|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
85-300 |
1.57e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.14 E-value: 1.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 85 TTLAGLDLSYNLLTSImPSAFSRLRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHNRLREVSISAftthSQGRAL-HV 163
Cdd:COG4886 113 TNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEEL----GNLTNLkEL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 164 DLSHNLIhrllphparASLPAP-----TIQSLNLSWNRFRAVPD-LRDLP-LRYLSLDGNPLATInpDAFMGLAGLTHLS 236
Cdd:COG4886 188 DLSNNQI---------TDLPEPlgnltNLEELDLSGNQLTDLPEpLANLTnLETLDLSNNQLTDL--PELGNLTNLEELD 256
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270483877 237 LASLQgILHLPPHGfrELPGLQVLDLSGNP--KLKWAGAEVFSGLGLLQELDLSGSSLVPLPEMLL 300
Cdd:COG4886 257 LSNNQ-LTDLPPLA--NLTNLKTLDLSNNQltDLKLKELELLLGLNSLLLLLLLLNLLELLILLLL 319
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
64-175 |
5.65e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 57.55 E-value: 5.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 64 LDLSSNRLETVNESVLAGpgYTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAALPAEIFTSSP-LSDINLSHN 142
Cdd:PLN00113 480 LDLSRNQFSGAVPRKLGS--LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPvLSQLDLSQN 557
|
90 100 110
....*....|....*....|....*....|....*.
gi 270483877 143 RLrevsiSAFTTHSQGRA---LHVDLSHNLIHRLLP 175
Cdd:PLN00113 558 QL-----SGEIPKNLGNVeslVQVNISHNHLHGSLP 588
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
208-266 |
5.81e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.76 E-value: 5.81e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 270483877 208 LRYLSLDGNPLATINPDAFMGLAGLTHLSLASLQgILHLPPHGFRELPGLQVLDLSGNP 266
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNL-LTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
60-275 |
7.06e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 41.19 E-value: 7.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 60 DTAHLDLSSNRLETVNESV-LAGPGYTTLAGL---DLSYNLLTSIMPSAFSRLR---YLESLDLSHNGLAALPAEIFT-- 130
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLqSLLQGLTKGCGLqelDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGDRGLRLLAkg 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 131 ----SSPLSDINLSHNRL-REVSISAFTTHSQGRALH-VDLSHNLI-HRLLPHPARASLPAPTIQSLNLSWNRFR----- 198
Cdd:cd00116 132 lkdlPPALEKLVLGRNRLeGASCEALAKALRANRDLKeLNLANNGIgDAGIRALAEGLKANCNLEVLDLNNNGLTdegas 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 199 ----AVPDLRDLplRYLSLDGNPL-----ATINPDAFMGLAGLTHLSLASLqgilHLPPHGFREL-------PGLQVLDL 262
Cdd:cd00116 212 alaeTLASLKSL--EVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCN----DITDDGAKDLaevlaekESLLELDL 285
|
250
....*....|...
gi 270483877 263 SGNpKLKWAGAEV 275
Cdd:cd00116 286 RGN-KFGEEGAQL 297
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
85-300 |
1.57e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 86.14 E-value: 1.57e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 85 TTLAGLDLSYNLLTSImPSAFSRLRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHNRLREVSISAftthSQGRAL-HV 163
Cdd:COG4886 113 TNLESLDLSGNQLTDL-PEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEEL----GNLTNLkEL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 164 DLSHNLIhrllphparASLPAP-----TIQSLNLSWNRFRAVPD-LRDLP-LRYLSLDGNPLATInpDAFMGLAGLTHLS 236
Cdd:COG4886 188 DLSNNQI---------TDLPEPlgnltNLEELDLSGNQLTDLPEpLANLTnLETLDLSNNQLTDL--PELGNLTNLEELD 256
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 270483877 237 LASLQgILHLPPHGfrELPGLQVLDLSGNP--KLKWAGAEVFSGLGLLQELDLSGSSLVPLPEMLL 300
Cdd:COG4886 257 LSNNQ-LTDLPPLA--NLTNLKTLDLSNNQltDLKLKELELLLGLNSLLLLLLLLNLLELLILLLL 319
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
34-311 |
1.69e-15 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 76.90 E-value: 1.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 34 LFDSFSLIRVDCSSLGPHIVPVPIPLDTAHLDLSSNRLETVNESVLAGPGYTTLAGLDLSYNLLTSIMPSAFSRLRYLES 113
Cdd:COG4886 21 LTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 114 LDLSHNglaalpAEIFTSSPLSDINLSHNRLRE--VSISAFTthsqgrAL-HVDLSHNLIHRLlpHPARASLPAptIQSL 190
Cdd:COG4886 101 LDLSGN------EELSNLTNLESLDLSGNQLTDlpEELANLT------NLkELDLSNNQLTDL--PEPLGNLTN--LKSL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 191 NLSWNRFRAVPD-LRDLP-LRYLSLDGNPLATInPDAFMGLAGLTHLSLASLQgILHLPPhGFRELPGLQVLDLSGNP-- 266
Cdd:COG4886 165 DLSNNQLTDLPEeLGNLTnLKELDLSNNQITDL-PEPLGNLTNLEELDLSGNQ-LTDLPE-PLANLTNLETLDLSNNQlt 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 270483877 267 KLKWagaevFSGLGLLQELDLSGSSLVPLPEmlLHHLPALQSVSV 311
Cdd:COG4886 242 DLPE-----LGNLTNLEELDLSNNQLTDLPP--LANLTNLKTLDL 279
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
63-268 |
8.79e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 62.64 E-value: 8.79e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 63 HLDLSSNRLETVNESvLAGPgyTTLAGLDLSYNLLTSImPSAFSRLRYLESLDLSHNGLAALPaEIFTSSPLSDINLSHN 142
Cdd:COG4886 186 ELDLSNNQITDLPEP-LGNL--TNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDLP-ELGNLTNLEELDLSNN 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 143 RLREVSISAFTTHSQgralHVDLSHNLIHRL-LPHPARASLPAPTIQSLNLSWNRFRAVPDLRDLPLRYLSLDGNPLATI 221
Cdd:COG4886 261 QLTDLPPLANLTNLK----TLDLSNNQLTDLkLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVT 336
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 270483877 222 NPDAFMGLAGLTHLSLASLQGILHLPPHGFRELPGLQVLDLSGNPKL 268
Cdd:COG4886 337 LTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLA 383
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
64-175 |
5.65e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 57.55 E-value: 5.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 64 LDLSSNRLETVNESVLAGpgYTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAALPAEIFTSSP-LSDINLSHN 142
Cdd:PLN00113 480 LDLSRNQFSGAVPRKLGS--LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPvLSQLDLSQN 557
|
90 100 110
....*....|....*....|....*....|....*.
gi 270483877 143 RLrevsiSAFTTHSQGRA---LHVDLSHNLIHRLLP 175
Cdd:PLN00113 558 QL-----SGEIPKNLGNVeslVQVNISHNHLHGSLP 588
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
208-266 |
5.81e-09 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 51.76 E-value: 5.81e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 270483877 208 LRYLSLDGNPLATINPDAFMGLAGLTHLSLASLQgILHLPPHGFRELPGLQVLDLSGNP 266
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNL-LTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
64-121 |
6.01e-08 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 49.06 E-value: 6.01e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 270483877 64 LDLSSNRLETVNESVLAGPgyTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGL 121
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGL--SNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
64-265 |
1.70e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.85 E-value: 1.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 64 LDLSSNRLETVNESVLAGPGYttLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAA-LPAEiFTSSPLSD-INLSH 141
Cdd:PLN00113 361 LDLSTNNLTGEIPEGLCSSGN--LFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGeLPSE-FTKLPLVYfLDISN 437
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 142 NRLREVSISAFTTHSQGRALhvDLSHNLIHRLLPHPARASlpapTIQSLNLSWNRFR-AVPD-LRDLP-LRYLSLDGNPL 218
Cdd:PLN00113 438 NNLQGRINSRKWDMPSLQML--SLARNKFFGGLPDSFGSK----RLENLDLSRNQFSgAVPRkLGSLSeLMQLKLSENKL 511
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 270483877 219 ATINPDAFMGLAGLTHLSLASLQGILHLPPhGFRELPGLQVLDLSGN 265
Cdd:PLN00113 512 SGEIPDELSSCKKLVSLDLSHNQLSGQIPA-SFSEMPVLSQLDLSQN 557
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
48-266 |
2.62e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 49.31 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 48 LGPHIVPVPIPLDTAHLDLSSNRLET-------------VNESVLAGPGYT---TLAGLDLSYNLLTSI---MPSAfsrl 108
Cdd:PRK15370 188 LGLTTIPACIPEQITTLILDNNELKSlpenlqgniktlyANSNQLTSIPATlpdTIQEMELSINRITELperLPSA---- 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 109 ryLESLDLSHNGLAALPAEIftSSPLSDINLSHNrlrevSISAFTTHSQGRALHVDLSHNLIHRL---LP---------H 176
Cdd:PRK15370 264 --LQSLDLFHNKISCLPENL--PEELRYLSVYDN-----SIRTLPAHLPSGITHLNVQSNSLTALpetLPpglktleagE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 177 PARASLPA---PTIQSLNLSWNRFRAVPDLRDLPLRYLSLDGNPLATInPDAFMglAGLTHLSlASLQGILHLP---PHG 250
Cdd:PRK15370 335 NALTSLPAslpPELQVLDVSKNQITVLPETLPPTITTLDVSRNALTNL-PENLP--AALQIMQ-ASRNNLVRLPeslPHF 410
|
250
....*....|....*.
gi 270483877 251 FRELPGLQVLDLSGNP 266
Cdd:PRK15370 411 RGEGPQPTRIIVEYNP 426
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
231-292 |
7.42e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 7.42e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270483877 231 GLTHLSLASlQGILHLPPHGFRELPGLQVLDLSGNpKLKWAGAEVFSGLGLLQELDLSGSSL 292
Cdd:pfam13855 2 NLRSLDLSN-NRLTSLDDGAFKGLSNLKVLDLSNN-LLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
185-239 |
9.97e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.51 E-value: 9.97e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 270483877 185 PTIQSLNLSWNRFRAVPD--LRDLP-LRYLSLDGNPLATINPDAFMGLAGLTHLSLAS 239
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDgaFKGLSnLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSG 58
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
113-338 |
1.01e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 47.38 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 113 SLDLSHNGLAALPAEIftSSPLSDINLSHNRLREVSISAFTTHSQgralhVDLSHNLIHRLLPHparasLPApTIQSLNL 192
Cdd:PRK15370 203 TLILDNNELKSLPENL--QGNIKTLYANSNQLTSIPATLPDTIQE-----MELSINRITELPER-----LPS-ALQSLDL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 193 SWNRFRAVPDlrDLP--LRYLSLDGNPLATInPDAFMglAGLTHLSLASlQGILHLP---PHGFREL------------- 254
Cdd:PRK15370 270 FHNKISCLPE--NLPeeLRYLSVYDNSIRTL-PAHLP--SGITHLNVQS-NSLTALPetlPPGLKTLeagenaltslpas 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 255 --PGLQVLDLSGN-----PKlkwagaevfSGLGLLQELDLSGSSLVPLPEmllhHLPALQSVSVGQDVQCRRLVREGAYH 327
Cdd:PRK15370 344 lpPELQVLDVSKNqitvlPE---------TLPPTITTLDVSRNALTNLPE----NLPAALQIMQASRNNLVRLPESLPHF 410
|
250
....*....|.
gi 270483877 328 RQPGSSPKVVL 338
Cdd:PRK15370 411 RGEGPQPTRII 421
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
64-299 |
1.52e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 43.68 E-value: 1.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 64 LDLSSNRL--ETVNESVLagpgYTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAA-LPAEIFTSSPLSDINLS 140
Cdd:PLN00113 145 LDLSNNMLsgEIPNDIGS----FSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGqIPRELGQMKSLKWIYLG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 141 HNRLR---EVSISAFTTHSqgralHVDLSHNlihrllphparaSLPAPTIQSLNlswnrfravpDLRDlpLRYLSLDGNP 217
Cdd:PLN00113 221 YNNLSgeiPYEIGGLTSLN-----HLDLVYN------------NLTGPIPSSLG----------NLKN--LQYLFLYQNK 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 218 LATINPDAFMGLAGLTHLSLA--SLQG-------------ILHL--------PPHGFRELPGLQVLDLSGNpklKWAGaE 274
Cdd:PLN00113 272 LSGPIPPSIFSLQKLISLDLSdnSLSGeipelviqlqnleILHLfsnnftgkIPVALTSLPRLQVLQLWSN---KFSG-E 347
|
250 260
....*....|....*....|....*....
gi 270483877 275 VFSGLGL---LQELDLSGSSLV-PLPEML 299
Cdd:PLN00113 348 IPKNLGKhnnLTVLDLSTNNLTgEIPEGL 376
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
109-170 |
2.50e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 2.50e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 270483877 109 RYLESLDLSHNGLAALPAEIFTS-SPLSDINLSHNRLREVSISAFtthSQGRAL-HVDLSHNLI 170
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGlSNLKVLDLSNNLLTTLSPGAF---SGLPSLrYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
87-247 |
3.16e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 42.53 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 87 LAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAA-LPAEIF-TSSPLSDINLSHNRLR----EVSISAFTThsqgra 160
Cdd:PLN00113 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGpIPDDIFtTSSSLRYLNLSNNNFTgsipRGSIPNLET------ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 161 lhVDLSHNLIHRLLPhparaslpaptiQSLNLSWNrfravpdlrdlpLRYLSLDGNPLATINPDAFMGLAGLTHLSLASL 240
Cdd:PLN00113 145 --LDLSNNMLSGEIP------------NDIGSFSS------------LKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASN 198
|
....*..
gi 270483877 241 QGILHLP 247
Cdd:PLN00113 199 QLVGQIP 205
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
60-275 |
7.06e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 41.19 E-value: 7.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 60 DTAHLDLSSNRLETVNESV-LAGPGYTTLAGL---DLSYNLLTSIMPSAFSRLR---YLESLDLSHNGLAALPAEIFT-- 130
Cdd:cd00116 52 SLKELCLSLNETGRIPRGLqSLLQGLTKGCGLqelDLSDNALGPDGCGVLESLLrssSLQELKLNNNGLGDRGLRLLAkg 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 131 ----SSPLSDINLSHNRL-REVSISAFTTHSQGRALH-VDLSHNLI-HRLLPHPARASLPAPTIQSLNLSWNRFR----- 198
Cdd:cd00116 132 lkdlPPALEKLVLGRNRLeGASCEALAKALRANRDLKeLNLANNGIgDAGIRALAEGLKANCNLEVLDLNNNGLTdegas 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 199 ----AVPDLRDLplRYLSLDGNPL-----ATINPDAFMGLAGLTHLSLASLqgilHLPPHGFREL-------PGLQVLDL 262
Cdd:cd00116 212 alaeTLASLKSL--EVLNLGDNNLtdagaAALASALLSPNISLLTLSLSCN----DITDDGAKDLaevlaekESLLELDL 285
|
250
....*....|...
gi 270483877 263 SGNpKLKWAGAEV 275
Cdd:cd00116 286 RGN-KFGEEGAQL 297
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
89-144 |
8.78e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 41.34 E-value: 8.78e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 270483877 89 GLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGL-AALPAEIFTSSPLSDINLSHNRL 144
Cdd:PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIrGNIPPSLGSITSLEVLDLSYNSF 478
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
63-234 |
1.01e-03 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 40.69 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 63 HLDLSSNRLETVNEsvLAGPgyTTLAGLDLSYNLLTSImpSAFSRLRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHN 142
Cdd:COG4886 232 TLDLSNNQLTDLPE--LGNL--TNLEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLL 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 143 RLREVSISAFTTHSQGRALHVDLSHNLIHRLLPHPARASLPAPTIQSLNLSWNRFRAVPDLRDLPLRYLSLDGNPLATIN 222
Cdd:COG4886 306 LLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALL 385
|
170
....*....|..
gi 270483877 223 PDAFMGLAGLTH 234
Cdd:COG4886 386 LLTLLLLLLTTT 397
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
90-215 |
1.50e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.60 E-value: 1.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 90 LDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAALPAEIFTSSPLSDINLSHNRLREVSISAFTTHSQgrALHVDLSHNL 169
Cdd:PLN00113 433 LDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSE--LMQLKLSENK 510
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 270483877 170 IHRLLPHPARAslpAPTIQSLNLSWNR--------FRAVPDLRDLPLRYLSLDG 215
Cdd:PLN00113 511 LSGEIPDELSS---CKKLVSLDLSHNQlsgqipasFSEMPVLSQLDLSQNQLSG 561
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
83-265 |
1.58e-03 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 40.60 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 83 GYTTLAGLDLSYNLLTSIMPSAFSRLRYLESLDLSHNGLAA-LPAEIFTSSPLSDINLSHNRLREvSISAFTTHSQG-RA 160
Cdd:PLN00113 234 GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGpIPPSIFSLQKLISLDLSDNSLSG-EIPELVIQLQNlEI 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270483877 161 LHVdLSHNLIHRLlphP-ARASLpaPTIQSLNLSWNRFRA-VPdlRDL----PLRYLSLDGNPLATINPDAFMGLAGLTH 234
Cdd:PLN00113 313 LHL-FSNNFTGKI---PvALTSL--PRLQVLQLWSNKFSGeIP--KNLgkhnNLTVLDLSTNNLTGEIPEGLCSSGNLFK 384
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 270483877 235 LSL--ASLQGilHLP-----------------------PHGFRELPGLQVLDLSGN 265
Cdd:PLN00113 385 LILfsNSLEG--EIPkslgacrslrrvrlqdnsfsgelPSEFTKLPLVYFLDISNN 438
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
255-308 |
2.82e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 2.82e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 270483877 255 PGLQVLDLSGNpKLKWAGAEVFSGLGLLQELDLSGSSLVPLPEMLLHHLPALQS 308
Cdd:pfam13855 1 PNLRSLDLSNN-RLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRY 53
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
134-197 |
5.84e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 34.81 E-value: 5.84e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 270483877 134 LSDINLSHNRLREVSISAFTTHSQGRALhvDLSHNLIHRLLPHpARASLPAptIQSLNLSWNRF 197
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVL--DLSNNLLTTLSPG-AFSGLPS--LRYLDLSGNRL 61
|
|
|