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Conserved domains on  [gi|301069349|ref|NP_001180269|]
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Na(+)/dicarboxylate cotransporter 3 isoform d [Homo sapiens]

Protein Classification

MFS transporter; SLC13 family permease; SLC13 family permease( domain architecture ID 11422084)

SLC13 (solute carrier 13) family permease is a sodium-coupled symporter that facilitates the transport across biological membranes of various ions including sulfate or Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate; SLC13 (solute carrier 13) family permease is a sodium-coupled symporter that facilitates the transport across biological membranes of various ions including sulfate or Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate; may function as a regulator; major facilitator superfamily (MFS) transporter facilitates the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Gene Ontology:  GO:0016020|GO:0006811
PubMed:  23177988
TCDB:  2.A.47

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
47-484 4.84e-84

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


:

Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 264.71  E-value: 4.84e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  47 LSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLfgqkevrkdps 126
Cdd:COG0471    1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIAAAL----------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 127 qeseentaavrrnglhtvptemqflasteakdhpgetevpldlpadsrkEDEYRRNIWKGFLISIPYSASIGGTATLTGT 206
Cdd:COG0471   70 -------------------------------------------------GSEKRSKFGSALLLPIAFAASIGGMGTLIGT 100
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 207 APNLILLGQLKSFFPQcdVVNFGSWFIFAFPLMLLFLLAGWLWISFLYgglsfrgwRKNKSEIrtnaeDRARAVIREEYQ 286
Cdd:COG0471  101 PPNLIAAGLLEEATGI--PISFFEWMLVGLPVALVGLLLLWLVLYRLL--------PPEIKEV-----PGSKEVIREELA 165
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 287 NLGPIKF-----------------------LSDAVTGVAIVTILFFFPsqrpslkwwfdfkapntetepLLTWKKAQETV 343
Cdd:COG0471  166 ELGPLSRrekialaifaltvllwitgslhgIPIAVVALLGAVLLLLTG---------------------VLTWKDAYKSI 224
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 344 PWNIILLLGGGFAMAKGCEESGLSVWIGGQL-HPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRV 422
Cdd:COG0471  225 PWGVLLLFGGGLALGAALEKTGLAAWLADALlPLLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQALGV 304
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301069349 423 HPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTW 484
Cdd:COG0471  305 NPLPLALAVAFAASCAFLLPVGTPPNAIVYGSGYYKFKDFLKVGLPLNLIGLVVLLLLGPLW 366
 
Name Accession Description Interval E-value
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
47-484 4.84e-84

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 264.71  E-value: 4.84e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  47 LSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLfgqkevrkdps 126
Cdd:COG0471    1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIAAAL----------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 127 qeseentaavrrnglhtvptemqflasteakdhpgetevpldlpadsrkEDEYRRNIWKGFLISIPYSASIGGTATLTGT 206
Cdd:COG0471   70 -------------------------------------------------GSEKRSKFGSALLLPIAFAASIGGMGTLIGT 100
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 207 APNLILLGQLKSFFPQcdVVNFGSWFIFAFPLMLLFLLAGWLWISFLYgglsfrgwRKNKSEIrtnaeDRARAVIREEYQ 286
Cdd:COG0471  101 PPNLIAAGLLEEATGI--PISFFEWMLVGLPVALVGLLLLWLVLYRLL--------PPEIKEV-----PGSKEVIREELA 165
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 287 NLGPIKF-----------------------LSDAVTGVAIVTILFFFPsqrpslkwwfdfkapntetepLLTWKKAQETV 343
Cdd:COG0471  166 ELGPLSRrekialaifaltvllwitgslhgIPIAVVALLGAVLLLLTG---------------------VLTWKDAYKSI 224
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 344 PWNIILLLGGGFAMAKGCEESGLSVWIGGQL-HPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRV 422
Cdd:COG0471  225 PWGVLLLFGGGLALGAALEKTGLAAWLADALlPLLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQALGV 304
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301069349 423 HPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTW 484
Cdd:COG0471  305 NPLPLALAVAFAASCAFLLPVGTPPNAIVYGSGYYKFKDFLKVGLPLNLIGLVVLLLLGPLW 366
SLC13_permease cd01115
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ...
1-476 6.04e-74

Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.


Pssm-ID: 238535 [Multi-domain]  Cd Length: 382  Bit Score: 239.02  E-value: 6.04e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   1 MAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARL 80
Cdd:cd01115    7 AAVLFVTEALPLDVTALLVPVLLVLLGVVPPKEAFSGFSDPAVILFLAGFILGAALTRTGLAKRIATKLLKRAGKGERRL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  81 ILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLfgqkevrkdpsqeseentaavrrnglhtvPTEMQFLasteakdhp 160
Cdd:cd01115   87 LLLLMLVTAFLSAFMSNTATVAIMLPVALGLAAKL-----------------------------DISPSRL--------- 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 161 getevpldlpadsrkedeyrrniwkgfLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFIFAFPLML 240
Cdd:cd01115  129 ---------------------------LMPLAFAASIGGMLTLIGTPPNLVASGYLESLGGQ--GFSFFEFTPIGLPLLI 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 241 LFLLAGWLWISFLYGGLSFRGWrknkseIRTNAEdraravireeyqnlgpIKFLSDAVTGVAIVTILFFFPsqrpslkww 320
Cdd:cd01115  180 IGLLYLWFIFRLAVLIITIVLL------AALAAI----------------TGLLPVSVAIAIGAIVLVFGG--------- 228
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 321 fdfkapntetepLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHP-LENVPPALAVLLITVVIAFFTEF 399
Cdd:cd01115  229 ------------VLLTKEDYKSIDWGIIFLFAGGIPLGKALESSGAAALIAEALISlLGGLPPFAILLLLCLLTLVLTNF 296
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 301069349 400 ASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLL 476
Cdd:cd01115  297 ISNTATAVLLAPIALSIALSLGLPPEALLLAVAIGASCAFMLPVGTPPNAIVLGPGGYKFSDFAKVGLPLSILSLVV 373
Na_sulph_symp pfam00939
Sodium:sulfate symporter transmembrane region; There are also some members in this family that ...
1-484 9.84e-61

Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.


Pssm-ID: 279307 [Multi-domain]  Cd Length: 472  Bit Score: 206.84  E-value: 9.84e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349    1 MAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQ----YFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQ 76
Cdd:pfam00939  40 TIVGWILEPLPMAVIALFAISLSAILIGTLLAKALSWalsgFSSTTTWLVFGAFFISAAFEKTGLGRRIALVLVKKMGKR 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   77 ParLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSL---FGqkevrkdpsqeseentaavrrnglhtvptemqflas 153
Cdd:pfam00939 120 T--LGLGYGLVFSDLLLAPATPSNTARAGGIVFPIIMSLppaFG------------------------------------ 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  154 teakdhpgetevpldlpadSRKEDEYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFI 233
Cdd:pfam00939 162 -------------------SDPEKGSERRIGAYLMWTVYQSTSITSAMFLTAMAPNLLLLGLMNSILGV--TITWASWFL 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  234 FAFPLMLLFLLAGWLWISFLYGGLSFRGwrknkseirtnaeDRARAVIREEYQNLGPIKFLSDAVTGVAIVTILFffpsq 313
Cdd:pfam00939 221 AAIPPGVILLLLAPLLLYVLYPPEIKSV-------------PDAKAIAKTELKELGPMTFREKALLGLFVLLLLL----- 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  314 rpslkwWFDFKAPNTETE-------------PLLTWKKA-QETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPL-- 377
Cdd:pfam00939 283 ------WIFGGSLNIDATtvaiiglalmlllRILDWKDIvKNKGAWNTLIWLGGLIMLANGLERSGFIEWLGNTLSTSls 356
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  378 ENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHP-LYLMIPGTVGCSFA-FMLPVSTPPNSIAFASG 455
Cdd:pfam00939 357 GFSPAMAFIIILSLFYLSHYLFASATAHTAAMLPIFAAVAQAIPGAPpLLAALLLGFAISLGgFLTPYGTGPGPIYFGSG 436
                         490       500
                  ....*....|....*....|....*....
gi 301069349  456 HLLVKDMVRTGLLMNLMGVLLLSLAMNTW 484
Cdd:pfam00939 437 YLKVKDWWRIGAILTIIGLLILLLLGNWW 465
dass TIGR00785
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ...
1-485 3.01e-53

anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273267 [Multi-domain]  Cd Length: 444  Bit Score: 186.40  E-value: 3.01e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349    1 MAVYWCTEALPLSVTALLPI-VLFPFMGIL--PSNKVCPQYFLD-TNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQ 76
Cdd:TIGR00785  20 AIVGWILEPLPLPVTALLAIpIIAVLLGVLsaFKFKNALSGFADpTIWLFFGAFILATALVKTGLGKRIAYKLVGKMGGT 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   77 PARL-ILGMMVTTSFLSMWLSNTA-STAMMLPIANAILkslfgqkevrkdpsqeseentaavrrnglhtvptemqflast 154
Cdd:TIGR00785 100 TLGLgYFLVFLETLLAPMWPSNTArAGGILLPIIKSLL------------------------------------------ 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  155 eakdhpgetevpldlPADSRKEDEYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFIF 234
Cdd:TIGR00785 138 ---------------PLLGSKPEKSPRKIGKYLMLGIAYSASIGSSGFLTGSAPNALAAGILSKILGI--QISWGDWFLA 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  235 AFPLMLLFLLAGWLWISFLYgglsfrgwrknKSEIRTNaeDRARAVIREEYQNLGPIKFLSDAVTGVAIVTILFFFPSQr 314
Cdd:TIGR00785 201 GLPLGIILLLLVPLLLYVLF-----------PPELKLK--DEVDLWAKEELEEMGPMSFREKALLGIFLLALLLWIFGG- 266
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  315 pslkwwfdFKAPNTETEPLL-----------TWKKAQE-TVPWNIILLLGGGFAMAKGCEESGLSVWIGGQL-HPLENVP 381
Cdd:TIGR00785 267 --------SLGINASVVALLavvlmlflgivTWKDIQKnKVAWNTLILFGGLIGLAGGLKKSGFIKWFSEKLvGILDGLS 338
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  382 PALAVLLITVVIAFF-TEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFA-FMLPVSTPPNSIAFASGHLLV 459
Cdd:TIGR00785 339 PTIAVLVLVVLFYIIlYFFASNTAHTAALVPIFFSVASAQGIPLELLALALALSASLMgFLTPYATPPNAIAYGSGYVKI 418
                         490       500
                  ....*....|....*....|....*.
gi 301069349  460 KDMVRTGLLMNLMGVLLLSLAMNTWA 485
Cdd:TIGR00785 419 KDMWRVGAIIGIVGLIVLLLVGTLWW 444
 
Name Accession Description Interval E-value
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
47-484 4.84e-84

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 264.71  E-value: 4.84e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  47 LSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLfgqkevrkdps 126
Cdd:COG0471    1 LGGFVLAAALEKTGLGRRIALLLLKRFGGSPLRLLLGLMLATALLSAFISNTARAAMMLPIALSIAAAL----------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 127 qeseentaavrrnglhtvptemqflasteakdhpgetevpldlpadsrkEDEYRRNIWKGFLISIPYSASIGGTATLTGT 206
Cdd:COG0471   70 -------------------------------------------------GSEKRSKFGSALLLPIAFAASIGGMGTLIGT 100
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 207 APNLILLGQLKSFFPQcdVVNFGSWFIFAFPLMLLFLLAGWLWISFLYgglsfrgwRKNKSEIrtnaeDRARAVIREEYQ 286
Cdd:COG0471  101 PPNLIAAGLLEEATGI--PISFFEWMLVGLPVALVGLLLLWLVLYRLL--------PPEIKEV-----PGSKEVIREELA 165
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 287 NLGPIKF-----------------------LSDAVTGVAIVTILFFFPsqrpslkwwfdfkapntetepLLTWKKAQETV 343
Cdd:COG0471  166 ELGPLSRrekialaifaltvllwitgslhgIPIAVVALLGAVLLLLTG---------------------VLTWKDAYKSI 224
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 344 PWNIILLLGGGFAMAKGCEESGLSVWIGGQL-HPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRV 422
Cdd:COG0471  225 PWGVLLLFGGGLALGAALEKTGLAAWLADALlPLLGGLSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQALGV 304
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301069349 423 HPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTW 484
Cdd:COG0471  305 NPLPLALAVAFAASCAFLLPVGTPPNAIVYGSGYYKFKDFLKVGLPLNLIGLVVLLLLGPLW 366
SLC13_permease cd01115
Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been ...
1-476 6.04e-74

Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is related to renal and intestinal Na+/sulfate cotransporters and a few putative bacterial permeases. The SLC13-type proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium and various anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease is composed of 8-13 transmembrane helices.


Pssm-ID: 238535 [Multi-domain]  Cd Length: 382  Bit Score: 239.02  E-value: 6.04e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   1 MAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARL 80
Cdd:cd01115    7 AAVLFVTEALPLDVTALLVPVLLVLLGVVPPKEAFSGFSDPAVILFLAGFILGAALTRTGLAKRIATKLLKRAGKGERRL 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  81 ILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSLfgqkevrkdpsqeseentaavrrnglhtvPTEMQFLasteakdhp 160
Cdd:cd01115   87 LLLLMLVTAFLSAFMSNTATVAIMLPVALGLAAKL-----------------------------DISPSRL--------- 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 161 getevpldlpadsrkedeyrrniwkgfLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFIFAFPLML 240
Cdd:cd01115  129 ---------------------------LMPLAFAASIGGMLTLIGTPPNLVASGYLESLGGQ--GFSFFEFTPIGLPLLI 179
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 241 LFLLAGWLWISFLYGGLSFRGWrknkseIRTNAEdraravireeyqnlgpIKFLSDAVTGVAIVTILFFFPsqrpslkww 320
Cdd:cd01115  180 IGLLYLWFIFRLAVLIITIVLL------AALAAI----------------TGLLPVSVAIAIGAIVLVFGG--------- 228
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 321 fdfkapntetepLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHP-LENVPPALAVLLITVVIAFFTEF 399
Cdd:cd01115  229 ------------VLLTKEDYKSIDWGIIFLFAGGIPLGKALESSGAAALIAEALISlLGGLPPFAILLLLCLLTLVLTNF 296
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 301069349 400 ASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLL 476
Cdd:cd01115  297 ISNTATAVLLAPIALSIALSLGLPPEALLLAVAIGASCAFMLPVGTPPNAIVLGPGGYKFSDFAKVGLPLSILSLVV 373
Na_sulph_symp pfam00939
Sodium:sulfate symporter transmembrane region; There are also some members in this family that ...
1-484 9.84e-61

Sodium:sulfate symporter transmembrane region; There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.


Pssm-ID: 279307 [Multi-domain]  Cd Length: 472  Bit Score: 206.84  E-value: 9.84e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349    1 MAVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQ----YFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQ 76
Cdd:pfam00939  40 TIVGWILEPLPMAVIALFAISLSAILIGTLLAKALSWalsgFSSTTTWLVFGAFFISAAFEKTGLGRRIALVLVKKMGKR 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   77 ParLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSL---FGqkevrkdpsqeseentaavrrnglhtvptemqflas 153
Cdd:pfam00939 120 T--LGLGYGLVFSDLLLAPATPSNTARAGGIVFPIIMSLppaFG------------------------------------ 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  154 teakdhpgetevpldlpadSRKEDEYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFI 233
Cdd:pfam00939 162 -------------------SDPEKGSERRIGAYLMWTVYQSTSITSAMFLTAMAPNLLLLGLMNSILGV--TITWASWFL 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  234 FAFPLMLLFLLAGWLWISFLYGGLSFRGwrknkseirtnaeDRARAVIREEYQNLGPIKFLSDAVTGVAIVTILFffpsq 313
Cdd:pfam00939 221 AAIPPGVILLLLAPLLLYVLYPPEIKSV-------------PDAKAIAKTELKELGPMTFREKALLGLFVLLLLL----- 282
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  314 rpslkwWFDFKAPNTETE-------------PLLTWKKA-QETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPL-- 377
Cdd:pfam00939 283 ------WIFGGSLNIDATtvaiiglalmlllRILDWKDIvKNKGAWNTLIWLGGLIMLANGLERSGFIEWLGNTLSTSls 356
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  378 ENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHP-LYLMIPGTVGCSFA-FMLPVSTPPNSIAFASG 455
Cdd:pfam00939 357 GFSPAMAFIIILSLFYLSHYLFASATAHTAAMLPIFAAVAQAIPGAPpLLAALLLGFAISLGgFLTPYGTGPGPIYFGSG 436
                         490       500
                  ....*....|....*....|....*....
gi 301069349  456 HLLVKDMVRTGLLMNLMGVLLLSLAMNTW 484
Cdd:pfam00939 437 YLKVKDWWRIGAILTIIGLLILLLLGNWW 465
dass TIGR00785
anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally ...
1-485 3.01e-53

anion transporter; The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273267 [Multi-domain]  Cd Length: 444  Bit Score: 186.40  E-value: 3.01e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349    1 MAVYWCTEALPLSVTALLPI-VLFPFMGIL--PSNKVCPQYFLD-TNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQ 76
Cdd:TIGR00785  20 AIVGWILEPLPLPVTALLAIpIIAVLLGVLsaFKFKNALSGFADpTIWLFFGAFILATALVKTGLGKRIAYKLVGKMGGT 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   77 PARL-ILGMMVTTSFLSMWLSNTA-STAMMLPIANAILkslfgqkevrkdpsqeseentaavrrnglhtvptemqflast 154
Cdd:TIGR00785 100 TLGLgYFLVFLETLLAPMWPSNTArAGGILLPIIKSLL------------------------------------------ 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  155 eakdhpgetevpldlPADSRKEDEYRRNIWKGFLISIPYSASIGGTATLTGTAPNLILLGQLKSFFPQcdVVNFGSWFIF 234
Cdd:TIGR00785 138 ---------------PLLGSKPEKSPRKIGKYLMLGIAYSASIGSSGFLTGSAPNALAAGILSKILGI--QISWGDWFLA 200
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  235 AFPLMLLFLLAGWLWISFLYgglsfrgwrknKSEIRTNaeDRARAVIREEYQNLGPIKFLSDAVTGVAIVTILFFFPSQr 314
Cdd:TIGR00785 201 GLPLGIILLLLVPLLLYVLF-----------PPELKLK--DEVDLWAKEELEEMGPMSFREKALLGIFLLALLLWIFGG- 266
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  315 pslkwwfdFKAPNTETEPLL-----------TWKKAQE-TVPWNIILLLGGGFAMAKGCEESGLSVWIGGQL-HPLENVP 381
Cdd:TIGR00785 267 --------SLGINASVVALLavvlmlflgivTWKDIQKnKVAWNTLILFGGLIGLAGGLKKSGFIKWFSEKLvGILDGLS 338
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  382 PALAVLLITVVIAFF-TEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFA-FMLPVSTPPNSIAFASGHLLV 459
Cdd:TIGR00785 339 PTIAVLVLVVLFYIIlYFFASNTAHTAALVPIFFSVASAQGIPLELLALALALSASLMgFLTPYATPPNAIAYGSGYVKI 418
                         490       500
                  ....*....|....*....|....*.
gi 301069349  460 KDMVRTGLLMNLMGVLLLSLAMNTWA 485
Cdd:TIGR00785 419 KDMWRVGAIIGIVGLIVLLLVGTLWW 444
ArsB_NhaD_permease cd00625
Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, ...
2-481 5.10e-43

Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump.


Pssm-ID: 238344 [Multi-domain]  Cd Length: 396  Bit Score: 157.41  E-value: 5.10e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   2 AVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKIlMLVGVQPARLI 81
Cdd:cd00625    1 YVLIRPEKLPRAVVALLGAVLLVLLGVVSPKEALSAIDWETILLLFGMMILSAALEETGLFDRLAAKL-ARASKGSRRLL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  82 LGMMVTTSFLSMWLSNTASTAMMLPIANAILKslfgqkevrkdpsqeseentaavRRNGLHTVPtemqflasteakdhpg 161
Cdd:cd00625   80 LLLMLLTAALSAFFSNDATAVLLTPIVLALLR-----------------------KLGLSPPVP---------------- 120
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 162 etevpldlpadsrkedeyrrniwkgFLISIPYSASIGGTATLTGTAPNLILLGQLKsffpqcdvVNFGSWFIFAFPLMLL 241
Cdd:cd00625  121 -------------------------LLLALAFAANIGGAATPIGNPPNLIIASLSG--------LGFLDFLAFMAPPALG 167
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 242 FLLAGWLWISFLYGGlsfrgwrknksEIRTNAEDRARAVIREEYQNLGPIKFLSDAVTGVAIVTILFFFpsqRPSLKWWF 321
Cdd:cd00625  168 LLLLLLGLLYLLFRK-----------KLLLPDEDKLTVLAEPLPARPLLKKFLLLALLLLLLFVLLFFF---LIPLGLIA 233
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 322 D--FKAPNTETEPLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEF 399
Cdd:cd00625  234 LlgALLLLLLLVRGLDPEEVLKSVDWGTLLFFAGLFVLVGALESTGLLEWLAELLVALVGLPPLAALLLIGLLSALLSNF 313
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 400 ASNTATIIIFLPVLAEL-----AIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAfasgHLLVKDMVRTGLLMNLMgV 474
Cdd:cd00625  314 ISNVPTVALLLPIAASLappepAWLALALGSTLGGNLTLIGSLANLIPLGAAENAGV----GISFGEFLKVGLPLTLL-S 388

                 ....*..
gi 301069349 475 LLLSLAM 481
Cdd:cd00625  389 LVVSLLY 395
CitMHS pfam03600
Citrate transporter;
2-417 5.85e-36

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 136.67  E-value: 5.85e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349    2 AVYWCTEALPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARLI 81
Cdd:pfam03600   1 YVLIITEKLPRDVVALLGAVLLVLLGVLTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGKPRRLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   82 LGMMVTTSFLSMWLSNTASTAMMLPIANAIlkslfgqkevrkdpsqeseentaaVRRNGLHTVPtemqflasteakdhpg 161
Cdd:pfam03600  81 VALMLATALLSAFLSNDGTVLIMIPIVLAL------------------------ARRLGLPPSP---------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  162 etevpldlpadsrkedeyrrniwkgFLISIPYSASIGGTATLTGTAPNLILLGQLKsffpqcdvVNFGSWFIFAFPLMLL 241
Cdd:pfam03600 121 -------------------------LLIALAFAANIGGTATPIGDPPNIIIASALG--------LSFGDFGFFMFPPVGV 167
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  242 FLLAGWLWISFLYGGLSFRGWRKNKSEIRTNAEDRARAvireeyqnlgpiKFLSDAVTGVAIVTILFFFPSQRPSLKWwf 321
Cdd:pfam03600 168 ALLLVGLLPLLLIFRKLLPVRKEEEAELEELRKRAIKD------------KLLLAISALVLALVILGFLLLSVLALAG-- 233
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  322 dfkAPNTETEPLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLenVPPALAVLLITVVIAFFTEFAS 401
Cdd:pfam03600 234 ---ALLLLLTGVLDPEEALKAVDWSTLLFFAGLFILVGALEKTGLADALADALGGL--SGLLVALALILWLSALLSAFIS 308
                         410
                  ....*....|....*.
gi 301069349  402 NTATIIIFLPVLAELA 417
Cdd:pfam03600 309 NVPTAALMAPIIVGMA 324
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
10-429 2.72e-12

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 68.62  E-value: 2.72e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  10 LPLSVTALLPIVLFPFMGILPSNKVCPQYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTS 89
Cdd:COG1055   23 LNRAVAALLGAALLLLLGVVSLEDALEAIDWNTILFLLGMMIIVAILDESGFFEWLAIKLARRAKGSPRRLLWLLGLLTA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  90 FLSMWLSNTASTAMMLPIANAIlkslfgqkevrkdpsqeseentaaVRRNGLHTVPtemqflasteakdhpgetevpldl 169
Cdd:COG1055  103 LLSAFLDNDTTALLLTPVVLAI------------------------ARRLGLNPVP------------------------ 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 170 padsrkedeyrrniwkgFLISIPYSASIGGTATLTGTAPNLILLGQLKsffpqcdvVNFGSWFIFAFPLMLLFLLAGWLW 249
Cdd:COG1055  135 -----------------FLIAIVFAANIGGAATPIGNPTNIMIASAGG--------LSFLDFLANLFPPSLVSLLVTLLV 189
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 250 ISFLYGGlSFRGWRKNKSEIRTNAEDRARAVIreeyqnlgpikflsdAVTGVAIVTILFFFPSQ---RPS---------L 317
Cdd:COG1055  190 LYLLFRK-ELPAAPDLEDDPKEAIKDRRLLRI---------------SLLVLALLLVGFVLHSFlglPPAliallgaavL 253
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 318 KWWFDFKApnteteplltwKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFT 397
Cdd:COG1055  254 LLLARVDV-----------REVLKKVDWSTLLFFIGLFVVVGGLENTGLLDLLAELLASLTGGNLLLAALLILWLSAILS 322
                        410       420       430
                 ....*....|....*....|....*....|..
gi 301069349 398 EFASNTATIIIFLPVLAELAIRLRVHPLYLMI 429
Cdd:COG1055  323 AVVDNVPLVAALLPLIPDLGATGNPEPLWLAL 354
CitMHS pfam03600
Citrate transporter;
332-481 1.73e-10

Citrate transporter;


Pssm-ID: 460985 [Multi-domain]  Cd Length: 342  Bit Score: 62.33  E-value: 1.73e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  332 PLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLP 411
Cdd:pfam03600  26 GVLTPEEALSGIDSPTILLLLGMMIIGAILERTGLFDRLALKLLRLAGGKPRRLLVALMLATALLSAFLSNDGTVLIMIP 105
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 301069349  412 VLAELAIRLRVHPLYLMIPGTVGCSFAFML-PVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAM 481
Cdd:pfam03600 106 IVLALARRLGLPPSPLLIALAFAANIGGTAtPIGDPPNIIIASALGLSFGDFGFFMFPPVGVALLLVGLLP 176
P_permease cd01116
Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible ...
37-438 9.63e-10

Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.


Pssm-ID: 238536 [Multi-domain]  Cd Length: 413  Bit Score: 60.73  E-value: 9.63e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349  37 QYFLDTNFLFLSGLIMASAIEEWNLHRRIALKILMLVGVQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAIlkslf 116
Cdd:cd01116   44 WVDWETLALLLGMMIIVSILSETGVFEYLAIWAVKISKGRPWRLLLLLGLLTAFLSAFLDNVTTVLLMVPVTIRL----- 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 117 gqkevrkdpsqeseentaaVRRNGLHTVPtemqflasteakdhpgetevpldlpadsrkedeyrrniwkgFLISIPYSAS 196
Cdd:cd01116  119 -------------------CEVLGLNPVP-----------------------------------------VLISEVIAAN 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 197 IGGTATLTGTAPNLILlgqlksffPQCDVVNFGSWFIFAFPLMLLFLLAGWLWISFLYGglsfRGWRKNKSEIRTNAEDR 276
Cdd:cd01116  139 IGGAATLIGDPPNIMI--------GSAAGLTFNDFLLHMLPSVVLALVVTFILLYFLYR----NILKAREEDVLALAELE 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 277 ARAVIReeyqNLGPIKFLSDAVTGVAIVTILFFFPSQRPS-------LKWWFDFKAPNTEteplltwkKAQETVPWNIIL 349
Cdd:cd01116  207 PKYPIK----DKVLLLKSLTILTLVIIGFVLHSPLGVSLGwiallgaLLLLLLADKLDFE--------DVLSRVEWDTLL 274
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 350 LLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMI 429
Cdd:cd01116  275 FFAGLFVLVGGLEELGIIEWIAELLVGVILGRIAVAVILILWISALLSAFIDNIPVTATMIPIVKDLASQLGIPLLPLWW 354

                 ....*....
gi 301069349 430 PGTVGCSFA 438
Cdd:cd01116  355 ALALGACLG 363
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
333-457 2.76e-08

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 55.90  E-value: 2.76e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 333 LLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPV 412
Cdd:COG1055   41 VVSLEDALEAIDWNTILFLLGMMIIVAILDESGFFEWLAIKLARRAKGSPRRLLWLLGLLTALLSAFLDNDTTALLLTPV 120
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 301069349 413 LAELAIRLRVHPLYLMIpgtvGCSFA-----FMLPVSTPPNSIAFASGHL 457
Cdd:COG1055  121 VLAIARRLGLNPVPFLI----AIVFAaniggAATPIGNPTNIMIASAGGL 166
CitT COG0471
Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];
1-115 4.23e-06

Di- and tricarboxylate antiporter [Carbohydrate transport and metabolism];


Pssm-ID: 440239 [Multi-domain]  Cd Length: 369  Bit Score: 49.00  E-value: 4.23e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349   1 MAVYWCTEA---LPLSVTALLPIVLFPFMGILPSNKVcpQYFLDTNFLFL--SGLIMASAIEEWNLHRRIALKIL-MLVG 74
Cdd:COG0471  184 TVLLWITGSlhgIPIAVVALLGAVLLLLTGVLTWKDA--YKSIPWGVLLLfgGGLALGAALEKTGLAAWLADALLpLLGG 261
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 301069349  75 VQPARLILGMMVTTSFLSMWLSNTASTAMMLPIANAILKSL 115
Cdd:COG0471  262 LSPLLLLLLLALLTLLLTEFASNTATAALLLPIAISLAQAL 302
ArsB COG1055
Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];
193-254 1.47e-04

Na+/H+ antiporter NhaD or related arsenite permease [Inorganic ion transport and metabolism];


Pssm-ID: 440675 [Multi-domain]  Cd Length: 415  Bit Score: 44.35  E-value: 1.47e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 301069349 193 YSASIGGTATLTGTAPNLILLGQLKSffpQCDVVNFGSWFIFAFPLMLLFLLAGWLWISFLY 254
Cdd:COG1055  356 LGATLGGNLTPIGSAANVIVLGIAEK---KGIKISFGEFLKVGLPLTLLTLLIALLYLLLLY 414
ArsB_permease cd01118
Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in ...
345-457 1.66e-03

Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.


Pssm-ID: 238538 [Multi-domain]  Cd Length: 416  Bit Score: 40.71  E-value: 1.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 301069349 345 WNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHP 424
Cdd:cd01118   52 WDVTLTLIGVILLSLLLDEEGFFEWVAALAARWARGSGRKLFTLIVLLGAAVTAFFANDGTALILTPIVIALLRALGAKK 131
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 301069349 425 L----YLMIPGTVGCSFAFMLPVSTPPNSIAFASGHL 457
Cdd:cd01118  132 NrtlpFLYACAFIADAASLPLPISNLVNIVTAGYFGI 168
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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