PEX5-related protein isoform 7 [Homo sapiens]
tetratricopeptide repeat protein( domain architecture ID 1000094)
tetratricopeptide repeat (TPR) protein may adopt a right-handed helical structure with an amphipathic channel and may function as an interaction scaffold in the formation of multi-protein complexes
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
PEP_TPR_lipo super family | cl37187 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
223-453 | 1.93e-11 | ||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. The actual alignment was detected with superfamily member TIGR02917: Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 1.93e-11
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Name | Accession | Description | Interval | E-value | |||||
PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
223-453 | 1.93e-11 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 1.93e-11
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
158-431 | 8.92e-09 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 56.78 E-value: 8.92e-09
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
401-466 | 4.75e-05 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 41.60 E-value: 4.75e-05
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PRK11189 | PRK11189 | lipoprotein NlpI; Provisional |
372-421 | 1.38e-03 | |||||
lipoprotein NlpI; Provisional Pssm-ID: 236875 [Multi-domain] Cd Length: 296 Bit Score: 40.64 E-value: 1.38e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
252-285 | 8.82e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 33.96 E-value: 8.82e-03
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Name | Accession | Description | Interval | E-value | |||||
PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
223-453 | 1.93e-11 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 66.65 E-value: 1.93e-11
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
220-440 | 2.36e-10 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 63.18 E-value: 2.36e-10
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
229-466 | 1.56e-09 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 60.48 E-value: 1.56e-09
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
225-463 | 8.68e-09 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 58.17 E-value: 8.68e-09
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
158-431 | 8.92e-09 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 56.78 E-value: 8.92e-09
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
332-466 | 2.66e-08 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 227343 [Multi-domain] Cd Length: 257 Bit Score: 54.75 E-value: 2.66e-08
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
247-431 | 1.86e-06 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 50.85 E-value: 1.86e-06
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
200-466 | 2.16e-06 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 49.46 E-value: 2.16e-06
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YfgC | COG4783 | Putative Zn-dependent protease, contains TPR repeats [General function prediction only]; |
318-469 | 6.65e-06 | |||||
Putative Zn-dependent protease, contains TPR repeats [General function prediction only]; Pssm-ID: 227122 [Multi-domain] Cd Length: 484 Bit Score: 48.55 E-value: 6.65e-06
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PEP_TPR_lipo | TIGR02917 | putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly ... |
247-419 | 4.27e-05 | |||||
putative PEP-CTERM system TPR-repeat lipoprotein; This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. Pssm-ID: 274350 [Multi-domain] Cd Length: 899 Bit Score: 46.23 E-value: 4.27e-05
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
401-466 | 4.75e-05 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 41.60 E-value: 4.75e-05
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
346-467 | 7.39e-05 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 223533 [Multi-domain] Cd Length: 291 Bit Score: 44.84 E-value: 7.39e-05
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3a0801s09 | TIGR00990 | mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) ... |
372-474 | 1.10e-04 | |||||
mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70); [Transport and binding proteins, Amino acids, peptides and amines] Pssm-ID: 273380 [Multi-domain] Cd Length: 615 Bit Score: 44.97 E-value: 1.10e-04
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NrfG | COG4235 | Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
238-317 | 2.35e-04 | |||||
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 226687 [Multi-domain] Cd Length: 287 Bit Score: 43.13 E-value: 2.35e-04
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
241-305 | 5.08e-04 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 227343 [Multi-domain] Cd Length: 257 Bit Score: 42.04 E-value: 5.08e-04
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TPR_1 | pfam00515 | Tetratricopeptide repeat; |
403-433 | 8.12e-04 | |||||
Tetratricopeptide repeat; Pssm-ID: 425728 [Multi-domain] Cd Length: 34 Bit Score: 37.02 E-value: 8.12e-04
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PRK11189 | PRK11189 | lipoprotein NlpI; Provisional |
372-421 | 1.38e-03 | |||||
lipoprotein NlpI; Provisional Pssm-ID: 236875 [Multi-domain] Cd Length: 296 Bit Score: 40.64 E-value: 1.38e-03
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TPR_16 | pfam13432 | Tetratricopeptide repeat; This family is found predominantly at the C-terminus of ... |
380-432 | 3.77e-03 | |||||
Tetratricopeptide repeat; This family is found predominantly at the C-terminus of transglutaminase enzyme core regions. Pssm-ID: 433202 [Multi-domain] Cd Length: 68 Bit Score: 36.16 E-value: 3.77e-03
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TPR_1 | pfam00515 | Tetratricopeptide repeat; |
252-285 | 4.37e-03 | |||||
Tetratricopeptide repeat; Pssm-ID: 425728 [Multi-domain] Cd Length: 34 Bit Score: 34.71 E-value: 4.37e-03
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TPR_12 | pfam13424 | Tetratricopeptide repeat; |
368-429 | 7.81e-03 | |||||
Tetratricopeptide repeat; Pssm-ID: 315987 [Multi-domain] Cd Length: 77 Bit Score: 35.44 E-value: 7.81e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
252-285 | 8.82e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 33.96 E-value: 8.82e-03
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TPR | smart00028 | Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum ... |
403-433 | 9.73e-03 | |||||
Tetratricopeptide repeats; Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism. Pssm-ID: 197478 [Multi-domain] Cd Length: 34 Bit Score: 33.96 E-value: 9.73e-03
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Blast search parameters | ||||
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