 111185930 92 STTSSPTRVYLVRAtpVGAVPIRAS----PARSAPATRATRE 129
Cdd:PRK12495 178 AGTLQAARESLVET--LARFARRAAatddPRRAREYLEAARE 217
|
|
| PRK11633 |
PRK11633 |
cell division protein DedD; Provisional |
11-68 |
3.37e-03 |
|
cell division protein DedD; Provisional
Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.22 E-value: 3.37e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 11 PARTPPQASPARTSPARAPPQASPARTPPQASPTRtPPQASPARAPPPQASPARASPA 68
Cdd:PRK11633 87 PATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP-QQKVEAPPAPKPEPKPVVEEKA 143
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
9-68 |
3.61e-03 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 428305 [Multi-domain] Cd Length: 141 Bit Score: 38.15 E-value: 3.61e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 9 SSPARTP---PQASPARTSPARAPPQASPARTPPQASPT-----RTPPQASPARAPPPQASPARASPA 68
Cdd:pfam05104 74 PSPALEPepvPQPVPAPVTPVPAPPSEKPAPSPKEKKKKekkaaKVEPAESPEVNSPKPVSAKKEAPL 141
|
|
| DUF1986 |
pfam09342 |
Domain of unknown function (DUF1986); This domain is found in serine proteases and is ... |
318-417 |
3.61e-03 |
|
Domain of unknown function (DUF1986); This domain is found in serine proteases and is predicted to contain disulphide bonds.
Pssm-ID: 286432 Cd Length: 116 Bit Score: 37.53 E-value: 3.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 318 WPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFfvtrekllegWKVYAGTSNLHQLPEAASiSQIIINGNYtdEQ----DD 393
Cdd:pfam09342 1 WPWIAKVYLDGNMICSGVLIDASWVIVSGSCL----------RDTNLRHQYISVVLGGAK-TLKSIEGPY--EQivrvDC 67
|
90 100 110
....*....|....*....|....*....|
gi 111185930 394 Y------DIALIRLSKPLTLSAHIHPACLP 417
Cdd:pfam09342 68 RhdipesEISLLHLASPASFSNHVLPTFVP 97
|
|
| PRK14948 |
PRK14948 |
DNA polymerase III subunit gamma/tau; |
8-68 |
3.75e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 39.95 E-value: 3.75e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 8 NSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPA 68
Cdd:PRK14948 517 ASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPP 577
|
|
| half-pint |
TIGR01645 |
poly-U binding splicing factor, half-pint family; The proteins represented by this model ... |
14-68 |
4.15e-03 |
|
poly-U binding splicing factor, half-pint family; The proteins represented by this model contain three RNA recognition motifs (rrm: pfam00076) and have been characterized as poly-pyrimidine tract binding proteins associated with RNA splicing factors. In the case of PUF60 (GP|6176532), in complex with p54, and in the presence of U2AF, facilitates association of U2 snRNP with pre-mRNA.
Pssm-ID: 130706 [Multi-domain] Cd Length: 612 Bit Score: 40.05 E-value: 4.15e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 14 TPPQASPARTSPARAP--PQASPARTPPQ----ASPTRTPPQASPARAPPPQA-SPARASPA 68
Cdd:TIGR01645 344 NKAVVSSAKKEAEEVPplPQAAPAVVKPGpmeiPTPVPPPGLAIPSLVAPPGLvAPTEINPS 405
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
13-76 |
4.33e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 39.93 E-value: 4.33e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 13 RTPPQASPART-SPARAPPQASPARTPPQASP--TRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PRK14954 393 KAPEPDLPQPDrHPGPAKPEAPGARPAELPSPasAPTPEQQPPVARSAPLPPSPQASAPRNVASGKP 459
|
|
| PRK10547 |
PRK10547 |
chemotaxis protein CheA; Provisional |
15-71 |
4.43e-03 |
|
chemotaxis protein CheA; Provisional
Pssm-ID: 236712 [Multi-domain] Cd Length: 670 Bit Score: 39.71 E-value: 4.43e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 111185930 15 PPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARAS 71
Cdd:PRK10547 219 ADQITFETAVAAPQEKAEETTEVVEVSPKISVPPVLKLAAEQAPAGRVEREKTARSS 275
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
9-136 |
4.67e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.97 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTP-------------PQASPARAPPP-QASPARASPARASLAR 74
Cdd:PRK07764 616 AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPkhvavpdasdggdGWPAKAGGAAPaAPPPAPAPAAPAAPAG 695
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 75 APPSRSSSgrsssarsasttssptrvylvrATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PRK07764 696 AAPAQPAP----------------------APAATPPAGQADDPAAQPPQAAQGASAPSPAA 735
|
|
| Mif2_N |
pfam15624 |
Kinetochore CENP-C fungal homolog, Mif2, N-terminal; Mif2_N is a family of fungal proteins ... |
2-57 |
4.99e-03 |
|
Kinetochore CENP-C fungal homolog, Mif2, N-terminal; Mif2_N is a family of fungal proteins homologous to mammalian CENP-C. On depletion of CENP-C proper formation of both centromeres and kinetochores is prevented. The N-terminal of CENP-C is necessary for recruitment of some but not all components of the Mis12 complex of the kinetochore.
Pssm-ID: 434820 Cd Length: 134 Bit Score: 37.30 E-value: 4.99e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSPARTPPQA-SPART---SPARappqaspaRTPPQASPTRTPPQASPARAPP 57
Cdd:pfam15624 73 DLLSGRRRSPRLPPPRArSPAKTnlnSPAR--------RNPSLALDQPARPSSSPTRGAS 124
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
6-76 |
5.13e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 38.84 E-value: 5.13e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 111185930 6 HRNSSPARTP-PQASPARTSPARAPPQASPARTPPQASPT---RTPPQ---ASPARAPPPqASPARASPARASLARAP 76
Cdd:PHA03381 84 PADPRPSRRPhAQPEASGPGPARGARGPAGSRGRGRRAESpspRDPPNpkgASAPRGRKS-ACADSAALLDAPAPAAP 160
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
9-77 |
5.43e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 39.66 E-value: 5.43e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 9 SSPARTPPQASPARTSPARAPpqaSPaRTPPQASPTRTPPQASPARAPP--PQASPARASPAR-ASLARAPP 77
Cdd:PRK14959 410 PAAGMTPSSAAPATPAPSAAP---SP-RVPWDDAPPAPPRSGIPPRPAPrmPEASPVPGAPDSvASASDAPP 477
|
|
| motB |
PRK05996 |
MotB family protein; |
4-76 |
5.44e-03 |
|
MotB family protein;
Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 39.30 E-value: 5.44e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 111185930 4 GSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PRK05996 202 GQAREQAQGAKSATAAPATVPQAAPLPQAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMPDDQQKEA 274
|
|
| PHA03201 |
PHA03201 |
uracil DNA glycosylase; Provisional |
1-70 |
5.51e-03 |
|
uracil DNA glycosylase; Provisional
Pssm-ID: 165468 Cd Length: 318 Bit Score: 39.11 E-value: 5.51e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 1 MDRGSHRNSSPARTPPqaSPARTSPAraPPQASPARTPPqasptrTPPqaSPARAPPPQASPARASPARA 70
Cdd:PHA03201 1 MKRARSRSPSPPRRPS--PPRPTPPR--SPDASPEETPP------SPP--GPGAEPPPGRAAGPAAPRRR 58
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
10-77 |
5.60e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 39.54 E-value: 5.60e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 111185930 10 SPARTPPQASPARTSPARAPPQASPARTPpqASPTRTPPQA-SPARAPPPQASPARASPA---RASLARAPP 77
Cdd:PRK14954 383 SPAGSPDVKKKAPEPDLPQPDRHPGPAKP--EAPGARPAELpSPASAPTPEQQPPVARSAplpPSPQASAPR 452
|
|
| PTZ00436 |
PTZ00436 |
60S ribosomal protein L19-like protein; Provisional |
2-132 |
5.71e-03 |
|
60S ribosomal protein L19-like protein; Provisional
Pssm-ID: 185616 [Multi-domain] Cd Length: 357 Bit Score: 39.16 E-value: 5.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSPARTPPQASPARTSPARAPPQASPARTPPQASPTRTPPQASPARA--PPPQAS--PARASPARASLARAPP 77
Cdd:PTZ00436 186 ERARREDAAAAAAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAaaAPAKAAaaPAKAAAPPAKAAAPPA 265
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 111185930 78 SRSSSGRSSSARSASTTSSPTRVYLVRATPVGA-VPIRASPARSAPATRATRESPG 132
Cdd:PTZ00436 266 KAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAApAKAAAAPAKAAAAPAKAAAPPA 321
|
|
| PRK11901 |
PRK11901 |
hypothetical protein; Reviewed |
11-77 |
6.39e-03 |
|
hypothetical protein; Reviewed
Pssm-ID: 237015 [Multi-domain] Cd Length: 327 Bit Score: 38.90 E-value: 6.39e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 111185930 11 PARTPPQASPARTSPARAPPQAS--PARTPPQASPTRTPPQAspaRAPPPQASPARASPARASLARAPP 77
Cdd:PRK11901 178 PATVAPSKGAKVPATAETHPTPPqkPATKKPAVNHHKTATVA---VPPATSGKPKSGAASARALSSAPA 243
|
|
| PRK12757 |
PRK12757 |
cell division protein FtsN; Provisional |
13-77 |
6.97e-03 |
|
cell division protein FtsN; Provisional
Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 38.49 E-value: 6.97e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 13 RTPPQASPARTSPARAPPQASPARTPPQAspTRTPPQASPARAPPPQASPARASPArASLARAPP 77
Cdd:PRK12757 110 QTPQVPRSTVQIQQQAQQQQPPATTAQPQ--PVTPPRQTTAPVQPQTPAPVRTQPA-APVTQAVE 171
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2-136 |
7.87e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 39.00 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 111185930 2 DRGSHRNSSPARTPPQAS-----PARTSPAR-APPQASPARTPPQASPTRTPPQASPARAPPPQASParaSPARASLARA 75
Cdd:PHA03307 779 EPQRGAGSSPPVRAEAAFrrpgrLRRSGPAAdAASRTASKRKSRSHTPDGGSESSGPARPPGAAARP---PPARSSESSK 855
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 111185930 76 PPSRSSSGRSSSARSASTTSSPTRvylvRATPVGAVPIRASPARSAPATRATRESPGLSFP 136
Cdd:PHA03307 856 SKPAAAGGRARGKNGRRRPRPPEP----RARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVK 912
|
|
| PRK14959 |
PRK14959 |
DNA polymerase III subunits gamma and tau; Provisional |
14-76 |
8.86e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184923 [Multi-domain] Cd Length: 624 Bit Score: 38.89 E-value: 8.86e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 111185930 14 TPPQASPARTSPARA--PPQASPARTPPQASPTRTPPQASPARAPPPQASPARASPARASLARAP 76
Cdd:PRK14959 399 TPGTQGPQGTAPAAGmtPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSGIPPRPAPRMPEASPVP 463
|
|
| PRK10856 |
PRK10856 |
cytoskeleton protein RodZ; |
9-72 |
9.93e-03 |
|
cytoskeleton protein RodZ;
Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 38.08 E-value: 9.93e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 111185930 9 SSPARTPPQASPARTSPARAPPQASPArtPPQASPTRTPPQASPARAPPPQASPARASPARASL 72
Cdd:PRK10856 176 PAPAAPVDTTPTNSQTPAVATAPAPAV--DPQQNAVVAPSQANVDTAATPAPAAPATPDGAAPL 237
|
|
|