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Conserved domains on  [gi|545687135|ref|NP_001270128|]
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transport and Golgi organization protein 2 homolog isoform e [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TANGO2 pfam05742
Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in ...
1-184 5.39e-77

Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse Tango2 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. This gene has been characterized in Drosophila melanogaster and named as transport and Golgi organisation 2, hence the name Tango2.


:

Pssm-ID: 428613  Cd Length: 255  Bit Score: 231.37  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135    1 MCIIFFKFDPRPvsknAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMeEGKEGGTWLGISTRGKLAALTNYLQPQ 80
Cdd:pfam05742   1 MCILFFAWNAHP----KYPLILAANRDEFYNRPTKPAHWWEENPNILGGRDL-EGREGGTWLGITKQGRIAALTNYREPS 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135   81 LD----WQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLRQL--------------------------- 129
Cdd:pfam05742  76 SPppdaVGARSRGLLVNDFLTSNPDPEEYLEELAKEADKYNGFNLLVGDLNGSkslayisnrgnptpdqlspgihglsns 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135  130 ---------------------------------------------PDPAIEDQGGEYVQPMlskyAAVCVRCP----GYG 160
Cdd:pfam05742 156 lldtpwpkvergkrlfeelieesvelsedelieelfdllsddtlpRDPELPDTGPEWERLL----SSIFIPPIppggRYG 231
                         250       260
                  ....*....|....*....|....
gi 545687135  161 TRTNTIILVDADGHVTFTERSMMD 184
Cdd:pfam05742 232 TRSQTVILVDKEGKVTFIERTLYD 255
 
Name Accession Description Interval E-value
TANGO2 pfam05742
Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in ...
1-184 5.39e-77

Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse Tango2 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. This gene has been characterized in Drosophila melanogaster and named as transport and Golgi organisation 2, hence the name Tango2.


Pssm-ID: 428613  Cd Length: 255  Bit Score: 231.37  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135    1 MCIIFFKFDPRPvsknAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMeEGKEGGTWLGISTRGKLAALTNYLQPQ 80
Cdd:pfam05742   1 MCILFFAWNAHP----KYPLILAANRDEFYNRPTKPAHWWEENPNILGGRDL-EGREGGTWLGITKQGRIAALTNYREPS 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135   81 LD----WQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLRQL--------------------------- 129
Cdd:pfam05742  76 SPppdaVGARSRGLLVNDFLTSNPDPEEYLEELAKEADKYNGFNLLVGDLNGSkslayisnrgnptpdqlspgihglsns 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135  130 ---------------------------------------------PDPAIEDQGGEYVQPMlskyAAVCVRCP----GYG 160
Cdd:pfam05742 156 lldtpwpkvergkrlfeelieesvelsedelieelfdllsddtlpRDPELPDTGPEWERLL----SSIFIPPIppggRYG 231
                         250       260
                  ....*....|....*....|....
gi 545687135  161 TRTNTIILVDADGHVTFTERSMMD 184
Cdd:pfam05742 232 TRSQTVILVDKEGKVTFIERTLYD 255
NRDE COG3332
Uncharacterized conserved protein, contains NRDE domain [Function unknown];
1-187 2.37e-34

Uncharacterized conserved protein, contains NRDE domain [Function unknown];


Pssm-ID: 225869  Cd Length: 270  Bit Score: 122.69  E-value: 2.37e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135   1 MCIIFFKFDPRPvsknAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGK-EGGTWLGISTRGKLAALTNYLQP 79
Cdd:COG3332    1 MCLLMFAWQAHP----AYPLVVAANRDEFYARPKLPAACWHDAPFVLAGRDLAKGSaEFGTWLGITKEGKFAALTNVRDP 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135  80 --QLDWQARGRGELVTHFLTT-DVDSLSYLKKVSMEGHLYNGFNLIAADL-------------RQLPD------------ 131
Cdd:COG3332   77 seQNNTKSRSRGELVADFLSIhKASFEDYLNQLKKRAGHYDGFNLLYGDRhklwyyvnrsetpRKLLPgyyglsngflds 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135 132 -------------PAIEDQGGEYVQPMLSKY----------------------------AAVCVRCPGYGTRTNTIILVD 170
Cdd:COG3332  157 pwpkvkkaraalaELLAENIEHDEEKIISSClqlladsslapdgqlpdtgvgvewerllSTIFIPGPYYGTRASTVLRVS 236
                        250
                 ....*....|....*....
gi 545687135 171 ADGHVTFTERSM--MDKDL 187
Cdd:COG3332  237 KDGTVTFIERVFgpSGEDV 255
 
Name Accession Description Interval E-value
TANGO2 pfam05742
Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in ...
1-184 5.39e-77

Transport and Golgi organisation 2; In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse Tango2 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. This gene has been characterized in Drosophila melanogaster and named as transport and Golgi organisation 2, hence the name Tango2.


Pssm-ID: 428613  Cd Length: 255  Bit Score: 231.37  E-value: 5.39e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135    1 MCIIFFKFDPRPvsknAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMeEGKEGGTWLGISTRGKLAALTNYLQPQ 80
Cdd:pfam05742   1 MCILFFAWNAHP----KYPLILAANRDEFYNRPTKPAHWWEENPNILGGRDL-EGREGGTWLGITKQGRIAALTNYREPS 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135   81 LD----WQARGRGELVTHFLTTDVDSLSYLKKVSMEGHLYNGFNLIAADLRQL--------------------------- 129
Cdd:pfam05742  76 SPppdaVGARSRGLLVNDFLTSNPDPEEYLEELAKEADKYNGFNLLVGDLNGSkslayisnrgnptpdqlspgihglsns 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135  130 ---------------------------------------------PDPAIEDQGGEYVQPMlskyAAVCVRCP----GYG 160
Cdd:pfam05742 156 lldtpwpkvergkrlfeelieesvelsedelieelfdllsddtlpRDPELPDTGPEWERLL----SSIFIPPIppggRYG 231
                         250       260
                  ....*....|....*....|....
gi 545687135  161 TRTNTIILVDADGHVTFTERSMMD 184
Cdd:pfam05742 232 TRSQTVILVDKEGKVTFIERTLYD 255
NRDE COG3332
Uncharacterized conserved protein, contains NRDE domain [Function unknown];
1-187 2.37e-34

Uncharacterized conserved protein, contains NRDE domain [Function unknown];


Pssm-ID: 225869  Cd Length: 270  Bit Score: 122.69  E-value: 2.37e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135   1 MCIIFFKFDPRPvsknAYRLILAANRDEFYSRPSKLADFWGNNNEILSGLDMEEGK-EGGTWLGISTRGKLAALTNYLQP 79
Cdd:COG3332    1 MCLLMFAWQAHP----AYPLVVAANRDEFYARPKLPAACWHDAPFVLAGRDLAKGSaEFGTWLGITKEGKFAALTNVRDP 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135  80 --QLDWQARGRGELVTHFLTT-DVDSLSYLKKVSMEGHLYNGFNLIAADL-------------RQLPD------------ 131
Cdd:COG3332   77 seQNNTKSRSRGELVADFLSIhKASFEDYLNQLKKRAGHYDGFNLLYGDRhklwyyvnrsetpRKLLPgyyglsngflds 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545687135 132 -------------PAIEDQGGEYVQPMLSKY----------------------------AAVCVRCPGYGTRTNTIILVD 170
Cdd:COG3332  157 pwpkvkkaraalaELLAENIEHDEEKIISSClqlladsslapdgqlpdtgvgvewerllSTIFIPGPYYGTRASTVLRVS 236
                        250
                 ....*....|....*....
gi 545687135 171 ADGHVTFTERSM--MDKDL 187
Cdd:COG3332  237 KDGTVTFIERVFgpSGEDV 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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