NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|222537761|ref|NP_001138505|]
View 

uncharacterized protein C11orf96 [Homo sapiens]

Protein Classification

DUF4695 domain-containing protein( domain architecture ID 11239074)

DUF4695 domain-containing protein similar to Homo sapiens protein C11orf96

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4695 pfam15766
Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins ...
 15-111 6.88e-47

Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 206 amino acids in length. There is a conserved RFKTQP sequence motif.


:

Pssm-ID: 374090  Cd Length: 107  Bit Score: 146.67  E-value: 6.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222537761   15 YQAVMPHFVCLA--DEFPQPVRPAKLP-KGRGRLRRPRQSRFKTQPVTFDEIQEVEEEGVSPMEEEKAKKSFLQSLECLR 91
Cdd:pfam15766   1 FQEVMPHFLLAApsEEFPQPLAPAKAKaRGKGRLRRPRQSRFKTQPITFDEIQEVEDEGVSPEEEEKARKSFLQSLECLR 80

                          90       100
                  ....*....|....*....|
gi 222537761   92 RSTQSLSLQREQLSSCKLRN 111
Cdd:pfam15766  81 RSTQNLSLQRGWLKSCKLRK 100
 
Name Accession Description Interval E-value
DUF4695 pfam15766
Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins ...
 15-111 6.88e-47

Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 206 amino acids in length. There is a conserved RFKTQP sequence motif.


Pssm-ID: 374090  Cd Length: 107  Bit Score: 146.67  E-value: 6.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222537761   15 YQAVMPHFVCLA--DEFPQPVRPAKLP-KGRGRLRRPRQSRFKTQPVTFDEIQEVEEEGVSPMEEEKAKKSFLQSLECLR 91
Cdd:pfam15766   1 FQEVMPHFLLAApsEEFPQPLAPAKAKaRGKGRLRRPRQSRFKTQPITFDEIQEVEDEGVSPEEEEKARKSFLQSLECLR 80

                          90       100
                  ....*....|....*....|
gi 222537761   92 RSTQSLSLQREQLSSCKLRN 111
Cdd:pfam15766  81 RSTQNLSLQRGWLKSCKLRK 100
 
Name Accession Description Interval E-value
DUF4695 pfam15766
Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins ...
 15-111 6.88e-47

Domain of unknown function (DUF4695); This family of proteins is found in eukaryotes. Proteins in this family are typically between 109 and 206 amino acids in length. There is a conserved RFKTQP sequence motif.


Pssm-ID: 374090  Cd Length: 107  Bit Score: 146.67  E-value: 6.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 222537761   15 YQAVMPHFVCLA--DEFPQPVRPAKLP-KGRGRLRRPRQSRFKTQPVTFDEIQEVEEEGVSPMEEEKAKKSFLQSLECLR 91
Cdd:pfam15766   1 FQEVMPHFLLAApsEEFPQPLAPAKAKaRGKGRLRRPRQSRFKTQPITFDEIQEVEDEGVSPEEEEKARKSFLQSLECLR 80

                          90       100
                  ....*....|....*....|
gi 222537761   92 RSTQSLSLQREQLSSCKLRN 111
Cdd:pfam15766  81 RSTQNLSLQRGWLKSCKLRK 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH