|
Name |
Accession |
Description |
Interval |
E-value |
| Sfi1 |
pfam08457 |
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ... |
335-747 |
5.00e-09 |
|
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.
Pssm-ID: 430007 [Multi-domain] Cd Length: 570 Bit Score: 60.39 E-value: 5.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 335 LLHRFWNLWRSQieqkkerellpllHAAWD--HYRIALlCKCIELWLQYTQKRRykqLLQARADGHFQQRALPAAFHTWn 412
Cdd:pfam08457 57 LRKKYFNAWREI-------------TAVNElkAQRFAL-KRPLGAWRRRTLQIR---VREEVAVQVYQENLLKRSFWKW- 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 413 rlwRWRHQENvlsaRATRFHRETLEKQVFSLWRQKMfqhRENRLAERMAILHAERQLLYRSWFMWHQQAAARHQEQ---- 488
Cdd:pfam08457 119 ---FWEFCER----RAPQWYDFRLKRRSLLTWLRKF---RTLREREQEAEAKRKRLLLSSALQIWSERTEAVQAAEqead 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 489 -------------EWQTVA---------CAHHRHGRLKKAFCLWRESAQGLRtertgrvRAAEFHMAQLLRWAWSQWR-- 544
Cdd:pfam08457 189 sfrrrkllrraldEWRIQArlepalrqvSAKVDRRILRSALSVWKLRARMSR-------QAREVDRARILRNAWTTWNde 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 545 -ECLALRG----------------AERQKLMRAdlHHQHSVLHRALQAWVTyqgRVRSILREVAARESQH----NRQLLR 603
Cdd:pfam08457 262 lRCKALREriderlklealykwvlEERLRLFQR--IREQRLKREVLSTWVT---NTRDTRTRLLRHEEEFeehrNRKLLR 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 604 GALRRWKENTMAR---------VDEAKKTFQVLVQWREavsvQMYYRQQEDCAIWEAQK-VLDRGCLRTW---------- 663
Cdd:pfam08457 337 SKLLKWRDQLAEQrereiaaneFYAPRLLQEALDAWRE----RHQHVQKLEKWARDARFyFLATRTLKKWraateesrre 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 664 ---------------------FQRWWDCSRRSAQQRLQLERAVQHHHRQLLLEGLARWKTHHLQCVRKrllHRQSTQLLA 722
Cdd:pfam08457 413 rrqdayaqvrrkvkinlarraLSKWRSKAAEVADLEQQADQLRQNRLLEDAIELFDRWRERTAKRKQR---AEDADQFYA 489
|
490 500
....*....|....*....|....*.
gi 385251390 723 QRLSRTCFRQWRQQLAA-RRQEQRAT 747
Cdd:pfam08457 490 EQLLRSYLARWRERLRElRELEQDAD 515
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
842-1035 |
6.98e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 6.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 842 GRGGKPQPLAAIAPSrkvtfegpllnriAAGAGDGTLETKRPQASRPLGAlgrlAAEEPHALELNTAHSARKQPRRPHFL 921
Cdd:PHA03247 2728 ARQASPALPAAPAPP-------------AVPAGPATPGGPARPARPPTTA----GPPAPAPPAAPAAGPPRRLTRPAVAS 2790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 922 LEPAQSQRPQKPQEHGLGMAQPAAPSLTRPFLAEAPTALVPHSPLPGALSSAPGPKQPPTAstgpellllplssfmPCGA 1001
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLP---------------LGGS 2855
|
170 180 190
....*....|....*....|....*....|....
gi 385251390 1002 AAPARVSAQRATPRDKPPVPSSLASVPDPHLLLP 1035
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP 2889
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
826-1052 |
1.79e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 826 HRAVRRCATLWKQKVLGRGGKPQPLAAIAPSRKVTFEgPLLNRIAAGAG--------DGTLETKRPQASRPLGALGRLA- 896
Cdd:pfam03154 228 HTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQ-PLPQPSLHGQMppmphslqTGPSHMQHPVPPQPFPLTPQSSq 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 897 AEEPHALELNTAHSARKQPRRPhfllePAQSQ--RPQKPQEHGLgmaqPAAPsLTRPFLAEAPTALVPHSPLPGALS--- 971
Cdd:pfam03154 307 SQVPPGPSPAAPGQSQQRIHTP-----PSQSQlqSQQPPREQPL----PPAP-LSMPHIKPPPTTPIPQLPNPQSHKhpp 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 972 --SAPGPKQ---------------------PPTASTGPELLLLPLSSFMPCGAAAPARVSAQRATPR-DKPPVPSSLASV 1027
Cdd:pfam03154 377 hlSGPSPFQmnsnlppppalkplsslsthhPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPaASHPPTSGLHQV 456
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 385251390 1028 PD-----PHLLLPGD-----------FSATRAGPGLSTAGS 1052
Cdd:pfam03154 457 PSqspfpQHPFVPGGpppitppsgppTSTSSAMPGIQPPSS 497
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
481-929 |
1.35e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.08 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 481 AAARHQEQEWQTVACAHHRHGRLKKAFCLWRESAQGLRTERTGRVRAAEFHMAQLLRWAWSQWRECLALRGAERQKLMRA 560
Cdd:COG3903 477 AAERLAEAGERAAARRRHADYYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAALAPFWF 556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 561 DLHHQHSVLHRALQAWVTYQGRVRSILREVAARESQHNRQLLRGALRRWKENTMARVDEAKKTFQVLVQWREAVSVQMYY 640
Cdd:COG3903 557 LRGLLREGRRWLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAA 636
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 641 RQQEDCAIWEAQKVLDRGCLRTWFQRWWDCSRRSAQQRLQLERAVQHHHRQLLLEGLARWKTHHLQCVRKRLLHRQSTQL 720
Cdd:COG3903 637 AAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAA 716
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 721 LAQRLSRTCFRQWRQQLAARRQEQRATVRALWFWAFSLQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLL 800
Cdd:COG3903 717 AAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAAAAAAAAA 796
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 801 RFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRGGKPQPLAAIAPSRKVTFEGPLLNRIAAGAGDGTLET 880
Cdd:COG3903 797 AAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAAAAAAAAALAAAAAA 876
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 385251390 881 KRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQSQR 929
Cdd:COG3903 877 AAAAAAALLAAAAAAAAAAAAAAAAAAALAAAAAAAAAAALAAAAAAAA 925
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| Sfi1 |
pfam08457 |
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ... |
335-747 |
5.00e-09 |
|
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.
Pssm-ID: 430007 [Multi-domain] Cd Length: 570 Bit Score: 60.39 E-value: 5.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 335 LLHRFWNLWRSQieqkkerellpllHAAWD--HYRIALlCKCIELWLQYTQKRRykqLLQARADGHFQQRALPAAFHTWn 412
Cdd:pfam08457 57 LRKKYFNAWREI-------------TAVNElkAQRFAL-KRPLGAWRRRTLQIR---VREEVAVQVYQENLLKRSFWKW- 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 413 rlwRWRHQENvlsaRATRFHRETLEKQVFSLWRQKMfqhRENRLAERMAILHAERQLLYRSWFMWHQQAAARHQEQ---- 488
Cdd:pfam08457 119 ---FWEFCER----RAPQWYDFRLKRRSLLTWLRKF---RTLREREQEAEAKRKRLLLSSALQIWSERTEAVQAAEqead 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 489 -------------EWQTVA---------CAHHRHGRLKKAFCLWRESAQGLRtertgrvRAAEFHMAQLLRWAWSQWR-- 544
Cdd:pfam08457 189 sfrrrkllrraldEWRIQArlepalrqvSAKVDRRILRSALSVWKLRARMSR-------QAREVDRARILRNAWTTWNde 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 545 -ECLALRG----------------AERQKLMRAdlHHQHSVLHRALQAWVTyqgRVRSILREVAARESQH----NRQLLR 603
Cdd:pfam08457 262 lRCKALREriderlklealykwvlEERLRLFQR--IREQRLKREVLSTWVT---NTRDTRTRLLRHEEEFeehrNRKLLR 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 604 GALRRWKENTMAR---------VDEAKKTFQVLVQWREavsvQMYYRQQEDCAIWEAQK-VLDRGCLRTW---------- 663
Cdd:pfam08457 337 SKLLKWRDQLAEQrereiaaneFYAPRLLQEALDAWRE----RHQHVQKLEKWARDARFyFLATRTLKKWraateesrre 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 664 ---------------------FQRWWDCSRRSAQQRLQLERAVQHHHRQLLLEGLARWKTHHLQCVRKrllHRQSTQLLA 722
Cdd:pfam08457 413 rrqdayaqvrrkvkinlarraLSKWRSKAAEVADLEQQADQLRQNRLLEDAIELFDRWRERTAKRKQR---AEDADQFYA 489
|
490 500
....*....|....*....|....*.
gi 385251390 723 QRLSRTCFRQWRQQLAA-RRQEQRAT 747
Cdd:pfam08457 490 EQLLRSYLARWRERLRElRELEQDAD 515
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
842-1035 |
6.98e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 6.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 842 GRGGKPQPLAAIAPSrkvtfegpllnriAAGAGDGTLETKRPQASRPLGAlgrlAAEEPHALELNTAHSARKQPRRPHFL 921
Cdd:PHA03247 2728 ARQASPALPAAPAPP-------------AVPAGPATPGGPARPARPPTTA----GPPAPAPPAAPAAGPPRRLTRPAVAS 2790
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 922 LEPAQSQRPQKPQEHGLGMAQPAAPSLTRPFLAEAPTALVPHSPLPGALSSAPGPKQPPTAstgpellllplssfmPCGA 1001
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLP---------------LGGS 2855
|
170 180 190
....*....|....*....|....*....|....
gi 385251390 1002 AAPARVSAQRATPRDKPPVPSSLASVPDPHLLLP 1035
Cdd:PHA03247 2856 VAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARP 2889
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
882-1052 |
1.05e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 882 RPQASRPLGAlGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQ-SQRPQKPQEHGLGMAQPAAPSLTRPFLAE----- 955
Cdd:PHA03247 2632 SPAANEPDPH-PPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQaSSPPQRPRRRAARPTVGSLTSLADPPPPPptpep 2710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 956 APTALVPHSPLP----------GALSSAPGPKQPPTASTGPELLLLPLSSFMPCGA------AAPARVSAQRATPRDKPP 1019
Cdd:PHA03247 2711 APHALVSATPLPpgpaaarqasPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPpapappAAPAAGPPRRLTRPAVAS 2790
|
170 180 190
....*....|....*....|....*....|...
gi 385251390 1020 VPSSLASVPDPHLLLPGDFSATRAGPGLSTAGS 1052
Cdd:PHA03247 2791 LSESRESLPSPWDPADPPAAVLAPAAALPPAAS 2823
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
847-1078 |
1.43e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 847 PQPLAAIAPSRKVTFEGPLLNRIAAGAGDGTLETKRPQASRPLgalgrlAAEEPHALELntahsARKQPRRPH--FLLEP 924
Cdd:PHA03247 2834 AQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA------APARPPVRRL-----ARPAVSRSTesFALPP 2902
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 925 AQSQRPQKPQehglgmaqPAAPSLTRPfLAEAPTALVPHSPLPGAlssaPGPKQPPTASTGPELLLLPLSSFMPCGAAAP 1004
Cdd:PHA03247 2903 DQPERPPQPQ--------APPPPQPQP-QPPPPPQPQPPPPPPPR----PQPPLAPTTDPAGAGEPSGAVPQPWLGALVP 2969
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 385251390 1005 ARVSAQRA-TPRDKPPVPSSLASVPDPHlllpgdfsaTRAGPGLST-AGSLDLEAELEEIQQQLlhyqttKQNLWS 1078
Cdd:PHA03247 2970 GRVAVPRFrVPQPAPSREAPASSTPPLT---------GHSLSRVSSwASSLALHEETDPPPVSL------KQTLWP 3030
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
844-1031 |
3.64e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 3.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 844 GGKPQPLAAIAPSrkvtfegpllnriaaGAGDGTLETKRPqASRPLGAlgrlaaeephalelntahSARKQPRRPHFLLE 923
Cdd:PHA03247 2549 GDPPPPLPPAAPP---------------AAPDRSVPPPRP-APRPSEP------------------AVTSRARRPDAPPQ 2594
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 924 PAQSQRPQKPQEHGLGMAQPAAPSLTRPFLAEAPTALVPH--SPLPGALSSAPGPKQPPTASTGPELLLLPLSSFMpcGA 1001
Cdd:PHA03247 2595 SARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAanEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRL--GR 2672
|
170 180 190
....*....|....*....|....*....|
gi 385251390 1002 AAPARVSAQRATPRDKPPVPSSLASVPDPH 1031
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
907-1130 |
4.10e-06 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.14 E-value: 4.10e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 907 TAHSARKQPRRPHFLLEPAQSQRPQKPQEH--GLGMAQPAAPSLTRPFLAEAPTALVPHSPLPGAlSSAPGPKQPPTAST 984
Cdd:PRK07764 598 EGPPAPASSGPPEEAARPAAPAAPAAPAAPapAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDA-SDGGDGWPAKAGGA 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 985 GPELLLLPLSSFMPCGAAAPARvSAQRATPRDKPPVPSSLASVPDPhlllPGDfSATRAGPGLSTAGSLDLEAELEEIQQ 1064
Cdd:PRK07764 677 APAAPPPAPAPAAPAAPAGAAP-AQPAPAPAATPPAGQADDPAAQP----PQA-AQGASAPSPAADDPVPLPPEPDDPPD 750
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 385251390 1065 QLLHYQTTKQNLWSCRRQASSLR-RWLELNREEPGPEDQEVEQQVQKELEQVEMQIQLLAEELQAQR 1130
Cdd:PRK07764 751 PAGAPAQPPPPPAPAPAAAPAAApPPSPPSEEEEMAEDDAPSMDDEDRRDAEEVAMELLEEELGAKK 817
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
846-1030 |
1.07e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.85 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 846 KPQPLAAIAPSRKVTfegPLLNRIAAGAGDGTletkrpQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPA 925
Cdd:PRK07003 411 APKAAAAAAATRAEA---PPAAPAPPATADRG------DDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPA 481
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 926 QSQRPQKPQEHGLGMAQPAAPSLTRPFLAEAPTAL-------VPHSPLPGALSSAPGPKQPPTASTGPELLL-------L 991
Cdd:PRK07003 482 SDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAsredapaAAAPPAPEARPPTPAAAAPAARAGGAAAALdvlrnagM 561
|
170 180 190
....*....|....*....|....*....|....*....
gi 385251390 992 PLSSFMPCGAAAPARVSAQRATPrDKPPVPSSLASVPDP 1030
Cdd:PRK07003 562 RVSSDRGARAAAAAKPAAAPAAA-PKPAAPRVAVQVPTP 599
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
842-1055 |
1.21e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 49.46 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 842 GRGGKPQPLAAIAPSRKVTFEGPllnRIAAGAGDGTLETKRPQASRPLGALgRLAAEEPHALELNTAhsarkqprrphfl 921
Cdd:PRK07003 363 TGGGAPGGGVPARVAGAVPAPGA---RAAAAVGASAVPAVTAVTGAAGAAL-APKAAAAAAATRAEA------------- 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 922 lEPAQSQRPQKPQEHGLGMAQPAAPSLTRPFLAEAPTALVPHSPLP---GALSSAPGPKQPPTASTGPELLLLPLSSFMP 998
Cdd:PRK07003 426 -PPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPpadSGSASAPASDAPPDAAFEPAPRAAAPSAATP 504
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 385251390 999 CGAAAPARVSAQRATPRDKPP-VPSSLASVPDPhlllPGDFSATRAGpglSTAGSLDL 1055
Cdd:PRK07003 505 AAVPDARAPAAASREDAPAAAaPPAPEARPPTP----AAAAPAARAG---GAAAALDV 555
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
874-1049 |
1.31e-05 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 49.68 E-value: 1.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 874 GDGTLETKRPQASRPLGALGRLAAEEPHALELNTA---HSARKQPRR-PHFLLEPAQSQRPQKPqeHGLGMAQPAAPSLT 949
Cdd:PHA03378 607 EPPTTQSHIPETSAPRQWPMPLRPIPMRPLRMQPItfnVLVFPTPHQpPQVEITPYKPTWTQIG--HIPYQPSPTGANTM 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 950 RPFLAeAPTALVPHSPLPGALS---SAPGPKQPPTASTGPellllplssfMPCGAAAPARVSAQRATPRDKPPvPSSLAS 1026
Cdd:PHA03378 685 LPIQW-APGTMQPPPRAPTPMRppaAPPGRAQRPAAATGR----------ARPPAAAPGRARPPAAAPGRARP-PAAAPG 752
|
170 180
....*....|....*....|...
gi 385251390 1027 VPDPHLLLPGDFSATRAGPGLST 1049
Cdd:PHA03378 753 RARPPAAAPGRARPPAAAPGAPT 775
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
846-1053 |
2.53e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 846 KPQPLAAIAPSRkVTFEGPLLNRIAAGAGDGTLETKRPQASRP-LGALGRLA---------AEEPHALELNTAHSARKQP 915
Cdd:PHA03247 2649 PERPRDDPAPGR-VSRPRRARRLGRAAQASSPPQRPRRRAARPtVGSLTSLAdpppppptpEPAPHALVSATPLPPGPAA 2727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 916 RRPHFLLEPAQSQRPQKPQehglGMAQPAAPS--LTRPFLAEAPTALVPHSPLPGALSSAPGPKQPPTASTGPELLLLPL 993
Cdd:PHA03247 2728 ARQASPALPAAPAPPAVPA----GPATPGGPArpARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWD 2803
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 994 SSFMPcgAAAPARVSAQRATPRDKPPVPSSLASVPDPHLLLPGDFSatragPGLSTAGSL 1053
Cdd:PHA03247 2804 PADPP--AAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPP-----PSLPLGGSV 2856
|
|
| Sfi1 |
pfam08457 |
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a ... |
424-786 |
3.06e-05 |
|
Sfi1 spindle body protein; This is a family of fungal spindle pole body proteins that play a role in spindle body duplication. They contain binding sites for calmodulin-like proteins called centrins which are present in microtubule-organizing centres.
Pssm-ID: 430007 [Multi-domain] Cd Length: 570 Bit Score: 48.06 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 424 LSARATRFHRETLEKQVFSLWRQKMFQHRENRLAERMAIlhaerqLLYRSWFMWHQQAAarhqeqEWQTvacaHHRHGRL 503
Cdd:pfam08457 18 LERRAARARDLYLLTKAFTHWAQAASEEVERTSAARRHI------LRKKYFNAWREITA------VNEL----KAQRFAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 504 KKAFCLWRESAQGLRTErtgRVRAAEFHMAQLLRWAWSQWRECLALRGAER---QKLMR-------------------AD 561
Cdd:pfam08457 82 KRPLGAWRRRTLQIRVR---EEVAVQVYQENLLKRSFWKWFWEFCERRAPQwydFRLKRrslltwlrkfrtlrereqeAE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 562 LHHQHSVLHRALQAWvtyQGRVRSILREVAARESQHNRQLLRGALRRWKENT---------MARVDEAKKTFqVLVQWRE 632
Cdd:pfam08457 159 AKRKRLLLSSALQIW---SERTEAVQAAEQEADSFRRRKLLRRALDEWRIQArlepalrqvSAKVDRRILRS-ALSVWKL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 633 AVSVQmyyRQQEDCAiweaqkvlDRGCLRTWFQRWWDCSRRSAQQ-----RLQLE-----------RAVQHHHRQ-LLLE 695
Cdd:pfam08457 235 RARMS---RQAREVD--------RARILRNAWTTWNDELRCKALRerideRLKLEalykwvleerlRLFQRIREQrLKRE 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 696 GLARWKTHHLQcVRKRLLHRQST--QLLAQRLSRTCFRQWRQQLAARRQEQRAtvrALWFWAFSLQAKVWATWLAfvlER 773
Cdd:pfam08457 304 VLSTWVTNTRD-TRTRLLRHEEEfeEHRNRKLLRSKLLKWRDQLAEQREREIA---ANEFYAPRLLQEALDAWRE---RH 376
|
410
....*....|...
gi 385251390 774 RRKKARLQWALQA 786
Cdd:pfam08457 377 QHVQKLEKWARDA 389
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
826-1052 |
1.79e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 1.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 826 HRAVRRCATLWKQKVLGRGGKPQPLAAIAPSRKVTFEgPLLNRIAAGAG--------DGTLETKRPQASRPLGALGRLA- 896
Cdd:pfam03154 228 HTLIQQTPTLHPQRLPSPHPPLQPMTQPPPPSQVSPQ-PLPQPSLHGQMppmphslqTGPSHMQHPVPPQPFPLTPQSSq 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 897 AEEPHALELNTAHSARKQPRRPhfllePAQSQ--RPQKPQEHGLgmaqPAAPsLTRPFLAEAPTALVPHSPLPGALS--- 971
Cdd:pfam03154 307 SQVPPGPSPAAPGQSQQRIHTP-----PSQSQlqSQQPPREQPL----PPAP-LSMPHIKPPPTTPIPQLPNPQSHKhpp 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 972 --SAPGPKQ---------------------PPTASTGPELLLLPLSSFMPCGAAAPARVSAQRATPR-DKPPVPSSLASV 1027
Cdd:pfam03154 377 hlSGPSPFQmnsnlppppalkplsslsthhPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPaASHPPTSGLHQV 456
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 385251390 1028 PD-----PHLLLPGD-----------FSATRAGPGLSTAGS 1052
Cdd:pfam03154 457 PSqspfpQHPFVPGGpppitppsgppTSTSSAMPGIQPPSS 497
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
852-1043 |
7.38e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 43.71 E-value: 7.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 852 AIAPSRKVTFEGPLLNRIA---AGAGDGTleTKRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQSQ 928
Cdd:PRK12323 344 ALAPDEYAGFTMTLLRMLAfrpGQSGGGA--GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAA 421
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 929 RPQKPQEHGLGMAQPAAPSLTRPFLAEAPTALVPHSPLPGALSSAPGPKQPPTASTGPELLLLPLSSFMPCGAA------ 1002
Cdd:PRK12323 422 APARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDpppwee 501
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 385251390 1003 APARVSAQRATPRDKPPVPSSLASVPDPHLLLPGDFSATRA 1043
Cdd:PRK12323 502 LPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLA 542
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
481-929 |
1.35e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.08 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 481 AAARHQEQEWQTVACAHHRHGRLKKAFCLWRESAQGLRTERTGRVRAAEFHMAQLLRWAWSQWRECLALRGAERQKLMRA 560
Cdd:COG3903 477 AAERLAEAGERAAARRRHADYYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAALAPFWF 556
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 561 DLHHQHSVLHRALQAWVTYQGRVRSILREVAARESQHNRQLLRGALRRWKENTMARVDEAKKTFQVLVQWREAVSVQMYY 640
Cdd:COG3903 557 LRGLLREGRRWLERALAAAGEAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAA 636
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 641 RQQEDCAIWEAQKVLDRGCLRTWFQRWWDCSRRSAQQRLQLERAVQHHHRQLLLEGLARWKTHHLQCVRKRLLHRQSTQL 720
Cdd:COG3903 637 AAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAA 716
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 721 LAQRLSRTCFRQWRQQLAARRQEQRATVRALWFWAFSLQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLL 800
Cdd:COG3903 717 AAAAAAAAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAAAAAAAAA 796
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 801 RFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRGGKPQPLAAIAPSRKVTFEGPLLNRIAAGAGDGTLET 880
Cdd:COG3903 797 AAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAAAAAAAAAAAAAAALAAALAAAAAAAAAAALAAAAAA 876
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 385251390 881 KRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRRPHFLLEPAQSQR 929
Cdd:COG3903 877 AAAAAAALLAAAAAAAAAAAAAAAAAAALAAAAAAAAAAALAAAAAAAA 925
|
|
| NACHT |
COG5635 |
Predicted NTPase, NACHT family domain [Signal transduction mechanisms]; |
298-767 |
1.39e-03 |
|
Predicted NTPase, NACHT family domain [Signal transduction mechanisms];
Pssm-ID: 444362 [Multi-domain] Cd Length: 935 Bit Score: 42.87 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 298 HRHSQLYFCFRALKDNVTHAHLQQIRRNLAHQQHGVTLLHRFWNLWRSQIEQKKERELLPLLHAAWDHYRIALLckciel 377
Cdd:COG5635 474 HRSFQEYLAARALVEELDEELLELLAEHLEDPRWREVLLLLAGLLDDVKQIKELIDALLARDDAAALALAAALL------ 547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 378 wlqyTQKRRYKQLLQARADGHFQQRALPAAFHTWNRLWRWRHQENVLSARATRFHRETLEKQVFSLWRQKMFQHRENRLA 457
Cdd:COG5635 548 ----LALLLALALLALLALLLLLRLLLALLALLLLALLLLLLLALLLALLALDLGLAALLLLLLLLLLLLLLLALALLLA 623
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 458 ERMAILHAERQLLYRSWFmWHQQAAARHQEQEWQTVACAHHRHGRLKKAFCLWRESAQGLRTERTGRVRAAEFHMAQLLR 537
Cdd:COG5635 624 LLLLLLLLLLAELLLLAL-LALVLLSLLLASRLLLITLLLLAAASAALLLLLLLLLAELLLALLALASLLLLLLLALALA 702
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 538 WAWSQWRECLALRGAERQKLMRADLHHQHSVLHRALQAWVTYQGRVRSILREVAARESQHNRQLLRGALRRWKENTMARV 617
Cdd:COG5635 703 LALLLLAVLLAAALDLLLLLVLLLALLLVLALALSLLLLALALLLAGALLLESSALLAVLLASLLLALLLLSLLLLLVLL 782
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 618 DEAKKTFQVLVQWREAVSVQMYYRQQEDCAIWEAQKVLDRGCLRTWFQRWWDCSRRSAQQRLQLERAVQHHHRQLLLEGL 697
Cdd:COG5635 783 LALALLASLLLALLLLILLLVLLGSLLLLRLLDDLALLLLLALAAARLLLSSLALVALELARASLGASLVLLALLLATLL 862
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 698 ARWKTHHLQCVRKRLLHRQSTQLLAQRLSRTCFRQWRQQLAARRQEQRATVRALWFWAFSLQAKVWATWL 767
Cdd:COG5635 863 LLLLLLLALALALLSLLSLSSLALLSLLGLLLALSLLALLLLSLSLALAALLLAAREALTLDRLLSLASL 932
|
|
| COG3899 |
COG3899 |
Predicted ATPase [General function prediction only]; |
368-835 |
1.63e-03 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443106 [Multi-domain] Cd Length: 1244 Bit Score: 42.92 E-value: 1.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 368 IALLCKCIELWLQYTQKRRYKQLLQARADGHFQQRALPAAFHTWNRLWRWRHQENVLSARATRFHRETLEKQVFSLWRQK 447
Cdd:COG3899 725 LRYLERALELLPPDPEEEYRLALLLELAEALYLAGRFEEAEALLERALAARALAALAALRHGNPPASARAYANLGLLLLG 804
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 448 MFQ--HRENRLAERMAILHAERQLLYRSWFMWHQQAAARHQEQEWQTVACAHHRHGRLKKAFCLWRESAQGLRTERTGRV 525
Cdd:COG3899 805 DYEeaYEFGELALALAERLGDRRLEARALFNLGFILHWLGPLREALELLREALEAGLETGDAALALLALAAAAAAAAAAA 884
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 526 RAAEFHMAQLLRWAWSQWRECLALRGAERQKLMRADLHHQHSVLHRALQAWVTYQGRVRSILREVAAREsqhnrqlLRGA 605
Cdd:COG3899 885 ALAAAAAAAARLLAAAAAALAAAAAAAALAAAELARLAAAAAAAAALALAAAAAAAAAAALAAAAAAAA-------LAAA 957
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 606 LRRWKENTMARVDEAKKTFQVLVQWREAVSVQMYYRQQEDCAIWEAQKVLDRGCLRTWFQRWWDCSRRSAQQRLQLERAV 685
Cdd:COG3899 958 LALAAAAAAAAAAALAAAAAAAAAAAAAAAAAALEAAAAALLALLAAAAAAAAAAAALAAALLAAALAALAAAAAAAALL 1037
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 686 QHHHRQLLLEGLARWKTHHLQCVRKRLLHRQSTQLLAQRLSRTCFRQWRQQLAARRQEQRATVRALWFWAFSLQAKVWAT 765
Cdd:COG3899 1038 AAAAALALLAALAAAAAAAAAAAALAAAAALLAAAAAAAAAAAAAAAAAALAAALAAAALAAAAAAALALAAALAALALA 1117
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 766 WLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATL 835
Cdd:COG3899 1118 AALAALALAAAARAAAALLLLAAALALALAALLLLAALLLALALLLLALAALALAAALAALAAALLAAAA 1187
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
847-1068 |
3.56e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.40 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 847 PQPLAAIAPSRKVTfEGPLLNRIAAGAGDGTLETKRPQASRPLGALGRLAAEEPHALELNTAHSARKQPRrPHFLLEPAQ 926
Cdd:PRK12323 383 AQPAPAAAAPAAAA-PAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA-PAPAAAPAA 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 927 SQRPQKPQEHGLGMA--------QPAAPSltrpflAEAPTALVPHSPLPGALSSaPGPKQPPTASTGPEllllpLSSFMP 998
Cdd:PRK12323 461 AARPAAAGPRPVAAAaaaaparaAPAAAP------APADDDPPPWEELPPEFAS-PAPAQPDAAPAGWV-----AESIPD 528
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 385251390 999 CGAAAPARVSAQRATPRDKPPVPSSLASVPDPHLLLPGDFSATRAGPgLSTAGSLDLEAEL--EEIQQQLLH 1068
Cdd:PRK12323 529 PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPD-MFDGDWPALAARLpvRGLAQQLAR 599
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
891-1028 |
6.46e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 6.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 891 ALGRLAAEEPHALELNTAHSARKQPRRPHfLLEPAQSQRPQKpqehglgmAQPAAPSLTRPFLAEAPTALVPHSPlPGAL 970
Cdd:PRK14951 357 VLLRLLAFKPAAAAEAAAPAEKKTPARPE-AAAPAAAPVAQA--------AAAPAPAAAPAAAASAPAAPPAAAP-PAPV 426
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 385251390 971 SSAPGPKQPPTASTGPELLLLPLSSFM---PCGAAAPARVSAQRATPRDKPPVPSSLASVP 1028
Cdd:PRK14951 427 AAPAAAAPAAAPAAAPAAVALAPAPPAqaaPETVAIPVRVAPEPAVASAAPAPAAAPAAAR 487
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
941-1053 |
7.53e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 40.47 E-value: 7.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 385251390 941 AQPAAPSLTRPFLAEAPTALVPHSPLPGALSSAPGPKQPPTASTGPELLLLPLSSFMPCGAAAPARVSAQRATPRDKPPV 1020
Cdd:PRK14951 379 KTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAPPAQAAPE 458
|
90 100 110
....*....|....*....|....*....|....*
gi 385251390 1021 PSSLA--SVPDPHLLLPGDFSATRAGPGLSTAGSL 1053
Cdd:PRK14951 459 TVAIPvrVAPEPAVASAAPAPAAAPAAARLTPTEE 493
|
|
|