|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
40-616 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1008.50 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 40 NKRASAKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQ--------------- 104
Cdd:PTZ00139 8 NRLTRTFFSGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQgginaalgnmteddw 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 105 ---------------------------------LENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHS 151
Cdd:PTZ00139 88 rwhaydtvkgsdwlgdqdaiqymcreapqavleLESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 152 LLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTA 230
Cdd:PTZ00139 168 MLHTLYGQSLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGA 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 231 MITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG 310
Cdd:PTZ00139 248 MVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 311 PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNG-QDQIVPGLYA 389
Cdd:PTZ00139 328 PNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGdDDKIVPGLLA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 390 CGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK 469
Cdd:PTZ00139 408 AGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQR 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 470 SMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:PTZ00139 488 TMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDF 567
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 661567360 550 KVRIDeydyskpiqgqqkkpfeEHWRKHTLSYV-DVGTGKVTLEYRPVIDKTLNEaDCATVPPAIRSY 616
Cdd:PTZ00139 568 PERDD-----------------KNWMKHTLSYIrDVKKGKVRLTYRPVITTPLDN-EMETVPPAKRVY 617
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
80-616 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 943.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 80 LSEAGFNTACVTKLFPTRSHTVAAQ------------------------------------------------LENYGMP 111
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQggisaalgnmeednwrwhmydtvkgsdwlgdqdaieymckqapeavleLEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 112 FSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCI 191
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 192 EDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 271
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 272 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 351
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 352 IPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGD 431
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLRDGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 432 KVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWN 511
Cdd:TIGR01816 401 DVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 512 TDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGKVTL 591
Cdd:TIGR01816 481 TDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDD-----------------ENWLKHTLSYVDINTGKVLL 543
|
570 580
....*....|....*....|....*
gi 661567360 592 EYRPVIDKTLNEADCAtvpPAIRSY 616
Cdd:TIGR01816 544 SYKPVIFKPLTVADFE---PKKRVY 565
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
9-616 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 922.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 9 RLLSARRLALAKAWPTVLQTGTrgfhftVDGNKRASAKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTA 88
Cdd:PLN00128 4 RCVARGLRLLASSSASSSLASA------SLRTALSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 89 CVTKLFPTRSHTVAAQ------------------------------------------------LENYGMPFSRTEDGKI 120
Cdd:PLN00128 78 CITKLFPTRSHTVAAQgginaalgnmteddwrwhmydtvkgsdwlgdqdaiqymcreapkavieLENYGLPFSRTEDGKI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 121 YQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGSIHRI 199
Cdd:PLN00128 158 YQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSdGACQGVIALNMEDGTLHRF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 200 RAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFM 279
Cdd:PLN00128 238 RAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFM 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 280 ERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVH 359
Cdd:PLN00128 318 ERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVH 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 360 YNMGGIPTNYKGQVLR-HVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKP 438
Cdd:PLN00128 398 YNMGGIPTNYHGEVVTiKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPK 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 439 NAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETL 518
Cdd:PLN00128 478 DAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETL 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 519 ELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvgTGKVTLEYRPVID 598
Cdd:PLN00128 558 ELENLLINACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWE--EGKVRLDYRPVHM 618
|
650
....*....|....*...
gi 661567360 599 KTLNEaDCATVPPAIRSY 616
Cdd:PLN00128 619 NTLDD-EVETFPPKARVY 635
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
82-616 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 674.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 82 EAGFNTACVTKLFPTRSHTVAAQ-------------------------------------------------LENYGMPF 112
Cdd:TIGR01812 20 KAGLNTAVISKVYPTRSHTVAAQggmaaalgnvdpddswewhaydtvkgsdyladqdaveymcqeapkaileLEHWGVPF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 113 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE 192
Cdd:TIGR01812 100 SRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 193 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILIN 272
Cdd:TIGR01812 172 TGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 273 SQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG-PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 351
Cdd:TIGR01812 252 KNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 352 IPVLPTVHYNMGGIPTNYKGQVLRhvngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESC-RPG 430
Cdd:TIGR01812 332 IPVRPTAHYSMGGIPTDYTGRVIC-----ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYAaKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 431 DKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVW 510
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 511 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvGTGKVT 590
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDD-----------------ENWLKHTLAYYD-NPGTPR 548
|
570 580
....*....|....*....|....*.
gi 661567360 591 LEYRPVidktlneaDCATVPPAIRSY 616
Cdd:TIGR01812 549 LEYKPV--------TITKYEPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
81-599 |
2.62e-159 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 468.77 E-value: 2.62e-159
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 81 SEAGFNTACVTKLFPTRSHTVAAQ------------------------------------------------LENYGMPF 112
Cdd:PRK06069 28 SGGKLSVAVVSKTQPMRSHSVSAEggtaavlypekgdsfdlhaydtvkgsdfladqdavevfvreapeeirfLDHWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 113 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV-EYFALDLLMENGECRGVIALCI 191
Cdd:PRK06069 108 SRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDNIHFYdEHFVTSLIVENGVFKGVTAIDL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 192 EDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 271
Cdd:PRK06069 180 KRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 272 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKD--HVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 349
Cdd:PRK06069 260 NKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 350 EPIPVLPTVHYNMGGIPTNYKGQVLRHvngQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGR-----ACALSIE 424
Cdd:PRK06069 340 EPIPVRPAAHYTMGGIHTDVYGRVLTA---DGEWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRiageqAAEYALK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 425 escRPGDKVPPIKPNAGEESVMnLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTF 504
Cdd:PRK06069 417 ---RPAPSSPVEKLAEKEEKRI-FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIE 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 505 DRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDV 584
Cdd:PRK06069 493 DKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDD-----------------ENWLKHTLAYYTG 555
|
570
....*....|....*.
gi 661567360 585 GTGKVTleYRPV-IDK 599
Cdd:PRK06069 556 GGPKVT--YTPVtITK 569
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
85-597 |
1.17e-158 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 467.29 E-value: 1.17e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 85 FNTACVTKLFPTRSHTVAAQ-------------------------------------------------LENYGMPFSRT 115
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQggiaaslknvdpedsweahafdtvkgsdyladqdavailtqeapdviidLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 116 EDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGS 195
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 196 IHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQG 275
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 276 ERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE----KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 351
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 352 IPVLPTVHYNMGGIPTNYKGQVLRHVngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRpGD 431
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVRRSA---DGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQ-GR 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 432 KVPPIKPNAG-EESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVW 510
Cdd:PRK05945 417 KLPEVDEQRYlKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCW 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 511 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvgTGKVT 590
Cdd:PRK05945 497 NTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDD-----------------QNFLKHTLAYYS--PAGID 557
|
....*..
gi 661567360 591 LEYRPVI 597
Cdd:PRK05945 558 IQYMPVV 564
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
88-616 |
3.96e-141 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 422.51 E-value: 3.96e-141
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 88 ACVTKLFPTRSHTVAA----------------------------------------------QLENYGMPFSRTEDGKIY 121
Cdd:PRK09231 33 ALISKVYPMRSHTVAAeggsaavaqdhdsfdyhfhdtvaggdwlceqdvveyfvhhcptemtQLEQWGCPWSRKPDGSVN 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 122 QRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSY-FVEYFALDLLMENGECRGVIALCIEDGSIHRIR 200
Cdd:PRK09231 113 VRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIR 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 201 AKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFME 280
Cdd:PRK09231 185 ANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQ 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 281 RYA-----PVAK------DLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVT 348
Cdd:PRK09231 265 DYGlgpetPLGEpknkymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVDPV 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 349 KEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACAlsiEESCR 428
Cdd:PRK09231 345 KEPIPVRPTAHYTMGGIETD--------QNCETRI-KGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAG---EQAAE 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 429 PGDKVPPIKPNA----GEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTF 504
Cdd:PRK09231 413 RAATAGPGNEAAldaqAADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVRIT 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 505 DRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARED--YKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYV 582
Cdd:PRK09231 493 DTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDD-----------------VNFLKHTLAFY 555
|
570 580 590
....*....|....*....|....*....|....*
gi 661567360 583 DvGTGKVTLEYRPV-IDKTlneadcatvPPAIRSY 616
Cdd:PRK09231 556 N-ADGTPRIEYSDVkITKS---------PPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
104-549 |
2.42e-130 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 392.55 E-value: 2.42e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 104 QLENYGMPFSRTEDGKIYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDT-SYFVEYFALDLLME-NG 181
Cdd:COG0029 92 ELIELGVPFDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNiTVLENHFAVDLITDaDG 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 182 ECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---L 258
Cdd:COG0029 164 RCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfL 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 259 ITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRGcgpekDHVYLQLHHLPPEQLATRLPGISET 338
Cdd:COG0029 244 ISEAVRGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYAR 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 339 AMIFaGVDVTKEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQ-DqiVPGLYACGEAACASVHGANRLGANSLLDLVVFGR 417
Cdd:COG0029 318 CLEL-GIDITKEPIPVAPAAHYTMGGVATD--------LDGRtS--IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGR 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 418 ACALSIEESCRPGDKVPPIKpnAGEESVMNldklrfADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGD 497
Cdd:COG0029 387 RAAEDIAARLAESPLPPEIP--EWDESVTD------PDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREE 458
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 661567360 498 LKHLKTFdrgmvwnTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:COG0029 459 IEEYANF-------RVSRDLLELRNLLLVAELIVRAALARKESRGAHYRSDY 503
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
80-596 |
1.88e-124 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 379.23 E-value: 1.88e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 80 LSEAGFNTACVTKLFPTRSHTVAAQ--------------------------------------------------LENYG 109
Cdd:PRK06452 24 IASAGFKVAVISKVFPTRSHSAAAEggiaayipgnsdpndnpdymtydtvkggdylvdqdaaellsnksgeivmlLERWG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 110 MPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 189
Cdd:PRK06452 104 ALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 190 CIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 269
Cdd:PRK06452 176 QMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 270 LINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCgpEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 349
Cdd:PRK06452 256 LKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFT 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 350 EPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRP 429
Cdd:PRK06452 334 EPIPVRPAQHYYMGGIDVD--------IDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLKS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 430 GDKVPPIK-PNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGM 508
Cdd:PRK06452 406 NPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSK 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 509 VWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGK 588
Cdd:PRK06452 486 VYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDD-----------------NNWLKHTIAYLRGNTVE 548
|
....*...
gi 661567360 589 VTleYRPV 596
Cdd:PRK06452 549 VT--FKPV 554
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
105-556 |
1.15e-118 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 363.15 E-value: 1.15e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 105 LENYGMPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGEC 183
Cdd:PRK06263 97 LEKFGALFDRTEDGEIAQRPFGGQSFN--------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVdENREV 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 184 RGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI----YGAGCLI 259
Cdd:PRK06263 169 IGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILV 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 260 TEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCgpekDH--VYLQLHHLPPEQLATRLPGISE 337
Cdd:PRK06263 249 TEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGT----NHggVYLDVTHLPDEVIEEKLETMLE 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 338 TAMIFaGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 417
Cdd:PRK06263 325 QFLDV-GVDIRKEPMEVAPTAHHFMGGIRINEDCET---------NIPGLFACGEVA-GGVHGANRLGGNALADTQVFGA 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 418 ACALSieeSCRPGDKVPPIKPN-AGEESVMNLDKL-RFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLY 495
Cdd:PRK06263 394 IAGKS---AAKNAENNEFKKVNrSVEEDIARIKSEiKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELK 470
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 661567360 496 GDLKHLKTFDRgmvwnTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEY 556
Cdd:PRK06263 471 EKLKDLKVNGI-----VDFNKALELENMILVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
82-616 |
4.50e-110 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 344.65 E-value: 4.50e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 82 EAGFNTACVTKLFPTRSHTVAAQ---------------------------------------------------LENYGM 110
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQggmqaslgnavkgegdnedvhfadtvkgsdwgcdqevarmfvhtapkavreLAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 111 PFSR-----------------TED----GKIYQRAFGGQSlKFgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV 169
Cdd:PRK08626 106 PWTRvtagprtvvingekvtiTEKeeahGLINARDFGGTK-KW-------RTCYTADGTGHTMLYAVDNEAIKLGVPVHD 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 170 EYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGL-PCQDLEFVQFH 248
Cdd:PRK08626 178 RKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFH 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 249 PTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQ 327
Cdd:PRK08626 258 PTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKH 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 328 LATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdQIVPGLYACGEAACASVHGANRLGAN 407
Cdd:PRK08626 338 IETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGES--------YGLKGLFSAGEAACWDMHGFNRLGGN 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 408 SLLDLVVFGRACALSIEESCRPGDKVppIKPNAGEESVMN----LDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSV 483
Cdd:PRK08626 410 SLAETVVAGMIVGKYVADFCLGNELE--IDTALVEKFVKKqqdrIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPE 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 484 LQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiq 563
Cdd:PRK08626 488 LEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRND--------- 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 661567360 564 gqqkkpfeEHWRKHTLSY-VDVGTGKVTLEYRPViDKTLNEadcatVPPAIRSY 616
Cdd:PRK08626 559 --------RDWLNRTLASwPEGEALEPTLEYEPL-DVMKME-----LPPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
80-423 |
2.11e-107 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 330.64 E-value: 2.11e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 80 LSEAGFNTACVTKLFPTRSHTVAAQ----------------------------------------------------LEN 107
Cdd:COG1053 22 AAEAGLKVLVLEKVPPRGGHTAAAQgginaagtnvqkaagedspeehfydtvkggdgladqdlvealaeeapeaidwLEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 108 YGMPFSRTEDGKIYQraFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVI 187
Cdd:COG1053 102 QGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 188 ALCiEDGSIHRIRAKNTVVATGGYGRTY------------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGA 255
Cdd:COG1053 172 ARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 256 GCLITEGCRG-EGGILINSQGERFMERYAPvakdlasRDVVSRSMTLEIREG------------------RGCGPEKDHV 316
Cdd:COG1053 251 GGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPaylvldlrhrrrleeyleAGYLVKADTI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 317 ylqlhhlppEQLATRLpGISETAMIF----------AGVDVTKE-----------PIPVLPTVHYNMGGIPTNYKGQVLR 375
Cdd:COG1053 324 ---------EELAAKL-GIDAAELAAtvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVLD 393
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 661567360 376 hvnGQDQIVPGLYACGEaACASVHGANRLGANSLLDLVVFGRACALSI 423
Cdd:COG1053 394 ---ADGTPIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
80-409 |
3.01e-105 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 323.47 E-value: 3.01e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 80 LSEAGFNTACVTKLFPTRSHTVAAQ--------------------------------------------------LENYG 109
Cdd:pfam00890 18 AAEAGLKVAVVEKGQPFGGATAWSSggidalgnppqggidspelhptdtlkgldeladhpyveafveaapeavdwLEALG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 110 MPFSRTEDGKIYQRAFGGQSLKfgkggqAHRCCCVADR-----TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECR 184
Cdd:pfam00890 98 VPFSRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRVT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 185 GVIALCIEDGSIHRIRAK-NTVVATGGYGR---------TYFSCTSAHTSTGDGTAMITRAGLPCQD--LEFVQFHPTGI 252
Cdd:pfam00890 172 GAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 253 YG----AGCLItEGCRGEGGILINSQGERFMeryapvaKDLASRDVVSRSMT-LEIREGRGcgpekDHVYLQLHH-LPPE 326
Cdd:pfam00890 252 VGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-----ANVYLDASGsLDAE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 327 QLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHvngQDQIVPGLYACGEAACASVHGANRLGA 406
Cdd:pfam00890 319 GLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLDA---DGQPIPGLYAAGEVACGGVHGANRLGG 395
|
...
gi 661567360 407 NSL 409
Cdd:pfam00890 396 NSL 398
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
109-554 |
4.23e-88 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 285.45 E-value: 4.23e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 109 GMPFSRTEDGKIYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY-FALDLLM-ENGE---C 183
Cdd:PLN02815 122 GASFDHGEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTsQDGGsivC 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 184 RGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------ 257
Cdd:PLN02815 194 HGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpak 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 ------LITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRgcgpEKdHVYLQLHHLPPEQLATR 331
Cdd:PLN02815 274 arenafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPREEILSH 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 332 LPGISETAMIFaGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGANRLGANSLLD 411
Cdd:PLN02815 348 FPNIAAECLKR-GLDITKQPIPVVPAAHYMCGGVRTGLQGET---------NVQGLYAAGEVACTGLHGANRLASNSLLE 417
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 412 LVVFG-RACALSIE-------ESCRPGDKVPPIKPNAGEESVMNlDKLRFadgsirTSELRLSMQKSMQNHAAVFRVGSV 483
Cdd:PLN02815 418 ALVFArRAVQPSIDhmaralrDVSAAAAWARPVAPTALADSVMD-EILEW------TAVVRKELQRIMWNYVGIVRSTER 490
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 661567360 484 LQEGCGKISKLYGDLKHlKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRID 554
Cdd:PLN02815 491 LETAERKLEELEAEWEA-ILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
104-549 |
1.05e-87 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 285.39 E-value: 1.05e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 104 QLENYGMPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGR--SLRYDTSY-----------FVE 170
Cdd:PRK07803 100 ELETYGALFDRTKDGRISQRNFGGHTYP--------RLAHVGDRTGLELIRTLQQKivSLQQEDHAelgdyearikvFAE 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 171 YFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPT 250
Cdd:PRK07803 172 CTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGATLINMEFVQFHPT 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 251 GIYGA----GCLITEGCRGEGGILINSQGERFMERYAP-VAK------------------------DLASRDVVSRSMTL 301
Cdd:PRK07803 252 GMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdVFKgqyaeteeeadrwykdndnnrrppELLPRDEVARAINS 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 302 EIREGRGcgpeKDH--VYLQLH-HLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNykgqvlrhVN 378
Cdd:PRK07803 332 EVKAGRG----SPHggVYLDIAsRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGVEVD--------PD 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 379 GQDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESV-MNLDKLRFADGS 457
Cdd:PRK07803 400 TGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAVDAAArEALAPFERPAGA 478
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 458 IRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKT-----FDRGmvWNTdlveTLELQNLMLCALQTIY 532
Cdd:PRK07803 479 ENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVeghrqYNPG--WHL----ALDLRNMLLVSECVAR 552
|
490
....*....|....*..
gi 661567360 533 GAEARKESRGAHAREDY 549
Cdd:PRK07803 553 AALERTESRGGHTRDDH 569
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
103-549 |
3.20e-82 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 267.05 E-value: 3.20e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 103 AQLENYGMPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLMENG 181
Cdd:TIGR00551 89 QFLVSHGVTFDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARsEPNVNIIEGEFALDLLIETG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 182 ECRGViaLCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---L 258
Cdd:TIGR00551 161 RCAGV--FVQGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 259 ITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGrgcgpEKDHVYLQLHHLPPeqLATRLPGISET 338
Cdd:TIGR00551 239 ITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAV 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 339 aMIFAGVDVTKEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRA 418
Cdd:TIGR00551 311 -CRGAGIDPEREPIPVAPGAHYTMGGISVD--------AFGRTTI-PGLYAIGETACTGLHGANRLASNSLLECLVFGLR 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 419 CALSIeesCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLsmqkSMQNHAAVFRVGSVLQEGCGKISKlygdl 498
Cdd:TIGR00551 381 AARTI---SREPPYASREYQSGVWDEPRSENPLDRHELQHKMSSLRS----VLWNHAGIVRLEWSLREALRKLVE----- 448
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 661567360 499 khlktfdrgmvWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:TIGR00551 449 -----------IQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
105-549 |
2.17e-78 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 257.53 E-value: 2.17e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 105 LENYGMPFSRTEDGKIyqrAFGGQSlkfgkggqAH---RCCCVA-DRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLME 179
Cdd:PRK07512 98 LLRLGVPFDRDADGRL---ALGLEA--------AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVD 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 180 NGECRGViaLCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGaGC-- 257
Cdd:PRK07512 167 DGAVAGV--LAATAGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDI-GRdp 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 --LITEGCRGEGGILINSQGERFMERYAPvAKDLASRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLPPEQLATRLPGI 335
Cdd:PRK07512 244 apLATEALRGEGAILINEDGERFMADIHP-GAELAPRDVVARAVFAEIAAGRG-------AFLDARAALGAHFATRFPTV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 336 SEtAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQvlrhvngqdQIVPGLYACGEAACASVHGANRLGANSLLDLVVF 415
Cdd:PRK07512 316 YA-ACRSAGIDPARQPIPVAPAAHYHMGGIAVDADGR---------SSLPGLWAAGEVASTGLHGANRLASNSLLEAVVF 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 416 GRACALSIEESCRPGdKVPPIKPNAGEESVMNLDKLRfadgsirtselrlsmqKSMQNHAAVFRVGSVLQEGCGKIskly 495
Cdd:PRK07512 386 AARAAEDIAGTPAAA-AAPLSAAAAPALDPADLALLR----------------PIMSRHVGVLRDADGLRRAIAAL---- 444
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 661567360 496 gdlkhlktfdrgmvwntdlvETLE-----LQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:PRK07512 445 --------------------LPLEagagpAADPATVALLIAVAALAREESRGAHFRTDF 483
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
104-549 |
3.80e-78 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 256.84 E-value: 3.80e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 104 QLENYGMPFSRTEDGKiyqrafggqsLKFGKGGqAHRCCCV----ADRTGHSLLHTLYGRSLRYDTsyFVEY-FALDLLM 178
Cdd:PRK08071 91 ELIENGMPFDGDETGP----------LHLGKEG-AHRKRRIlhagGDATGKNLLEHLLQELVPHVT--VVEQeMVIDLII 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 179 ENGECRGVIALcIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAG-C 257
Cdd:PRK08071 158 ENGRCIGVLTK-DSEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrC 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 --LITEGCRGEGGILINSQGERFMERYAPVaKDLASRDVVSRSMTLEIREGrgcgpekDHVYLQLHHLPpeQLATRLPGI 335
Cdd:PRK08071 237 vgLVSEAVRGEGAVLINEDGRRFMMGIHPL-ADLAPRDVVARAIHEELLSG-------EKVYLNISSIQ--NFEERFPTI 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 336 seTAMI-FAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLVV 414
Cdd:PRK08071 307 --SALCeKNGVDIETKRIPVVPGAHFLMGGVKTNLDGET---------SIPGLYAIGEVACTGVHGANRLASNSLLEGLV 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 415 FGRACALSIEESCRPGDKVPPIKPNAGEESVMNL-DKlrfadgsirtSELrlsmQKSMQNHAAVFRVGSVLQEgcgkisk 493
Cdd:PRK08071 376 FGKRAAEHILTKATKPRLNPFAEKEKKFIVLNHLpTK----------EEI----QEKMMKYVGIVRTEQSLSE------- 434
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 494 lygdLKH-LKTFD-RGMVWNTD--LVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:PRK08071 435 ----AKRwLEKYGvRNMILDHDalTNEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDY 490
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
145-579 |
2.50e-77 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 255.74 E-value: 2.50e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 145 ADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLM--ENGECRGViaLCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSA 221
Cdd:PRK07395 129 ADTTGRAIVTTLTEQVLqRPNIEIISQALALSLWLepETGRCQGI--SLLYQGQITWLRAGAVILATGGGGQVFAQTTNP 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 222 HTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGILINSQGERFMERYAPvAKDLASRDVVSRS 298
Cdd:PRK07395 207 AVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRA 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 299 MTLEIREgRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKEPIPVLPTVHYNMGGIPTNykgqvlrhVN 378
Cdd:PRK07395 286 IFSHLQK-TATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTD--------LN 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 379 GQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACA---LSIEESCRPGDKVPPIKPNAGEESvMNLDKLRfad 455
Cdd:PRK07395 356 NQTSI-PGLYAVGETASTGVHGANRLASNSLLECLVFAAQLAqleLPIEPPASPDLPPISFIIDASQWK-NEQEQIQ--- 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 456 gsirtsELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLK--------------TFDRGMVwNTDLVETLELQ 521
Cdd:PRK07395 431 ------RIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPlsqflanlppgqtvSFNGPDA-EQQLRLWAETR 503
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 661567360 522 NLMLCALQTIYGAEARKESRGAHAREDYkvrideydyskPiqgqQKKPfeeHWRKHTL 579
Cdd:PRK07395 504 NLLDIAYLILKSALFRTESRGGHYRLDY-----------P----QTDP---AWQVHTL 543
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
109-549 |
5.12e-76 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 251.76 E-value: 5.12e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 109 GMPFSRTEDgkiyqrAFGGQSLKFGK-GGQAHR-CCCVADRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMEN----- 180
Cdd:PRK09077 101 GVPFTTDEQ------ANGEEGYHLTReGGHSHRrILHAADATGKAVQTTLVERARNHPNITVLErHNAIDLITSDklglp 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 181 -GECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC-- 257
Cdd:PRK09077 175 gRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArs 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 -LITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREgRGCgpekDHVYLQLHHLPPEQLATRLPGIS 336
Cdd:PRK09077 255 fLITEALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIY 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 337 ETAMIFaGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqDqiVPGLYACGEAACASVHGANRLGANSLLDLVVFG 416
Cdd:PRK09077 329 ERCLEL-GIDITKEPIPVVPAAHYTCGGVMVDLHGRT-------D--LDGLYAIGEVSYTGLHGANRMASNSLLECLVYG 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 417 RACALSIEESCRPGDKVPPIKP-------NAGEESVM--NLDKLRFA--D--GSIRTSElRLsmqksmqnHAAVFRVGSV 483
Cdd:PRK09077 399 RSAAEDILSRLPKAPMPPTLPAwdesrvtDSDEEVVIqhNWHELRLFmwDyvGIVRTTK-RL--------ERALHRIRLL 469
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 661567360 484 LQEgcgkISKLYGDLKhlktfdrgmVWNtDLvetLELQNLMLCALQTIYGAEARKESRGAHAREDY 549
Cdd:PRK09077 470 QQE----IDEYYANFR---------VSN-NL---LELRNLVQVAELIVRCAMERKESRGLHYTLDY 518
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
173-556 |
7.02e-68 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 230.24 E-value: 7.02e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 173 ALDLLM-ENGECRGVIALCIEDGS---IHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFH 248
Cdd:PRK07804 167 ALDLLTdGTGAVAGVTLHVLGEGSpdgVGAVHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFH 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 249 PTGIY-GAGC-----LITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREgRGcgpeKDHVYLQLHH 322
Cdd:PRK07804 247 PTVLFlGPAAggqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TG----DDHVYLDARG 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 323 LppEQLATRLPGISEtAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGAN 402
Cdd:PRK07804 321 I--EGFARRFPTITA-SCRAAGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT---------SVPGLYAAGEVACTGVHGAN 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 403 RLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMnldklrfadgsirTSELRLSMQKSMQNHAAVFRVGS 482
Cdd:PRK07804 389 RLASNSLLEGLVVGERAGAAAAAHAAAAGRPRATPAVGPEPGLL-------------PALDRAELQRAMTRGAGVLRSAA 455
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 661567360 483 VLQEGCGKISKLYGdlkhlKTFDRGmvwntdlVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEY 556
Cdd:PRK07804 456 GLARAADRLAAGAP-----ARVVPG-------RADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDEW 517
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
104-423 |
5.16e-65 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 219.56 E-value: 5.16e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 104 QLENYGMPFSRTEDGKIYQRAfGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE--YFaLDLLMENG 181
Cdd:PRK06175 91 KLIDMGLNFDKDEKELSYTKE-GAHSV--------NRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDN 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 182 ECRGviALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---- 257
Cdd:PRK06175 161 TCIG--AICLKDNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkk 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 -LITEGCRGEGGILINSQGERFMeryapvaKDLASRDVVSRSMTLEIREgrgcgPEKDHVYLQLHHLPPEQLATRLPGIS 336
Cdd:PRK06175 239 fLISESVRGEGGKLLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIY 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 337 ETAMIfAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQV-LRHvngqdqivpgLYACGEAACASVHGANRLGANSLLDLVVF 415
Cdd:PRK06175 307 EECLK-RGIDITKDAIPVSPAQHYFMGGIKVDLNSKTsMKN----------LYAFGEVSCTGVHGANRLASNSLLEGLVF 375
|
....*...
gi 661567360 416 GRACALSI 423
Cdd:PRK06175 376 SKRGAEKI 383
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
464-616 |
9.18e-62 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 200.75 E-value: 9.18e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 464 RLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGA 543
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 661567360 544 HAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLneadcatVPPAIRSY 616
Cdd:pfam02910 81 HAREDYPERDD-----------------ENWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
104-616 |
5.28e-60 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 210.48 E-value: 5.28e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 104 QLENYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM- 178
Cdd:TIGR01811 91 LMDAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVv 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 179 ENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC- 257
Cdd:TIGR01811 163 DGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTw 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 -----LITEGCRGEGGI----------LINS--QGER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYL 318
Cdd:TIGR01811 243 qsklrLMSESLRNDGRIwtpkekndnrDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYL 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 319 QLHH----LPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKgqvlrhvngQDQIVPGLYACGEAA 394
Cdd:TIGR01811 323 DFSDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYD---------QMTNIPGLFAAGECD 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 395 cASVHGANRLGANSLLDLVVFGRACA-------LSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSM 467
Cdd:TIGR01811 394 -FSQHGANRLGANSLLSAIADGYFALpftipnyLGPELSSEDMPEDAPEFQAALAEEQERFDRLLKMRGDENPYYLHREL 472
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 468 QKSMQNHAAVFRVGSVLQEGCGKISKLYGDL-KHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAR 546
Cdd:TIGR01811 473 GEIMTENCGVSRNNEKLLKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFR 552
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 547 EDYKVRIDEYDYSkpiqgqqkkpfEEHWRKHTLSYVDVGTGKVTLEYRPVidktlneaDCATVPPAIRSY 616
Cdd:TIGR01811 553 PEFPTPDGEAERN-----------DEEFLKVTAWEFQGENDAPEFHYEEL--------DFELVPPRKRDY 603
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
105-616 |
1.60e-58 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 206.36 E-value: 1.60e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 105 LENYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-E 179
Cdd:PRK08641 96 LDRMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLdD 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 180 NGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC-- 257
Cdd:PRK08641 168 EGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlr 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 258 LITEGCRGEGG-ILINSQGER--FMERYAPVAKDLASRDVVSRsmtlEI-----REGRGCGPEkDHVYLQLHHLPPEQLA 329
Cdd:PRK08641 248 LMSESARGEGGrVWTYKDGKPwyFLEEKYPAYGNLVPRDIATR----EIfdvcvEQKLGINGE-NMVYLDLSHKDPKELD 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 330 TRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlrhvngqDQI--VPGLYACGEAAcASVHGANRLGAN 407
Cdd:PRK08641 323 IKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDY-----------DQMtnIPGLFAAGECD-YSYHGANRLGAN 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 408 SLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFA-----DGSIRTSELRLSMQKSMQNHAAVFRVGS 482
Cdd:PRK08641 391 SLLSAIYGGMVAGPNAVEYIKGLGKSADDVSSSVFEQALKQEQEKFDnilsmDGTENAYVLHKELGEWMTDNVTVVREND 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 483 VLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpi 562
Cdd:PRK08641 471 KLLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERND-------- 542
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 661567360 563 qgqqkkpfeEHWRKHTLSYVDVGTGKVTLEYRPVidktlneaDCATVPPAIRSY 616
Cdd:PRK08641 543 ---------ENWLKTTMATYTPEGEEPEFSYEDV--------DTSLIPPRKRDY 579
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
134-557 |
4.81e-50 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 180.38 E-value: 4.81e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 134 KGGQA-HRCCCVADRTGHSLLHTLYGRSLRYDTSyFVEYFALDLLMENGECRGVIAlcieDGSIHRIRAknTVVATGGYG 212
Cdd:PRK08401 103 EGGHSfPRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL----DGELLKFDA--TVIATGGFS 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 213 RTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC--LITEGCRGEGGILINSQGERFMeryapvaKDLA 290
Cdd:PRK08401 176 GLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAKLVTGDGERFV-------NELE 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 291 SRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLppEQLATRLPGISeTAMIFAGVDVTKEPIPVLPTVHYNMGGIPTN-- 368
Cdd:PRK08401 249 TRDIVARAIYRKMQEGKG-------VFLDATGI--EDFKRRFPQIY-AFLRKEGIDPSRDLIPVTPIAHYTIGGISVDtf 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 369 YKGQVlrhvngqdqivPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEEScRPGDKVPPIKPNAGEEsVMNL 448
Cdd:PRK08401 319 YRTGI-----------KNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISRE-RPKLREVKEPPYHGYE-LGDV 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 449 DKLRfadgsirtselrlsmqKSMQNHAAVFRVGSVLQEGCGKISKLYGDlKHLKTFDRGmvwntdlvetlelqnLMLCAL 528
Cdd:PRK08401 386 DSIR----------------EILWNHAGIVRSEESLREGLKKLEGIEAD-PRLKLLAKG---------------VLECAL 433
|
410 420
....*....|....*....|....*....
gi 661567360 529 qtiygaeARKESRGAHAREDYKVRIDEYD 557
Cdd:PRK08401 434 -------AREESRGAHYREDFPFMRKEFE 455
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
125-417 |
2.93e-34 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 135.55 E-value: 2.93e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 125 FGGQSLKfgkggQAHRCCCVAdRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALcIEDGSIHRIRAKN 203
Cdd:TIGR01813 111 LGGHSVP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVK-GKGKGIYIKAAKA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 204 TVVATGGYGR------TY------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTG-IYGAGCLITEGCRGEGGIL 270
Cdd:TIGR01813 184 VVLATGGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAIL 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 271 INSQGERFMEryapvakDLASRDVVSRsmtlEIREGRGCGP-----EKDHV-------YLQLHHLPP----EQLATRLpG 334
Cdd:TIGR01813 264 VNKTGERFMN-------ELATRDKVSD----AILAQPGKDAylifdDDVYKkakmvdnYYRLGVAYKgdslEELAKQF-G 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 335 ISETA----------------------MIFAGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVLrhvNGQDQIVPGLYA 389
Cdd:TIGR01813 332 IPAAAlkqtikdyngyvasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEVL---DANGKPIPGLFA 408
|
330 340
....*....|....*....|....*...
gi 661567360 390 CGEAAcASVHGANRLGANSLLDLVVFGR 417
Cdd:TIGR01813 409 AGEVT-GGVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
168-417 |
1.03e-32 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 131.88 E-value: 1.03e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 168 FVEYFALDLLMENGECRGVIALcIEDGSIHRIRAKNTVVATGGYGRT------------YFSCTSAHTSTGDGTAMITRA 235
Cdd:PRK06481 208 FVNADVTKITEKDGKVTGVKVK-INGKETKTISSKAVVVTTGGFGANkdmiakyrpdlkGYVTTNQEGSTGDGIKMIEKL 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 236 GLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFM-----------------ERYAPVAKDLASRDvvsRS 298
Cdd:PRK06481 287 GGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKD---RV 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 299 MTLEIREGRGCGPEKDHV--YLQLHHLPPEQLATRLPGISE-------------TAMifaGVDVTKEP---IPVLPTVHY 360
Cdd:PRK06481 364 KAIAQYEEKGFVEEGKTIdeLAKKINVPAETLTKTLDTWNKavknkkdeafgrtTGM---DNDLSTGPyyaIKIAPGIHY 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 661567360 361 NMGGIPTNYKGQVLRHvngQDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 417
Cdd:PRK06481 441 TMGGVKINTNTEVLKK---DGSPITGLYAAGEVT-GGLHGENRIGGNSVADIIIFGR 493
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
109-549 |
4.01e-32 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 131.86 E-value: 4.01e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 109 GMPFSRTEDGKIYQRAFGG-Q-SLKFGKGGQahrcccvadrTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLMENGE 182
Cdd:PRK07573 133 GVPFAREYGGLLANRSFGGaQvSRTFYARGQ----------TGQQLLLGAYQALSRQIAAGTVKMYTrtemLDLVVVDGR 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 183 CRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTStgDGTAmITRA-------GLPCqdleFVQFHPTGIYGA 255
Cdd:PRK07573 203 ARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGS--NATA-IWRAhkkgayfANPC----FTQIHPTCIPVS 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 256 G------CLITEGCRGEGGILINSQ------------GER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDH 315
Cdd:PRK07573 276 GdyqsklTLMSESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLG 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 316 VYLQL----HHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlrhvNGQDQIvPGLYACG 391
Cdd:PRK07573 356 VYLDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDY--------NLMSTI-PGLFVIG 426
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 392 EAACaSVHGANRLGANSLLdlvvfgRACA-------LSIEESCRPGDKVPPIKPN-----AGEESVMN-LDKLRFADGSI 458
Cdd:PRK07573 427 EANF-SDHGANRLGASALM------QGLAdgyfvlpYTIGNYLADTIGTPKVSTDhpefkEAEAEVQDrIDRLLNIKGKR 499
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 459 RTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDL-KHLKTFDRGMVWNTDL------VETLELQNLMlcalqtI 531
Cdd:PRK07573 500 TVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELekagrvADFLELGELM------C 573
|
490
....*....|....*...
gi 661567360 532 YGAEARKESRGAHAREDY 549
Cdd:PRK07573 574 RDALHREESCGGHFREEH 591
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
101-598 |
2.13e-20 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 95.37 E-value: 2.13e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 101 VAAQLENYGMPFSRTEDGKiYQRAfG-------GQSLKfgkggqahrcCCVADRTGHSLLHTLYGRSlrydtsyfveyFA 173
Cdd:PRK06854 100 VVHLFEEWGLPIWKDENGK-YVRR-GrwqiminGESYK----------PIVAEAAKKALGDNVLNRV-----------FI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 174 LDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGG----YgRTYFSCTSAHT------STGDGTAMITRAG--LPCQD 241
Cdd:PRK06854 157 TDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiY-RPRSPGEGRGRmwyppfNTGSGYAMGIRAGaeMTTFE 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 242 LEFVQFH------PTGIYGAGCliteGCRgeggiLINSQGERFMERYAPVAKDLASRDVVSR--------SMTLEIREGR 307
Cdd:PRK06854 236 NRFIPLRfkdgygPVGAWFLLF----KAK-----AVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEENKAGR 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 308 gcGPekdhVYLQLHH-LPPEQLATRL--------PGIsetAMIFAGVDV--TKEPIPVLPTVHYNMGGiptnYKGQVLRH 376
Cdd:PRK06854 307 --GP----IYMDTEEaLQDKHLESELwedfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIVGS----HSGASGYW 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 377 VNGQDQI--------------VPGLYACGEAACASVH----GAnrlganslldlVVFGRACALSIEESCRPG-DKVPPIK 437
Cdd:PRK06854 374 VSGPEDWvpeeykwgynrmttVEGLFAAGDVVGGSPHkfssGS-----------FAEGRIAAKAAVRYILDNkDEKPEID 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 438 PNAGEESVMNLDK-----LRFADGS---------IRTSELRLSMQKSMQNHAAVFRV-----GSVLQEGCGKISKLYGDL 498
Cdd:PRK06854 443 DDQIEELKKEIYApleryEEFKDYStdpdvnpnyISPEQLEERLQKIMDEYAGGISTnyttnEKLLEIALELLEMLEEDS 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 499 KHLKTFDrgmvwNTDLVETLELQNLMLCALQTIYGAEARKESR--GAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRK 576
Cdd:PRK06854 523 EKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDD-----------------ENWKC 580
|
570 580
....*....|....*....|..
gi 661567360 577 HTLSYVDVGTGKVTLEYRPVID 598
Cdd:PRK06854 581 FVNSRYDPGTGEWTIRKLPYYQ 602
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
193-417 |
3.46e-17 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 85.99 E-value: 3.46e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 193 DGSIHRIRAKNTVVATGGYG---------RTY------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYG--- 254
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 255 ----AGCLITEGCRGEGGILINSQGERFMeryapvaKDLASRDVVSRSMTLEIRE----------------------GR- 307
Cdd:PTZ00306 681 psnrTKYLGPEALRGSGGVLLNKNGERFV-------NELDLRSVVSQAIIAQGNEypgsggskfaycvlneaaaklfGKn 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 308 -------------------------GCGPEKDHVYL-QLHHLPPEQLATRLPGisetAMIFAGVDVTKEPIPV---LPTV 358
Cdd:PTZ00306 754 slgfywkrlglfqrvddvkglakliGCPVENLHRTLeTYERLSTKKVACPLTG----KVVFPCVVGTQGPYYVafvTPSI 829
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 661567360 359 HYNMGGIPTNYKGQVLRHVNGQDQI-----VPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 417
Cdd:PTZ00306 830 HYTMGGCLISPSAEMQMEDNSVNIFedrrpILGLFGAGEVT-GGVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
96-596 |
6.65e-15 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 77.79 E-value: 6.65e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 96 TRSHTVAAQLENYGMPFSRTEDG-----KIYQraFGGQSLKFgkggqahrcccvadRTGHSLLHTLYGRSLRYDTSYFVE 170
Cdd:PRK08275 94 EHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKVLYRQLKRARVLITNR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 171 YFALDLLMEN-GECRGVIALCIEDGSIHRIRAKNTVVATGGYGR-----------TYFSCTSAhtstGDGTAMITRAGLP 238
Cdd:PRK08275 158 IMATRLLTDAdGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA----GDGYAMAYHAGAE 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 239 CQDLEFVQFHP--TGIYGAGCLITEGcrGEGGILINSQGERFMERYAPvakdlasrdvvSRSMTLEI-RE-GRGCGPekd 314
Cdd:PRK08275 234 LANLECFQINPliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWEFyQElQSGNGP--- 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 315 hVYLQLHHLPPEQlatrlpgISETAMIF--------------AGVDVTKEPIP-VLPTVHYNMG----GIPTNYKGQVlr 375
Cdd:PRK08275 298 -VFLKLDHLAEET-------IQTIETILhtnerpsrgrfhegRGTDYRQQMVEmHISEIGFCSGhsasGVWVNEKAET-- 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 376 hvngqdqIVPGLYACGEAACasvhganrLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFAD 455
Cdd:PRK08275 368 -------TVPGLYAAGDMAS--------VPHNYMLGAFTYGWFAGENAAEYVAGRDLPEVDAAQVEAERARVLAPLHRED 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 456 GsIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDrgmvWNtDLVETLELQNLMLCALQTIYGAE 535
Cdd:PRK08275 433 G-LPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH-ELMRALEVSSIRDCAEMAARASL 506
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 661567360 536 ARKESRGA--HAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVgTGKVTLEYRPV 596
Cdd:PRK08275 507 FRTESRWGlyHYRVDFPERND-----------------AEWFCHTHLRKDE-DGRMVSFKRPV 551
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
96-395 |
5.65e-09 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 59.09 E-value: 5.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 96 TRSHTVAAQLENYGMPFSRTEDGKIYQRAF---GGQSLKFGKGGQAHRcccvadrtghSLLHTLYGRSLRYDTSYFVEYF 172
Cdd:PRK13800 96 TRGFAMVQRLERYGVKFEKDEHGEYAVRRVhrsGSYVLPMPEGKDVKK----------ALYRVLRQRSMRERIRIENRLM 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 173 ALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGR-----------TYFSCTSAhtstGDGTAMITRAGLPCQD 241
Cdd:PRK13800 166 PVRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRlglpasgylygTYENPTNA----GDGYSMAYHAGAELSG 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 242 LEFVQFHP--TGIYGAGCLITegCRGEGGILINSQGERFmeryapVAKDLASRDVVSRsMTLEIREGRgcGPekdhVYLQ 319
Cdd:PRK13800 242 IECFQINPliKDYNGPACAYV--ANPFGGYQVNAQGERF------VDSDYWSGQMMAE-VKREIESAR--GP----IYLK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 320 LHHLPPEQLATrLPGISETamifagvdvTKEpiPVLPTVHYNMG---------------GIPTNYKGQVLRHVNGQDQIV 384
Cdd:PRK13800 307 VSHLPEETLSA-LESILHT---------TER--PTRGTFHANRGhdyrthdiemhiseiGLCSGHSASGVWVDEHARTTV 374
|
330
....*....|.
gi 661567360 385 PGLYACGEAAC 395
Cdd:PRK13800 375 PGLYAAGDLAC 385
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
149-434 |
2.21e-06 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 50.52 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 149 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAlcIEDGSIHRIRAKNTV-VATGGYGR------------TY 215
Cdd:PRK12844 207 GAALIGRMLEAALAAGVPLWTNTPLTELIVEDGRVVGVVV--VRDGREVLIRARRGVlLASGGFGHnaemrkryqpqpNS 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 216 FSCTSAHTS-TGDG--TAMITRAGLPCQDLEF---VQFHPTGIYGAGCLITEGCRgEGGILINSQGERFMER---YAPVA 286
Cdd:PRK12844 285 GDWTNANPGdTGEVieAAMRLGAALDLMDEAWwvpGAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEVG 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 287 KDLASRDVVSRSMTLEIREGR---------GCGPEK--DHVYLQ----------LHHLPPEQLAT---RLPGISETamif 342
Cdd:PRK12844 364 RAMYAQDAVPAWMIMDSRYRKrylfgtippGPTPQEwlDSGYMKradtieelagKTGIDPAGLAAtveRFNGFAAT---- 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 661567360 343 aGVDV----------------TKEPIPVLPTV----HYNM----------GGIPTNYKGQVLRHvngQDQIVPGLYACGE 392
Cdd:PRK12844 440 -GTDPdfhrgesaydryygdpTNKPNPSLGPLdkppFYAVrmvpgdvgtsGGLLTDEHARVLRE---DGSVIPGLYATGN 515
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 661567360 393 AAcASVHGANRLGAN-SLLDLVVFGRACALSIEEScRPGDKVP 434
Cdd:PRK12844 516 CT-ASVMGRTYPGAGaSIGNSFVFGYIAALHAAGA-RSADPPP 556
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
362-404 |
4.15e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 43.35 E-value: 4.15e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 661567360 362 MGGIPTNYKGQVLRhvnGQDQIVPGLYACGEAA---CASVHGANRL 404
Cdd:PRK12834 485 LGGLETDLDSRVLG---ADGTPLPGLYAAGEAAgfgGGGVHGYNAL 527
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
362-404 |
5.59e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.86 E-value: 5.59e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 661567360 362 MGGIPTNYKGQVLRHvngQDQIVPGLYACGEAA---CASVHGANRL 404
Cdd:COG3573 486 LGGLQTDLDSRVLDA---DGQPIPGLYAAGEAAgfgGGGVHGYRAL 528
|
|
| |
