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Conserved domains on  [gi|157820737|ref|NP_001101232|]
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nucleolar and spindle-associated protein 1 isoform 3 [Rattus norvegicus]

Protein Classification

NUSAP domain-containing protein( domain architecture ID 11240195)

NUSAP domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
NUSAP pfam16006
Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a ...
157-370 5.71e-86

Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a role in spindle microtubule organization


:

Pssm-ID: 464970 [Multi-domain]  Cd Length: 293  Bit Score: 262.38  E-value: 5.71e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  157 PLEKRSLCTDGFSKLGNSKrISATTPNFKRLHEAHFKKMESIDEYMVRKKKHFKEHD-SLNELKLDKK------------ 223
Cdd:pfam16006   1 SGGKIPRYTGGSSKPGKNK-TKPTTPNFKKLHEAHFKKMESIDDYIERKKKRLEALSnSVKELKILTKkanltesksstk 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  224 --------VTPVPPRGRLSVLCTPARQRCSQGH---------------------SATKMNVRFSAATKDNEHKCSLTKTP 274
Cdd:pfam16006  80 qssskgslFSPVPRRGRPSVTCTPASQRRSPRRslgtasksilcekssfkpsvlSATKMNVRFSEATKDNEHKRSLTKTP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  275 ARKSPHvTAPGSASKGQAVLKTPKLKTTERNSTA---------------------------------------GKLKPWG 315
Cdd:pfam16006 160 ARKSPH-TVLGSTPKGQAVLGTNKLKTKKGNSAAvitpfkftteasqtpvsnkkpvfdlkaslsrplnyqphkGKLKPWG 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 157820737  316 QAKENNSLNECVSRVTLHRKTYKQPPLQTREEQRKRHVQERKERKEKLLEARRNL 370
Cdd:pfam16006 239 DSKENTALNEHVSRINSHKKNYKQPHLQTREERRKKHEQERKQKKDKVLGARRGL 293
 
Name Accession Description Interval E-value
NUSAP pfam16006
Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a ...
157-370 5.71e-86

Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a role in spindle microtubule organization


Pssm-ID: 464970 [Multi-domain]  Cd Length: 293  Bit Score: 262.38  E-value: 5.71e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  157 PLEKRSLCTDGFSKLGNSKrISATTPNFKRLHEAHFKKMESIDEYMVRKKKHFKEHD-SLNELKLDKK------------ 223
Cdd:pfam16006   1 SGGKIPRYTGGSSKPGKNK-TKPTTPNFKKLHEAHFKKMESIDDYIERKKKRLEALSnSVKELKILTKkanltesksstk 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  224 --------VTPVPPRGRLSVLCTPARQRCSQGH---------------------SATKMNVRFSAATKDNEHKCSLTKTP 274
Cdd:pfam16006  80 qssskgslFSPVPRRGRPSVTCTPASQRRSPRRslgtasksilcekssfkpsvlSATKMNVRFSEATKDNEHKRSLTKTP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  275 ARKSPHvTAPGSASKGQAVLKTPKLKTTERNSTA---------------------------------------GKLKPWG 315
Cdd:pfam16006 160 ARKSPH-TVLGSTPKGQAVLGTNKLKTKKGNSAAvitpfkftteasqtpvsnkkpvfdlkaslsrplnyqphkGKLKPWG 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 157820737  316 QAKENNSLNECVSRVTLHRKTYKQPPLQTREEQRKRHVQERKERKEKLLEARRNL 370
Cdd:pfam16006 239 DSKENTALNEHVSRINSHKKNYKQPHLQTREERRKKHEQERKQKKDKVLGARRGL 293
 
Name Accession Description Interval E-value
NUSAP pfam16006
Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a ...
157-370 5.71e-86

Nucleolar and spindle-associated protein; This family of microtubule-associated proteins has a role in spindle microtubule organization


Pssm-ID: 464970 [Multi-domain]  Cd Length: 293  Bit Score: 262.38  E-value: 5.71e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  157 PLEKRSLCTDGFSKLGNSKrISATTPNFKRLHEAHFKKMESIDEYMVRKKKHFKEHD-SLNELKLDKK------------ 223
Cdd:pfam16006   1 SGGKIPRYTGGSSKPGKNK-TKPTTPNFKKLHEAHFKKMESIDDYIERKKKRLEALSnSVKELKILTKkanltesksstk 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  224 --------VTPVPPRGRLSVLCTPARQRCSQGH---------------------SATKMNVRFSAATKDNEHKCSLTKTP 274
Cdd:pfam16006  80 qssskgslFSPVPRRGRPSVTCTPASQRRSPRRslgtasksilcekssfkpsvlSATKMNVRFSEATKDNEHKRSLTKTP 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157820737  275 ARKSPHvTAPGSASKGQAVLKTPKLKTTERNSTA---------------------------------------GKLKPWG 315
Cdd:pfam16006 160 ARKSPH-TVLGSTPKGQAVLGTNKLKTKKGNSAAvitpfkftteasqtpvsnkkpvfdlkaslsrplnyqphkGKLKPWG 238
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 157820737  316 QAKENNSLNECVSRVTLHRKTYKQPPLQTREEQRKRHVQERKERKEKLLEARRNL 370
Cdd:pfam16006 239 DSKENTALNEHVSRINSHKKNYKQPHLQTREERRKKHEQERKQKKDKVLGARRGL 293
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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