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Conserved domains on  [gi|168480086|ref|NP_001108220|]
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transmembrane protein 240 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TMEM240 pfam15207
TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
1-173 2.27e-125

TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 54 and 175 amino acids in length. The function of this family is unknown.


:

Pssm-ID: 405814  Cd Length: 174  Bit Score: 349.65  E-value: 2.27e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086    1 MSMSANTMIFMILGASVVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHIHYVIPYDGDQSVVDASENYFVT 80
Cdd:pfam15207   1 MSMNANTMIFMILGASMVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHVHYVIPYDGDQSVVDSSENYFVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086   81 DSVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRAGRRYDGSWTWLPKLCSLRELGRRPH-RPFEEAAGNMVHVK 159
Cdd:pfam15207  81 DNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRASRRYDNSWSWLPKFCNLRELRRRAHmRQYEEATGNMVHIK 160
                         170
                  ....*....|....
gi 168480086  160 QKLYHNGHPSPRHL 173
Cdd:pfam15207 161 QKLYHNGHPSPRHL 174
 
Name Accession Description Interval E-value
TMEM240 pfam15207
TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
1-173 2.27e-125

TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 54 and 175 amino acids in length. The function of this family is unknown.


Pssm-ID: 405814  Cd Length: 174  Bit Score: 349.65  E-value: 2.27e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086    1 MSMSANTMIFMILGASVVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHIHYVIPYDGDQSVVDASENYFVT 80
Cdd:pfam15207   1 MSMNANTMIFMILGASMVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHVHYVIPYDGDQSVVDSSENYFVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086   81 DSVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRAGRRYDGSWTWLPKLCSLRELGRRPH-RPFEEAAGNMVHVK 159
Cdd:pfam15207  81 DNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRASRRYDNSWSWLPKFCNLRELRRRAHmRQYEEATGNMVHIK 160
                         170
                  ....*....|....
gi 168480086  160 QKLYHNGHPSPRHL 173
Cdd:pfam15207 161 QKLYHNGHPSPRHL 174
 
Name Accession Description Interval E-value
TMEM240 pfam15207
TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are ...
1-173 2.27e-125

TMEM240 family; This family of proteins is found in eukaryotes. Proteins in this family are typically between 54 and 175 amino acids in length. The function of this family is unknown.


Pssm-ID: 405814  Cd Length: 174  Bit Score: 349.65  E-value: 2.27e-125
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086    1 MSMSANTMIFMILGASVVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHIHYVIPYDGDQSVVDASENYFVT 80
Cdd:pfam15207   1 MSMNANTMIFMILGASMVMAIACLMDMNALLDRFHNYILPHLRGEDRVCHCNCGRHHVHYVIPYDGDQSVVDSSENYFVT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 168480086   81 DSVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRAGRRYDGSWTWLPKLCSLRELGRRPH-RPFEEAAGNMVHVK 159
Cdd:pfam15207  81 DNVTKQEIDLMLGLLLGFCISWFLVWMDGVLHCAVRAWRASRRYDNSWSWLPKFCNLRELRRRAHmRQYEEATGNMVHIK 160
                         170
                  ....*....|....
gi 168480086  160 QKLYHNGHPSPRHL 173
Cdd:pfam15207 161 QKLYHNGHPSPRHL 174
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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