fibronectin isoform 11 precursor [Homo sapiens]
List of domain hits
Name | Accession | Description | Interval | E-value | ||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 7.44e-24 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 95.83 E-value: 7.44e-24
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FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 3.71e-23 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. : Pssm-ID: 128373 Cd Length: 49 Bit Score: 93.90 E-value: 3.71e-23
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fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.77e-21 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.77e-21
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1844 | 1.96e-18 | ||||||||
Fibronectin type 3 domain [General function prediction only]; : Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 91.99 E-value: 1.96e-18
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1814-1894 | 2.12e-17 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. : Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.08 E-value: 2.12e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.48e-17 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.48e-17
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 3.55e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; : Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 84.67 E-value: 3.55e-16
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 3.27e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 3.27e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 4.05e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 4.05e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2060-2104 | 6.59e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.46 E-value: 6.59e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2105-2146 | 7.78e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.07 E-value: 7.78e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 9.88e-15 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 9.88e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.85e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.30 E-value: 1.85e-14
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fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 2.11e-14 | ||||||||
Fibronectin type I domain; : Pssm-ID: 459644 Cd Length: 40 Bit Score: 68.88 E-value: 2.11e-14
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FN3 super family | cl27307 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 4.10e-14 | ||||||||
Fibronectin type 3 domain [General function prediction only]; The actual alignment was detected with superfamily member COG3401: Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.12 E-value: 4.10e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.41e-13 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.61 E-value: 1.41e-13
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 3.34e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.34e-12
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 5.34e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. : Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.37 E-value: 5.34e-12
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2148-2187 | 1.40e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.40e-11
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fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.30e-11 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.30e-11
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.34e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.11 E-value: 1.34e-10
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fn3 | pfam00041 | Fibronectin type III domain; |
1960-2032 | 7.18e-07 | ||||||||
Fibronectin type III domain; : Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.18e-07
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 8.75e-06 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. : Pssm-ID: 238018 Cd Length: 43 Bit Score: 44.63 E-value: 8.75e-06
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Name | Accession | Description | Interval | E-value | ||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 7.44e-24 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 95.83 E-value: 7.44e-24
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FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 3.71e-23 | ||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 93.90 E-value: 3.71e-23
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FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
354-401 | 3.10e-22 | ||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.21 E-value: 3.10e-22
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FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
414-461 | 3.62e-22 | ||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.21 E-value: 3.62e-22
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fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.77e-21 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.77e-21
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fn2 | pfam00040 | Fibronectin type II domain; |
360-401 | 3.02e-20 | ||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 85.70 E-value: 3.02e-20
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1844 | 1.96e-18 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 91.99 E-value: 1.96e-18
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fn2 | pfam00040 | Fibronectin type II domain; |
420-461 | 2.31e-18 | ||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 80.31 E-value: 2.31e-18
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1814-1894 | 2.12e-17 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.08 E-value: 2.12e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.48e-17 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.48e-17
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fn3 | pfam00041 | Fibronectin type III domain; |
1543-1623 | 1.93e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 76.30 E-value: 1.93e-16
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 3.55e-16 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 84.67 E-value: 3.55e-16
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fn3 | pfam00041 | Fibronectin type III domain; |
1814-1894 | 5.52e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.52e-16
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fn3 | pfam00041 | Fibronectin type III domain; |
1359-1438 | 5.69e-16 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.69e-16
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1449-1531 | 1.76e-15 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 73.68 E-value: 1.76e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 3.27e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 3.27e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 4.05e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 4.05e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2060-2104 | 6.59e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.46 E-value: 6.59e-15
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2105-2146 | 7.78e-15 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.07 E-value: 7.78e-15
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fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 9.88e-15 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 9.88e-15
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1543-1631 | 1.82e-14 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.99 E-value: 1.82e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.85e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.30 E-value: 1.85e-14
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fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 2.11e-14 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 68.88 E-value: 2.11e-14
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
231-275 | 2.32e-14 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 68.92 E-value: 2.32e-14
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
811-899 | 2.56e-14 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.60 E-value: 2.56e-14
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 4.10e-14 | ||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.12 E-value: 4.10e-14
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1268-1347 | 1.26e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 68.02 E-value: 1.26e-13
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fn3 | pfam00041 | Fibronectin type III domain; |
908-988 | 1.37e-13 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.21 E-value: 1.37e-13
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.41e-13 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.61 E-value: 1.41e-13
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1268-1349 | 1.96e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.91 E-value: 1.96e-13
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fn1 | pfam00039 | Fibronectin type I domain; |
470-508 | 2.09e-13 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 66.18 E-value: 2.09e-13
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fn1 | pfam00039 | Fibronectin type I domain; |
561-599 | 3.98e-13 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 65.41 E-value: 3.98e-13
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1438 | 3.99e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.14 E-value: 3.99e-13
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
559-602 | 7.40e-13 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 64.66 E-value: 7.40e-13
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1451-1527 | 9.38e-13 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.71 E-value: 9.38e-13
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
186-225 | 1.28e-12 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.87 E-value: 1.28e-12
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1814-1892 | 1.45e-12 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 64.94 E-value: 1.45e-12
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2060-2099 | 1.97e-12 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.10 E-value: 1.97e-12
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 3.34e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.34e-12
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
97-135 | 4.90e-12 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 62.33 E-value: 4.90e-12
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 5.34e-12 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.37 E-value: 5.34e-12
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
811-889 | 7.94e-12 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 63.02 E-value: 7.94e-12
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2148-2187 | 1.40e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.40e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
95-136 | 1.51e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.51e-11
|
||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
910-995 | 1.87e-11 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.13 E-value: 1.87e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2058-2102 | 2.03e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.42 E-value: 2.03e-11
|
||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.30e-11 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.30e-11
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2105-2142 | 3.16e-11 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 60.02 E-value: 3.16e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
184-227 | 7.89e-11 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.88 E-value: 7.89e-11
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.34e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.11 E-value: 1.34e-10
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1543-1621 | 1.80e-10 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.80e-10
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1359-1437 | 1.89e-10 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.89e-10
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
141-179 | 2.26e-10 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 57.32 E-value: 2.26e-10
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2149-2189 | 4.14e-10 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 56.98 E-value: 4.14e-10
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
468-508 | 4.50e-10 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 56.57 E-value: 4.50e-10
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
524-555 | 6.00e-10 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 56.17 E-value: 6.00e-10
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2104-2145 | 1.20e-09 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.42 E-value: 1.20e-09
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
229-273 | 2.11e-09 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 54.65 E-value: 2.11e-09
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
52-92 | 6.04e-09 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 53.51 E-value: 6.04e-09
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
139-181 | 1.70e-08 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.33 E-value: 1.70e-08
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
516-558 | 2.13e-08 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 51.95 E-value: 2.13e-08
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
908-986 | 2.40e-08 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.40e-08
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2149-2184 | 8.74e-08 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 50.00 E-value: 8.74e-08
|
||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
52-87 | 2.09e-07 | ||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 48.85 E-value: 2.09e-07
|
||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1960-2032 | 7.18e-07 | ||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.18e-07
|
||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 8.75e-06 | ||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 44.63 E-value: 8.75e-06
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
616-688 | 1.23e-05 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.30 E-value: 1.23e-05
|
||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
308-347 | 1.68e-05 | ||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 43.88 E-value: 1.68e-05
|
||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
628-678 | 1.30e-04 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.30e-04
|
||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1962-2028 | 5.76e-03 | ||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.98 E-value: 5.76e-03
|
||||||||||||
Name | Accession | Description | Interval | E-value | |||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
353-401 | 7.44e-24 | |||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 95.83 E-value: 7.44e-24
|
|||||||||||||
FN2 | smart00059 | Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, ... |
413-461 | 3.71e-23 | |||||||||
Fibronectin type 2 domain; One of three types of internal repeat within the plasma protein, fibronectin. Also occurs in coagulation factor XII, 2 type IV collagenases, PDC-109, and cation-independent mannose-6-phosphate and secretory phospholipase A2 receptors. In fibronectin, PDC-109, and the collagenases, this domain contributes to collagen-binding function. Pssm-ID: 128373 Cd Length: 49 Bit Score: 93.90 E-value: 3.71e-23
|
|||||||||||||
FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
354-401 | 3.10e-22 | |||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.21 E-value: 3.10e-22
|
|||||||||||||
FN2 | cd00062 | Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to ... |
414-461 | 3.62e-22 | |||||||||
Fibronectin Type II domain: FN2 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. Fibronectin is composed of 3 types of modules, FN1,FN2 and FN3. The collagen binding domain contains four FN1 and two FN2 repeats. Pssm-ID: 238019 Cd Length: 48 Bit Score: 91.21 E-value: 3.62e-22
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1449-1530 | 5.77e-21 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 89.01 E-value: 5.77e-21
|
|||||||||||||
fn2 | pfam00040 | Fibronectin type II domain; |
360-401 | 3.02e-20 | |||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 85.70 E-value: 3.02e-20
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1401-1844 | 1.96e-18 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 91.99 E-value: 1.96e-18
|
|||||||||||||
fn2 | pfam00040 | Fibronectin type II domain; |
420-461 | 2.31e-18 | |||||||||
Fibronectin type II domain; Pssm-ID: 459645 Cd Length: 42 Bit Score: 80.31 E-value: 2.31e-18
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1814-1894 | 2.12e-17 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 79.08 E-value: 2.12e-17
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1268-1349 | 4.48e-17 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 77.84 E-value: 4.48e-17
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1543-1623 | 1.93e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 76.30 E-value: 1.93e-16
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1058-1538 | 3.55e-16 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 84.67 E-value: 3.55e-16
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1814-1894 | 5.52e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.52e-16
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1359-1438 | 5.69e-16 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 74.76 E-value: 5.69e-16
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1511-1885 | 1.33e-15 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 82.74 E-value: 1.33e-15
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1449-1531 | 1.76e-15 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 73.68 E-value: 1.76e-15
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1633-1713 | 1.96e-15 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 73.22 E-value: 1.96e-15
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1167-1713 | 2.42e-15 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 81.97 E-value: 2.42e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
186-230 | 3.27e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 3.27e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
561-604 | 4.05e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 71.23 E-value: 4.05e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2060-2104 | 6.59e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.46 E-value: 6.59e-15
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2105-2146 | 7.78e-15 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 70.07 E-value: 7.78e-15
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
812-883 | 9.88e-15 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 71.29 E-value: 9.88e-15
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1543-1631 | 1.82e-14 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.99 E-value: 1.82e-14
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
470-508 | 1.85e-14 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 69.30 E-value: 1.85e-14
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
231-270 | 2.11e-14 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 68.88 E-value: 2.11e-14
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
231-275 | 2.32e-14 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 68.92 E-value: 2.32e-14
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
811-899 | 2.56e-14 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 70.60 E-value: 2.56e-14
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
711-1034 | 4.10e-14 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 78.12 E-value: 4.10e-14
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1725-1804 | 8.44e-14 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.60 E-value: 8.44e-14
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1268-1347 | 1.26e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 68.02 E-value: 1.26e-13
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
908-988 | 1.37e-13 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 68.21 E-value: 1.37e-13
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
518-560 | 1.41e-13 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 66.61 E-value: 1.41e-13
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1268-1349 | 1.96e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.91 E-value: 1.96e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
470-508 | 2.09e-13 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 66.18 E-value: 2.09e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
561-599 | 3.98e-13 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 65.41 E-value: 3.98e-13
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1359-1438 | 3.99e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 67.14 E-value: 3.99e-13
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
559-602 | 7.40e-13 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 64.66 E-value: 7.40e-13
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
998-1076 | 8.26e-13 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 65.90 E-value: 8.26e-13
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1451-1527 | 9.38e-13 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 65.71 E-value: 9.38e-13
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
186-225 | 1.28e-12 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.87 E-value: 1.28e-12
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1814-1892 | 1.45e-12 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 64.94 E-value: 1.45e-12
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2060-2099 | 1.97e-12 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 63.10 E-value: 1.97e-12
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
727-798 | 3.02e-12 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 64.36 E-value: 3.02e-12
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
97-140 | 3.34e-12 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.75 E-value: 3.34e-12
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
97-135 | 4.90e-12 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 62.33 E-value: 4.90e-12
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
141-184 | 5.34e-12 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 62.37 E-value: 5.34e-12
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
1175-1258 | 6.34e-12 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 63.20 E-value: 6.34e-12
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
811-889 | 7.94e-12 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 63.02 E-value: 7.94e-12
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
998-1084 | 1.34e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.51 E-value: 1.34e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2148-2187 | 1.40e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.40e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
95-136 | 1.51e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.81 E-value: 1.51e-11
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
910-995 | 1.87e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 62.13 E-value: 1.87e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2058-2102 | 2.03e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 60.42 E-value: 2.03e-11
|
|||||||||||||
fn3 | pfam00041 | Fibronectin type III domain; |
619-688 | 2.30e-11 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 61.66 E-value: 2.30e-11
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
2105-2142 | 3.16e-11 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 60.02 E-value: 3.16e-11
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
808-1390 | 3.97e-11 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 68.49 E-value: 3.97e-11
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1633-1720 | 5.26e-11 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 60.97 E-value: 5.26e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
184-227 | 7.89e-11 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.88 E-value: 7.89e-11
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
52-89 | 1.34e-10 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 58.11 E-value: 1.34e-10
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1543-1621 | 1.80e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.80e-10
|
|||||||||||||
FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1359-1437 | 1.89e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 59.17 E-value: 1.89e-10
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
141-179 | 2.26e-10 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 57.32 E-value: 2.26e-10
|
|||||||||||||
FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
1621-1886 | 3.49e-10 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 65.41 E-value: 3.49e-10
|
|||||||||||||
FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
2149-2189 | 4.14e-10 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 56.98 E-value: 4.14e-10
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
468-508 | 4.50e-10 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 56.57 E-value: 4.50e-10
|
|||||||||||||
COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
711-1018 | 5.90e-10 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 64.97 E-value: 5.90e-10
|
|||||||||||||
fn1 | pfam00039 | Fibronectin type I domain; |
524-555 | 6.00e-10 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 56.17 E-value: 6.00e-10
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1175-1264 | 8.22e-10 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 57.51 E-value: 8.22e-10
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
2104-2145 | 1.20e-09 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 55.42 E-value: 1.20e-09
|
|||||||||||||
FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
229-273 | 2.11e-09 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 54.65 E-value: 2.11e-09
|
|||||||||||||
FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1725-1805 | 4.90e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 55.58 E-value: 4.90e-09
|
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
998-1075 | 5.24e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 54.93 E-value: 5.24e-09
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
52-92 | 6.04e-09 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 53.51 E-value: 6.04e-09
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1633-1704 | 9.14e-09 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 54.16 E-value: 9.14e-09
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
139-181 | 1.70e-08 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 52.33 E-value: 1.70e-08
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
516-558 | 2.13e-08 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 51.95 E-value: 2.13e-08
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
908-986 | 2.40e-08 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.40e-08
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1175-1256 | 2.73e-08 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 53.00 E-value: 2.73e-08
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fn1 | pfam00039 | Fibronectin type I domain; |
2149-2184 | 8.74e-08 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 50.00 E-value: 8.74e-08
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fn1 | pfam00039 | Fibronectin type I domain; |
52-87 | 2.09e-07 | |||||||||
Fibronectin type I domain; Pssm-ID: 459644 Cd Length: 40 Bit Score: 48.85 E-value: 2.09e-07
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1725-1799 | 3.17e-07 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 49.92 E-value: 3.17e-07
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
727-809 | 3.58e-07 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 50.19 E-value: 3.58e-07
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fn3 | pfam00041 | Fibronectin type III domain; |
1960-2032 | 7.18e-07 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.95 E-value: 7.18e-07
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fn3 | pfam00041 | Fibronectin type III domain; |
1092-1159 | 1.05e-06 | |||||||||
Fibronectin type III domain; Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 48.57 E-value: 1.05e-06
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1695-1883 | 2.17e-06 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 53.03 E-value: 2.17e-06
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FN3 | COG3401 | Fibronectin type 3 domain [General function prediction only]; |
615-981 | 5.15e-06 | |||||||||
Fibronectin type 3 domain [General function prediction only]; Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 51.54 E-value: 5.15e-06
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
727-791 | 7.84e-06 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 46.07 E-value: 7.84e-06
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FN1 | cd00061 | Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. ... |
307-345 | 8.75e-06 | |||||||||
Fibronectin type 1 domain, approximately 40 residue long with two conserved disulfide bridges. FN1 is one of three types of internal repeats which combine to form larger domains within fibronectin. Fibronectin, a plasma protein that binds cell surfaces and various compounds including collagen, fibrin, heparin, DNA, and actin, usually exists as a dimer in plasma and as an insoluble multimer in extracellular matrices. Dimers of nearly identical subunits are linked by a disulfide bond close to their C-terminus. FN1 domains also found in coagulation factor XII, HGF activator, and tissue-type plasminogen activator. In tissue plasminogen activator, FN1 domains may form functional fibrin-binding units with EGF-like domains C-terminal to FN1. Pssm-ID: 238018 Cd Length: 43 Bit Score: 44.63 E-value: 8.75e-06
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
616-688 | 1.23e-05 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 45.30 E-value: 1.23e-05
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1140-1541 | 1.63e-05 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 50.33 E-value: 1.63e-05
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FN1 | smart00058 | Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, ... |
308-347 | 1.68e-05 | |||||||||
Fibronectin type 1 domain; One of three types of internal repeat within the plasma protein, fibronectin. Found also in coagulation factor XII, HGF activator and tissue-type plasminogen activator. In t-PA and fibronectin, this domain type contributes to fibrin-binding. Pssm-ID: 214494 Cd Length: 45 Bit Score: 43.88 E-value: 1.68e-05
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1096-1161 | 4.18e-05 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 43.76 E-value: 4.18e-05
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
628-678 | 1.30e-04 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.30e-04
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1462-1815 | 1.81e-04 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 46.86 E-value: 1.81e-04
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FN3 | cd00063 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1096-1161 | 5.10e-04 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 5.10e-04
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1518-1823 | 9.17e-04 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 44.55 E-value: 9.17e-04
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COG4733 | COG4733 | Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1082-1250 | 1.40e-03 | |||||||||
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 44.17 E-value: 1.40e-03
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FN3 | smart00060 | Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1962-2028 | 5.76e-03 | |||||||||
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.98 E-value: 5.76e-03
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Blast search parameters | ||||
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