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Conserved domains on  [gi|157819271|ref|NP_001102571|]
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uncharacterized protein C14orf93 homolog [Rattus norvegicus]

Protein Classification

DUF4616 domain-containing protein( domain architecture ID 10634122)

DUF4616 domain-containing protein similar to Homo sapiens protein C14orf93

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4616 pfam15394
Domain of unknown function (DUF4616); This protein family is a domain of unknown function ...
2-539 0e+00

Domain of unknown function (DUF4616); This protein family is a domain of unknown function found at the C-terminal domain of the proteins. This protein family is found in eukaryotes. Proteins in this family are typically between 166 and 538 amino acids in length.


:

Pssm-ID: 464701  Cd Length: 505  Bit Score: 841.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271    2 SFSATILFSPPSGSEARCCCCACKSETSQGSTGSQGGNPLAGTPITVTGHGLAVQSSEQLLHIIYQRVDKAVGLAEAALG 81
Cdd:pfam15394   1 SFSATILFSPPNAKEAKCCCCTCKQEPAAQTSAPPPLPPPPSTPITVTGSGLALQSPDQLLHIIYQRVEKAASLAEVALS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271   82 LARANNELLKQLQEEVGELRQGKVCTAdedgesraRSPPPEEPGVLKGSPGEAsktvpAMEEECDSVGSGVQVVIEELRQ 161
Cdd:pfam15394  81 LAKANNEALKRLEEDVGALRRGTPPSL--------KASPPCVPEEHQEAEGEE-----EEEQEAEGFGNGVQVVIEELRQ 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  162 LGAAStVGQGPLGFfAAPQRDarlpgctlaavEGAPMLNPmAADDYAASEGSIQRVLVPAYAKQLSPATQLAIQRASSEP 241
Cdd:pfam15394 148 LGAAA-GPPGHLGF-SPVQLG-----------TGSGGLAG-ALEDYNATIPPIQRVVAPTFNPELSPPSPPVCITGLADS 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  242 GPEGGTKLPATRPEDMlGSAALDSALEESGPGGTGELSRSLGFIGSPCRIRGTGQKNSRRKRDLVLSKLVHNVHNHITND 321
Cdd:pfam15394 214 NIENSEKSVSPNPATS-ALQSLDSALDYVSPISTGEVRRSLGMPLAPLRPRSSGQKNARRKRDLVLSKLVHNVHNHVTND 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  322 KRFNGSESIKSSWNISVVKFLLEKLKQELMASPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 401
Cdd:pfam15394 293 KRFNGSESIKSSWNISVVKFLLEKLKQELVARSHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  402 LFANRSSIMRHFGPEDQHLWKDVTEELMSDEEDSLNEPGVWVARSPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDR 481
Cdd:pfam15394 373 LFANRSFIVRLFSPEDQHLWEGVTEELMSDEEDSLDEPGVWVARPPRFRAQQLTDLCYRLDANSKHGTKANRVYGPPSDR 452
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 157819271  482 LPSVEAQLLPPELYNPNFQEEEGGGNEKGPVspsydQPHKSSCPDLNSFIEIKVEKDE 539
Cdd:pfam15394 453 LPSAEVQLLPSHLYNPDFQELEDLQGLEETP-----HPHKGFCPDLSSFIEIKVEKDE 505
 
Name Accession Description Interval E-value
DUF4616 pfam15394
Domain of unknown function (DUF4616); This protein family is a domain of unknown function ...
2-539 0e+00

Domain of unknown function (DUF4616); This protein family is a domain of unknown function found at the C-terminal domain of the proteins. This protein family is found in eukaryotes. Proteins in this family are typically between 166 and 538 amino acids in length.


Pssm-ID: 464701  Cd Length: 505  Bit Score: 841.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271    2 SFSATILFSPPSGSEARCCCCACKSETSQGSTGSQGGNPLAGTPITVTGHGLAVQSSEQLLHIIYQRVDKAVGLAEAALG 81
Cdd:pfam15394   1 SFSATILFSPPNAKEAKCCCCTCKQEPAAQTSAPPPLPPPPSTPITVTGSGLALQSPDQLLHIIYQRVEKAASLAEVALS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271   82 LARANNELLKQLQEEVGELRQGKVCTAdedgesraRSPPPEEPGVLKGSPGEAsktvpAMEEECDSVGSGVQVVIEELRQ 161
Cdd:pfam15394  81 LAKANNEALKRLEEDVGALRRGTPPSL--------KASPPCVPEEHQEAEGEE-----EEEQEAEGFGNGVQVVIEELRQ 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  162 LGAAStVGQGPLGFfAAPQRDarlpgctlaavEGAPMLNPmAADDYAASEGSIQRVLVPAYAKQLSPATQLAIQRASSEP 241
Cdd:pfam15394 148 LGAAA-GPPGHLGF-SPVQLG-----------TGSGGLAG-ALEDYNATIPPIQRVVAPTFNPELSPPSPPVCITGLADS 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  242 GPEGGTKLPATRPEDMlGSAALDSALEESGPGGTGELSRSLGFIGSPCRIRGTGQKNSRRKRDLVLSKLVHNVHNHITND 321
Cdd:pfam15394 214 NIENSEKSVSPNPATS-ALQSLDSALDYVSPISTGEVRRSLGMPLAPLRPRSSGQKNARRKRDLVLSKLVHNVHNHVTND 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  322 KRFNGSESIKSSWNISVVKFLLEKLKQELMASPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 401
Cdd:pfam15394 293 KRFNGSESIKSSWNISVVKFLLEKLKQELVARSHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  402 LFANRSSIMRHFGPEDQHLWKDVTEELMSDEEDSLNEPGVWVARSPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDR 481
Cdd:pfam15394 373 LFANRSFIVRLFSPEDQHLWEGVTEELMSDEEDSLDEPGVWVARPPRFRAQQLTDLCYRLDANSKHGTKANRVYGPPSDR 452
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 157819271  482 LPSVEAQLLPPELYNPNFQEEEGGGNEKGPVspsydQPHKSSCPDLNSFIEIKVEKDE 539
Cdd:pfam15394 453 LPSAEVQLLPSHLYNPDFQELEDLQGLEETP-----HPHKGFCPDLSSFIEIKVEKDE 505
 
Name Accession Description Interval E-value
DUF4616 pfam15394
Domain of unknown function (DUF4616); This protein family is a domain of unknown function ...
2-539 0e+00

Domain of unknown function (DUF4616); This protein family is a domain of unknown function found at the C-terminal domain of the proteins. This protein family is found in eukaryotes. Proteins in this family are typically between 166 and 538 amino acids in length.


Pssm-ID: 464701  Cd Length: 505  Bit Score: 841.25  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271    2 SFSATILFSPPSGSEARCCCCACKSETSQGSTGSQGGNPLAGTPITVTGHGLAVQSSEQLLHIIYQRVDKAVGLAEAALG 81
Cdd:pfam15394   1 SFSATILFSPPNAKEAKCCCCTCKQEPAAQTSAPPPLPPPPSTPITVTGSGLALQSPDQLLHIIYQRVEKAASLAEVALS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271   82 LARANNELLKQLQEEVGELRQGKVCTAdedgesraRSPPPEEPGVLKGSPGEAsktvpAMEEECDSVGSGVQVVIEELRQ 161
Cdd:pfam15394  81 LAKANNEALKRLEEDVGALRRGTPPSL--------KASPPCVPEEHQEAEGEE-----EEEQEAEGFGNGVQVVIEELRQ 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  162 LGAAStVGQGPLGFfAAPQRDarlpgctlaavEGAPMLNPmAADDYAASEGSIQRVLVPAYAKQLSPATQLAIQRASSEP 241
Cdd:pfam15394 148 LGAAA-GPPGHLGF-SPVQLG-----------TGSGGLAG-ALEDYNATIPPIQRVVAPTFNPELSPPSPPVCITGLADS 213
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  242 GPEGGTKLPATRPEDMlGSAALDSALEESGPGGTGELSRSLGFIGSPCRIRGTGQKNSRRKRDLVLSKLVHNVHNHITND 321
Cdd:pfam15394 214 NIENSEKSVSPNPATS-ALQSLDSALDYVSPISTGEVRRSLGMPLAPLRPRSSGQKNARRKRDLVLSKLVHNVHNHVTND 292
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  322 KRFNGSESIKSSWNISVVKFLLEKLKQELMASPHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 401
Cdd:pfam15394 293 KRFNGSESIKSSWNISVVKFLLEKLKQELVARSHNYTDKELKGACVAYFLTKRREYRNSLNPFKGLKEKEEKKLRSRRYR 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157819271  402 LFANRSSIMRHFGPEDQHLWKDVTEELMSDEEDSLNEPGVWVARSPRFRAQRLTELCYHLDANSKHGTKANRVYGPPSDR 481
Cdd:pfam15394 373 LFANRSFIVRLFSPEDQHLWEGVTEELMSDEEDSLDEPGVWVARPPRFRAQQLTDLCYRLDANSKHGTKANRVYGPPSDR 452
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 157819271  482 LPSVEAQLLPPELYNPNFQEEEGGGNEKGPVspsydQPHKSSCPDLNSFIEIKVEKDE 539
Cdd:pfam15394 453 LPSAEVQLLPSHLYNPDFQELEDLQGLEETP-----HPHKGFCPDLSSFIEIKVEKDE 505
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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